View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10438_low_22 (Length: 252)

Name: NF10438_low_22
Description: NF10438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10438_low_22
NF10438_low_22
[»] scaffold0384 (1 HSPs)
scaffold0384 (1-236)||(5756-5991)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-235)||(7968-8192)
[»] chr8 (30 HSPs)
chr8 (162-235)||(34846759-34846831)
chr8 (161-235)||(14666163-14666237)
chr8 (163-236)||(44893369-44893442)
chr8 (164-235)||(38922506-38922577)
chr8 (157-235)||(14846516-14846594)
chr8 (159-236)||(2467209-2467286)
chr8 (163-236)||(24938653-24938726)
chr8 (161-236)||(8141046-8141121)
chr8 (164-235)||(45521116-45521187)
chr8 (161-235)||(1013069-1013143)
chr8 (162-235)||(22810025-22810098)
chr8 (163-236)||(33401890-33401963)
chr8 (163-235)||(6100418-6100490)
chr8 (164-236)||(6940505-6940577)
chr8 (163-235)||(13085470-13085542)
chr8 (188-235)||(11785887-11785934)
chr8 (164-235)||(15884647-15884718)
chr8 (164-235)||(24837189-24837260)
chr8 (162-235)||(10927551-10927624)
chr8 (164-235)||(9860087-9860159)
chr8 (168-235)||(17981392-17981459)
chr8 (163-216)||(18091347-18091400)
chr8 (163-235)||(583760-583832)
chr8 (164-236)||(3418604-3418676)
chr8 (168-235)||(18373961-18374028)
chr8 (167-235)||(4479387-4479455)
chr8 (164-212)||(10535518-10535566)
chr8 (164-224)||(17845680-17845740)
chr8 (163-235)||(29933719-29933790)
chr8 (163-235)||(43027251-43027323)
[»] chr4 (42 HSPs)
chr4 (163-235)||(53599007-53599079)
chr4 (162-233)||(41339489-41339560)
chr4 (164-235)||(47078406-47078477)
chr4 (164-235)||(6779159-6779230)
chr4 (161-235)||(29895732-29895806)
chr4 (164-234)||(34667695-34667765)
chr4 (163-235)||(1446773-1446845)
chr4 (187-235)||(36145307-36145355)
chr4 (163-235)||(38075380-38075452)
chr4 (164-235)||(55920982-55921053)
chr4 (167-236)||(6032731-6032800)
chr4 (162-235)||(52950028-52950101)
chr4 (164-236)||(2559255-2559327)
chr4 (163-235)||(8888969-8889041)
chr4 (163-235)||(24166397-24166469)
chr4 (187-235)||(36262857-36262905)
chr4 (164-235)||(1940866-1940937)
chr4 (164-235)||(13073486-13073557)
chr4 (164-235)||(27531749-27531820)
chr4 (164-235)||(38165975-38166046)
chr4 (164-222)||(14567199-14567257)
chr4 (162-236)||(19651536-19651610)
chr4 (163-233)||(27248375-27248445)
chr4 (162-235)||(7000470-7000543)
chr4 (162-235)||(26480041-26480114)
chr4 (167-235)||(29588687-29588755)
chr4 (187-235)||(38168228-38168276)
chr4 (168-235)||(5472940-5473007)
chr4 (164-235)||(15732540-15732611)
chr4 (162-236)||(41162973-41163047)
chr4 (170-235)||(13552068-13552133)
chr4 (187-236)||(20532500-20532549)
chr4 (187-235)||(15840026-15840074)
chr4 (164-236)||(33647669-33647741)
chr4 (164-231)||(3574542-3574609)
chr4 (164-235)||(14123964-14124035)
chr4 (200-233)||(3159563-3159596)
chr4 (167-232)||(14858662-14858727)
chr4 (163-212)||(43458560-43458609)
chr4 (163-223)||(15829646-15829706)
chr4 (187-235)||(20128280-20128328)
chr4 (191-231)||(42722673-42722713)
[»] chr6 (26 HSPs)
chr6 (164-235)||(5253315-5253386)
chr6 (164-235)||(9179828-9179899)
chr6 (164-235)||(8612066-8612137)
chr6 (162-235)||(21016843-21016916)
chr6 (163-235)||(21898594-21898666)
chr6 (159-236)||(19230649-19230725)
chr6 (163-236)||(29333229-29333302)
chr6 (167-235)||(9147251-9147319)
chr6 (164-235)||(2271393-2271464)
chr6 (164-235)||(14107450-14107521)
chr6 (163-212)||(3030733-3030782)
chr6 (187-235)||(6606189-6606237)
chr6 (168-235)||(3588037-3588104)
chr6 (164-235)||(15643921-15643991)
chr6 (164-231)||(24671962-24672029)
chr6 (162-236)||(29444856-29444930)
chr6 (167-236)||(13036095-13036164)
chr6 (187-235)||(34954711-34954759)
chr6 (164-235)||(5759575-5759646)
chr6 (188-234)||(10311562-10311608)
chr6 (162-231)||(13468878-13468947)
chr6 (191-236)||(26476454-26476499)
chr6 (164-224)||(6600726-6600786)
chr6 (163-235)||(8932607-8932679)
chr6 (163-235)||(8938657-8938729)
chr6 (163-235)||(8944073-8944145)
[»] chr5 (41 HSPs)
chr5 (161-235)||(6767143-6767217)
chr5 (162-235)||(18136372-18136445)
chr5 (164-235)||(3654004-3654075)
chr5 (164-235)||(5732012-5732083)
chr5 (164-235)||(9812816-9812887)
chr5 (164-235)||(12704958-12705029)
chr5 (164-235)||(41163551-41163622)
chr5 (163-235)||(28856920-28856992)
chr5 (164-235)||(12766075-12766146)
chr5 (164-235)||(28857072-28857143)
chr5 (164-235)||(39728331-39728402)
chr5 (161-235)||(25417275-25417348)
chr5 (162-235)||(35403604-35403677)
chr5 (162-235)||(42086269-42086342)
chr5 (163-235)||(1538374-1538446)
chr5 (187-235)||(8513486-8513534)
chr5 (164-236)||(30349523-30349595)
chr5 (164-235)||(2485141-2485212)
chr5 (164-235)||(7866525-7866596)
chr5 (161-235)||(14974416-14974488)
chr5 (164-235)||(19572668-19572739)
chr5 (161-235)||(35813090-35813164)
chr5 (161-235)||(37263182-37263256)
chr5 (187-235)||(1898968-1899016)
chr5 (163-215)||(25510430-25510482)
chr5 (164-236)||(42861309-42861381)
chr5 (188-235)||(23247443-23247490)
chr5 (162-212)||(26077083-26077133)
chr5 (162-235)||(4016347-4016420)
chr5 (167-212)||(7308479-7308524)
chr5 (164-228)||(20255313-20255377)
chr5 (167-235)||(20692880-20692948)
chr5 (164-212)||(23383592-23383640)
chr5 (188-236)||(24498951-24498999)
chr5 (164-235)||(20525782-20525853)
chr5 (187-236)||(11845892-11845941)
chr5 (187-236)||(16755028-16755077)
chr5 (164-228)||(5079275-5079339)
chr5 (187-235)||(14152017-14152065)
chr5 (187-235)||(24875312-24875360)
chr5 (187-235)||(30995088-30995136)
[»] chr2 (44 HSPs)
chr2 (161-235)||(21180406-21180480)
chr2 (162-235)||(11069819-11069892)
chr2 (163-235)||(8410073-8410145)
chr2 (163-235)||(10026708-10026780)
chr2 (163-235)||(10046568-10046640)
chr2 (163-235)||(38005344-38005416)
chr2 (162-235)||(7747215-7747288)
chr2 (163-235)||(331443-331515)
chr2 (156-235)||(9360840-9360919)
chr2 (164-235)||(18902622-18902693)
chr2 (163-236)||(19976898-19976971)
chr2 (162-235)||(21286385-21286458)
chr2 (163-236)||(34356148-34356221)
chr2 (164-236)||(3643978-3644050)
chr2 (164-236)||(29422158-29422230)
chr2 (164-236)||(38962706-38962778)
chr2 (187-235)||(41220601-41220649)
chr2 (163-235)||(2550810-2550882)
chr2 (163-235)||(22593077-22593149)
chr2 (163-235)||(44945536-44945608)
chr2 (162-236)||(15079424-15079498)
chr2 (190-235)||(10823029-10823074)
chr2 (164-236)||(6358242-6358314)
chr2 (168-236)||(7787003-7787071)
chr2 (164-236)||(12864167-12864239)
chr2 (163-235)||(14169701-14169773)
chr2 (163-235)||(20612628-20612700)
chr2 (187-235)||(25540496-25540544)
chr2 (167-235)||(37560119-37560187)
chr2 (171-235)||(39806977-39807041)
chr2 (164-235)||(2528433-2528504)
chr2 (164-235)||(3811783-3811854)
chr2 (161-236)||(14853458-14853533)
chr2 (164-231)||(33005695-33005762)
chr2 (164-235)||(41031998-41032068)
chr2 (189-235)||(34346379-34346425)
chr2 (190-235)||(3849006-3849051)
chr2 (190-235)||(15234153-15234198)
chr2 (164-225)||(16813266-16813327)
chr2 (164-225)||(16852545-16852606)
chr2 (162-235)||(23500774-23500846)
chr2 (190-235)||(35946708-35946753)
chr2 (164-236)||(40969006-40969078)
chr2 (163-231)||(42770747-42770815)
[»] chr7 (34 HSPs)
chr7 (162-235)||(47341820-47341893)
chr7 (164-236)||(1605887-1605959)
chr7 (164-235)||(22268121-22268192)
chr7 (164-235)||(34127712-34127783)
chr7 (164-235)||(43925458-43925529)
chr7 (162-236)||(14650261-14650335)
chr7 (163-235)||(48804628-48804700)
chr7 (164-235)||(22973913-22973984)
chr7 (166-235)||(34659174-34659243)
chr7 (164-236)||(4228842-4228914)
chr7 (163-235)||(18785614-18785686)
chr7 (164-235)||(22993459-22993530)
chr7 (162-235)||(1797404-1797477)
chr7 (167-236)||(5069906-5069975)
chr7 (162-235)||(10047968-10048041)
chr7 (163-236)||(45447915-45447988)
chr7 (164-236)||(4195293-4195365)
chr7 (163-235)||(26423379-26423451)
chr7 (164-231)||(13095804-13095871)
chr7 (164-235)||(16802069-16802140)
chr7 (168-235)||(42032046-42032113)
chr7 (164-235)||(43862064-43862135)
chr7 (161-235)||(17748474-17748548)
chr7 (170-235)||(9685691-9685756)
chr7 (167-236)||(24969415-24969484)
chr7 (164-236)||(27028225-27028297)
chr7 (164-236)||(37514867-37514939)
chr7 (164-235)||(19914794-19914865)
chr7 (164-235)||(21530694-21530765)
chr7 (160-235)||(42210354-42210429)
chr7 (164-231)||(43346875-43346942)
chr7 (162-227)||(39420782-39420847)
chr7 (163-235)||(4973202-4973274)
chr7 (163-235)||(27875180-27875251)
[»] chr3 (42 HSPs)
chr3 (167-236)||(31072824-31072893)
chr3 (164-236)||(15320129-15320201)
chr3 (163-235)||(35315898-35315970)
chr3 (164-235)||(32873642-32873712)
chr3 (164-235)||(42412867-42412938)
chr3 (164-235)||(54261169-54261240)
chr3 (161-235)||(26207894-26207968)
chr3 (162-235)||(11687202-11687275)
chr3 (158-235)||(25294897-25294974)
chr3 (163-236)||(45877396-45877469)
chr3 (162-231)||(48341961-48342030)
chr3 (164-235)||(46529963-46530034)
chr3 (161-235)||(10040497-10040571)
chr3 (165-235)||(35923716-35923786)
chr3 (163-236)||(13893868-13893941)
chr3 (163-236)||(29127861-29127934)
chr3 (162-235)||(51683047-51683120)
chr3 (163-235)||(30735038-30735110)
chr3 (163-231)||(41630609-41630677)
chr3 (162-236)||(10855325-10855399)
chr3 (163-235)||(928542-928614)
chr3 (168-236)||(3136785-3136853)
chr3 (187-235)||(6462378-6462426)
chr3 (187-235)||(7328810-7328858)
chr3 (187-235)||(7613019-7613067)
chr3 (164-236)||(7650170-7650242)
chr3 (163-235)||(40944825-40944897)
chr3 (163-235)||(49198293-49198365)
chr3 (191-235)||(52364893-52364937)
chr3 (160-235)||(7310796-7310871)
chr3 (164-235)||(29135856-29135927)
chr3 (161-236)||(30767339-30767414)
chr3 (164-235)||(33251605-33251676)
chr3 (164-235)||(47471775-47471846)
chr3 (193-235)||(15795586-15795628)
chr3 (169-235)||(49082772-49082838)
chr3 (169-230)||(33560808-33560869)
chr3 (171-235)||(10043100-10043164)
chr3 (200-236)||(35998662-35998698)
chr3 (164-216)||(37092617-37092669)
chr3 (187-235)||(49543485-49543533)
chr3 (191-235)||(53649697-53649741)
[»] chr1 (43 HSPs)
chr1 (164-235)||(33418208-33418279)
chr1 (161-235)||(5855463-5855537)
chr1 (161-235)||(18915808-18915882)
chr1 (164-235)||(11397981-11398052)
chr1 (162-236)||(10336458-10336532)
chr1 (165-235)||(41663949-41664019)
chr1 (167-236)||(2567223-2567292)
chr1 (159-235)||(9659271-9659347)
chr1 (164-236)||(31152660-31152732)
chr1 (187-235)||(34334388-34334436)
chr1 (164-235)||(9853370-9853440)
chr1 (164-235)||(15238199-15238270)
chr1 (164-235)||(31576640-31576711)
chr1 (164-235)||(49078058-49078129)
chr1 (162-236)||(10422730-10422804)
chr1 (162-235)||(34719718-34719791)
chr1 (163-236)||(40288569-40288642)
chr1 (163-236)||(48798162-48798235)
chr1 (164-232)||(8763935-8764003)
chr1 (187-235)||(45361975-45362023)
chr1 (160-235)||(2981024-2981099)
chr1 (164-235)||(41743217-41743288)
chr1 (161-235)||(26258637-26258711)
chr1 (162-235)||(892390-892463)
chr1 (163-236)||(8905242-8905315)
chr1 (187-232)||(16956433-16956478)
chr1 (187-236)||(32142938-32142986)
chr1 (158-235)||(34877928-34878005)
chr1 (187-235)||(1764282-1764330)
chr1 (187-235)||(6563408-6563456)
chr1 (165-233)||(42744732-42744800)
chr1 (200-236)||(45536688-45536724)
chr1 (168-235)||(32819-32886)
chr1 (164-235)||(5503975-5504046)
chr1 (164-235)||(12036837-12036908)
chr1 (164-235)||(17642097-17642168)
chr1 (162-236)||(30927819-30927894)
chr1 (161-235)||(17358564-17358638)
chr1 (187-236)||(14254360-14254409)
chr1 (159-212)||(40226358-40226411)
chr1 (167-227)||(10173072-10173132)
chr1 (163-211)||(32151039-32151087)
chr1 (167-235)||(47312991-47313059)
[»] scaffold0002 (3 HSPs)
scaffold0002 (164-235)||(516-587)
scaffold0002 (187-236)||(319391-319440)
scaffold0002 (163-235)||(412118-412190)
[»] scaffold0005 (2 HSPs)
scaffold0005 (187-235)||(271166-271214)
scaffold0005 (164-222)||(250118-250176)
[»] scaffold0006 (1 HSPs)
scaffold0006 (164-235)||(68463-68534)
[»] scaffold0332 (1 HSPs)
scaffold0332 (162-236)||(15275-15349)
[»] scaffold0029 (1 HSPs)
scaffold0029 (164-235)||(40990-41061)
[»] scaffold0376 (1 HSPs)
scaffold0376 (187-235)||(12639-12687)
[»] scaffold0341 (1 HSPs)
scaffold0341 (187-235)||(18601-18649)
[»] scaffold0209 (1 HSPs)
scaffold0209 (163-235)||(12520-12592)
[»] scaffold0016 (1 HSPs)
scaffold0016 (164-212)||(8825-8873)
[»] scaffold0010 (1 HSPs)
scaffold0010 (161-235)||(25876-25950)
[»] scaffold0004 (1 HSPs)
scaffold0004 (170-236)||(95070-95136)


Alignment Details
Target: scaffold0384 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 5756 - 5991
Alignment:
Q  1 caaaaagaatggtatctacacaaagttctaaagtcaacatgtaaatcataagagatggatcgtgaatgaagggcaaataaagaacatattaatacaatat 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  5756 caaaaagaattgtatctacacaaagttctaaagtcaacatgtaaatcataagagatgcatcgtgaatgaagtgcaaataaagaacatattaatacaatat 5855  T
Q  101 tacagcattcattgagataacgtattctcaaaatttcctaatctttaaaaagacaataacattaaccaagttgtttgggttccaaaggcaaggagctcat 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||| |  |||||||||||| |    
T  5856 tacagcattcattgagataacgtattctcaaagtttcctaatctttaaaaagagaataacattaaccaagttgcttgggttctagtggcaaggagctcct 5955  T
Q  201 tccaaggacgtacccggagaataccgggttcgattt 236  Q
    | ||||| ||||||||| |||||| |||||||||||    
