View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10440_low_17 (Length: 229)

Name: NF10440_low_17
Description: NF10440
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10440_low_17
NF10440_low_17
[»] chr4 (58 HSPs)
chr4 (10-229)||(42312865-42313084)
chr4 (146-229)||(33629694-33629777)
chr4 (146-202)||(7806582-7806638)
chr4 (149-229)||(33629956-33630035)
chr4 (146-222)||(45427238-45427314)
chr4 (148-222)||(51470525-51470599)
chr4 (149-222)||(29669352-29669425)
chr4 (149-222)||(52214657-52214730)
chr4 (149-222)||(53740224-53740297)
chr4 (146-222)||(990589-990665)
chr4 (149-229)||(27048126-27048206)
chr4 (146-222)||(27048394-27048470)
chr4 (146-222)||(51469523-51469599)
chr4 (146-222)||(53739908-53739984)
chr4 (154-224)||(43972395-43972465)
chr4 (157-222)||(21497680-21497745)
chr4 (157-222)||(21498229-21498294)
chr4 (149-222)||(23018512-23018585)
chr4 (146-222)||(12016877-12016953)
chr4 (146-222)||(29669664-29669740)
chr4 (154-222)||(45426930-45426998)
chr4 (147-222)||(5488409-5488484)
chr4 (149-220)||(50858056-50858127)
chr4 (148-222)||(12016671-12016745)
chr4 (148-222)||(25753593-25753667)
chr4 (148-222)||(43943715-43943789)
chr4 (148-222)||(56511546-56511620)
chr4 (149-222)||(15665195-15665268)
chr4 (149-222)||(22867126-22867199)
chr4 (146-227)||(28245825-28245906)
chr4 (149-218)||(28395223-28395292)
chr4 (149-222)||(29113491-29113564)
chr4 (146-219)||(34206241-34206314)
chr4 (149-222)||(36558455-36558528)
chr4 (157-222)||(41176748-41176813)
chr4 (146-218)||(27634312-27634384)
chr4 (146-202)||(27634517-27634573)
chr4 (149-202)||(35645219-35645274)
chr4 (149-202)||(35645508-35645563)
chr4 (158-222)||(49380878-49380942)
chr4 (148-222)||(50858370-50858441)
chr4 (154-222)||(56509651-56509719)
chr4 (146-222)||(56511339-56511415)
chr4 (146-185)||(20545898-20545937)
chr4 (155-202)||(27634091-27634138)
chr4 (149-216)||(29734609-29734676)
chr4 (159-222)||(35269053-35269116)
chr4 (159-229)||(7806394-7806464)
chr4 (149-219)||(34205982-34206052)
chr4 (149-222)||(13254425-13254498)
chr4 (149-202)||(17222656-17222709)
chr4 (161-222)||(52827233-52827294)
chr4 (146-222)||(6778662-6778738)
chr4 (149-229)||(17076929-17077009)
chr4 (146-202)||(21498593-21498649)
chr4 (162-222)||(33912085-33912145)
chr4 (146-202)||(35399402-35399458)
chr4 (148-192)||(51470716-51470760)
[»] chr1 (52 HSPs)
chr1 (16-114)||(47977596-47977694)
chr1 (148-229)||(49895188-49895269)
chr1 (146-229)||(24382346-24382429)
chr1 (149-229)||(1233961-1234041)
chr1 (146-220)||(20735566-20735640)
chr1 (154-228)||(22892427-22892501)
chr1 (149-222)||(43423321-43423394)
chr1 (158-222)||(11590629-11590693)
chr1 (163-222)||(11590462-11590521)
chr1 (148-222)||(17419829-17419903)
chr1 (149-199)||(24382140-24382190)
chr1 (149-222)||(4022114-4022187)
chr1 (149-218)||(15392150-15392219)
chr1 (149-222)||(31305753-31305826)
chr1 (154-218)||(15392071-15392135)
chr1 (146-222)||(29273211-29273287)
chr1 (154-229)||(22892682-22892757)
chr1 (148-222)||(2697319-2697393)
chr1 (148-222)||(20735797-20735871)
chr1 (146-200)||(24382554-24382608)
chr1 (148-222)||(39649072-39649146)
chr1 (157-222)||(463080-463145)
chr1 (149-218)||(2997045-2997114)
chr1 (149-222)||(8520082-8520155)
chr1 (157-222)||(11149420-11149485)
chr1 (154-199)||(17412597-17412642)
chr1 (149-222)||(19937032-19937105)
chr1 (146-203)||(24382762-24382819)
chr1 (149-222)||(33879767-33879840)
chr1 (149-222)||(33964415-33964488)
chr1 (149-202)||(34076664-34076717)
chr1 (149-222)||(45403482-45403555)
chr1 (146-202)||(2997247-2997303)
chr1 (146-222)||(19481378-19481454)
chr1 (146-202)||(29273052-29273108)
chr1 (162-222)||(38474325-38474385)
chr1 (149-229)||(41812647-41812727)
chr1 (155-222)||(12233325-12233392)
chr1 (154-221)||(35024454-35024521)
chr1 (146-192)||(9380972-9381018)
chr1 (154-224)||(27957803-27957873)
chr1 (146-192)||(46098549-46098595)
chr1 (161-222)||(2104261-2104322)
chr1 (149-222)||(21638255-21638328)
chr1 (161-222)||(36332154-36332215)
chr1 (149-222)||(37600914-37600987)
chr1 (149-222)||(43361541-43361614)
chr1 (149-218)||(52846838-52846907)
chr1 (146-202)||(9381161-9381217)
chr1 (146-218)||(15391865-15391937)
chr1 (154-222)||(35024241-35024309)
chr1 (154-222)||(40664252-40664320)
[»] chr3 (59 HSPs)
chr3 (14-114)||(51565156-51565256)
chr3 (149-229)||(42604943-42605023)
chr3 (146-222)||(44573681-44573757)
chr3 (149-222)||(44573978-44574051)
chr3 (146-218)||(22407634-22407706)
chr3 (146-222)||(50692365-50692441)
chr3 (149-224)||(21832188-21832263)
chr3 (146-220)||(4255554-4255628)
chr3 (153-222)||(13769284-13769353)
chr3 (149-222)||(21750517-21750590)
chr3 (149-218)||(22407430-22407499)
chr3 (149-222)||(34715444-34715517)
chr3 (149-222)||(50692568-50692641)
chr3 (146-218)||(9264279-9264351)
chr3 (146-218)||(9264486-9264558)
chr3 (154-222)||(31563997-31564065)
chr3 (146-222)||(38300738-38300814)
chr3 (146-222)||(39078757-39078833)
chr3 (146-222)||(39956660-39956736)
chr3 (146-218)||(51642621-51642693)
chr3 (146-229)||(40230625-40230708)
chr3 (146-221)||(50057072-50057147)
chr3 (148-218)||(9264074-9264144)
chr3 (158-224)||(49477367-49477433)
chr3 (157-222)||(3985815-3985880)
chr3 (147-216)||(24539202-24539271)
chr3 (149-222)||(38300272-38300345)
chr3 (149-218)||(42258956-42259025)
chr3 (149-222)||(45443322-45443395)
chr3 (149-222)||(50203846-50203919)
chr3 (149-218)||(51642417-51642486)
chr3 (157-221)||(10453700-10453764)
chr3 (158-222)||(34992619-34992683)
chr3 (146-222)||(44573368-44573444)
chr3 (158-222)||(49477576-49477640)
chr3 (154-229)||(35015520-35015595)
chr3 (159-222)||(54369081-54369144)
chr3 (146-192)||(4255991-4256037)
chr3 (146-220)||(14169985-14170059)
chr3 (149-222)||(22339783-22339856)
chr3 (149-222)||(27219371-27219444)
chr3 (146-222)||(33909818-33909895)
chr3 (157-222)||(34356839-34356904)
chr3 (149-222)||(35011906-35011979)
chr3 (149-222)||(43101360-43101433)
chr3 (146-203)||(46412224-46412281)
chr3 (149-202)||(51338392-51338445)
chr3 (154-222)||(4191116-4191184)
chr3 (162-222)||(10450650-10450710)
chr3 (162-222)||(10856628-10856688)
chr3 (146-222)||(19820514-19820590)
chr3 (154-222)||(31563693-31563761)
chr3 (146-218)||(37058757-37058829)
chr3 (146-222)||(37223617-37223693)
chr3 (149-229)||(40230424-40230503)
chr3 (148-192)||(48685300-48685344)
chr3 (146-186)||(50057237-50057277)
chr3 (146-186)||(50057367-50057407)
chr3 (154-222)||(53761392-53761460)
[»] chr7 (34 HSPs)
chr7 (146-229)||(258464-258547)
chr7 (149-229)||(6813067-6813147)
chr7 (158-229)||(6751707-6751778)
chr7 (146-229)||(6813269-6813352)
chr7 (154-228)||(40703405-40703479)
chr7 (160-229)||(6751505-6751574)
chr7 (146-222)||(13310411-13310487)
chr7 (149-222)||(7135232-7135305)
chr7 (158-222)||(29252618-29252682)
chr7 (147-202)||(40792799-40792854)
chr7 (149-227)||(5775919-5775997)
chr7 (149-222)||(1661180-1661253)
chr7 (149-222)||(6783080-6783153)
chr7 (149-222)||(28910074-28910147)
chr7 (154-222)||(257261-257329)
chr7 (154-222)||(43288574-43288642)
chr7 (148-215)||(1663592-1663659)
chr7 (154-229)||(40703646-40703721)
chr7 (158-229)||(43366239-43366310)
chr7 (159-222)||(43384279-43384342)
chr7 (156-222)||(39808460-39808526)
chr7 (156-222)||(39808593-39808659)
chr7 (153-222)||(36092385-36092454)
chr7 (146-202)||(23396671-23396727)
chr7 (162-222)||(36270699-36270759)
chr7 (146-222)||(43288306-43288382)
chr7 (147-222)||(31374807-31374882)
chr7 (154-229)||(40703853-40703928)
chr7 (149-203)||(41670894-41670948)
chr7 (149-222)||(12518159-12518232)
chr7 (165-222)||(37272050-37272107)
chr7 (149-222)||(40121607-40121680)
chr7 (153-222)||(48116289-48116358)
chr7 (154-222)||(29780189-29780257)
[»] chr8 (31 HSPs)
chr8 (154-229)||(5496596-5496671)
chr8 (148-222)||(18905898-18905972)
chr8 (147-229)||(30176451-30176533)
chr8 (148-222)||(36997208-36997282)
chr8 (149-222)||(20298505-20298578)
chr8 (149-222)||(21085137-21085210)
chr8 (149-222)||(32931443-32931516)
chr8 (146-222)||(3183897-3183973)
chr8 (146-222)||(10989227-10989303)
chr8 (154-222)||(34248401-34248469)
chr8 (146-222)||(43599353-43599429)
chr8 (146-222)||(43984302-43984378)
