View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10438_low_31 (Length: 221)

Name: NF10438_low_31
Description: NF10438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10438_low_31
NF10438_low_31
[»] chr7 (30 HSPs)
chr7 (55-152)||(15238556-15238653)
chr7 (63-152)||(3962158-3962247)
chr7 (63-152)||(35445577-35445666)
chr7 (63-152)||(37476876-37476965)
chr7 (63-152)||(15329454-15329543)
chr7 (63-152)||(15577643-15577732)
chr7 (63-152)||(24395151-24395240)
chr7 (71-152)||(25167652-25167733)
chr7 (63-152)||(42611991-42612080)
chr7 (63-152)||(45637891-45637980)
chr7 (63-152)||(18037157-18037246)
chr7 (63-152)||(30848749-30848838)
chr7 (63-152)||(34483018-34483107)
chr7 (63-152)||(35876424-35876513)
chr7 (63-152)||(48880723-48880812)
chr7 (63-151)||(4974532-4974620)
chr7 (63-151)||(20009895-20009984)
chr7 (63-144)||(29737324-29737406)
chr7 (63-152)||(42696263-42696353)
chr7 (77-149)||(15329277-15329350)
chr7 (77-149)||(48880915-48880988)
chr7 (89-152)||(36790272-36790336)
chr7 (77-149)||(4974723-4974796)
chr7 (77-149)||(42611815-42611888)
chr7 (77-149)||(45637716-45637789)
chr7 (88-149)||(3961983-3962045)
chr7 (88-149)||(15577849-15577911)
chr7 (77-149)||(15238386-15238459)
chr7 (77-149)||(37477068-37477141)
chr7 (77-129)||(40880780-40880832)
[»] chr3 (35 HSPs)
chr3 (63-152)||(8361835-8361924)
chr3 (55-152)||(41224406-41224503)
chr3 (55-162)||(9796815-9796922)
chr3 (62-152)||(40328010-40328101)
chr3 (63-152)||(3456244-3456333)
chr3 (63-151)||(33145892-33145980)
chr3 (63-152)||(36864828-36864918)
chr3 (63-152)||(47738291-47738381)
chr3 (63-152)||(3137210-3137299)
chr3 (63-152)||(19650696-19650785)
chr3 (63-152)||(34482684-34482773)
chr3 (63-152)||(48161086-48161175)
chr3 (63-153)||(8320377-8320467)
chr3 (63-152)||(3574322-3574411)
chr3 (63-152)||(6042057-6042146)
chr3 (63-152)||(22426141-22426230)
chr3 (63-152)||(30385580-30385669)
chr3 (63-152)||(33113974-33114063)
chr3 (63-152)||(37216849-37216938)
chr3 (63-152)||(3089599-3089688)
chr3 (63-152)||(37522233-37522322)
chr3 (63-141)||(33839715-33839794)
chr3 (63-152)||(24343729-24343819)
chr3 (63-152)||(2754899-2754988)
chr3 (63-151)||(42921305-42921394)
chr3 (63-153)||(46919074-46919165)
chr3 (63-152)||(26612926-26613016)
chr3 (64-128)||(41883042-41883106)
chr3 (77-149)||(6041888-6041961)
chr3 (63-113)||(42298042-42298092)
chr3 (77-149)||(2754721-2754794)
chr3 (77-141)||(47738117-47738182)
chr3 (77-149)||(3137402-3137475)
chr3 (77-149)||(3574515-3574588)
chr3 (77-141)||(9797017-9797082)
[»] chr5 (29 HSPs)
chr5 (56-152)||(17545478-17545574)
chr5 (55-152)||(22912853-22912950)
chr5 (63-152)||(4892382-4892471)
chr5 (63-152)||(8145553-8145642)
chr5 (63-152)||(33584125-33584214)
chr5 (63-152)||(37321589-37321678)
chr5 (63-152)||(3362959-3363048)
chr5 (63-152)||(3521803-3521892)
chr5 (63-152)||(6043308-6043397)
chr5 (63-152)||(25398418-25398507)
chr5 (63-150)||(12850982-12851069)
chr5 (63-152)||(12614533-12614623)
chr5 (63-152)||(38899521-38899611)
chr5 (63-152)||(2477816-2477905)
chr5 (63-152)||(14138847-14138936)
chr5 (63-122)||(11360957-11361016)
chr5 (63-111)||(4433845-4433893)
chr5 (77-149)||(12614721-12614794)
chr5 (63-115)||(13664739-13664791)
chr5 (77-149)||(22913042-22913115)
chr5 (77-136)||(27482017-27482077)
chr5 (82-128)||(10458423-10458469)
chr5 (166-204)||(23042725-23042763)
chr5 (77-149)||(2477640-2477713)
chr5 (77-149)||(6043499-6043572)
chr5 (77-141)||(8145387-8145452)
chr5 (77-149)||(11361119-11361192)
chr5 (77-149)||(17545673-17545746)
chr5 (78-126)||(31640763-31640811)
[»] chr1 (33 HSPs)
chr1 (55-151)||(40273880-40273976)
chr1 (55-152)||(33786427-33786524)
chr1 (63-152)||(32000062-32000151)
chr1 (63-152)||(37821630-37821719)
chr1 (63-152)||(25973587-25973676)
chr1 (63-152)||(40215168-40215257)
chr1 (63-152)||(51737685-51737774)
chr1 (64-152)||(20304926-20305014)
chr1 (63-152)||(9910087-9910176)
chr1 (63-152)||(19015584-19015673)
chr1 (63-152)||(36966504-36966593)
chr1 (63-152)||(41876238-41876327)
chr1 (63-152)||(44094877-44094966)
chr1 (88-150)||(33786634-33786696)
chr1 (63-152)||(3559797-3559886)
chr1 (63-152)||(6883667-6883756)
chr1 (63-152)||(18404628-18404717)
chr1 (63-152)||(25463856-25463945)
chr1 (77-152)||(19722895-19722970)
chr1 (63-151)||(44690818-44690907)
chr1 (63-152)||(10167579-10167669)
chr1 (92-152)||(52064373-52064434)
chr1 (77-149)||(40273706-40273779)
chr1 (77-149)||(16045786-16045859)
chr1 (77-149)||(32000255-32000328)
chr1 (77-149)||(40214992-40215065)
chr1 (63-152)||(27523051-27523141)
chr1 (77-149)||(9910281-9910354)
chr1 (77-126)||(10167428-10167477)
chr1 (77-149)||(18404446-18404519)
chr1 (77-149)||(44094702-44094775)
chr1 (88-128)||(27523254-27523294)
chr1 (63-115)||(52329455-52329507)
[»] chr4 (45 HSPs)
chr4 (55-151)||(24392846-24392942)
chr4 (63-152)||(53123211-53123300)
chr4 (63-151)||(9089050-9089138)
chr4 (62-152)||(10442583-10442673)
chr4 (63-152)||(21802116-21802205)
chr4 (63-152)||(36073529-36073618)
chr4 (63-152)||(46442024-46442113)
chr4 (63-152)||(11314047-11314137)
chr4 (63-152)||(22199439-22199528)
chr4 (63-152)||(31078615-31078704)
chr4 (63-152)||(33530480-33530569)
chr4 (63-152)||(44893009-44893098)
chr4 (63-152)||(44893606-44893695)
chr4 (63-152)||(47290246-47290335)
chr4 (63-151)||(24128419-24128507)
chr4 (63-152)||(37219811-37219901)
chr4 (63-151)||(17655610-17655699)
chr4 (63-152)||(36073131-36073220)
chr4 (63-152)||(49387683-49387772)
chr4 (66-152)||(42671851-42671938)
chr4 (63-152)||(2625017-2625106)
chr4 (63-152)||(4751627-4751716)
chr4 (63-152)||(7744908-7744997)
chr4 (63-152)||(50156375-50156463)
chr4 (63-126)||(30563389-30563452)
chr4 (63-152)||(44744612-44744698)
chr4 (63-143)||(23964269-23964349)
chr4 (100-152)||(25063370-25063423)
chr4 (154-204)||(42751083-42751133)
chr4 (154-204)||(42760545-42760595)
chr4 (77-149)||(33530676-33530749)
chr4 (63-152)||(36073257-36073347)
chr4 (63-152)||(37934737-37934827)
chr4 (77-149)||(10442777-10442850)
chr4 (77-149)||(22199265-22199338)
chr4 (77-149)||(24128243-24128316)
chr4 (77-149)||(31078807-31078880)
chr4 (77-149)||(49387876-49387949)
chr4 (88-149)||(24392671-24392733)
chr4 (77-149)||(2624841-2624914)
chr4 (77-149)||(7745100-7745173)
chr4 (77-149)||(21802310-21802383)
chr4 (77-149)||(36072951-36073024)
chr4 (77-149)||(47290070-47290143)
chr4 (77-140)||(36073731-36073795)
[»] chr8 (46 HSPs)
chr8 (65-152)||(31347572-31347659)
chr8 (63-153)||(14129039-14129129)
chr8 (63-152)||(6108029-6108118)
chr8 (55-152)||(7017654-7017751)
chr8 (63-151)||(37132477-37132566)
chr8 (63-152)||(1503639-1503728)
chr8 (55-152)||(7022151-7022248)
chr8 (63-152)||(17841646-17841735)
chr8 (63-152)||(25581035-25581124)
chr8 (63-152)||(26041909-26041998)
chr8 (63-152)||(32064926-32065015)
chr8 (63-152)||(40779925-40780014)
chr8 (63-152)||(10044528-10044617)
chr8 (63-152)||(37985852-37985941)
chr8 (63-151)||(20091598-20091686)
chr8 (63-151)||(24211169-24211257)
chr8 (63-151)||(34665561-34665649)
chr8 (63-152)||(1645760-1645849)
chr8 (63-152)||(3596837-3596926)
chr8 (63-152)||(15187740-15187829)
chr8 (63-152)||(30055696-30055785)
chr8 (63-151)||(38017112-38017201)
chr8 (63-152)||(42754838-42754927)
chr8 (63-150)||(3890412-3890500)
chr8 (66-152)||(30834851-30834938)
chr8 (63-126)||(41819590-41819653)
chr8 (73-142)||(39772608-39772677)
chr8 (63-141)||(32394037-32394114)
chr8 (63-115)||(8454013-8454065)
chr8 (63-141)||(35353221-35353299)
chr8 (77-149)||(8453838-8453911)
chr8 (77-149)||(26042104-26042177)
chr8 (77-149)||(32064749-32064822)
chr8 (77-149)||(34665386-34665459)
chr8 (63-152)||(24844656-24844746)
chr8 (77-150)||(24844847-24844920)
chr8 (63-113)||(27835288-27835338)
chr8 (77-122)||(7017853-7017898)
chr8 (77-126)||(15972865-15972914)
chr8 (77-149)||(17841838-17841911)
chr8 (77-149)||(20091789-20091862)
chr8 (77-149)||(27782105-27782178)
chr8 (77-149)||(27835441-27835514)
chr8 (77-149)||(31347770-31347843)
chr8 (77-149)||(40780117-40780190)
chr8 (77-141)||(42755030-42755095)
[»] chr2 (27 HSPs)
chr2 (63-152)||(43331092-43331181)
chr2 (55-151)||(21393483-21393578)
chr2 (63-152)||(9723586-9723676)
chr2 (63-152)||(10662068-10662157)
chr2 (63-152)||(9293371-9293460)
chr2 (63-152)||(22592890-22592982)
chr2 (63-152)||(33380387-33380476)
chr2 (63-152)||(35160939-35161028)
chr2 (63-152)||(7475304-7475393)
chr2 (63-152)||(23267858-23267947)
chr2 (63-149)||(3989256-3989342)
chr2 (63-152)||(13355028-13355117)
chr2 (63-150)||(31174633-31174720)
chr2 (63-113)||(14941199-14941249)
chr2 (63-125)||(16767285-16767347)
chr2 (55-114)||(34320991-34321050)
chr2 (77-149)||(9293564-9293637)
chr2 (63-128)||(37335824-37335889)
chr2 (63-126)||(21936262-21936325)
chr2 (77-149)||(14941354-14941427)
chr2 (77-128)||(27847658-27847709)
chr2 (77-149)||(7475496-7475569)
chr2 (77-149)||(10661891-10661964)
chr2 (77-149)||(21936085-21936158)
chr2 (77-149)||(23268050-23268123)
chr2 (77-149)||(35160761-35160834)
chr2 (77-149)||(43330916-43330989)
[»] chr6 (26 HSPs)
chr6 (55-151)||(11548386-11548482)
chr6 (63-152)||(28675328-28675417)
chr6 (63-152)||(32702385-32702474)
chr6 (63-152)||(17175817-17175906)
chr6 (63-152)||(17705265-17705353)
chr6 (63-152)||(33695122-33695211)
chr6 (63-152)||(33696877-33696966)
chr6 (63-165)||(29693625-29693727)
chr6 (63-152)||(18365370-18365459)
chr6 (63-152)||(18370634-18370723)
chr6 (63-152)||(2309219-2309308)
chr6 (63-152)||(23290877-23290966)
chr6 (88-152)||(34238883-34238947)
chr6 (63-151)||(6031537-6031625)
chr6 (63-126)||(18889466-18889529)
chr6 (77-149)||(18889685-18889757)
chr6 (88-126)||(29693478-29693516)
chr6 (63-112)||(6127457-6127506)
chr6 (77-149)||(17176009-17176082)
chr6 (77-149)||(17705453-17705526)
chr6 (77-149)||(33695315-33695388)
chr6 (77-149)||(33696700-33696773)
chr6 (77-149)||(6127279-6127352)
chr6 (77-149)||(23291072-23291145)
chr6 (77-149)||(28675152-28675225)
chr6 (77-141)||(9752233-9752297)
[»] scaffold0228 (5 HSPs)
scaffold0228 (63-152)||(16164-16253)
scaffold0228 (63-152)||(26116-26205)
scaffold0228 (77-141)||(8414-8479)
scaffold0228 (77-141)||(15996-16061)
scaffold0228 (77-141)||(25948-26013)
[»] scaffold0085 (2 HSPs)
scaffold0085 (63-152)||(48029-48118)
scaffold0085 (77-149)||(47854-47927)
[»] scaffold0471 (2 HSPs)