T  5956 ttcaagggcgtacccggggaatactgggttcgattt 5991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 7968 - 8192
Alignment:
Q  1 caaaaagaatggtatctacacaaagttctaaagtcaacatgtaaatcataagagatggatcgtgaatgaagggcaaataaagaacatattaatacaatat 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  7968 caaaaagaattgtatctacacaaagttctaaagtcaacatgtaaatcataagagatggatcgtgaatgaagtgcaaataaagaacatattaatgcaatat 8067  T
Q  101 tacagcattcattgagataacgtattctcaaaatttcctaatctttaaaaagacaataacattaaccaagttgtttgggttccaaaggcaaggagctcat 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||          ||||| |    
T  8068 tacagcattcattgagataacgtattctcaaagtttcctaatctttaaaaagacaataacattaaccaagttatttgggctcc----------agctcct 8157  T
Q  201 tccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| |||||||||||||||||    
T  8158 tccaaggacgtacccggggaataccgggttcgatt 8192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 34846759 - 34846831
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34846759 ttaaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacccgg-gaataccgggttcgatt 34846831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 14666237 - 14666163
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||| ||||| ||||  |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  14666237 attaaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgatt 14666163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 44893442 - 44893369
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||||||| ||||  |||||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  44893442 taaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaattt 44893369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 38922577 - 38922506
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  38922577 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 38922506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 14846516 - 14846594
Alignment:
Q  157 taacattaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||| |||||||||||||||||| ||||  |||||| ||||| ||| |||||||||||||| |||||||||||||||||    
T  14846516 taactttaaccaagttgtttgggctccactggcaagaagctccttctaaggacgtacccggggaataccgggttcgatt 14846594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 2467286 - 2467209
Alignment:
Q  159 acattaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||| |||||||||| ||||| ||||  |||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  2467286 acataaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattt 2467209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 24938726 - 24938653
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||||||| ||||  ||||||||||||  ||||||||| ||||||||||||||| ||||||||||    
T  24938726 taaccaagttgtttgggctccagtggcaaggagctccctccaaggacatacccggagaataccaggttcgattt 24938653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 8141046 - 8141121
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||||||||| ||||  |||||||||||  |||||||||||||  ||| ||||||||||||||||||    
T  8141046 attaaccaagttgtttgggctccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgattt 8141121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 45521116 - 45521187
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  ||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  45521116 aaccaagttgcttgggctccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcgatt 45521187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 1013143 - 1013069
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||| ||||| ||||  |||||||||||  ||||||||||||| |||| |||||||||||||||||    
T  1013143 attaaccaagttgcttgggctccagtggcaaggagctttttccaaggacgtatccggggaataccgggttcgatt 1013069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 22810025 - 22810098
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||||| || |  |||||||||||| ||||||||||||| |||||||| | |||||||||||    
T  22810025 ttaaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtatccggagaacatcgggttcgatt 22810098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 33401963 - 33401890
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||| |||||||||||| ||||  |||||||||||| || ||||||||||| ||| ||||||||||||||||||    
T  33401963 taactaagttgtttgggctccagtggcaaggagctcctttcaaggacgtactcggggaataccgggttcgattt 33401890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 6100418 - 6100490
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| | ||  |||||||||||| || |||||||||| |||| |||||||||||||||||    
T  6100418 taaccaagttgtttgggcttcagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgatt 6100490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 6940505 - 6940577
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||| ||||  || ||||||||||||||||||| ||| ||||| |||| ||||||||||||    
T  6940505 aaccaagttgtttgggctccagtggtaaggagctcattccaaggaggtatccggaaaatatcgggttcgattt 6940577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 13085470 - 13085542
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||| ||||||||| ||||  ||| |||||||| ||||||||||||| |||| |||||||||||||||||    
T  13085470 taaccaacttgtttgggctccagtggcgaggagctccttccaaggacgtatccggggaataccgggttcgatt 13085542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 11785887 - 11785934
Alignment:
Q  188 gcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  11785887 gcaaggagctcattccaaggacgtacccggggaataccggattcgatt 11785934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 15884718 - 15884647
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  || ||||||||| ||||||||||||||| || |||||||||||||||||    
T  15884718 aaccaagttgattgggctccagtggtaaggagctccttccaaggacgtacctggggaataccgggttcgatt 15884647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 24837189 - 24837260
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||| |||||||||| |||||||| ||||||||    
T  24837189 aaccaagttgcttgggctccagtggcaaggagctccttccaagtacgtacccggggaataccgtgttcgatt 24837260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 10927551 - 10927624
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||| | ||  |||||||||||  || ||||||||||||||| |||||||||||||||||    
T  10927551 ttaaccaagttgcttgggcttcagtggcaaggagcttctttcaaggacgtacccggggaataccgggttcgatt 10927624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 9860159 - 9860087
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgta-cccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  ||||| |||||| ||||||||||||| || || |||||||||||||||||    
T  9860159 aaccaagttgtttgggatccagtggcaaagagctccttccaaggacgtatccgggggaataccgggttcgatt 9860087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 17981392 - 17981459
Alignment:
Q  168 aagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||| ||||| ||||  |||||||||||| ||||||||| ||||||||  ||||||||||||||||    
T  17981392 aagttgcttgggctccagtggcaaggagctccttccaaggatgtacccgggaaataccgggttcgatt 17981459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 18091347 - 18091400
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccg 216  Q
    ||||||||||||||||| ||||  ||||||||||| |||||||||||| |||||    
T  18091347 taaccaagttgtttgggctccagtggcaaggagcttattccaaggacgcacccg 18091400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 583760 - 583832
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| || |  |||||||||||  |||||||||||||| ||   ||||||||||||||||    
T  583760 taaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgatt 583832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 3418676 - 3418604
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||  |||   |||||||||||| ||||||||||||| | || ||||| ||||||||||||    
T  3418676 aaccaagttgtttggactcccgtggcaaggagctccttccaaggacgtatctggggaatatcgggttcgattt 3418604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 18373961 - 18374028
Alignment:
Q  168 aagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||| ||||||||||||||||||| ||  || ||||  |||||| |||||||||    
T  18373961 aagttgtttgggctccaatggcaaggagctcattccaaagatatatccgggaaataccaggttcgatt 18374028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 4479455 - 4479387
Alignment:
Q  167 caagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||| ||  |||||| || || || |||||||||||| | |||||||||| |||||||    
T  4479455 caagttgtttgggtttcagtggcaagaagttcctttcaaggacgtacctgtagaataccggattcgatt 4479387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 10535566 - 10535518
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgta 212  Q
    |||||||||||||||  ||||  |||||||||||| |||||||||||||    
T  10535566 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgta 10535518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 17845680 - 17845740
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaatac 224  Q
    |||||||||||||||| ||||  ||||| |||||| ||||||||| |||| ||| ||||||    
T  17845680 aaccaagttgtttgggctccagtggcaatgagctccttccaaggatgtactcggggaatac 17845740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 29933719 - 29933790
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||  ||||  |||||||||||| ||| ||| | ||| |||||||||| |||||||||||    
T  29933719 taaccaagttgtttggactccagtggcaaggagctccttctaagaatgtatccggagaata-cgggttcgatt 29933790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 43027251 - 43027323
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| ||||  ||||| ||||||||| |||| |||||   || |||||| ||||||||||    
T  43027251 taaccaagttgtttgggctccagtggcaatgagctcatttcaagaacgtatttggggaatactgggttcgatt 43027323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 53599007 - 53599079
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| ||||  |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  53599007 taaccaagttgtttgggctccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 53599079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 41339560 - 41339489
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcga 233  Q
    |||||||||||||||||| || |  |||||||||||| ||||||||||||||||||||||||||||||||||    
T  41339560 ttaaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccggagaataccgggttcga 41339489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 47078406 - 47078477
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||||||||  |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  47078406 aaccaagttgcttgggttccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 47078477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 6779159 - 6779230
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  |||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  6779159 aaccaagttgtttgggctccagtggcaaggagcttcttccaaggacgtacctggagaataccgggttcgatt 6779230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 29895732 - 29895806
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||| ||||| ||||  |||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  29895732 attaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatt 29895806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 34667765 - 34667695
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgat 234  Q
    |||||||||||||||| || |  |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  34667765 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgat 34667695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 1446773 - 1446845
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||||| ||||  |||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  1446773 taaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatt 1446845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 36145355 - 36145307
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36145355 ggcaaggagctcattccaaggacgtacccggggaataccgggttcgatt 36145307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 38075380 - 38075452
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| ||||  ||||||||| || |||||||||||||  |||||||||||||||||||||    
T  38075380 taaccaagttgtttgggctccagcggcaaggagttccttccaaggacgtattcggagaataccgggttcgatt 38075452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 55920982 - 55921053
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  55920982 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgatt 55921053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 6032800 - 6032731
Alignment:
Q  167 caagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||| ||||| ||||  |||||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  6032800 caagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaattt 6032731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 52950028 - 52950101
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||||| || |  |||||||||||| ||||||||||||||| || ||||| |||||||||||    
T  52950028 ttaaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacctggggaatatcgggttcgatt 52950101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 2559255 - 2559327
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||| ||||  ||||| |||||| ||||||||||||||| || ||||||||| ||||||||    