chr8 (155-222)||(34248119-34248186)
chr8 (154-229)||(36037225-36037300)
chr8 (148-222)||(10989022-10989096)
chr8 (155-224)||(21653844-21653913)
chr8 (146-222)||(15011015-15011091)
chr8 (149-229)||(36039783-36039863)
chr8 (148-218)||(16454623-16454693)
chr8 (149-222)||(40902382-40902455)
chr8 (146-218)||(8559627-8559699)
chr8 (148-220)||(15010809-15010881)
chr8 (146-222)||(21653369-21653445)
chr8 (149-229)||(22451383-22451463)
chr8 (149-217)||(36993936-36994004)
chr8 (158-222)||(42228813-42228877)
chr8 (147-222)||(20760647-20760722)
chr8 (154-219)||(23027822-23027887)
chr8 (154-194)||(7729741-7729781)
chr8 (154-202)||(7729968-7730016)
chr8 (146-222)||(22277566-22277642)
[»] chr5 (35 HSPs)
chr5 (146-222)||(13843739-13843815)
chr5 (149-222)||(1028082-1028155)
chr5 (146-222)||(2908755-2908831)
chr5 (146-222)||(13413626-13413702)
chr5 (146-222)||(20720536-20720612)
chr5 (146-224)||(48297-48375)
chr5 (148-222)||(12965234-12965308)
chr5 (152-222)||(37995626-37995696)
chr5 (165-222)||(15510509-15510566)
chr5 (149-222)||(24994111-24994184)
chr5 (146-222)||(3762948-3763024)
chr5 (154-222)||(24918203-24918271)
chr5 (146-222)||(34457138-34457214)
chr5 (154-222)||(38663289-38663357)
chr5 (147-222)||(28156072-28156147)
chr5 (155-222)||(35526983-35527050)
chr5 (148-194)||(18107697-18107743)
chr5 (148-222)||(20720343-20720417)
chr5 (148-222)||(38131806-38131880)
chr5 (161-229)||(1892091-1892159)
chr5 (146-218)||(24125108-24125180)
chr5 (154-222)||(28358029-28358097)
chr5 (154-222)||(29432454-29432522)
chr5 (146-222)||(38376773-38376849)
chr5 (146-218)||(40169027-40169099)
chr5 (154-202)||(43490210-43490258)
chr5 (155-222)||(48099-48166)
chr5 (151-202)||(30758305-30758356)
chr5 (155-222)||(35527269-35527336)
chr5 (160-222)||(18541764-18541826)
chr5 (149-222)||(873685-873758)
chr5 (164-229)||(17129993-17130058)
chr5 (149-222)||(34457345-34457418)
chr5 (158-222)||(2716588-2716652)
chr5 (154-222)||(2908556-2908624)
[»] chr2 (35 HSPs)
chr2 (146-222)||(21214187-21214263)
chr2 (149-222)||(42768323-42768396)
chr2 (149-222)||(43195826-43195899)
chr2 (146-222)||(3976457-3976533)
chr2 (149-222)||(23054368-23054441)
chr2 (146-202)||(93448-93504)
chr2 (146-202)||(93721-93777)
chr2 (146-222)||(3976989-3977065)
chr2 (154-222)||(11969094-11969162)
chr2 (151-222)||(17727446-17727517)
chr2 (149-222)||(883590-883663)
chr2 (153-222)||(10849484-10849553)
chr2 (149-222)||(20998978-20999051)
chr2 (149-222)||(25441738-25441811)
chr2 (157-222)||(30156250-30156315)
chr2 (157-222)||(30160369-30160434)
chr2 (149-222)||(31761373-31761446)
chr2 (149-218)||(33985760-33985829)
chr2 (146-222)||(883892-883968)
chr2 (154-222)||(901965-902033)
chr2 (158-202)||(6148920-6148964)
chr2 (146-222)||(12431940-12432016)
chr2 (146-202)||(37812499-37812555)
chr2 (158-222)||(38760315-38760379)
chr2 (154-222)||(39596700-39596768)
chr2 (149-220)||(34775401-34775472)
chr2 (152-222)||(7877886-7877956)
chr2 (149-219)||(25441892-25441962)
chr2 (149-222)||(6183355-6183428)
chr2 (157-222)||(25286257-25286322)
chr2 (149-222)||(32667225-32667298)
chr2 (146-222)||(3435472-3435548)
chr2 (154-222)||(10429781-10429849)
chr2 (146-174)||(29695531-29695559)
chr2 (156-192)||(32667049-32667085)
[»] chr6 (29 HSPs)
chr6 (146-229)||(11316878-11316961)
chr6 (146-229)||(30526873-30526956)
chr6 (155-229)||(10418333-10418407)
chr6 (149-222)||(1744831-1744904)
chr6 (149-229)||(15102613-15102694)
chr6 (154-222)||(8144059-8144127)
chr6 (146-222)||(16876996-16877072)
chr6 (146-220)||(16590228-16590302)
chr6 (146-220)||(16605078-16605152)
chr6 (149-222)||(16876819-16876892)
chr6 (149-222)||(24055098-24055171)
chr6 (149-222)||(28149835-28149908)
chr6 (154-222)||(10733432-10733500)
chr6 (149-229)||(11317083-11317162)
chr6 (146-222)||(17147891-17147967)
chr6 (154-218)||(24558629-24558693)
chr6 (154-222)||(27914320-27914388)
chr6 (148-222)||(15101099-15101173)
chr6 (149-222)||(19054535-19054608)
chr6 (149-222)||(19712393-19712466)
chr6 (149-222)||(21067046-21067119)
chr6 (149-222)||(21088837-21088910)
chr6 (146-218)||(11313368-11313440)
chr6 (146-222)||(19712595-19712671)
chr6 (147-229)||(15102741-15102821)
chr6 (149-222)||(12134472-12134545)
chr6 (149-222)||(17096687-17096760)
chr6 (149-222)||(24558830-24558903)
chr6 (146-222)||(26098384-26098460)
[»] scaffold0434 (2 HSPs)
scaffold0434 (146-222)||(13348-13424)
scaffold0434 (149-222)||(13555-13628)
[»] scaffold0989 (1 HSPs)
scaffold0989 (149-222)||(2936-3009)
[»] scaffold0029 (1 HSPs)
scaffold0029 (155-222)||(76894-76961)
[»] scaffold1138 (1 HSPs)
scaffold1138 (147-222)||(2066-2141)


Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 10 - 229
Target Start/End: Complemental strand, 42313084 - 42312865
Alignment:
Q  10 acaattgcacggatgcttgaattttgtcagccggaatgtctcatccgccgaaatcatatcggtgactggggcactcaggtagatttaatctctaaagtaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42313084 acaattgcacggatgcttgaattttgtcagccggaatgtctcatccgccgaaatcatatcggtgactggggcactcaggtagatttaatctctaaagtaa 42312985  T
Q  110 actatccttttagggttaagataatgctggatccacccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||    
T  42312984 actatccttttagggttaagataatgctggatccacccatgttaaaatttggggcctaacccatcatcacaaaatcggcttgtgaagtgaggggttcctc 42312885  T
Q  210 ctctttataaactttcatca 229  Q
    ||||||||||||||||||||    
T  42312884 ctctttataaactttcatca 42312865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 33629777 - 33629694
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||| ||||||||  |||||| |||||||||| ||||||    
T  33629777 ccatgttgaaatttggggcctaactcatcgtcacaaaaccggcttgtgatgtgaggagtacctcctatttataaactctcatca 33629694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 7806582 - 7806638
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  7806582 ccatgttaaaagttggggcctaactcatcatcacaaaaccggcttgtgaggtgagga 7806638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 33630035 - 33629956
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||| ||||||||||||||||||||||||||||| | ||||||||| ||||||||  |||||| |||||||||| ||||||    
T  33630035 tgttgaaatttggggcctaactcatcatcacaaact-ggcttgtgatgtgaggagtgcctcctatttataaactctcatca 33629956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 45427238 - 45427314
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  45427238 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 45427314  T

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Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 51470599 - 51470525
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||| ||||||| |||||||||    
T  51470599 atgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagagcctcctccttataaact 51470525  T

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Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 29669352 - 29669425
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  29669352 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 29669425  T

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Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 52214730 - 52214657
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  52214730 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 52214657  T

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Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 53740297 - 53740224
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  53740297 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 53740224  T

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Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 990665 - 990589
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| || ||||| | ||||||||  |||||||||||||||||    
T  990665 ccatgttgaaatttggggcctaactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaact 990589  T

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Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 27048126 - 27048206
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||| ||||||||||||||||||||| | |||||| |||||||  | ||||||||  ||||||||||||||||||| ||||    