scaffold0471 (63-151)||(13022-13110)
scaffold0471 (77-149)||(12846-12919)
[»] scaffold0204 (1 HSPs)
scaffold0204 (63-152)||(4576-4665)
[»] scaffold0178 (2 HSPs)
scaffold0178 (63-152)||(11801-11890)
scaffold0178 (77-149)||(11625-11698)
[»] scaffold0096 (2 HSPs)
scaffold0096 (63-152)||(41190-41279)
scaffold0096 (77-149)||(41015-41088)
[»] scaffold0041 (1 HSPs)
scaffold0041 (77-129)||(85451-85503)


Alignment Details
Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 15238556 - 15238653
Alignment:
Q  55 atgaaagaaataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  15238556 atgaaaggaataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttc 15238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 3962158 - 3962247
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||| |||||||||   |||||||||||||||||||||||||||    
T  3962158 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttcttataaaatcattcttgatatctagcattttc 3962247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 35445577 - 35445666
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||||| ||||||   |||||||||||||||||||||||||||    
T  35445577 aataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35445666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||| | ||||||||||| ||||||||| || ||| ||||||||||||||||||||||||||||||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 15329454 - 15329543
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||   ||||||||||| |||||||||||||||    
T  15329454 aataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttcttataaaatcattctttatatctagcattttc 15329543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 15577732 - 15577643
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||| || ||||||   |||||||||||||||||||||||||||    
T  15577732 aataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 15577643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 24395151 - 24395240
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||| ||   |||||||||||||||||||||||||||    
T  24395151 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcattttc 24395240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 25167733 - 25167652
Alignment:
Q  71 agactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  25167733 agactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25167652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 42611991 - 42612080
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||  || ||||||   |||||||||||||||||||||||||||    
T  42611991 aataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 42612080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 45637891 - 45637980
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   ||||||||||| |||||||||||||||    
T  45637891 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 45637980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 18037157 - 18037246
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    |||||||  ||||||||||||| | ||||||||||  |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttc 18037246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 30848749 - 30848838
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||| ||||| ||||||||||| |||||||||||||||| ||||||   ||| |||||||||||||||||||||||    
T  30848749 aataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaagcattcttgatatctagcattttc 30848838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 34483018 - 34483107
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| ||| |||||||||||| ||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||| |||||||    
T  34483018 aataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 34483107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 35876424 - 35876513
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||| ||  |||||||||   |||||||||||||||||||||||||||    
T  35876424 aataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttc 35876513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 48880812 - 48880723
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| | |||||||||||||  ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  48880812 aataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 48880723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 4974620 - 4974532
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 151  Q
    ||||||| |||||||||||||| | ||||||||||| |||||||||||||||| ||| ||   ||||||||||||||||||||||||||    
T  4974620 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 20009984 - 20009895
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatttt 151  Q
    ||||||| ||||| ||||||||  ||||||||||||||||||||||||||||| ||| ||||| ||||||||| ||||||||| ||||||    
T  20009984 aataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 29737324 - 29737406
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatcta 144  Q
    ||||||| |||||||||||||| | ||||||||||| ||||| |||||| ||| ||||||||| |||||||||||||||||||    
T  29737324 aataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 42696263 - 42696353
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||| | ||||||||||  |||||||||||||||| ||| ||||| |||||||| |||||||||| |||||||    
T  42696263 aataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttc 42696353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 15329350 - 15329277
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| ||||||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 48880915 - 48880988
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| ||||||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 48880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 36790336 - 36790272
Alignment:
Q  89 gattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    ||||||||||||||||||||||||||| ||| ||||| ||| |||| ||||||| ||||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttc 36790272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 4974723 - 4974796
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 42611888 - 42611815
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 45637789 - 45637716
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 45637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 3962045 - 3961983
Alignment:
Q  88 tgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| ||||||||||||||| ||  ||||||||| ||||| |||||||||| |||||||    
T  3962045 tgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3961983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 15577849 - 15577911
Alignment:
Q  88 tgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  15577849 tgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15577911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 15238459 - 15238386
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaa-tcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||| |||||||| ||| |  |||||||||| |||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcatt 15238386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 37477068 - 37477141
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttga-taaatcattcttgatatctagcatt 149  Q
    |||| ||| |||||||||| || |||||||||||| ||| ||||||||  ||||| |||||||||| |||||||    
T  37477068 aaatttaaggatgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcatt 37477141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 40880780 - 40880832
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaat 129  Q
    |||| ||| |||||||||| || |||||||||||||| | |||||||||||||    
T  40880780 aaatttaaggatgattattctgccatgtcattcttgagtttttcttgataaat 40880832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 8361924 - 8361835
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 8361835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 41224406 - 41224503
Alignment:
Q  55 atgaaagaaataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||||||||||| ||| |||||| ||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41224406 atgaaagaaataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 41224503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 55 - 162
Target Start/End: Complemental strand, 9796922 - 9796815
Alignment:
Q  55 atgaaagaaataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcac 154  Q
    ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  9796922 atgaaaggaataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttccc 9796823  T
Q  155 ttaaaaaa 162  Q
     |||||||    
T  9796822 ataaaaaa 9796815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 40328010 - 40328101
Alignment:
Q  62 aaataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  40328010 aaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttc 40328101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 3456244 - 3456333
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  3456244 aataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 3456333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 33145892 - 33145980
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 151  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  33145892 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 36864918 - 36864828
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||| | |||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||    
T  36864918 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcattttc 36864828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 47738291 - 47738381
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  47738291 aataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttc 47738381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 3137299 - 3137210
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  3137299 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 3137210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 19650785 - 19650696
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||   |||||||||||||||||||||||||||    
T  19650785 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 19650696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 34482773 - 34482684