T  2559255 aaccaagttgtttgggctccagtggcaacgagctccttccaaggacgtacctggggaataccggattcgattt 2559327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 8888969 - 8889041
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| || |  |||||||||||| ||| ||||||||| |||| |||||||||||||||||    
T  8888969 taaccaagttgtttgggctctagcggcaaggagctccttctaaggacgtatccggggaataccgggttcgatt 8889041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 24166397 - 24166469
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||||| ||||  |||||||||||| |||||||||||||| ||| |||||| ||||||||||    
T  24166397 taaccaagttgattgggctccagtggcaaggagctccttccaaggacgtactcggggaatactgggttcgatt 24166469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 36262905 - 36262857
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  36262905 ggcaagaagctccttccaaggacgtacccggagaataccgggttcgatt 36262857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 1940937 - 1940866
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| || |  |||||||||||| ||||||||||||||||||  |||| |||||||||||    
T  1940937 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgatt 1940866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 13073486 - 13073557
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| || |  ||||| |||||| ||||||||||||||| ||||||||||| ||||||||    
T  13073486 aaccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacctggagaataccgagttcgatt 13073557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 27531820 - 27531749
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||  ||||  |||||||||||| |||||||||||||||| | |||||||||||||||||    
T  27531820 aaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccagggaataccgggttcgatt 27531749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 38165975 - 38166046
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  |||||||||||| ||||||||||||| |||| |||||| ||||| ||||    
T  38165975 aaccaagttgtttgggctccactggcaaggagctccttccaaggacgtatccggggaatactgggttggatt 38166046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 14567199 - 14567257
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaat 222  Q
    |||||||||| ||||| ||||  ||||||||||||||||||||||||||||||| ||||    
T  14567199 aaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaat 14567257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 19651610 - 19651536
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||||| ||||  ||||| |||||| ||||||||||||| ||| |||||||||  ||||||||    
T  19651610 ttaaccaagttgtttgggctccagtggcaatgagctccttccaaggacgtatccgaagaataccgaattcgattt 19651536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 27248375 - 27248445
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcga 233  Q
    ||||||||||| ||||| ||||  ||||| |||||| ||||||||||||| |||| |||||||||||||||    
T  27248375 taaccaagttgcttgggctccagtggcaacgagctccttccaaggacgtatccggggaataccgggttcga 27248445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 7000470 - 7000543
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||||| | ||  |||||| ||||| |||||||||||||| ||| |||||||| ||||||||    
T  7000470 ttaaccaagttgtttgggctacagtggcaagaagctccttccaaggacgtactcggggaataccgagttcgatt 7000543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 26480114 - 26480041
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||||| ||||  |||||||||||| ||||||| ||||||  || |||||||| ||||||||    
T  26480114 ttaaccaagttgtttgggctccactggcaaggagctccttccaagtacgtacatggggaataccgagttcgatt 26480041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 29588687 - 29588755
Alignment:
Q  167 caagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||| ||||| ||||  ||||||||||||||||||| ||||| |||||  ||||||||||||||||    
T  29588687 caagttgattgggctccagtggcaaggagctcattccaaagacgtgcccgggaaataccgggttcgatt 29588755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 38168228 - 38168276
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| |||||||||||||||||| ||||||| |||||||||    
T  38168228 ggcaaggagctccttccaaggacgtacccggggaataccaggttcgatt 38168276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 5473007 - 5472940
Alignment:
Q  168 aagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||  ||||||||||||||| |||||||||| |||| ||||||| |||| ||||    
T  5473007 aagttgtttgggctccagtggcaaggagctcatttcaaggacgtatccggggaataccaggtttgatt 5472940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 15732611 - 15732540
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  |||||| |  |  ||||||||||||| ||||||||||||||||||||||    
T  15732611 aaccaagttgtttgggctccagtggcaagaaaattcttccaaggacgtatccggagaataccgggttcgatt 15732540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 41163047 - 41162973
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||| ||||| ||||  | |||||||||| ||||||||||||| ||||  ||||||| |||||||||    
T  41163047 ttaaccaagttgcttgggctccagtgacaaggagctccttccaaggacgtatccgggaaataccgagttcgattt 41162973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 13552068 - 13552133
Alignment:
Q  170 gttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||  |||||||||||| ||||||| ||||| |||| ||||| |||||||||||    
T  13552068 gttgtttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgatt 13552133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 20532549 - 20532500
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||| ||||||||||||| | |||||||||||||||| |||||||||    
T  20532549 ggcaaggtgctcattccaaggccatacccggagaataccgagttcgattt 20532500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 15840074 - 15840026
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||||||||||||  || |||||||||||||||||    
T  15840074 ggcaaggagctccttccaaggacgtacttggggaataccgggttcgatt 15840026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 33647669 - 33647741
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||| ||||| || |  |||||||||||| || |||||||||| | || ||||||||||||||||||    
T  33647669 aaccaagttgcttgggctctagtggcaaggagctcctttcaaggacgtatctggggaataccgggttcgattt 33647741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 3574609 - 3574542
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttc 231  Q
    |||||||||| ||||| ||||  |||||||||||| |||||||||||||||  | |||||||| ||||    
T  3574609 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctagggaataccgagttc 3574542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 14123964 - 14124035
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||| |||||| ||||| ||||||| ||||||  |  ||||||| |||||||||    
T  14123964 aaccaagttgtttgggctccaatggcaagaagctccttccaagaacgtacttgaggaataccaggttcgatt 14124035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 3159596 - 3159563
Alignment:
Q  200 ttccaaggacgtacccggagaataccgggttcga 233  Q
    ||||||||||||| ||||||||||||||||||||    
T  3159596 ttccaaggacgtatccggagaataccgggttcga 3159563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 14858662 - 14858727
Alignment:
Q  167 caagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcg 232  Q
    ||||||||||| | ||||  | ||| || ||| ||||||||| |||||||||||||||||||||||    
T  14858662 caagttgtttgagctccattgacaatgaactccttccaaggatgtacccggagaataccgggttcg 14858727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 43458560 - 43458609
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgta 212  Q
    ||||||||||| ||||| ||||  |||||| |||||||||||||||||||    
T  43458560 taaccaagttgcttgggctccagtggcaagaagctcattccaaggacgta 43458609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 15829646 - 15829706
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaata 223  Q
    ||||||||||||||||| ||||  | |||||||||  || |||||||||| ||||||||||    
T  15829646 taaccaagttgtttgggctccagtgacaaggagcttctttcaaggacgtatccggagaata 15829706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 20128280 - 20128328
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||| || ||||||||||||| |||| |||||| ||||||||||    
T  20128280 ggcaaggagttccttccaaggacgtatccggggaatactgggttcgatt 20128328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 42722713 - 42722673
Alignment:
Q  191 aggagctcattccaaggacgtacccggagaataccgggttc 231  Q
    |||||||| ||||||||||||||||||  ||||||||||||    
T  42722713 aggagctccttccaaggacgtacccgggaaataccgggttc 42722673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 5253386 - 5253315
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||| |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  5253386 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 5253315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 9179899 - 9179828
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||||||||| | |||||||||||||||||    
T  9179899 aaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacccagggaataccgggttcgatt 9179828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 8612137 - 8612066
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||  ||||  |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  8612137 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 8612066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 21016916 - 21016843
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||| ||||  |||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  21016916 ttaaccaagttgcttgggctccagtggcaaggagctccttccagggacgtacccggggaataccgggttcgatt 21016843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 21898594 - 21898666
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||||| ||||  |||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  21898594 taaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatt 21898666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 19230725 - 19230649
Alignment:
Q  159 acattaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||| |||||||||||||||| ||||  |||||||||||| |||||||||||||| ||| ||||||||| ||||||||    
T  19230725 acatcaaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtactcgg-gaataccggattcgattt 19230649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 29333302 - 29333229
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||||||| || |  ||||| |||||| |||||||||||||||| | ||||||||||||||||||    
T  29333302 taaccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacccagggaataccgggttcgattt 29333229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 9147251 - 9147319
Alignment:
Q  167 caagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||| ||||  || ||||||||||||||||||||||||| || ||||| |||||||||||    
T  9147251 caagttgtttgggctccagtgggaaggagctcattccaaggacgtacctggggaatatcgggttcgatt 9147319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 2271464 - 2271393
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  |||||||||||| |||||||||||||  ||| |||||||||||||||||    
T  2271464 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgatt 2271393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 14107521 - 14107450
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  |||||||||||| |||||| ||||||  ||| |||||||||||||||||    
T  14107521 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgatt 14107450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 3030782 - 3030733
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgta 212  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  3030782 taaccaagttgtttgggctccagtggcaaggagctcattccaaggacgta 3030733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 6606237 - 6606189
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  6606237 ggcaaggagctccttccaaggacgtatccggggaataccgggttcgatt 6606189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 3588104 - 3588037
Alignment:
Q  168 aagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| || |  ||||||||| | ||||||| |||||| ||||||||||||||||||||||    
T  3588104 aagttgtttgggctcaagtggcaaggagtttattccaaagacgtatccggagaataccgggttcgatt 3588037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 15643991 - 15643921
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  |||||||||||||||||||||||||| | || ||||| |||||||||||    
T  15643991 aaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatctgg-gaataacgggttcgatt 15643921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 24672029 - 24671962
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttc 231  Q
    |||||||||| ||||| ||||  |||||||||||| || |||||||||| | ||||||||||||||||    
T  24672029 aaccaagttgcttgggctccagtggcaaggagctcctttcaaggacgtatctggagaataccgggttc 24671962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 29444930 - 29444856
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||  ||||| || |  |||||||||||| |||||| ||||||||||| | ||||||||||||||||    
T  29444930 ttaaccaagttacttgggctctagtggcaaggagctccttccaaagacgtacccgggggataccgggttcgattt 29444856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 13036164 - 13036095
Alignment:
Q  167 caagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||| ||||| ||||  |||||||||||| |||||||||||||  ||| ||||| ||||||||||||    