T  27048126 tgttgaaatttggggcctaactcatccttacaaaaccggcttgcaaggtgaggagtgcctcctctttataaacttttatca 27048206  T

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Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 27048394 - 27048470
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||| ||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  27048394 ccatgttgaaatttgggacctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 27048470  T

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Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 51469599 - 51469523
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | ||| || |||||||| | ||||||||  |||||||||||||||||    
T  51469599 ccatgttgaaatttggggcctaactcatccttacacaaccggcttgtaaggtgaggagtgcctcctctttataaact 51469523  T

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Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 53739984 - 53739908
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||| ||||| | |||||| |||||||| |  ||||||| ||||||||||||||||||    
T  53739984 ccatgttgaaatttggggcctaaatcatccttacaaaaccggcttgtaagctgaggagttcctcctctttataaact 53739908  T

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Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 43972465 - 43972395
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaacttt 224  Q
    ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||| ||||||    
T  43972465 aaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatcaacttt 43972395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 21497680 - 21497745
Alignment:
Q  157 tttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  21497680 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 21497745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 21498294 - 21498229
Alignment:
Q  157 tttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  21498294 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 21498229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 23018585 - 23018512
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  23018585 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaact 23018512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 12016877 - 12016953
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||| ||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  12016877 ccatgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 12016953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 29669664 - 29669740
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||  ||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  29669664 ccatgttgaaatttggggtttaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 29669740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 45426930 - 45426998
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||||| | |||||| || ||||| | ||||||||  |||||||||||||||||    
T  45426930 aaatttggggcctaactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaact 45426998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 5488484 - 5488409
Alignment:
Q  147 catgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||| ||||||| ||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  5488484 catgttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 5488409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 50858127 - 50858056
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaa 220  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||| ||||||||||    
T  50858127 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtacctcttctttataaa 50858056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 12016671 - 12016745
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||| ||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  12016671 atgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 12016745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 25753593 - 25753667
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||||||| ||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  25753593 atgttgaaatttgggacctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 25753667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 43943789 - 43943715
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||| ||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  43943789 atgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 43943715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 56511620 - 56511546
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||||||||||||||||||| | |||||||||| |  | | ||||||||  |||||||||||||||||    
T  56511620 atgttgaaatttggggcctaactcatccttacaaaatcggttcataaggtgaggagtgcctcctctttataaact 56511546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 15665268 - 15665195
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||| ||||||||||||| | |||||| |||||||| | ||||||||  |||||||| ||||||||    
T  15665268 tgttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctatataaact 15665195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 22867199 - 22867126
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| |||||||||||||||| || |  ||||||| |||||||| | ||||||||  |||||||||||||||||    
T  22867199 tgttgaaatttggggcctaacacaaccccacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 22867126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 28245906 - 28245825
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcat 227  Q
    ||||||| ||||| ||||||||||||||| | |||||| |||||||  | |||||||   ||||||||||||||||| ||||    
T  28245906 ccatgttgaaattgggggcctaactcatccttacaaaaccggcttgcaaggtgaggattgcctcctctttataaactctcat 28245825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 28395292 - 28395223
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||    
T  28395292 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 28395223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 29113564 - 29113491
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| | |||||| | |||||||   |||||||||||||||||    
T  29113564 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaact 29113491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 34206241 - 34206314
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataa 219  Q
    ||||||| | ||||||||||||||||||| | || ||| |||||||| | ||||||||  ||||||||||||||    
T  34206241 ccatgttgagatttggggcctaactcatccttacgaaaccggcttgtaaggtgaggagtgcctcctctttataa 34206314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 36558455 - 36558528
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  | | |||||||||||||    
T  36558455 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttactctttataaact 36558528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 41176813 - 41176748
Alignment:
Q  157 tttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||| | |||||| |||||||| | ||||||||  | |||||||||||||||    
T  41176813 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaact 41176748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 27634312 - 27634384
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    |||||||  |||||||||||||||||||| | ||||||||||||||| | ||||| |   |||||||||||||    
T  27634312 ccatgttgtaatttggggcctaactcatccttacaaaatcggcttgtaaggtgagaattgcctcctctttata 27634384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 27634517 - 27634573
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    |||||||  |||||||||||||||||||| | |||||| |||||||||| |||||||    
T  27634517 ccatgttgtaatttggggcctaactcatcgttacaaaaccggcttgtgaggtgagga 27634573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 35645219 - 35645274
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcg--gcttgtgaagtgagga 202  Q
    |||| |||||||||||||||||||||||||||||| ||  |||||||| |||||||    
T  35645219 tgttgaaatttggggcctaactcatcatcacaaaaccggcgcttgtgaggtgagga 35645274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 35645508 - 35645563
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcg--gcttgtgaagtgagga 202  Q
    |||| |||||||||||||||||||||||||||||| ||  |||||||| |||||||    