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  34482773 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 34482684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 48161086 - 48161175
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |||||| |||||||||   |||||||||||||||||||||||||||    
T  48161086 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagcattttc 48161175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 8320467 - 8320377
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttca 153  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||| |||||||||||||||||||    
T  8320467 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagcattttca 8320377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 3574411 - 3574322
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||| || ||||||   |||||||||||||||||||||||||||    
T  3574411 aataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 3574322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 6042057 - 6042146
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||| || ||||||   |||||||||||||||||||||||||||    
T  6042057 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 6042146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 22426230 - 22426141
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||  ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  22426230 aataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 22426141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 30385580 - 30385669
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||| ||||||||||    
T  30385580 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatttagcattttc 30385669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 33113974 - 33114063
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| ||| |||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  33113974 aataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 33114063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 37216938 - 37216849
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  37216938 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 37216849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 3089599 - 3089688
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||  || ||||||   |||||||||||||||||||||||||||    
T  3089599 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 3089688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 37522233 - 37522322
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| |||||||| || |||||||||||| ||| ||||||   |||||||||||||||||||||||||||    
T  37522233 aataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 37522322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 33839715 - 33839794
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatat 141  Q
    ||||||| |||||||||| ||| | |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  33839715 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 24343729 - 24343819
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    |||||||||||||||||||||| | |||||||  | ||||||||||||||||| ||| ||||| ||||||||||||||||||| |||||||    
T  24343729 aataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttc 24343819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 2754899 - 2754988
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||| ||||| ||||||||||| |||||||||||| ||| ||||||   |||| ||||||||||||||||||||||    
T  2754899 aataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagcattttc 2754988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 42921305 - 42921394
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatttt 151  Q
    ||||||| |||||||||| ||| | ||||| ||||| |||||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  42921305 aataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 46919074 - 46919165
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttca 153  Q
    |||||||||||| |||||||| || |||||||| || ||||||||| |||||| ||| ||||| ||||||||||||||||||| ||||||||    
T  46919074 aataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacattttca 46919165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 26612926 - 26613016
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||| | ||||||||||| ||||| |||||||||| |||||| || |||||||| |||||||||| |||||||    
T  26612926 aataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacattttc 26613016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 41883106 - 41883042
Alignment:
Q  64 ataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaa 128  Q
    |||||||||||||||||| ||||||||||||| |  |||||||||||||||| |||||| |||||    
T  41883106 ataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttcataaa 41883042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 6041961 - 6041888
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| ||||||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6041888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 42298042 - 42298092
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttga 113  Q
    ||||||| |||||||||||||| | || |||||||||||||||||||||||    
T  42298042 aataaatgagactgaaatctaagggtggttattgtgtcatgtcattcttga 42298092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 2754794 - 2754721
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||||| |||||||| || |||||||||||| ||  ||||||||| ||||| |||||||||| |||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatat 141  Q
    |||||||||| | |||||| || ||| |||||||||||||||||||||| ||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 3137402 - 3137475
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttg-ataaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||| | ||||| |||||||||| |||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 3137475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 3574515 - 3574588
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||| ||  ||||||||| ||||| |||||||||| |||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 9797017 - 9797082
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttga-taaatcattcttgatat 141  Q
    |||||||| | |||||||| || |||||||||||||||| ||||||||  ||||| ||||||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 7e-36; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 17545574 - 17545478
Alignment:
Q  56 tgaaagaaataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    |||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  17545574 tgaaaggaataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttc 17545478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 22912950 - 22912853
Alignment:
Q  55 atgaaagaaataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    |||| |||||||||| |||||||||||||| | ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22912950 atgagagaaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttc 22912853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 4892382 - 4892471
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  4892382 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 4892471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 8145553 - 8145642
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  8145553 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 8145642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 33584214 - 33584125
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  33584214 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 33584125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 37321678 - 37321589
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| ||| |||||||||||||||||||   |||||||||||||||||||||||||||    
T  37321678 aataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttcttataaaatcattcttgatatctagcattttc 37321589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 3362959 - 3363048
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| || ||||||||||||||||||||| ||| ||||||   |||||||||||||||||||||||||||    
T  3362959 aataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 3521892 - 3521803
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||| ||| ||||||   |||||||||||||||||||||||||||    
T  3521892 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3521803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 6043397 - 6043308
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||| ||| ||||||   |||||||||||||||||||||||||||    
T  6043397 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 6043308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 25398418 - 25398507
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||| |||||| ||||||   |||||||||||||||||||||||||||    
T  25398418 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttcttataaaatcattcttgatatctagcattttc 25398507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 12850982 - 12851069
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattt 150  Q
    ||||||| |||||||||||||||| || |||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||    
T  12850982 aataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 12614623 - 12614533
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||| ||| ||| ||||| ||||||| |||||||||||||||||||    
T  12614623 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcattttc 12614533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 38899611 - 38899521
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| || |||||||| |||||||||||||||| ||| || || |||||||||||||||||||||||||||    
T  38899611 aataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcattttc 38899521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 2477816 - 2477905
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||||  || ||||||   |||||||||||||||||||||||||||    
T  2477816 aataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 2477905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 14138847 - 14138936
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| ||| |||||||||||| ||||||||||| |||||||||||||||| ||||||   ||||||||||| |||||||||||||||    
T  14138847 aataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 14138936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 11361016 - 11360957
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttctt 122  Q