T  13036164 caagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaatatcgggttcgattt 13036095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 34954759 - 34954711
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||||||||||||| || ||||||| |||||||||    
T  34954759 ggcaaggagctccttccaaggacgtacctggggaataccaggttcgatt 34954711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 5759575 - 5759646
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  |||||||| ||| |||||||||||||||||  ||||| |||||| ||||    
T  5759575 aaccaagttgcttgggctccagtggcaaggaactccttccaaggacgtacccgaggaatatcgggtttgatt 5759646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 10311608 - 10311562
Alignment:
Q  188 gcaaggagctcattccaaggacgtacccggagaataccgggttcgat 234  Q
    ||||||||||| ||||||| ||||| |||| ||||||||||||||||    
T  10311608 gcaaggagctccttccaagaacgtatccggggaataccgggttcgat 10311562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 13468878 - 13468947
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttc 231  Q
    |||||||||||| ||||| ||    |||||||||||| ||||||||||||| |||| ||||||| |||||    
T  13468878 ttaaccaagttgcttgggctctggtggcaaggagctccttccaaggacgtatccggggaataccaggttc 13468947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 26476499 - 26476454
Alignment:
Q  191 aggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||| ||||||||||||||| |||||||| ||||| ||||||    
T  26476499 aggagctccttccaaggacgtacctggagaatatcgggtacgattt 26476454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 6600786 - 6600726
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaatac 224  Q
    |||||||||||||||  | ||  ||||| ||||||||| ||| ||||||||||||||||||    
T  6600786 aaccaagttgtttggacttcagtggcaaagagctcatttcaatgacgtacccggagaatac 6600726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 8932607 - 8932679
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||   ||||  ||||||||| || ||||||||| ||| |||| ||||| |||||||||||    
T  8932607 taaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgatt 8932679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 8938657 - 8938729
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| ||||  | |||||||||| |||||| ||| || |||| ||||||  |||||||||    
T  8938657 taaccaagttgtttgggctccagtgacaaggagctccttccaaagacatatccggggaatacttggttcgatt 8938729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 8944073 - 8944145
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||   ||||  ||||||||| || ||||||||| ||| |||| ||||| |||||||||||    
T  8944073 taaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgatt 8944145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 6767217 - 6767143
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||| ||||| ||||  |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  6767217 attaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 6767143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 18136445 - 18136372
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||||| ||||  |||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  18136445 ttaaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgatt 18136372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 3654075 - 3654004
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  | ||| |||||| ||||||||||||||||||||||||||||||||||||    
T  3654075 aaccaagttgtttgggctccagtgacaatgagctctttccaaggacgtacccggagaataccgggttcgatt 3654004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 5732083 - 5732012
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  5732083 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 5732012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 9812816 - 9812887
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||  ||||  |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  9812816 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 9812887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 12704958 - 12705029
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||  ||||  |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  12704958 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 12705029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 41163622 - 41163551
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  |||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  41163622 aaccaagttgtttgggctccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcgatt 41163551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 28856920 - 28856992
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||||| ||||  |||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  28856920 taaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgatt 28856992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 12766075 - 12766146
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||  || |  |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  12766075 aaccaagttgtttggactcgagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 12766146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 28857072 - 28857143
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  28857072 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgatt 28857143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 39728331 - 39728402
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  |||||||||||| ||||||| |||||||||| ||||||| |||||||||    
T  39728331 aaccaagttgtttgggctccagtggcaaggagctctttccaagaacgtacccggggaataccaggttcgatt 39728402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 25417348 - 25417275
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| |||||| ||||  |||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  25417348 attaaccaagtt-tttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgatt 25417275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 35403677 - 35403604
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||| ||||||||| ||||  |||||||||||| |||||||||||||| |||  ||||||||||||||||    
T  35403677 ttaaccaacttgtttgggctccagtggcaaggagctccttccaaggacgtactcgggaaataccgggttcgatt 35403604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 42086269 - 42086342
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||| |||   |||||||||||| |||||||||||||||||  |||||||||||||||||    
T  42086269 ttaaccaagttgcttgggctccggtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgatt 42086342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 1538374 - 1538446
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| ||||  |||||||||||| |||| ||||||||  ||| |||||||||||||||||    
T  1538374 taaccaagttgtttgggctccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgatt 1538446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 8513486 - 8513534
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  8513486 ggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 8513534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 30349523 - 30349595
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||| ||||  ||||||||| || ||||||||||||| |||| |||||||||||| |||||    
T  30349523 aaccaagttgtttgggctccagtggcaaggagttccttccaaggacgtatccggggaataccgggtttgattt 30349595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 2485141 - 2485212
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||  ||||| ||||||||||||||||||||||||||  | | |||||| ||||||||||    
T  2485141 aaccaagttgtttggactccaatggcaaggagctcattccaaggacgtattcagggaatactgggttcgatt 2485212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 7866525 - 7866596
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||  ||||  |||||||||||| |||||||||||||||||  |||||||||||||||||    
T  7866525 aaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgatt 7866596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 14974488 - 14974416
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||| ||||| |||   |||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  14974488 attaaccaagttgcttgggctcct--ggcaaggagctcattctaaggacgtatccggagaatatcgggttcgatt 14974416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 19572668 - 19572739
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||||||||| |||| |||||||||||| ||||    
T  19572668 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagatt 19572739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 35813164 - 35813090
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||| ||||||||||||| | |   |||||| |||||||||||||||||||||||  |||||||||||||||||    
T  35813164 attaatcaagttgtttgggctgcggtggcaagaagctcattccaaggacgtacccgaggaataccgggttcgatt 35813090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 37263182 - 37263256
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||| ||||| ||||  ||||||||| || ||| |||||||||||||| ||||| |||||||||||    
T  37263182 attaaccaagttgcttgggctccagtggcaaggagttccttctaaggacgtacccggggaatatcgggttcgatt 37263256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 1898968 - 1899016
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||||||| |||||||| |||||||||||||||||    
T  1898968 ggcaaggagctccttccaaggatgtacccggggaataccgggttcgatt 1899016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 25510430 - 25510482
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtaccc 215  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||| ||||||||    
T  25510430 taaccaagttgtttgggttccaatggcaaggaactccttccaagaacgtaccc 25510482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 42861381 - 42861309
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||| ||||||||| ||||  ||||||||||||||||||||||| || |||| ||||| ||||||| ||||    
T  42861381 aaccaaattgtttgggctccagtggcaaggagctcattccaaggacatatccggggaatatcgggttcaattt 42861309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 23247490 - 23247443
Alignment:
Q  188 gcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||||||||||||| || ||||| |||||||||||    
T  23247490 gcaaggagctcattccaaggacgtacctggggaatatcgggttcgatt 23247443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 26077083 - 26077133
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgta 212  Q
    |||||||||||||||||| ||||  || |||||||||||||||||||||||    
T  26077083 ttaaccaagttgtttgggctccagtggtaaggagctcattccaaggacgta 26077133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 4016420 - 4016347
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||| |||| ||||  |||||| ||||||||||||||||||||| |   |||| |||||||||||    
T  4016420 ttaaccaagttgtatgggctccagtggcaagaagctcattccaaggacgtacctgagaaatatcgggttcgatt 4016347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 7308524 - 7308479
Alignment:
Q  167 caagttgtttgggttccaaaggcaaggagctcattccaaggacgta 212  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||    
T  7308524 caagttgtttgggttctagtggcaaggagctcattccaaggacgta 7308479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 20255313 - 20255377
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccggg 228  Q
    |||||||||||||||| ||    |||||||||||||||| |||||||||| ||| ||||||||||    
T  20255313 aaccaagttgtttgggctctggtggcaaggagctcattctaaggacgtactcggggaataccggg 20255377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 20692880 - 20692948
Alignment:
Q  167 caagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||| || |  ||||| |||||  |||||||||||||||||| |||||||||||| ||||    
T  20692880 caagttgtttgggctctagtggcaaagagcttcttccaaggacgtacccggggaataccgggtttgatt 20692948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 23383592 - 23383640
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgta 212  Q
    |||||||||||||||| ||||  |||||||||||| |||||||||||||    
T  23383592 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgta 23383640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 24498951 - 24498999
Alignment:
Q  188 gcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||| ||||||||||||| | |||||||| ||||||||||||    
T  24498951 gcaaggagctccttccaaggacgtatctggagaatatcgggttcgattt 24498999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 20525782 - 20525853
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  |||||||||||| || |||||| ||| |||| ||||| |||||||||||    
T  20525782 aaccaagttgcttgggctccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggttcgatt 20525853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 11845941 - 11845892
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||| |||||||||||||||||   |||| ||||||||||||    
T  11845941 ggcaaggagctccttccaaggacgtacccgagaaatatcgggttcgattt 11845892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 16755028 - 16755077
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||| |||||| |||||| |||| |||||| |||||||||||    
T  16755028 ggcaaggagctctttccaaagacgtatccggggaatactgggttcgattt 16755077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 5079275 - 5079339
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccggg 228  Q
    ||||||||||||||||||||   ||||| |||||| ||||||| ||||| |||  ||||||||||    
T  5079275 aaccaagttgtttgggttccggtggcaaagagctccttccaagcacgtatccgtggaataccggg 5079339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 14152017 - 14152065