T  35645508 tgttgaaatttggggcctaactcatcatcacaaaaacggcgcttgtgaggtgagga 35645563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 49380878 - 49380942
Alignment:
Q  158 ttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| |||||||| |||||||||||| |||||||| | |||||||   |||||||||||||||||    
T  49380878 ttggagcctaacttatcatcacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 49380942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 50858441 - 50858370
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||||||||||||||||||| | |||||| |||||||| |   ||||||  |||||||||||||||||    
T  50858441 atgttgaaatttggggcctaactcatccttacaaaaccggcttgtaa---gaggagtgcctcctctttataaact 50858370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 56509719 - 56509651
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||||||   |||||| |||||||| |  |||||||  |||||||||||||||||    
T  56509719 aaatttggggcctaactcatccgtacaaaaccggcttgtaagttgaggagtgcctcctctttataaact 56509651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 56511415 - 56511339
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| ||| |  | | ||||||||  |||||||||||||||||    
T  56511415 ccatgttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaact 56511339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 20545898 - 20545937
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatc 185  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  20545898 ccatgttgaaatttggggcctaactcatcattacaaaatc 20545937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 27634091 - 27634138
Alignment:
Q  155 aatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    |||||||||||||||||||| | |||||||||| |||||| |||||||    
T  27634091 aatttggggcctaactcatccttacaaaatcggtttgtgaggtgagga 27634138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 29734676 - 29734609
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctcttta 216  Q
    |||| |||||||||||| |||||||| | |||||| |||||||| | ||||||||  |||||||||||    
T  29734676 tgttgaaatttggggcccaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcttta 29734609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 35269116 - 35269053
Alignment:
Q  159 tggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||| | |||||||| |||||| | ||||||||  | |||||||||||||||    
T  35269116 tggggcctaactcatccttacaaaatcagcttgtaaggtgaggagtgcttcctctttataaact 35269053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 7806394 - 7806464
Alignment:
Q  159 tggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||||||||| |||| ||||||||| |||||||| | ||||||||   ||||||||||||| || ||||||    
T  7806394 tggggcctaattcataatcacaaaaccggcttgtaaggtgaggagtgtctcctctttataagctatcatca 7806464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 34205982 - 34206052
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataa 219  Q
    |||| ||||||||| ||||||||||| | |||||| | |||||| | ||||||||  ||||||||||||||    
T  34205982 tgttgaaatttgggacctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataa 34206052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 13254498 - 13254425
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||  | |||||| ||| |||| | ||||||||  |||| ||||||||||||    
T  13254498 tgttgaaatttggggcctaactcatgcttacaaaaccgggttgtaaggtgaggagtgcctcatctttataaact 13254425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 17222656 - 17222709
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    |||| |||||||||||||||| |||| | |||||| |||||||||| |||||||    
T  17222656 tgttgaaatttggggcctaacacatccttacaaaaccggcttgtgaggtgagga 17222709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 52827233 - 52827294
Alignment:
Q  161 gggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||| ||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  52827233 gggcctgactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 52827294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 6778662 - 6778738
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||| || |||||||| | | |||||| |||||||||| |||||||    ||||||||||||||||    
T  6778662 ccatgttgaaatttgaggtctaactcaaccttacaaaaccggcttgtgaggtgaggattgtctcctctttataaact 6778738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 17076929 - 17077009
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||| ||||||||||||||||||| | | |||||| |||||||  ||||||||    |||||||||||| |||| ||||||    
T  17076929 tgttgaaatttggggcctaactcaaccttacaaaaccggcttgcaaagtgagggttgcctcctctttatgaactctcatca 17077009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 21498649 - 21498593
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    |||||||  |||||||||||||||||||| | |||||| |||||||| | |||||||    
T  21498649 ccatgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagga 21498593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 33912145 - 33912085
Alignment:
Q  162 ggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||| | |||||| |||||| |  |||||||||  |||||||||||||||||    
T  33912145 ggcctaactcatccttacaaaaccggcttatacagtgaggagtgcctcctctttataaact 33912085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 35399402 - 35399458
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    ||||||| ||||||||||||||||||| | | |||||| |||||||| | |||||||    
T  35399402 ccatgttgaaatttggggcctaactcaaccttacaaaaccggcttgtaaggtgagga 35399458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 51470760 - 51470716
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgt 192  Q
    ||||| ||||||||||||||||||||| | |||||| ||||||||    
T  51470760 atgttgaaatttggggcctaactcatccttacaaaaccggcttgt 51470716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 47977694 - 47977596
Alignment:
Q  16 gcacggatgcttgaattttgtcagccggaatgtctcatccgccgaaatcatatcggtgactggggcactcaggtagatttaatctctaaagtaaactat 114  Q
    ||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  47977694 gcacgaatgcttgaattttgccagcctgaatgtctgatccgccgaaatcatatcggtgactggggtactcaggtagatttaatctctgaagtaaactat 47977596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 49895269 - 49895188
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    ||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||  | ||||| ||||||| ||||||||    
T  49895269 atgttgaaatttggggcttaactcatcatcacaaaaccggcttgtgaagtgaggagtgcatcctccttataaattttcatca 49895188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 24382346 - 24382429
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    ||||||| ||||||||||||||| |||||||||||||| || |||||||  |||||||  ||||||||||||||||| ||||||    
T  24382346 ccatgttgaaatttggggcctaattcatcatcacaaaaccgacttgtgagatgaggagtgcctcctctttataaactctcatca 24382429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 1234041 - 1233961
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||| |||||||||| ||||||||||||||||||| | |||||||| ||||||||   |||||||||||||||| ||||||    
T  1234041 tgttgaaatttggggtctaactcatcatcacaaaaccagcttgtgaggtgaggagtgtctcctctttataaactctcatca 1233961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 20735640 - 20735566
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaa 220  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||    
T  20735640 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaa 20735566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 22892427 - 22892501
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatc 228  Q
    ||||||||||||||||||||| | |||||| ||| |||||| ||||||||  ||||||||||||||||| |||||    
T  22892427 aaatttggggcctaactcatccttacaaaaccggattgtgaggtgaggagtgcctcctctttataaactctcatc 22892501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 43423394 - 43423321
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||||||||||| | ||||||  ||||||| | ||||||||  |||||||||||||||||    
T  43423394 tgttaaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaact 43423321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 11590693 - 11590629
Alignment:
Q  158 ttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| |||||||||| |||||||   |||||||||||||||||    
T  11590693 ttggagcctaactcatcatcacaaaaccggcttgtgaggtgaggattgcctcctctttataaact 11590629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 11590521 - 11590462