    ||||||| ||| |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  11361016 aataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttctt 11360957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 4433893 - 4433845
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattctt 111  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  4433893 aataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 12614721 - 12614794
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||||| ||||  |||||||||| |||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 13664739 - 13664791
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaat 115  Q
    |||||||||||||||||||||| | |||||||| | |||||||||||||||||    
T  13664739 aataaataagactgaaatctaagggtgattattctatcatgtcattcttgaat 13664791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 22913042 - 22913115
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttg-ataaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||| ||||||| | ||||| |||||||||| |||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcatt 22913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 27482017 - 27482077
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattctt 136  Q
    |||||||||| |||||||| ||| ||||||||||||||| ||| ||||| |||||||||||    
T  27482017 aaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 10458469 - 10458423
Alignment:
Q  82 taaagatgattattgtgtcatgtcattcttgaatatttcttgataaa 128  Q
    ||||| |||||||| || |||||||||||||||| ||||||||||||    
T  10458469 taaaggtgattattttgccatgtcattcttgaatttttcttgataaa 10458423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 23042763 - 23042725
Alignment:
Q  166 gtagaaaatgcagcagtaacctaaatcaatacccctaat 204  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  23042763 gtagaaaatgcagcagtaacctaaataaataccactaat 23042725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 2477713 - 2477640
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||| ||  ||||||||| ||||| |||||||||| |||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2477640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 6043499 - 6043572
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| |  |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatat 141  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| ||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 11361119 - 11361192
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||| ||  ||||||||| ||||| |||||||||| |||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11361192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 17545673 - 17545746
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaa-tcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||| |||||||| ||| |  |||||||||| |||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcatt 17545746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 31640811 - 31640763
Alignment:
Q  78 aatctaaagatgattattgtgtcatgtcattcttgaatatttcttgata 126  Q
    |||||||||  ||||||| || |||||||||||||||| ||||||||||    
T  31640811 aatctaaagtcgattattctgccatgtcattcttgaatctttcttgata 31640763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 7e-36; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 40273880 - 40273976
Alignment:
Q  55 atgaaagaaataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 151  Q
    ||||||| ||||||| |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40273880 atgaaaggaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 33786524 - 33786427
Alignment:
Q  55 atgaaagaaataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| ||||||| |||||||||||||| | ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33786524 atgaaaggaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttc 33786427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 32000151 - 32000062
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||| | ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttc 32000062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 37821719 - 37821630
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  37821719 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 37821630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 25973587 - 25973676
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  25973587 aataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25973676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 40215168 - 40215257
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  40215168 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 51737685 - 51737774
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  51737685 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 51737774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 20305014 - 20304926
Alignment:
Q  64 ataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  20305014 ataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 20304926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 9910176 - 9910087
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||| |||||||    
T  9910176 aataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttc 9910087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 19015584 - 19015673
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||| ||||||||||    
T  19015584 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatgtagcattttc 19015673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 36966593 - 36966504
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| ||||| |||||||||| ||||||   |||||||||||||||||||||||||||    
T  36966593 aataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaatttttcttataaaatcattcttgatatctagcattttc 36966504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 41876327 - 41876238
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| |||||||||||  ||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  41876327 aataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 41876238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 44094877 - 44094966
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||   |||| ||||||||||||||||||||||    
T  44094877 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaataattcttgatatctagcattttc 44094966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 33786634 - 33786696
Alignment:
Q  88 tgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattt 150  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33786634 tgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 3559797 - 3559886
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||| ||||| ||||||||||||||| ||||||||| || ||||||   |||||||||||||||||||||||||||    
T  3559797 aataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 3559886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 6883667 - 6883756
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||| |||| || |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  6883667 aataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 6883756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 18404628 - 18404717
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||  ||||||||||| |||||||||||| ||| ||||||   |||||||||||||||||||||||||||    
T  18404628 aataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 18404717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 25463856 - 25463945
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| ||||| |||||||||| ||||||||||| ||||||||||||| || ||||||   |||||||||||||||||||||||||||    
T  25463856 aataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 25463945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 19722970 - 19722895
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||   ||||||||||||||||||| |||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 19722895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 44690907 - 44690818
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatttt 151  Q
    |||||||||||||| ||||||| | |||||||| || |||||||||||||||| ||||||||| |||||||| |||||||||| ||||||    
T  44690907 aataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 10167579 - 10167669
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    |||||||||||||||||||||||| |||||||||| |||| | |||||| ||||||| || || ||||||||||| |||| || |||||||    
T  10167579 aataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacattttc 10167669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 52064434 - 52064373
Alignment:
Q  92 tattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    |||| ||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  52064434 tattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttg-ataaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||| ||||||| | ||||| ||||||||||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 16045786 - 16045859
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 32000255 - 32000328
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttga-taaatcattcttgatatctagcatt 149  Q
    |||||||| | || ||||| ||||||||||||||||||| ||||||||  ||||| |||||||||| |||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 32000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 40215065 - 40214992
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 27523141 - 27523051
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaa-tcattcttgatatctagcattttc 152  Q
    ||||||||||||| ||||| || | |||||| | || |||   |||||||||| |||||||||||| ||||||||||||| || |||||||    
T  27523141 aataaataagactaaaatcaaagggtgattaatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttc 27523051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 9910281 - 9910354
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttg-ataaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||| | ||||| |||||||||| |||||||    
T  9910281 aaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 9910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 10167477 - 10167428
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgata 126  Q
    ||||||||| ||||||||| | ||||||||||||| ||| ||||||||||    
T  10167477 aaatctaaaaatgattattctatcatgtcattcttaaatctttcttgata 10167428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 18404519 - 18404446