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| |||||| || ||||| || |||||||||||||||||    
T  14152017 ggcaaggagctccttccaatgatgtacctggggaataccgggttcgatt 14152065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 24875312 - 24875360
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| |||||||||||||||||  |||||| | |||||||||    
T  24875312 ggcaaggagcttattccaaggacgtacccaaagaatatcaggttcgatt 24875360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 30995088 - 30995136
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||||||||||||  || ||||||| |||||||||    
T  30995088 ggcaaggagctccttccaaggacgtacatggggaataccaggttcgatt 30995136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 21180480 - 21180406
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||||||||||||||| |||||||||| |||||||    
T  21180480 attaaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccgaagaataccggattcgatt 21180406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 11069819 - 11069892
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||| || ||||| ||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  11069819 ttaaccaagttgttttggctccaatggctaggagctcattccaaggacgtacccggggaataccaggttcgatt 11069892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 8410073 - 8410145
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||||| ||||  |||||||||||| |||||||||||||||||||||||| |||||||||||    
T  8410073 taaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgatt 8410145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 10026780 - 10026708
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||||| ||||| |||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  10026780 taaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtactcggaaaataccgggttcgatt 10026708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 10046640 - 10046568
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||||| ||||| |||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  10046640 taaccaagttgcttgggctccaatggcaaggagctccttccaagaacgtatccggagaataccgggttcgatt 10046568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 38005344 - 38005416
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| ||||  |||||||||||| |||||||||||||||||| |||||| ||||||||||    
T  38005344 taaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgatt 38005416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 7747215 - 7747288
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||| ||||  |||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  7747215 ttaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatt 7747288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 331443 - 331515
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||||| ||||  ||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  331443 taaccaagttgcttgggctccagtggcaatgagctctttccaaggacgtacccggggaataccgggttcgatt 331515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 9360919 - 9360840
Alignment:
Q  156 ataacattaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||| ||| ||||| | ||  |||||||| |||||||||||||||||||||| ||||||| |||||||||    
T  9360919 ataacattaaccaaattgcttgggcttcaggggcaaggatctcattccaaggacgtacccggggaataccaggttcgatt 9360840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 18902693 - 18902622
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  |||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  18902693 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgatt 18902622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 19976971 - 19976898
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||| ||||||||| ||||  |||||| ||||| ||||||||||||| |||| ||||||||||||||||||    
T  19976971 taaccaaattgtttgggctccagtggcaagtagctctttccaaggacgtatccggggaataccgggttcgattt 19976898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 21286385 - 21286458
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||| ||||||||||| | ||||  |||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  21286385 ttaatcaagttgtttgagctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatt 21286458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 34356148 - 34356221
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||||||| ||||  |||||||||||  ||||||||||||| | || ||||||||||||||||||    
T  34356148 taaccaagttgtttgggctccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgattt 34356221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 3644050 - 3643978
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||| ||||| ||||  || ||||||||||||||||||||||| |||| |||||||||||| |||||    
T  3644050 aaccaagttgcttgggctccagtggaaaggagctcattccaaggacgtatccggggaataccgggtttgattt 3643978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 29422158 - 29422230
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||| ||||   ||||||||||| || ||||||||||||||| |||||| |||||||||||    
T  29422158 aaccaagttgtttgggctccagtagcaaggagctcctttcaaggacgtacccggggaatactgggttcgattt 29422230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 38962706 - 38962778
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||  ||||  || |||||||||||| |||||||||| |||| ||||||||||||||||||    
T  38962706 aaccaagttgtttggactccagtggtaaggagctcatttcaaggacgtatccggggaataccgggttcgattt 38962778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 41220601 - 41220649
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  41220601 ggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 41220649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 2550810 - 2550882
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||||| ||||  |||||||||||| || |||||||||| |||| ||||| |||||||||||    
T  2550810 taaccaagttgcttgggctccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgatt 2550882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 22593077 - 22593149
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||| | ||||  |||||||||||| |||||||||||||||||| |||||| | ||||||||    
T  22593077 taaccaagttgcttgtgctccagtggcaaggagctccttccaaggacgtacccggggaatactgagttcgatt 22593149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 44945536 - 44945608
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||||| || |  |||||||||||| |||||||||||||| |||||||||| ||||| ||||    
T  44945536 taaccaagttgcttgggctcaagtggcaaggagctccttccaaggacgtactcggagaatactgggtttgatt 44945608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 15079424 - 15079498
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||| ||||| |||   |||||||| | | |||||||||||||||||| |||||| |||||||||||    
T  15079424 ttaaccaagttgcttgggctccggtggcaaggaacaccttccaaggacgtacccggggaatacagggttcgattt 15079498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 10823029 - 10823074
Alignment:
Q  190 aaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||| |||||||||||||||||| |||||||||||| ||||    
T  10823029 aaggagctccttccaaggacgtacccggggaataccgggtttgatt 10823074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 6358314 - 6358242
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||| ||||||||||| ||||  |||||| ||||||||| ||||||||| |||| ||||||| | ||||||||    
T  6358314 aaccgagttgtttgggctccagtggcaagaagctcattcaaaggacgtatccggggaataccagattcgattt 6358242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 7787003 - 7787071
Alignment:
Q  168 aagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||| ||||| ||||  |||||||| ||| || | ||||||||||||| ||||||||||||||||||    
T  7787003 aagttggttgggctccagtggcaaggaactcctttctaggacgtacccggggaataccgggttcgattt 7787071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 12864167 - 12864239
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||| ||||  | |||||||||| |||||| ||||||  ||| ||||||||| ||||||||    
T  12864167 aaccaagttgtttgggctccagtgacaaggagctccttccaatgacgtattcggggaataccggattcgattt 12864239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 14169773 - 14169701
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| ||||  | ||||||| || |||||||||||||  ||| ||||| |||||||||||    
T  14169773 taaccaagttgtttgggctccagtgacaaggagatctttccaaggacgtattcggggaatatcgggttcgatt 14169701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 20612700 - 20612628
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||||| ||||  |||||||||||| ||||||||  |||  ||| |||||||||||||||||    
T  20612700 taaccaagttgcttgggctccagtggcaaggagctccttccaaggttgtattcggggaataccgggttcgatt 20612628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 25540544 - 25540496
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||||||||||||| | || |||||| ||||||||||    
T  25540544 ggcaaggagctcattccaaggacgtatctggggaatactgggttcgatt 25540496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 37560119 - 37560187
Alignment:
Q  167 caagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||| ||||  || ||| ||||| |||||||||||||||||  ||||||| |||||||||    
T  37560119 caagttgtttgggctccagtggtaagaagctccttccaaggacgtacccgaggaataccaggttcgatt 37560187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 39807041 - 39806977
Alignment:
Q  171 ttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||| ||||  ||||||  |||| || ||||||||||||||| |||||||||||||||||    
T  39807041 ttgtttgggctccagtggcaagatgctccttacaaggacgtacccggggaataccgggttcgatt 39806977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 2528504 - 2528433
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||| ||||||||| ||||  ||||| |||||| |||||||||||||| ||  ||| |||||||||||||    
T  2528504 aaccaaattgtttgggctccagtggcaatgagctccttccaaggacgtactcgaggaacaccgggttcgatt 2528433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 3811854 - 3811783
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||  | ||| |||||||| ||| |||||||||||||| ||  ||||| |||||||||||    
T  3811854 aaccaagttgtttggtcttcaatggcaaggaactccttccaaggacgtactcgaggaatatcgggttcgatt 3811783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 14853533 - 14853458
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||||||||| ||||  |||||||| ||| || |||||| ||| |||| ||||||| | ||||||||    
T  14853533 attaaccaagttgtttgggctccagtggcaaggaactcctttcaaggatgtatccggggaataccagattcgattt 14853458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 33005695 - 33005762
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttc 231  Q
    |||||| ||| ||||| ||||  ||||||||||||||| | ||||||||||||  |||||||||||||    
T  33005695 aaccaaattgcttgggctccagtggcaaggagctcatttctaggacgtacccgtggaataccgggttc 33005762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 41032068 - 41031998
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||| ||| ||||| ||||  |||||||||||| ||||||||||||||| || ||| |||||||||||||    
T  41032068 aaccaaattgcttgggctccagtggcaaggagctccttccaaggacgtaccagg-gaacaccgggttcgatt 41031998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 34346425 - 34346379
Alignment:
Q  189 caaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||||||||||||| || |||||| ||||| ||||    
T  34346425 caaggagctcattccaaggacgtacctggggaatactgggtttgatt 34346379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 3849051 - 3849006
Alignment:
Q  190 aaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||| ||||| |||||||||| | ||||||||||||||||||||    
T  3849051 aaggagttcatttcaaggacgtatctggagaataccgggttcgatt 3849006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 15234198 - 15234153
Alignment:
Q  190 aaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||| |||||||||||||||||| ||||||  |||||||||    
T  15234198 aaggagctccttccaaggacgtacccggggaatactaggttcgatt 15234153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 16813327 - 16813266
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaatacc 225  Q
    |||| |||||||| || ||||  | |||||||||| |||||||||||||| |||||||||||    
T  16813327 aacctagttgtttaggctccactgacaaggagctccttccaaggacgtactcggagaatacc 16813266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 16852606 - 16852545
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaatacc 225  Q
    |||| |||||||| || ||||  | |||||||||| |||||||||||||| |||||||||||    
T  16852606 aacctagttgtttaggctccactgacaaggagctccttccaaggacgtactcggagaatacc 16852545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 23500846 - 23500774
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||||| |||   |||||||||||| |||||| ||||||  ||| ||||| |||||||||||    
T  23500846 ttaaccaagttgtttgggctccggtggcaaggagctccttccaaagacgta-tcggggaatatcgggttcgatt 23500774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 35946708 - 35946753
Alignment:
Q  190 aaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||| ||||||||| |||| |||||||| ||||||||    
T  35946708 aaggagctcattctaaggacgtatccggggaataccgagttcgatt 35946753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 40969078 - 40969006
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||| ||||| || |  ||||| ||| ||||||||||||||| | | | ||||||||||||||||||    