Alignment:
Q  163 gcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||||| |||||||||| |||||||   |||||||||||||||||    
T  11590521 gcctaactcatcatcacaaaaccggcttgtgaggtgaggattgcctcctctttataaact 11590462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 17419903 - 17419829
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| |||||||||| |||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  17419903 atgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 17419829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 24382140 - 24382190
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtga 199  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||| ||||    
T  24382140 tgttaaaatttggagcctaactcatcatcacaaaaccggcttgtgaggtga 24382190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 4022114 - 4022187
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | ||||||  ||||||| | ||||||||  |||||||||||||||||    
T  4022114 tgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaact 4022187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 15392219 - 15392150
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    |||| ||||||||||||||||||||| | ||||||||||||||| | |||||||   |||||||||||||    
T  15392219 tgttgaaatttggggcctaactcatccttacaaaatcggcttgtaaggtgaggattgcctcctctttata 15392150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 31305826 - 31305753
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| |||||||| |||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  31305826 tgttgaaatttggagcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 31305753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 15392135 - 15392071
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    ||||||||||||||||||||| | |||||| |||||||| |||||||||   |||||||||||||    
T  15392135 aaatttggggcctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttata 15392071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 29273211 - 29273287
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   ||||| |||||||||||    
T  29273211 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcccctttataaact 29273287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 22892682 - 22892757
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    ||||||||||||||||||||| | |||||| |||||||||| | ||||||   |||||||||||||| | ||||||    
T  22892682 aaatttggggcctaactcatccttacaaaaccggcttgtgaggcgaggagtgtctcctctttataaagtctcatca 22892757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 2697319 - 2697393
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| |||||||||| ||||||| || | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  2697319 atgttgaaatttggggtctaactcgtccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 2697393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 20735871 - 20735797
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||||| ||| ||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  20735871 atgttgaaatttgaggcttaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 20735797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 24382554 - 24382608
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgag 200  Q
    ||||||| |||||| |||||||||| |||||||||||| |||||||||| |||||    
T  24382554 ccatgttcaaatttcgggcctaacttatcatcacaaaaccggcttgtgaggtgag 24382608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 39649072 - 39649146
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||||||||| ||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  39649072 atgttgaaatttggggcataactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 39649146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 463080 - 463145
Alignment:
Q  157 tttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||| | |||||| |||||||| | ||||||||  | |||||||||||||||    
T  463080 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaact 463145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 2997045 - 2997114
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    |||| ||||||||||||||||||||| | |||||| |||||||||| ||||| |   |||||||||||||    
T  2997045 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtgaggtgagtattacctcctctttata 2997114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 8520082 - 8520155
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| |||||||||| |||||||||| | |||||| |||||||| | ||||||||  |||| ||||||||||||    
T  8520082 tgttgaaatttggggtctaactcatctttacaaaaccggcttgtaaggtgaggagtgcctcttctttataaact 8520155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 11149420 - 11149485
Alignment:
Q  157 tttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||| | |||||| |||||||| | ||||||||  | |||||||||||||||    
T  11149420 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaact 11149485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 17412642 - 17412597
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtga 199  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||    
T  17412642 aaatttggggtctaattcatcgtcacaaaatcggcttgtgaagtga 17412597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 19937032 - 19937105
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||| || |||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  19937032 tgttgaaattcggtgcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 19937105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 24382762 - 24382819
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggag 203  Q
    ||||||| |||||||||||| |||||||| ||||||||  |||| |||||||||||||    
T  24382762 ccatgttgaaatttggggccaaactcatcctcacaaaactggctggtgaagtgaggag 24382819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 33879767 - 33879840
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| | |||||| | ||||||||   ||||||||||||||||    
T  33879767 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaact 33879840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 33964488 - 33964415
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| | |||||| | ||||||||   ||||||||||||||||    
T  33964488 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaact 33964415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 34076717 - 34076664
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    |||| ||||||||||||||||||||| | | |||||||| ||||||||||||||    
T  34076717 tgttgaaatttggggcctaactcatccttataaaatcggtttgtgaagtgagga 34076664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 45403555 - 45403482
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||| ||||||||||||| | |||||| | |||||| | ||||||||  |||||||||||||||||    
T  45403555 tgttgaaatttgaggcctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaact 45403482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 2997247 - 2997303
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||| ||| |||||||    
T  2997247 ccatgttgaaatttggggcctaactcatctttacaaaaccggcttatgaggtgagga 2997303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 19481378 - 19481454
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | ||  ||||  ||| |||||||||||||    
T  19481378 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtttggagtgcctactctttataaact 19481454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 29273052 - 29273108
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||    
T  29273052 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagga 29273108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 38474385 - 38474325
Alignment:
Q  162 ggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  38474385 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 38474325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 41812647 - 41812727
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||| |||||| ||| |||||||||| |||||||| || ||||| ||||||| ||   |||||||||||||||| ||||||    
T  41812647 tgttgaaatttcgggtctaactcatcctcacaaaaccgacttgtaaagtgagaagtgtctcctctttataaactctcatca 41812727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 12233392 - 12233325
