View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10438_low_28 (Length: 241)
Name: NF10438_low_28
Description: NF10438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10438_low_28 |
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Alignment Details
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 53039726 - 53039949
Alignment:
| Q |
1 |
cccaacacgtaatcagcctggaagtattagacaagttatcaagttagttgcagataatttcaagccgatactatctctggtccctattataagaaattgt |
100 |
Q |
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| T |
53039726 |
cccaacacgtaatcagcctggaagtattagacaagttatcaagttagttgcagataatttcaagccaatactatctctggtccctattataagaaattgt |
53039825 |
T |
|
| Q |
101 |
gtgtattttttggtctttattataagaaaaagaaattcatttcaatgtgcattaattgctagaattctttttacaccctttatttaatgtcagataaatg |
200 |
Q |
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| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
53039826 |
gcgtattttttggtctttattataagaaaaaaaaattcatttcaatgtgcattaattgctagaattctttttataccctttatttaatgtcagataaatg |
53039925 |
T |
|
| Q |
201 |
tttagtataaatttacatgtaggt |
224 |
Q |
| |
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|||||||||||||||||||||||| |
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| T |
53039926 |
tttagtataaatttacatgtaggt |
53039949 |
T |
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