T  40969078 aaccaagttgcttgggctctagtggcaatgagttcattccaaggacgttctcagggaataccgggttcgattt 40969006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 42770815 - 42770747
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttc 231  Q
    ||||||||||| ||||| ||||  ||||| |||||| ||||||||||||| |||   ||||||||||||    
T  42770815 taaccaagttgcttgggctccagtggcaaagagctccttccaaggacgtatccgagaaataccgggttc 42770747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 47341820 - 47341893
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||| ||||  ||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  47341820 ttaaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaataccgagttcgatt 47341893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 1605887 - 1605959
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||  ||||| | |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  1605887 aaccaagttgtttggactccaatgacaaggagctccttccaaggacgtacccggagaatacctggttcgattt 1605959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 22268192 - 22268121
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||  || |||||||||||||||||    
T  22268192 aaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacttggggaataccgggttcgatt 22268121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 34127783 - 34127712
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||| |||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  34127783 aaccaagttgcttgggctccaatggcaaggaactccttccaaggacgtacccggggaataccgggttcgatt 34127712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 43925458 - 43925529
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  43925458 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 43925529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 14650261 - 14650335
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||||  || |  |||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  14650261 ttaaccaagttgtttggactctagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattt 14650335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 48804628 - 48804700
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||||| ||||  |||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  48804628 taaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatt 48804700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 22973913 - 22973984
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| || || ||| |||||||| |||||||||||||| ||| |||||||||||||||||    
T  22973913 aaccaagttgtttgggctctaatggcgaggagctccttccaaggacgtactcggggaataccgggttcgatt 22973984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 34659174 - 34659243
Alignment:
Q  166 ccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||| ||||  |||||||||||| ||||| ||| |||||||| |||||||||||||||||    
T  34659174 ccaagttgtttgggctccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgatt 34659243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 4228914 - 4228842
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||| ||||  |||||||||||| ||||||||||||| |||  ||||||| ||||||||||    
T  4228914 aaccaagttgtttgggctccagcggcaaggagctccttccaaggacgtatccgaggaataccaggttcgattt 4228842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 18785614 - 18785686
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||  |||| ||||  |||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  18785614 taaccaagttgcatgggctccagtggcaagaagctccttccaaggacgtacccggggaataccgggttcgatt 18785686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 22993530 - 22993459
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||  ||||  |||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  22993530 aaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgatt 22993459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 1797404 - 1797477
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||| ||||||| ||||| ||||  |||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  1797404 ttaatcaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgatt 1797477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 5069975 - 5069906
Alignment:
Q  167 caagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||| ||||  |||||||||||  ||| ||||||||||||||  |||||||||||||||||    
T  5069975 caagttgtttgggctccagtggcaaggagcttcttctaaggacgtacccgggaaataccgggttcgattt 5069906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 10048041 - 10047968
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| |||   ||||  |||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  10048041 ttaaccaagttgcttgaactccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatt 10047968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 45447915 - 45447988
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||| |||||||| |  |||||||||||| |||||||||||||||||   |||||| ||||||||||    
T  45447915 taaccaagttgcttgggttctagtggcaaggagctccttccaaggacgtacccgagaaataccaggttcgattt 45447988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 4195365 - 4195293
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||| ||||| ||||  |||||||||||| | ||||||||||| |||| |||||||| |||||||||    
T  4195365 aaccaagttgcttgggctccagtggcaaggagctcctgccaaggacgtatccggggaataccgagttcgattt 4195293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 26423451 - 26423379
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| ||||  |||||| | ||| ||||||||||||||||   |||||||||||||||||    
T  26423451 taaccaagttgtttgggctccagtggcaagaaactccttccaaggacgtacccaaggaataccgggttcgatt 26423379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 13095804 - 13095871
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttc 231  Q
    |||||||||| ||||| |||   |||||||||||| || ||||||||||||||| |||||||||||||    
T  13095804 aaccaagttgcttgggctcccgtggcaaggagctcctttcaaggacgtacccggggaataccgggttc 13095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 16802069 - 16802140
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||  |||| ||||  ||||| |||||| |||||||||||||||||| ||||||||| |||||||    
T  16802069 aaccaagttgcctgggctccagtggcaatgagctccttccaaggacgtacccggggaataccggattcgatt 16802140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 42032046 - 42032113
Alignment:
Q  168 aagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||   ||||| ||||| |||||||||||||||||| ||||||| |||||||||    
T  42032046 aagttgtttgggctccagtagcaagaagctccttccaaggacgtacccggggaatacctggttcgatt 42032113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 43862135 - 43862064
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| || |  |||||||||||| |||||| |||||| | || |||||||||||||||||    
T  43862135 aaccaagttgtttgggctctagcggcaaggagctctttccaaagacgtatctggggaataccgggttcgatt 43862064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 17748548 - 17748474
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||||| || |  |||||| ||||  |||||||||||||  ||| |||||||||||||||||    
T  17748548 attaaccaagttgtttgggctctagtggcaagcagcttcttccaaggacgtattcggggaataccgggttcgatt 17748474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 9685691 - 9685756
Alignment:
Q  170 gttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||  |||||||||||| ||||||| ||||| |||| ||||| |||||||||||    
T  9685691 gttgtttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgatt 9685756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 24969484 - 24969415
Alignment:
Q  167 caagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||| ||||  |||||||||||  || |||||||||| | ||| |||||||||||||||||    
T  24969484 caagttgtttgggctccagtggcaaggagcttttttcaaggacgtatctggaaaataccgggttcgattt 24969415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 27028225 - 27028297
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||  |||   |||||||||||||||||||| ||||||| ||  |||||| ||||||||||    
T  27028225 aaccaagttgtttggactccggtggcaaggagctcattccaagaacgtacctgggaaataccaggttcgattt 27028297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 37514867 - 37514939
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||  | ||| | |||| ||||| |||||||||| ||||||| |||||| |||||||||||    
T  37514867 aaccaagttgtttggacttcaatgacaagtagctccttccaaggacatacccggggaatactgggttcgattt 37514939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 19914865 - 19914794
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  |||||||||||| |||||||||||||||    |||||| ||||||||||    
T  19914865 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctaaggaatactgggttcgatt 19914794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 21530694 - 21530765
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| || || ||||  |||||||||||| ||||||||||||||| || |||||| ||||| ||||    
T  21530694 aaccaagttgcttcggctccagtggcaaggagctccttccaaggacgtacctggggaatactgggtttgatt 21530765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 42210429 - 42210354
Alignment:
Q  160 cattaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||| || |  ||||  |||||||||||| ||||||||||||| |||  ||||||||| |||||||    
T  42210429 cattaaccaagttgcttagactccagtggcaaggagctctttccaaggacgtatccgaggaataccggcttcgatt 42210354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 43346942 - 43346875
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttc 231  Q
    |||||||||||||||  ||||  |||||||||||| |||||| |||||| | || |||||||||||||    
T  43346942 aaccaagttgtttggactccagtggcaaggagctccttccaaagacgtatctggggaataccgggttc 43346875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 39420782 - 39420847
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgg 227  Q
    |||||||||||| ||||| || |  |||||||||||| || |||||| |||||||| |||||||||    
T  39420782 ttaaccaagttgcttgggctctagtggcaaggagctcctttcaaggaggtacccggggaataccgg 39420847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 4973274 - 4973202
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| ||||  | |||||||||  |||||||||| ||  ||| ||||| |||||||||||    
T  4973274 taaccaagttgtttgggctccactgacaaggagcttcttccaaggacttattcggggaatatcgggttcgatt 4973202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 27875251 - 27875180
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| ||||  |||||| ||||| |||||| |||||| | || ||||||||| |||||||    
T  27875251 taaccaagttgtttgggctccagtggcaagtagctccttccaa-gacgtatctggggaataccggattcgatt 27875180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 31072824 - 31072893
Alignment:
Q  167 caagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||| ||||| |||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  31072824 caagttgtttgggctccaatggcaaggagctcctttcaaggacgtacccggagaataccaggttcgattt 31072893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 15320129 - 15320201
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||  ||||  |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  15320129 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattt 15320201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 35315898 - 35315970
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| ||||  ||||| |||||| |||||||||||||||||||||||| |||||||||||    
T  35315898 taaccaagttgtttgggctccagtggcaaagagctccttccaaggacgtacccggagaatatcgggttcgatt 35315970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 32873712 - 32873642
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  32873712 aaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacccgg-gaataccaggttcgatt 32873642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 42412938 - 42412867
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||| |||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  42412938 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtatccggggaataccgggttcgatt 42412867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 54261169 - 54261240
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  |||||||||||| ||||||||||||||| || |||||||||||||||||    
T  54261169 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgatt 54261240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 26207968 - 26207894
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||| ||||| ||||  |||||||||||| ||||||||| |||||||| |||||||||||||||||    
T  26207968 attaaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgatt 26207894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 11687275 - 11687202
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||||| ||||  |||||| ||||| ||||||||||||||| ||||||||||||||| ||||    
T  11687275 ttaaccaagttgtttgggctccagtggcaagaagctccttccaaggacgtacctggagaataccgggtttgatt 11687202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 25294897 - 25294974
Alignment:
Q  158 aacattaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||| ||||  |||||||||||| ||||||||||||| |||| |||||||||||| ||||    
T  25294897 aacattaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgatt 25294974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 45877396 - 45877469
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||||||| ||||  |||||||||| | ||||||||||||| |||| ||||||||||||||||||    
T  45877396 taaccaagttgtttgggctccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgattt 45877469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 48341961 - 48342030
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttc 231  Q
    |||||||||||||||||| ||||  |||||||||||| ||||||||||||||| || |||||||||||||    
T  48341961 ttaaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttc 48342030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 46530034 - 46529963
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  |||||||||||| || |||||||||||| || |||||||||||||||||    
T  46530034 aaccaagttgtttgggctccagtggcaaggagctcctttcaaggacgtacctggggaataccgggttcgatt 46529963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 10040497 - 10040571
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||| ||||| ||||  |||||||||||| ||| |||||||||||||| ||||| |||||||||||    
T  10040497 attaaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtacccggggaatatcgggttcgatt 10040571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 35923786 - 35923716
Alignment:
Q  165 accaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||| || |  ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  35923786 accaagttgtttgggctctagtggcaatgagctcattccaaggacgtacctggagaataccaggttcgatt 35923716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 13893868 - 13893941
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||||||| ||||  |||||||||||| ||||||||||||  |||| |||||||||||| |||||    
T  13893868 taaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtgtccggggaataccgggttggattt 13893941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 29127861 - 29127934
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||||||| ||||  ||||||||| || ||||||||||||| | || ||||| ||||||||||||    
T  29127861 taaccaagttgtttgggctccagtggcaaggagatccttccaaggacgtatctggggaatatcgggttcgattt 29127934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 51683120 - 51683047
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||||| ||||  ||| |||||||| |||||| |||||| |||| ||||||| |||||||||    
T  51683120 ttaaccaagttgtttgggctccagtggcgaggagctccttccaaagacgtatccggggaataccaggttcgatt 51683047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 30735110 - 30735038
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||| |||||||||||| || |  |||||||||||||||||||||||| || ||| |||||||| ||||||||    
T  30735110 taactaagttgtttgggctctagtggcaaggagctcattccaaggacgcactcggggaataccgagttcgatt 30735038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 41630677 - 41630609
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttc 231  Q
    ||||||||||||||||| ||||  | |||||||||| ||||| ||||||| ||||| ||||||||||||    
T  41630677 taaccaagttgtttgggctccagtgacaaggagctccttccatggacgtaaccggaaaataccgggttc 41630609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 10855325 - 10855399
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||||| ||||  |||||||||||| ||||||||| ||||  ||  ||||||||||| |||||    
T  10855325 ttaaccaagttgtttgggctccagtggcaaggagctccttccaaggatgtacttgggaaataccgggtttgattt 10855399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 928542 - 928614
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||| || || |  ||||||||||||||||||||||||||||  | ||||||| | |||||||    
T  928542 taaccaagttgtttaggctcaactggcaaggagctcattccaaggacgtacctagggaataccagattcgatt 928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 3136853 - 3136785
Alignment:
Q  168 aagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||| |||   |||||| ||||| || ||||||||||||||| ||||||||| ||||||||    
T  3136853 aagttgtttgggctcccgtggcaagaagctcctttcaaggacgtacccggggaataccggattcgattt 3136785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 6462378 - 6462426
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||||||||||| | || |||||||||||||||||    
T  6462378 ggcaaggagctccttccaaggacgtatctggggaataccgggttcgatt 6462426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 7328810 - 7328858
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||| || ||||||||||||||||||  ||||||||||||||||    
T  7328810 ggcaaggagttccttccaaggacgtacccgggaaataccgggttcgatt 7328858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 7613067 - 7613019
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||||||||||||  || |||||||||||||||||    
T  7613067 ggcaaggagctccttccaaggacgtacttggggaataccgggttcgatt 7613019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 7650170 - 7650242
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||||||||  ||||||||| || || |||||| ||||   | ||||||||||||||||||    
T  7650170 aaccaagttgtttgggttccagtggcaaggagttcctttcaaggatgtacttagggaataccgggttcgattt 7650242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 40944825 - 40944897
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||||| |||   |||||| ||||| ||||||||||||| || |||||||||| ||||||||    
T  40944825 taaccaagttgcttgggctccggtggcaagaagctccttccaaggacgtatccagagaataccgagttcgatt 40944897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 49198293 - 49198365
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| ||||  | ||||||| |  |||||||||| || |||| |||||||||||||||||    
T  49198293 taaccaagttgtttgggctccagtgacaaggagtttcttccaaggacatatccggggaataccgggttcgatt 49198365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 52364937 - 52364893
Alignment:
Q  191 aggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||| |||||||||||||||||| |||||||| ||||||||    
T  52364937 aggagctccttccaaggacgtacccggggaataccgagttcgatt 52364893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 7310871 - 7310796
Alignment:
Q  160 cattaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||| ||||| |||   ||||| |||||| ||||||| ||||||| |  |||||||||||||||||    
T  7310871 cattaaccaagttgattgggctccggtggcaatgagctccttccaagaacgtacctgaggaataccgggttcgatt 7310796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 29135856 - 29135927
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||| ||| ||||| ||||  |||||||||||  ||||||||||||| |||| ||||||||| |||||||    
T  29135856 aaccaaattgcttgggctccagtggcaaggagcttcttccaaggacgtatccggggaataccggattcgatt 29135927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 30767414 - 30767339
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||| |||||| ||||| ||||  ||||||||| || ||||||||| ||||| || ||||| ||||||||||||    
T  30767414 attaactaagttgcttgggctccagtggcaaggagttccttccaaggatgtacctggggaatatcgggttcgattt 30767339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 33251605 - 33251676
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| |||   ||||| |||||| |||||||||||||   || |||||||||||||||||    
T  33251605 aaccaagttgtttgggctccggtggcaatgagctccttccaaggacgtattaggggaataccgggttcgatt 33251676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 47471775 - 47471846
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| || |  ||||| |||||| |||||||||||||||  | |||||||||||||||||    
T  47471775 aaccaagttgcttgggctctagtggcaaagagctccttccaaggacgtacctagggaataccgggttcgatt 47471846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 15795628 - 15795586
Alignment:
Q  193 gagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||| |||||||||||||||||| |||||||| ||||||||    
T  15795628 gagctccttccaaggacgtacccggggaataccgagttcgatt 15795586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 49082772 - 49082838
Alignment:
Q  169 agttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||||  |||| ||||||| ||| ||||||||| |||| |||||||| ||||||||    
T  49082772 agttgtttgggctccagtggcagggagctccttctaaggacgtatccggggaataccgagttcgatt 49082838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 33560808 - 33560869
Alignment:
Q  169 agttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggtt 230  Q
    ||||||||||| | ||  |||||||||||| ||||||||| ||||| || ||||||||||||    
T  33560808 agttgtttgggcttcagtggcaaggagctccttccaaggatgtacctggggaataccgggtt 33560869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 10043100 - 10043164
Alignment:
Q  171 ttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||| ||||  ||||| |||||| || |||||||||| |||| ||||| |||||||||||    
T  10043100 ttgtttgggctccactggcaatgagctcctttcaaggacgtatccggggaatatcgggttcgatt 10043164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 35998698 - 35998662
Alignment:
Q  200 ttccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||| |||||||||||||||||||||||| |||||    
T  35998698 ttccaaagacgtacccggagaataccgggtttgattt 35998662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 37092669 - 37092617
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccg 216  Q
    |||||||||| ||||| ||||  |||||||||||  |||||||||||||||||    
T  37092669 aaccaagttgcttgggctccagtggcaaggagcttcttccaaggacgtacccg 37092617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 49543485 - 49543533
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||||||||||| || | ||||| |||||||||||    
T  49543485 ggcaaggagctccttccaaggacgtatcccgggaatatcgggttcgatt 49543533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 53649697 - 53649741
Alignment:
Q  191 aggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||| |||||||||||||  ||| |||||||||||||||||    
T  53649697 aggagctccttccaaggacgtattcggggaataccgggttcgatt 53649741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 33418279 - 33418208
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  |||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  33418279 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtacccggagaataccggattcgatt 33418208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 5855463 - 5855537
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||||| ||||  |||||||||||| |||||||||||||  ||| |||||||||||||||||    
T  5855463 attaaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgatt 5855537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 18915808 - 18915882
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||||| | ||  |||||||||||  |||||||||||||||||| |||||||||||||||||    
T  18915808 attaaccaagttgtttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgatt 18915882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 11398052 - 11397981
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  11398052 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtatccggagaataccgggttcgatt 11397981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 10336458 - 10336532
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||| | |||||||||  |||||||||||| |||||| |||||| |||||||||| ||||||||||||    
T  10336458 ttaaccaagttatctgggttccagtggcaaggagctccttccaaagacgtatccggagaatatcgggttcgattt 10336532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 41664019 - 41663949
Alignment:
Q  165 accaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||| ||||  |||||||||||| ||| ||||||||| |||| |||||||||||||||||    
T  41664019 accaagttgtttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgatt 41663949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 2567223 - 2567292
Alignment:
Q  167 caagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||| | ||  |||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  2567223 caagttgtttgggcttcactggcaaggagctccttccaaggacgtattcggagaataccgggttcgattt 2567292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 9659347 - 9659271
Alignment:
Q  159 acattaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||| |||||| || || ||||  |||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  9659347 acattaactaagttgcttaggctccagtggcaaggagctcattctaaggacgtactcggggaataccgggttcgatt 9659271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 31152660 - 31152732
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||| || |  |||||||||||| ||||||||| |||||| | ||||||||||||||||||    
T  31152660 aaccaagttgtttgggctctagtggcaaggagctctttccaaggatgtacccagggaataccgggttcgattt 31152732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 34334436 - 34334388
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  34334436 ggcaaggagctcattccaaggacgtatccggggaataccgggttcgatt 34334388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 9853440 - 9853370
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||| ||||  |||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  9853440 aaccaagttgtt-gggctccagtggcaaggagctccttccaaggatgtacccggaaaataccgggttcgatt 9853370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 15238270 - 15238199
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||| |||||||||||| |||||||||||||||  | ||||| |||||||||||    
T  15238270 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacctagggaatatcgggttcgatt 15238199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 31576711 - 31576640
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| || |  |||||||||||||||| ||||||||| || || ||||||||||||||||    
T  31576711 aaccaagttgtttgggctctagtggcaaggagctcattctaaggacgtatcccgaaaataccgggttcgatt 31576640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 49078058 - 49078129