Alignment:
Q  155 aatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||| ||||||| | | |||| |||||||| | ||||||||  |||||||||||||||||    
T  12233392 aatttggggccttactcatccttataaaaccggcttgtaaggtgaggagtacctcctctttataaact 12233325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 35024454 - 35024521
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaac 221  Q
    |||||||||||||||| |||| | |||||| |||||||| | ||||||||  |||||| |||||||||    
T  35024454 aaatttggggcctaacccatccttacaaaaccggcttgtaaggtgaggagtgcctcctgtttataaac 35024521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 9381018 - 9380972
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgt 192  Q
    ||||||| ||||||||||||||||||||| | |||||| ||||||||    
T  9381018 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgt 9380972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 27957803 - 27957873
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaacttt 224  Q
    |||||||||| |||||||||| | |||||| ||||||||   ||||||||   ||||||||||||||||||    
T  27957803 aaatttggggtctaactcatccttacaaaaccggcttgtacggtgaggagcgtctcctctttataaacttt 27957873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 46098595 - 46098549
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgt 192  Q
    ||||||||||||||||||||||||||||| |  ||||| ||||||||    
T  46098595 ccatgttaaaatttggggcctaactcatccttgcaaaaccggcttgt 46098549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 2104261 - 2104322
Alignment:
Q  161 gggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||| | |||||| |||||||| | ||||||||  ||||||||||| |||||    
T  2104261 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttacaaact 2104322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 21638255 - 21638328
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |  ||||| | ||||||||   ||||||||||||||||    
T  21638255 tgttgaaatttggggcctaactcatccttacaaaaccatcttgtaaggtgaggagtgtctcctctttataaact 21638328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 36332215 - 36332154
Alignment:
Q  161 gggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||| | |||||| |||||||| | ||||||||  | |||||||||||||||    
T  36332215 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcatcctctttataaact 36332154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 37600987 - 37600914
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||| ||||||||| | |||||| |||||| | | ||||||||  || ||||||||||||||    
T  37600987 tgttgaaatttggggcttaactcatccttacaaaaccggcttataaggtgaggagtgccgcctctttataaact 37600914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 43361541 - 43361614
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||| |||| |||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  43361541 tgttgaaattgggggtctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 43361614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 52846838 - 52846907
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    |||| ||||||||||| ||||||||| | |||||| |||||||| | |||||||   |||||||||||||    
T  52846838 tgttgaaatttggggcttaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 52846907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 9381217 - 9381161
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    ||||||| ||||||||||||||||||||| | |||||  |||||||| | |||||||    
T  9381217 ccatgttgaaatttggggcctaactcatccttacaaagccggcttgtaaggtgagga 9381161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 15391937 - 15391865
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    ||||||| ||||||||||||| ||||||| | ||||||  ||||||| | |||||||   |||||||||||||    
T  15391937 ccatgttgaaatttggggccttactcatccttacaaaactggcttgtaaggtgaggattgcctcctctttata 15391865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 35024241 - 35024309
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||| |||| | |||||| |||| ||| | ||||||||  |||||| ||||||||||    
T  35024241 aaatttggggcctaacccatccttacaaaaccggcctgtaaggtgaggagtgcctcctgtttataaact 35024309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 40664320 - 40664252
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||| ||||| |||| | |||||| |||||||| | | ||||||  |||||||||||||||||    
T  40664320 aaatttggggtctaacacatccttacaaaaccggcttgtaaggcgaggagtgcctcctctttataaact 40664252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 51565156 - 51565256
Alignment:
Q  14 ttgcacggatgcttgaattttgtcagccggaatgtctcatccgccgaaatcatatcggtgactggggcactcaggtagatttaatctctaaagtaaacta 113  Q
    ||||||| |||||||||||||| ||||| |||||| | |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  51565156 ttgcacgaatgcttgaattttgccagcctgaatgtttgatccgcagaaatcatatcggtgactggggcactcaggttgatttaatctctaaagtatacta 51565255  T
Q  114 t 114  Q
    |    
T  51565256 t 51565256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 42605023 - 42604943
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||| ||||||| |||||||||||||||||||||||| | |||||||||||||||  || | ||||||||||||| |||||    
T  42605023 tgttgaaatttgaggcctaactcatcatcacaaaatcagtttgtgaagtgaggagtgccccttctttataaacttccatca 42604943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 44573757 - 44573681
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  44573757 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 44573681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 44574051 - 44573978
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  44574051 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 44573978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 22407634 - 22407706
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||    
T  22407634 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttata 22407706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 50692441 - 50692365
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  50692441 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 50692365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 21832188 - 21832263
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaacttt 224  Q
    |||| ||||||||||||||||||||| | |||||| |||||||||| |||||||   |||| ||||||||||||||    
T  21832188 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtgaggtgaggattgcctcatctttataaacttt 21832263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 4255628 - 4255554
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaa 220  Q
    ||||||| ||||||||||||||||||||| |  ||||| |||||||| ||||||||||  | |||||||||||||    
T  4255628 ccatgttgaaatttggggcctaactcatccttgcaaaaccggcttgtaaagtgaggagtgcatcctctttataaa 4255554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 13769284 - 13769353
Alignment:
Q  153 aaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||||||| | |||||| | |||||| | ||||||||  |||||||||||||||||    
T  13769284 aaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaact 13769353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 21750590 - 21750517
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | ||||||  ||||||| | ||||||||  |||||||||||||||||    
T  21750590 tgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaact 21750517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 22407430 - 22407499
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||    
T  22407430 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttata 22407499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 34715444 - 34715517
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||| ||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  34715444 tgttgaaatttggggcataactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 34715517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 50692641 - 50692568
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  50692641 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 50692568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 9264279 - 9264351
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||    
T  9264279 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 9264351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 9264486 - 9264558