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||||| |||||||| |  |||||||||||| ||  ||||||||| ||||| |||||||||| |||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 18404446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 44094775 - 44094702
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||  |||||||||| |||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 44094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 27523254 - 27523294
Alignment:
Q  88 tgattattgtgtcatgtcattcttgaatatttcttgataaa 128  Q
    |||||||| ||||||||||||||| ||| ||||||||||||    
T  27523254 tgattattctgtcatgtcattcttaaatttttcttgataaa 27523294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 52329455 - 52329507
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaat 115  Q
    ||||| |||||||||||||||| | |||||||| ||  |||||||||||||||    
T  52329455 aataattaagactgaaatctaagggtgattattctgctatgtcattcttgaat 52329507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 24392846 - 24392942
Alignment:
Q  55 atgaaagaaataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 151  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24392846 atgaaaggaataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 53123211 - 53123300
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  53123211 aataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 53123300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 9089050 - 9089138
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 151  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  9089050 aataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 10442673 - 10442583
Alignment:
Q  62 aaataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    |||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  10442673 aaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10442583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 21802205 - 21802116
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||| | |||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  21802205 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 21802116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 36073529 - 36073618
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  36073529 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 36073618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 46442024 - 46442113
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  46442024 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 46442113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 11314137 - 11314047
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    |||||||||||||  ||||||| | ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  11314137 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttc 11314047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 22199439 - 22199528
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||| || ||||||   |||||||||||||||||||||||||||    
T  22199439 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 22199528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 31078704 - 31078615
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| ||| |||||||||||||||||||||||| |||||||||||||||| ||| ||   |||||||||||||||||||||||||||    
T  31078704 aataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaattttttttataaaatcattcttgatatctagcattttc 31078615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 33530569 - 33530480
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| || ||| ||   |||||||||||||||||||||||||||    
T  33530569 aataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttc 33530480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 44893098 - 44893009
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||| ||| ||||||   |||||||||||||||||||||||||||    
T  44893098 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 44893009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 44893606 - 44893695
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||| ||| ||||||   |||||||||||||||||||||||||||    
T  44893606 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 44893695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 47290246 - 47290335
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  47290246 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 47290335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 24128419 - 24128507
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 151  Q
    ||||||| |||||||||||||||| | |||||||||||||||||||||| ||| ||||||   ||||||||||||||||||||||||||    
T  24128419 aataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 37219811 - 37219901
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    ||||||||||| |||||||||| |||||||||| || |||||||||||| ||| ||||||||| ||||||||||||||||||| |||||||    
T  37219811 aataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacattttc 37219901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 17655610 - 17655699
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatttt 151  Q
    ||||||| |||||||||||||||| | |||||| ||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||    
T  17655610 aataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 36073131 - 36073220
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| || |||||||| |||||||||||||||| ||||||   |||||||| ||||||||||||||||||    
T  36073131 aataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagcattttc 36073220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 49387772 - 49387683
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   ||||||| ||||||||||| |||||||    
T  49387772 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcatccttgatatctaacattttc 49387683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 152
Target Start/End: Original strand, 42671851 - 42671938
Alignment:
Q  66 aaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    |||| ||||| ||||||||  ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  42671851 aaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttc 42671938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 2625017 - 2625106
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| |||||||||||  |||||||| |||||| ||||||   ||||||||||||||||||| |||||||    
T  2625017 aataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttcttataaaatcattcttgatatctaacattttc 2625106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 4751627 - 4751716
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| || |||||||| |||||||||||| ||| ||||||   |||| ||||||||||||||||||||||    
T  4751627 aataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttcttataaaattattcttgatatctagcattttc 4751716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 7744997 - 7744908
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| ||| |||||||||||| |||||||||||  ||||||||||||||| ||||||   ||||||||||||||||||| |||||||    
T  7744997 aataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 7744908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 50156463 - 50156375
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||| | |||||||| ||||||||||||||||||| ||||||   ||||||||||||||||||| |||||||    
T  50156463 aataaatgagactgaaatctaagg-tgattattatgtcatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttc 50156375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 30563389 - 30563452
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgata 126  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||||||| ||||||||||    
T  30563389 aataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaatctttcttgata 30563452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 44744612 - 44744698
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||||||||    ||||||| |||||||| |||||||||| |||||||    
T  44744612 aataaataagactgaaatctaaggataattattgagtcatgtcattcttgaa----tcttgataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 23964349 - 23964269
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatct 143  Q
    ||||||| ||| ||||||||||||||||||||| || |||||||||||| ||| ||||||   ||||||||||||||||||    
T  23964349 aataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 25063423 - 25063370
Alignment:
Q  100 catgtcattcttgaatatttcttgataaa-tcattcttgatatctagcattttc 152  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  25063423 catgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttc 25063370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 42751083 - 42751133
Alignment:
Q  154 cttaaaaaatttgtagaaaatgcagcagtaacctaaatcaatacccctaat 204  Q
    |||||| ||||||||||||||||||||||||||||||| |||||| |||||    
T  42751083 cttaaacaatttgtagaaaatgcagcagtaacctaaataaataccactaat 42751133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 42760545 - 42760595
Alignment:
Q  154 cttaaaaaatttgtagaaaatgcagcagtaacctaaatcaatacccctaat 204  Q
    |||||| ||||||||||||||||||||||||||||||| |||||| |||||    
T  42760545 cttaaacaatttgtagaaaatgcagcagtaacctaaataaataccactaat 42760595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 33530676 - 33530749
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||| ||||||||| ||||| |||||||||| |||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcatt 33530749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 36073347 - 36073257
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    ||||||||||||||||||||||   | |||||| || ||| |||||||| ||| ||||||||| |||||||| ||  ||||||||||||||    
T  36073347 aataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttc 36073257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 37934827 - 37934737
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    ||||||| ||| |||||||||| | ||||||||||||||| ||||| |||||| |||||| || |||||| || | ||||||| |||||||    
T  37934827 aataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacattttc 37934737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 10442777 - 10442850
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 10442850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 22199338 - 22199265
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 24128316 - 24128243