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| ||||  |||||||||||| ||| ||||||||| |||| |||||||||||||||||    
T  49078058 aaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgatt 49078129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 10422730 - 10422804
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||||||||| | ||  |||||||||||| |||||| ||||||  ||| ||||||||||||||||||    
T  10422730 ttaaccaagttgtttgggctacagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgattt 10422804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 34719718 - 34719791
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||| | || || || |||||||||||| ||||||||||||||| || |||||| ||||||||||    
T  34719718 ttaaccaagttgtgttggctctaatggcaaggagctccttccaaggacgtacctggggaatactgggttcgatt 34719791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 40288642 - 40288569
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||| ||||| || |  |||||||||||| |||||||||||||  ||| ||||||||||||||||||    
T  40288642 taaccaagttgcttgggctcgagtggcaaggagctctttccaaggacgtattcggggaataccgggttcgattt 40288569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 48798235 - 48798162
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||| ||| ||||  |||||||||||| |||||| |||||| |||| ||||| ||||||||||||    
T  48798235 taaccaagttgttggggctccagtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgattt 48798162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 8763935 - 8764003
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcg 232  Q
    |||||||||| ||||| |||   |||||||||||| |||||||||||||||||| ||||| ||||||||    
T  8763935 aaccaagttgcttgggctcccgtggcaaggagctccttccaaggacgtacccggggaatatcgggttcg 8764003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 45362023 - 45361975
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| |||||||||||||||| | |||||||||||||||||    
T  45362023 ggcaaggagctccttccaaggacgtaccctgggaataccgggttcgatt 45361975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 2981099 - 2981024
Alignment:
Q  160 cattaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||| ||||| || |  |||||||||||| ||||| ||||||| |||| |||||| ||||||||||    
T  2981099 cattaaccaagttgcttgggctctagtggcaaggagctccttccagggacgtatccggggaatactgggttcgatt 2981024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 41743217 - 41743288
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| |||   |||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  41743217 aaccaagttgcttgggctccggtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgatt 41743288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 26258637 - 26258711
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||||| ||| |   | ||||||||| |||||| ||||||||||| ||||||||| |||||||    
T  26258637 attaaccaagttgtttggattcaagtagtaaggagctccttccaaagacgtacccggggaataccggattcgatt 26258711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 892463 - 892390
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||| |||||||||||| | ||  |||||||||||| || ||||||||||  ||| |||||||||||||||||    
T  892463 ttaacgaagttgtttgggcttcagtggcaaggagctcctttcaaggacgtattcggggaataccgggttcgatt 892390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 8905315 - 8905242
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||||||  || |  |||||||||||| |||||| |||||| |||||||||| ||||| ||||||    
T  8905315 taaccaagttgtttggactctagtggcaaggagctccttccaatgacgtatccggagaatatcgggtacgattt 8905242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 16956433 - 16956478
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcg 232  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||    
T  16956433 ggcaaggagctccttccaaggacgtacccggggaataccgtgttcg 16956478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 32142986 - 32142938
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||||||||    
T  32142986 ggcaaagagctcattccaaggacgtaccctg-gaataccgggttcgattt 32142938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 34877928 - 34878005
Alignment:
Q  158 aacattaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||| |||||||||||||||| | ||  |||||||||| | |||||||||||||  ||| ||||||| |||||||||    
T  34877928 aacataaaccaagttgtttgggcttcagtggcaaggagcaccttccaaggacgtattcggggaataccaggttcgatt 34878005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 1764330 - 1764282
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||||||||||||||||  |||||||| |||||||    
T  1764330 ggcaaggagctccttccaaggacgtacccgggaaataccggattcgatt 1764282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 6563408 - 6563456
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||||||| ||||||| |||| |||||||||||||    
T  6563408 ggcaaggagctccttccaaggatgtacccgaagaacaccgggttcgatt 6563456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 42744732 - 42744800
Alignment:
Q  165 accaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcga 233  Q
    ||||||||| ||||  ||||  ||||| |||||| |||||||||||||||| | |||||||||||||||    
T  42744732 accaagttgcttggactccagtggcaatgagctccttccaaggacgtacccagggaataccgggttcga 42744800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 45536688 - 45536724
Alignment:
Q  200 ttccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||| ||||||||||||||||||||||||||||||    
T  45536688 ttccaatgacgtacccggagaataccgggttcgattt 45536724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 32819 - 32886
Alignment:
Q  168 aagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||  ||||| |||||| ||||||||||||||| || ||||| ||||| |||||    
T  32819 aagttgtttgggctccagtggcaatgagctccttccaaggacgtaccgggggaatatcgggtccgatt 32886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 5503975 - 5504046
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||||||||  |||||||||||| |||| || ||||| | || ||||| | |||||||||    
T  5503975 aaccaagttgtttgggttccagtggcaaggagctccttccgagaacgtatctggggaatatcaggttcgatt 5504046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 12036908 - 12036837
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| |||   |||||| ||||| |||||||||||||||  |||||||| ||||| ||||    
T  12036908 aaccaagttgtttgggctccggtggcaagaagctccttccaaggacgtacctagagaatactgggtttgatt 12036837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 17642168 - 17642097
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  | |||||||||| ||||| |||||||||| |  ||||| ||||||||||    
T  17642168 aaccaagttgtttgggctccagtgacaaggagctccttccacggacgtacccaggaaatactgggttcgatt 17642097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 30927894 - 30927819
Alignment:
Q  162 ttaaccaagttgtttgggt-tccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    ||||||||||||||| ||  ||||  |||||||||||| ||||||||||||||| ||  |||| ||||||||||||    
T  30927894 ttaaccaagttgttttggactccagtggcaaggagctccttccaaggacgtacctgggaaatatcgggttcgattt 30927819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 17358638 - 17358564
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||| |||||||||  | |  ||||||||||||||| ||||||||||   || |||||||||||||||||    
T  17358638 attaaccaatttgtttgggagctagtggcaaggagctcatttcaaggacgtatttggggaataccgggttcgatt 17358564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 14254409 - 14254360
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||| |||||||||||||||||  ||| |||||||| |||||||||    
T  14254409 ggcaaggaactcattccaaggacgtattcggggaataccgagttcgattt 14254360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 40226411 - 40226358
Alignment:
Q  159 acattaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgta 212  Q
    |||| |||||||||| ||||||| ||  |||||||||||| |||||||||||||    
T  40226411 acataaaccaagttgattgggtttcagtggcaaggagctccttccaaggacgta 40226358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 10173132 - 10173072
Alignment:
Q  167 caagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgg 227  Q
    ||||||||||||| ||||  ||||||| |||| ||||||||||||| | || |||||||||    
T  10173132 caagttgtttgggctccagtggcaaggtgctccttccaaggacgtatctggggaataccgg 10173072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 32151087 - 32151039
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgt 211  Q
    |||| |||||||||||| ||||  |||||||||||| ||||||||||||    
T  32151087 taacaaagttgtttgggctccagtggcaaggagctccttccaaggacgt 32151039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 47313059 - 47312991
Alignment:
Q  167 caagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||| ||||  ||||| ||| || ||||||||||||| | || |||||||||||| ||||    
T  47313059 caagttgtttgggctccagtggcaacgagatccttccaaggacgtatctggggaataccgggtttgatt 47312991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 516 - 587
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||| ||||| || |  |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  516 aaccaagttgcttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 319391 - 319440
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||||||||||| ||||||||||||| |||| |||||||||||| |||||    
T  319391 ggcaaggagctccttccaaggacgtatccggggaataccgggtttgattt 319440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 412190 - 412118
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||| ||||| | ||  ||| | |||||| ||||||||||||| |||| |||||||| ||||||||    
T  412190 taaccaagttgcttgggcttcagtggcgatgagctccttccaaggacgtatccggggaataccgagttcgatt 412118  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 271214 - 271166
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||    
T  271214 ggcaaggagctccttccaaggacgtacccggagaatatcgggttcgatt 271166  T

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Target: scaffold0005; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 250176 - 250118
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaat 222  Q
    |||||||||| ||||| ||||  ||||||||||||||||||||||||||||||| ||||    
T  250176 aaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaat 250118  T

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Target: scaffold0006 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 68463 - 68534
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| || |  |||||||||||| ||||||||||||||||||  |||| |||||||||||    
T  68463 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgatt 68534  T

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Target: scaffold0332 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 15275 - 15349
Alignment:
Q  162 ttaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||| ||||||||||||| || |  |||||||||||| || |||||| |||||||| ||||||||||||||||||    
T  15275 ttaaacaagttgtttgggctctagtggcaaggagctccttacaaggaagtacccggggaataccgggttcgattt 15349  T

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Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 40990 - 41061
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||||||| ||||  |||||||||||| ||||| |||||||| | | ||||| |||||||||||    
T  40990 aaccaagttgtttgggctccagtggcaaggagctccttccatggacgtactcagggaatatcgggttcgatt 41061  T

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Target: scaffold0376 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 12639 - 12687
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||| ||||| |||||||||||| ||||| |||||||||||||||||    
T  12639 ggcaagaagctccttccaaggacgtgcccggggaataccgggttcgatt 12687  T

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Target: scaffold0341 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 18601 - 18649
Alignment:
Q  187 ggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    |||||||||||| ||||||||| ||||||| |||| |||||||||||||    
T  18601 ggcaaggagctccttccaaggatgtacccgaagaacaccgggttcgatt 18649  T

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Target: scaffold0209 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 12520 - 12592
Alignment:
Q  163 taaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||| || |  |||||||||||  |||||||||||||| ||   ||||||||||||||||    
T  12520 taaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgatt 12592  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 8873 - 8825
Alignment:
Q  164 aaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgta 212  Q
    |||||||||||||||| ||||  |||||||||||| |||||||||||||    
T  8873 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgta 8825  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 25950 - 25876
Alignment:
Q  161 attaaccaagttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgatt 235  Q
    ||||||||||||||||||| ||||   |||| |||||| ||||||| |||||| ||| ||||||  |||||||||    
T  25950 attaaccaagttgtttgggctccagtagcaaagagctccttccaagtacgtactcggggaatacaaggttcgatt 25876  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 95136 - 95070
Alignment:
Q  170 gttgtttgggttccaaaggcaaggagctcattccaaggacgtacccggagaataccgggttcgattt 236  Q
    |||| ||||| ||||| |||||||||||| ||||||| | ||| |||| ||||||| ||||||||||    
T  95136 gttgcttgggctccaatggcaaggagctccttccaagaaagtatccggggaataccaggttcgattt 95070  T

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