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    |||||||  |||||||||||||||||||| | |||||| |||||||| |||||||||   |||||||||||||    
T  9264486 ccatgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttata 9264558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 31563997 - 31564065
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||| | | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  31563997 aaatttggggcctaactcaactttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 31564065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 38300738 - 38300814
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||| |||||||||||||   |||||| |||||||| | ||||||||  |||||||||||||||||    
T  38300738 ccatgttgaaatttgaggcctaactcatccgtacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 38300814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 39078757 - 39078833
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||  |||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  39078757 ccatgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 39078833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 39956660 - 39956736
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| |||||||| |||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  39956660 ccatgttgaaatttggagcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 39956736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 51642621 - 51642693
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||    
T  51642621 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 51642693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 40230625 - 40230708
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    ||||||| ||||||||||| ||||||| | | |||||| |||||||| | |||||||   ||||||||||||||||| ||||||    
T  40230625 ccatgttgaaatttggggcttaactcaaccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctcatca 40230708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 50057147 - 50057072
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaac 221  Q
    ||||||| ||||||||||||||||||||| | ||||||  ||||||| | |||||| |  ||||||||||||||||    
T  50057147 ccatgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggggtgcctcctctttataaac 50057072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 9264074 - 9264144
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    ||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||    
T  9264074 atgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 9264144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 49477433 - 49477367
Alignment:
Q  158 ttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaacttt 224  Q
    ||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||||    
T  49477433 ttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaacttt 49477367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 3985880 - 3985815
Alignment:
Q  157 tttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||| | |||||| |||||||| | ||||||||  | |||||||||||||||    
T  3985880 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaact 3985815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 24539271 - 24539202
Alignment:
Q  147 catgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctcttta 216  Q
    |||||| || |||||||||||||||||| | ||||||||||||||| | ||||||||   ||||||||||    
T  24539271 catgttgaagtttggggcctaactcatccttacaaaatcggcttgtaaggtgaggagtgtctcctcttta 24539202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 38300272 - 38300345
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||| ||||||||||| | |||||| |||||||| | ||| ||||  |||||||||||||||||    
T  38300272 tgttgaaatttgggacctaactcatccttacaaaaccggcttgtaaggtggggagtgcctcctctttataaact 38300345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 42259025 - 42258956
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    ||||||||||||| |||||||||||| |  |||||||||||||| | |||||||   |||||||||||||    
T  42259025 tgttaaaatttggagcctaactcatccttgcaaaatcggcttgtaaggtgaggattgcctcctctttata 42258956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 45443395 - 45443322
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | | |||| |||||||| | |||| |||  |||||||||||||||||    
T  45443395 tgttgaaatttggggcctaactcatccttaaaaaaccggcttgtaaggtgaagagtgcctcctctttataaact 45443322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 50203846 - 50203919
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| ||| || | | ||||||||  |||||||||||||||||    
T  50203846 tgttgaaatttggggcctaactcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaact 50203919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 51642417 - 51642486
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||    
T  51642417 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 51642486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 10453700 - 10453764
Alignment:
Q  157 tttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaac 221  Q
    ||||| |||||||||||| | |||||| |||||||| | ||||||||  ||||||||||||||||    
T  10453700 tttggagcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaac 10453764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 34992683 - 34992619
Alignment:
Q  158 ttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||  ||||||| ||||||||||  ||||||   |||||||||||||||||    
T  34992683 ttggggcctaactcatccgcacaaaaccggcttgtgagatgaggattgcctcctctttataaact 34992619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 44573444 - 44573368
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| |||| | |||||||||||||| | |||||| ||||||||   ||||||||  |||||||||||||||||    
T  44573444 ccatgttgaaatctagggcctaactcatccttacaaaaccggcttgtagggtgaggagtgcctcctctttataaact 44573368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 49477640 - 49477576
Alignment:
Q  158 ttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  49477640 ttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 49477576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 35015595 - 35015520
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||||||||||| |||||||  | |||||| |||||| | |||||||||   ||||||||||||||||||| ||||    
T  35015595 aaatttggggccaaactcatacttacaaaaccggcttataaagtgaggattgcctcctctttataaacttttatca 35015520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 54369144 - 54369081
Alignment:
Q  159 tggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||| | || ||| ||| |||| ||||||||||  |||||||||||||||||    
T  54369144 tggggcctaactcatccttacgaaaccggtttgtaaagtgaggagtgcctcctctttataaact 54369081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 4256037 - 4255991
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgt 192  Q
    ||||||| ||||||||||||||||||||| | |||||| ||||||||    
T  4256037 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgt 4255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 14169985 - 14170059
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaa 220  Q
    ||||||| ||| ||||||  ||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||    
T  14169985 ccatgttgaaaattgggggataactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaa 14170059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 22339856 - 22339783
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||| ||||||||||||||| | |||||| || ||||| | |||||||   |||||||||||||||||    
T  22339856 tgttgaaattgggggcctaactcatccttacaaaaccgacttgtaaggtgaggattgcctcctctttataaact 22339783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 27219444 - 27219371
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||| ||| | ||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  27219444 tgttgaaatttggggcataagttatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 27219371  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 33909818 - 33909895
Alignment:
Q  146 ccatgttaaaatttggg-gcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||| |||||||||||| | |||||| |||||||| | | ||||||  | |||||||||||||||    