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttg-ataaatcattcttgatatctagcatt 149  Q
    |||||||| |||||||||| || |||||||||||||||  ||||||| | ||||| |||||||||| |||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 24128243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 31078807 - 31078880
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 31078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 49387876 - 49387949
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 24392733 - 24392671
Alignment:
Q  88 tgattattgtgtcatgtcattcttgaatatttcttga-taaatcattcttgatatctagcatt 149  Q
    |||||||| || |||||||||||||||| ||||||||  ||||| |||||||||| |||||||    
T  24392733 tgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 24392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 2624914 - 2624841
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || ||| |||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcatt 2624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 7745100 - 7745173
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||| ||  ||||||||| ||||| |||||||||| |||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 7745173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 21802310 - 21802383
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||  |||||||||| |||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 21802383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 36073024 - 36072951
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | || ||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 36072951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 47290143 - 47290070
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttg-ataaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||| | ||||| |||||||||| |||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 47290070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgata 140  Q
    |||||||||  |||||||| ||||||||||||||| ||| |||||| || ||||| |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 6e-33; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 31347659 - 31347572
Alignment:
Q  65 taaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttc 31347572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 14129039 - 14129129
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttca 153  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  14129039 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttataaaatcattcttgatatctagcattttca 14129129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 6108118 - 6108029
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  6108118 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 6108029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 7017751 - 7017654
Alignment:
Q  55 atgaaagaaataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| ||||||| |||||||||||||| |||||||||| |   ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7017751 atgaaaggaataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcattttc 7017654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 37132566 - 37132477
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatttt 151  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||    
T  37132566 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 1503728 - 1503639
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  1503728 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 1503639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 7022151 - 7022248
Alignment:
Q  55 atgaaagaaataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| ||||||| |||||||||||||| |  |||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  7022151 atgaaaggaataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttc 7022248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 17841735 - 17841646
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  17841735 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 17841646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 25581124 - 25581035
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| |||||||||||| ||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  25581124 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25581035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 26041998 - 26041909
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  26041998 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 26041909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 32064926 - 32065015
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||| ||| ||||||   |||||||||||||||||||||||||||    
T  32064926 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 32065015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 40780014 - 40779925
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  40780014 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 40779925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 10044528 - 10044617
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| ||| |||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  10044528 aataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10044617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 37985941 - 37985852
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    |||||||  ||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  37985941 aataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 37985852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 20091686 - 20091598
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 151  Q
    ||||||| |||||||||||||| | ||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  20091686 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 24211257 - 24211169
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 151  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||| || ||||||   ||||||||||||||||||||||||||    
T  24211257 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 34665561 - 34665649
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 151  Q
    ||||||| |||||||||||||| | ||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  34665561 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 1645849 - 1645760
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||  | ||||||   |||||||||||||||||||||||||||    
T  1645849 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttcttataaaatcattcttgatatctagcattttc 1645760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 3596926 - 3596837
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| ||| |||||||| ||| ||||||   |||||||||||||||||||||||||||    
T  3596926 aataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3596837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 15187740 - 15187829
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| |||||||||||  |||||||||||| || ||||||   |||||||||||||||||||||||||||    
T  15187740 aataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 15187829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 30055696 - 30055785
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| ||||| |||||||| | |||||||||||||||||||||||||||| ||||||   ||||||||||| |||||||||||||||    
T  30055696 aataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 30055785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 38017112 - 38017201
Alignment:
Q  63 aataaataagactgaaatctaaagatga-ttattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 151  Q
    ||||||| |||||||||||||||| | | ||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  38017112 aataaatgagactgaaatctaaaggtaaattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 42754927 - 42754838
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||| ||| ||||||   |||||||||||||||||||||||||||    
T  42754927 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 42754838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 150
Target Start/End: Complemental strand, 3890500 - 3890412
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattt 150  Q
    ||||||||||| | |||||||| | |||||||| || ||| |||||||||||| ||||||||| |||||||||||||||||||||||||    
T  3890500 aataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 30834938 - 30834851
Alignment:
Q  66 aaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    |||||| |||||||||||| | || ||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||||| |||||||    
T  30834938 aaataacactgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttc 30834851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 41819653 - 41819590
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgata 126  Q
    ||||||| |||||||||||||| | |||||||||||||||||||||||||||| ||||||||||    
T  41819653 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgata 41819590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 39772677 - 39772608
Alignment:
Q  73 actgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatc 142  Q
    |||||||||||||| ||||||||||||||||||||||||| || ||||||   |||||||||||||||||    
T  39772677 actgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 32394037 - 32394114
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatat 141  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||| ||   ||||||||||||||||    
T  32394037 aataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 8454013 - 8454065
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaat 115  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||||||    
T  8454013 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 8454065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 35353221 - 35353299
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatat 141  Q
    ||||||| ||| | |||| ||||| ||||||||||| |||||||||||||||| ||||||   ||||||||||||||||    
T  35353221 aataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 8453911 - 8453838
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttg-ataaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| ||||||||||||||||||  ||||||| | ||||| |||||||||| |||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 8453838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 26042104 - 26042177
