View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10438_low_26 (Length: 249)
Name: NF10438_low_26
Description: NF10438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10438_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 112 - 239
Target Start/End: Complemental strand, 32214489 - 32214362
Alignment:
| Q |
112 |
cgccaacattttattcccagtcaactcaaacaatcgactaaacatgtccttcaaattaaggttctccctccaaccatggatcccactaaaataaagtggt |
211 |
Q |
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| T |
32214489 |
cgccaacattttattcccagtcaactcaaacaatcgtctaaacatgtccttcaaattaaggttctccctccaaccatggatcccactaaaataaagtggt |
32214390 |
T |
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| Q |
212 |
taatttgtccccgacatcacgccctttg |
239 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
32214389 |
taatttgtccccgacatcacgccctttg |
32214362 |
T |
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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 23691275 - 23691308
Alignment:
| Q |
175 |
ctccctccaaccatggatcccactaaaataaagt |
208 |
Q |
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||||||||||||| |||||||||||||||||||| |
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| T |
23691275 |
ctccctccaaccaaggatcccactaaaataaagt |
23691308 |
T |
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