View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10440_low_14 (Length: 240)
Name: NF10440_low_14
Description: NF10440
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10440_low_14 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 30876812 - 30877027
Alignment:
| Q |
18 |
ggattttagttgtggtgtatagataagttatatgtgttccctca-aaaaagaaaagat-aagttatatgtgttgtctccattaaataatgttcaaattac |
115 |
Q |
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| T |
30876812 |
ggattttagttgcggtgtatagataagttatatgtgttccctcagaaaaaaaaaagattaagttatatgtgttgtctccattaaataatgttcaaattac |
30876911 |
T |
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| Q |
116 |
attatcttttcattta-ttttaaaaacatagattctcctctcataggatattaatatttcttgtactttaagttatatacattaataacttttttgataa |
214 |
Q |
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| T |
30876912 |
attatcttttcatttatttttaaaaaca----------tgtcataggatattactatttcttgtactttaagttatatacattaataacttttttgataa |
30877001 |
T |
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| Q |
215 |
atttaaagtaatatatgatcacctct |
240 |
Q |
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| T |
30877002 |
atttaaagtaatatatgatcacctct |
30877027 |
T |
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