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| ||||||||||||||||||  ||||||||| ||||| ||||| |||| |||||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcatt 26042177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 32064822 - 32064749
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 32064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 34665459 - 34665386
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 24844746 - 24844656
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    ||||| ||||| | ||||||||   |||||||| || |||| ||||||| ||| ||||||||| |||||||| |||||||||| |||||||    
T  24844746 aataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacattttc 24844656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 24844847 - 24844920
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattt 150  Q
    |||||||| | |||||||| ||||||||||||||||||| |||||| || ||||  |||||||||| ||||||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcattt 24844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 27835338 - 27835288
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttga 113  Q
    ||||||| ||| |||||||||| ||||||||||||||||| ||||| ||||    
T  27835338 aataaatgagattgaaatctaaggatgattattgtgtcatatcatttttga 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 7017853 - 7017898
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttctt 122  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  7017853 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 7017898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 15972865 - 15972914
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgata 126  Q
    |||||||| | |||||||| ||||||||||||||| ||| ||||||||||    
T  15972865 aaatctaagggtgattattctgtcatgtcattcttcaatctttcttgata 15972914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 17841838 - 17841911
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttg-ataaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||| | ||||| |||||||||| |||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 17841911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 20091789 - 20091862
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||  |||||||||| |||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 20091862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 27782105 - 27782178
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || ||||||||| |||||| ||||||||| ||||  |||||||||| |||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcatt 27782178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 27835441 - 27835514
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataa-atcattcttgatatctagcatt 149  Q
    |||||||| |||||||||| |  |||||||||||||||| |||||| |||| ||| || ||||||| |||||||    
T  27835441 aaatctaaggatgattattttaccatgtcattcttgaatttttcttaataagatctttattgatatatagcatt 27835514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 31347770 - 31347843
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttga-taaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||| ||||||||  ||||  |||||||||| |||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcatt 31347843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 40780117 - 40780190
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttg-ataaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||| | ||||| |||||||||| |||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 40780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatat 141  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 43331092 - 43331181
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttc 43331181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 21393578 - 21393483
Alignment:
Q  55 atgaaagaaataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 151  Q
    ||||||| ||||||| |||||||||| ||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21393578 atgaaaggaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgataaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 9723586 - 9723676
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttc 9723676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 10662068 - 10662157
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  10662068 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 10662157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 9293460 - 9293371
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||| | |||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  9293460 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 9293371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 22592890 - 22592982
Alignment:
Q  63 aataaataagactgaaa--tctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    |||||||||||||||||  ||||| | |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  22592890 aataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttc 22592982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 33380387 - 33380476
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  33380387 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 33380476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 35160939 - 35161028
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  35160939 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35161028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 7475393 - 7475304
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| |||||||| |||||| |||||||||||| ||||||   |||||||||||||||||||||||||||    
T  7475393 aataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 7475304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 23267947 - 23267858
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||| ||| ||||||   |||||||||||||||||||||||||||    
T  23267947 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 23267858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 3989256 - 3989342
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatt 149  Q
    ||||||| |||||||||||||||| | ||||||||||||||||||||||| || ||||||   ||||||||||||||||||||||||    
T  3989256 aataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 13355028 - 13355117
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||  ||||||||||| ||||||||||||| || ||||||   |||||||||||||||||||||||||||    
T  13355028 aataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 13355117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 150
Target Start/End: Complemental strand, 31174720 - 31174633
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattt 150  Q
    ||||||| ||| ||||||||||||  | ||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||    
T  31174720 aataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 14941249 - 14941199
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttga 113  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  14941249 aataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 16767347 - 16767285
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat 125  Q
    ||||||| ||||||||||||||   |||||||||||||||||||||||||||| |||||||||    
T  16767347 aataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttcttgat 16767285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 34321050 - 34320991
Alignment:
Q  55 atgaaagaaataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaa 114  Q
    ||||||| ||||||| |||||||||||||| | ||||||||||| |||||||||||||||    
T  34321050 atgaaaggaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 34320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 9293564 - 9293637
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || ||||||||||||||| |||||||||| ||||| |||||||||| |||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcatt 9293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 37335824 - 37335889
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaa 128  Q
    ||||||| |||||||||||||| | |||||| |||||||||||||| || ||| ||||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaa 37335889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 21936262 - 21936325
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgata 126  Q
    ||||||| | |||||||||||||| ||||||||||| ||||||||||||| ||  |||||||||    
T  21936262 aataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttggatcattcttgata 21936325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 14941354 - 14941427
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||| |||||| || ||||| |||||||||| |||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcatt 14941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 27847709 - 27847658
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaa 128  Q
    |||||||| | |||||||| ||||||||||||||||||| |||||| |||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaa 27847658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 7475496 - 7475569
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttg-ataaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| | ||||||||||||||||  ||||||| | ||||| |||||||||| |||||||    
T  7475496 aaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 7475569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 10661964 - 10661891
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||| ||  ||||||||| ||||| |||||||||| |||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 10661891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 21936158 - 21936085
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || ||| |||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 21936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 23268050 - 23268123
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttg-ataaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||| | ||||| |||||||||| |||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 23268123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 35160834 - 35160761
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||| ||  ||||||||| ||||| |||||||||| |||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 35160761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 43330989 - 43330916
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttga-taaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||| ||| ||||  ||||| |||||||||| |||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcatt 43330916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 11548482 - 11548386
Alignment:
Q  55 atgaaagaaataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 151  Q
    ||||||| ||||||| |||||||||||||| | ||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  11548482 atgaaaggaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 28675328 - 28675417
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||| | |||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  28675328 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 28675417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 32702385 - 32702474
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| | |||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  32702385 aataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 32702474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 17175906 - 17175817
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  17175906 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 17175817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 17705353 - 17705265
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||| | |||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  17705353 aataaatgagactgaaatctaagg-tgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 17705265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 33695211 - 33695122
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| ||| |||||||| ||||||||||   |||||||||||||||||||||||||||    
T  33695211 aataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttcttataaaatcattcttgatatctagcattttc 33695122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 33696877 - 33696966
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||| ||| ||||||   |||||||||||||||||||||||||||    
T  33696877 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 33696966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 63 - 165
Target Start/End: Original strand, 29693625 - 29693727
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttcacttaaaaa 161  Q
    |||||||||||||||||||||| | | |||||| || |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||| |||||| |    
T  29693625 aataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcattttc-cttaaata 29693723  T
Q  162 attt 165  Q
    ||||    
T  29693724 attt 29693727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 18365459 - 18365370
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| |||||||||||  |||||||||||| || ||||||   |||||||||||||||||||||||||||    
T  18365459 aataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18365370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 18370723 - 18370634
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| |||||||||||  |||||||||||| || ||||||   |||||||||||||||||||||||||||    
T  18370723 aataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18370634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 2309308 - 2309219
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||| | ||||||||||| |||||||||||||||| ||||||   |||||||  ||||||||||||||||||    
T  2309308 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatcgttgatatctagcattttc 2309219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 23290966 - 23290877
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| | ||||||||| ||| |||||||||||| ||||||   |||||||| ||||||||||||||||||    
T  23290966 aataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagcattttc 23290877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 34238947 - 34238883
Alignment:
Q  88 tgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttc 152  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  34238947 tgattattgtgtcatgtcattcttgaat-cttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 6031625 - 6031537
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 151  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||| ||| ||| ||   ||||||||||||||||| || |||||    
T  6031625 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttataaaatcattcttgatatccagtatttt 6031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 18889529 - 18889466
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgata 126  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||||||  |||||||||    
T  18889529 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcattcttgata 18889466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 18889685 - 18889757
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatt 149  Q
    |||||||| | | |||||| || |||||||||||||||  |||||||||||||| |||||||||| |||||||    
T  18889685 aaatctaagggttattattctgccatgtcattcttgaaattttcttgataaatctttcttgatatatagcatt 18889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 126
Target Start/End: Complemental strand, 29693516 - 29693478
Alignment:
Q  88 tgattattgtgtcatgtcattcttgaatatttcttgata 126  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  29693516 tgattattctgtcatgtcattcttgaatatttcttgata 29693478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 6127457 - 6127506
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttg 112  Q
    ||||||| |||||||||||||||  ||||||||||| |||||||||||||    
T  6127457 aataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 17176009 - 17176082
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| ||||||||||||||||||  ||| ||||| ||||| |||||||||| |||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcatt 17176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 17705453 - 17705526
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| ||||||||||||||| ||  ||||||||| ||||| |||||||||| |||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 17705526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 33695315 - 33695388
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 33696773 - 33696700
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 6127352 - 6127279
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||| ||  ||||||||| ||||| |||||||||| |||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 6127279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 23291072 - 23291145
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||| ||  ||||||||| ||||| |||||||||| |||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 23291145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 28675225 - 28675152
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | ||||||||  | |||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 28675152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 9752233 - 9752297
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatat 141  Q
    |||||||| | |||||||| || ||| |||||||||||| ||||||||||| |  ||||||||||    
T  9752233 aaatctaagggtgattattctgccatatcattcttgaatttttcttgataattttttcttgatat 9752297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 66; Significance: 2e-29; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 16164 - 16253
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  16164 aataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 16253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 26116 - 26205
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  26116 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 26205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatat 141  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatat 141  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatat 141  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 48029 - 48118
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  48029 aataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 48118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 47927 - 47854
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||||||||| ||||| |||||||||  |||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcatt 47854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 13022 - 13110
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 151  Q
    ||||||| |||||||||||||||| | |||||||||||||||||||||| ||| ||||||   ||||||||||||||||||||||||||    
T  13022 aataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 12919 - 12846
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttg-ataaatcattcttgatatctagcatt 149  Q
    |||||||| |||||||||| || |||||||||||||||  ||||||| | ||||| |||||||||| |||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 12846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 4576 - 4665
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| ||| |||||||| ||| ||||||   |||||||||||||||||||||||||||    
T  4576 aataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttc 4665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 11801 - 11890
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||| ||| ||||||   ||||||||||||||||||| |||||||    
T  11801 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttc 11890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 11698 - 11625
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| ||||||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 11625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 41190 - 41279
Alignment:
Q  63 aataaataagactgaaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttc 152  Q
    ||||||| |||||||||||||||| ||||||||||  ||| ||||||||| || ||||||   |||||||||||||||||||||||||||    
T  41190 aataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 41279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 41088 - 41015
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 149  Q
    |||||||| | |||||||| || |||||||||||||||  ||| ||||| ||||| |||||||||| |||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 41015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 85503 - 85451
Alignment:
Q  77 aaatctaaagatgattattgtgtcatgtcattcttgaatatttcttgataaat 129  Q
    |||| ||| |||||||||| || |||||||||||||| | |||||||||||||    
T  85503 aaatttaaggatgattattctgccatgtcattcttgagtttttcttgataaat 85451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University