T  33909818 ccatgttgaaatttgggagcctaactcatccttacaaaaccggcttgtaaggcgaggagtgcatcctctttataaact 33909895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 34356839 - 34356904
Alignment:
Q  157 tttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||| ||||||||| | |||||| |||||||| | ||||||||  | |||||||||||||||    
T  34356839 tttggggcataactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaact 34356904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 35011979 - 35011906
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| ||| |  | | ||||||||  |||||||||||||||||    
T  35011979 tgttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaact 35011906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 43101360 - 43101433
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| |||||||||||| |||||||| | |||||| ||  |||| | ||||||||  |||||||||||||||||    
T  43101360 tgttgaaatttggggccaaactcatccttacaaaaccgatttgtaaggtgaggagtgcctcctctttataaact 43101433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 46412224 - 46412281
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggag 203  Q
    |||||||||||||||  | |||||||||||||||||||  | ||| ||||||||||||    
T  46412224 ccatgttaaaatttgaagtctaactcatcatcacaaaactgacttatgaagtgaggag 46412281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 51338392 - 51338445
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | |||||||    
T  51338392 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagga 51338445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 4191116 - 4191184
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||||| | |||||| |||||||| | || ||||    ||||||||||||||||    
T  4191116 aaatttggggcctaactcatccttacaaaaccggcttgtaaggtcaggattgtctcctctttataaact 4191184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 10450650 - 10450710
Alignment:
Q  162 ggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||  ||||||| ||||||||   ||||||||  |||||||||||||||||    
T  10450650 ggcctaactcatccccacaaaaccggcttgtacggtgaggagtgcctcctctttataaact 10450710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 10856628 - 10856688
Alignment:
Q  162 ggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||| | |||||| ||||||||  ||| |||||  |||||||||||||||||    
T  10856628 ggcctaactcatccttacaaaaccggcttgtatagtaaggagtgcctcctctttataaact 10856688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 19820514 - 19820590
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||| ||||||||||||| | |||||| ||| |||| | |||||||    ||||||||||||||||    
T  19820514 ccatgttgaaatttgaggcctaactcatccttacaaaaccggtttgtaaggtgaggattgtctcctctttataaact 19820590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 31563693 - 31563761
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||| |||||||| | | |||||| |||||| | | ||||||||  |||||||||||||||||    
T  31563693 aaatttgggggctaactcaaccttacaaaaccggcttctaaggtgaggagtgcctcctctttataaact 31563761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 37058757 - 37058829
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    ||||||| |||||| |||||||||||||| | |||||| ||| |||| | |||||||   |||||||||||||    
T  37058757 ccatgttgaaattttgggcctaactcatccttacaaaaccggtttgtaaggtgaggattacctcctctttata 37058829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 37223693 - 37223617
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| |||||||| ||||||||| || | |||||| |||||||| | |||| ||   |||||||||||||||||    
T  37223693 ccatgttgaaatttggagcctaactcttccttacaaaaccggcttgtaaggtgatgattgcctcctctttataaact 37223617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 40230424 - 40230503
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||| ||||||||||||||||||| | | |||||| ||||| || | |||||||  | |||||||||||||||| ||||||    
T  40230424 tgttgaaatttggggcctaactcaaccttacaaaaccggctcgtaaggtgagga-ttgctcctctttataaactctcatca 40230503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 48685300 - 48685344
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgt 192  Q
    ||||| ||||||||||||||||||||| | |||||| ||||||||    
T  48685300 atgttgaaatttggggcctaactcatccttacaaaaccggcttgt 48685344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 50057277 - 50057237
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcg 186  Q
    ||||||| ||||||||||||||||||||| | |||||||||    
T  50057277 ccatgttgaaatttggggcctaactcatccttacaaaatcg 50057237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 50057407 - 50057367
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcg 186  Q
    ||||||| ||||||||||||||||||||| | |||||||||    
T  50057407 ccatgttgaaatttggggcctaactcatccttacaaaatcg 50057367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 53761392 - 53761460
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||| | | |||||| |||||  | | ||||||||  |||||||||||||||||    
T  53761392 aaatttggggcctaactcaaccttacaaaaccggctcattaggtgaggagtgcctcctctttataaact 53761460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 258547 - 258464
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    ||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||  ||||||||| || |||| ||||||    
T  258547 ccatgttgaaatttggggcctaactcatcatcacaaaaccagcttgtgaagtgaggagtgcctcctcttcatcaactctcatca 258464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 6813067 - 6813147
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||  |||||||  ||||||||||||||||| ||||||    
T  6813067 tgttgaaatttggggcctaactcatcctcacaaaaccggcttgtgagttgaggagtgcctcctctttataaactctcatca 6813147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 6751707 - 6751778
Alignment:
Q  158 ttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||  |||||||||| |||||| ||||||    
T  6751707 ttggggcctaactcatcatcacaaaaccggcttgtgaggtgaggagtgcctcctctttgtaaactctcatca 6751778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 6813269 - 6813352
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    ||||||| |||||||||||||||||  || |||||||| |||||||||| ||||||||  ||||||||||||||||| ||||||    
T  6813269 ccatgttgaaatttggggcctaacttgtcctcacaaaaccggcttgtgaggtgaggagtgcctcctctttataaactctcatca 6813352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 40703405 - 40703479
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatc 228  Q
    ||||||||||||||||||||| | |||||| |||||||||| ||||||||  ||||||||||||||||| |||||    
T  40703405 aaatttggggcctaactcatccttacaaaaccggcttgtgaggtgaggagtgcctcctctttataaactctcatc 40703479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 6751505 - 6751574
Alignment:
Q  160 ggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||||||||||||||||||||||| |||||||||| ||||||||  |||||||||| |||||| ||||||    
T  6751505 ggggcctaactcatcatcacaaaaccggcttgtgaggtgaggagtgcctcctctttgtaaactctcatca 6751574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 13310411 - 13310487
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| ||| |||||||||||||||   ||||||||||||||||    
T  13310411 ccatgttgaaatttggggcctaactcatccttacaaaaccggtttgtgaagtgaggagtgtctcctctttataaact 13310487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 7135232 - 7135305
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| |||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  7135232 tgttagaatttggggcctaactcatctttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 7135305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 29252682 - 29252618
Alignment:
Q  158 ttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||||||||||| |||||||| | |||||||   |||||||||||||||||    
T  29252682 ttggggcctaactcatcatcacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 29252618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 40792799 - 40792854
Alignment:
Q  147 catgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    ||||||||||||||||| |||||||||| | ||||||||||||||||| |||||||    
T  40792799 catgttaaaatttggggtctaactcatccttacaaaatcggcttgtgaggtgagga 40792854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 5775997 - 5775919
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcat 227  Q
    |||| |||||| |||| ||||||||||||||||||   |||||| ||||||||||  ||||||||||||||||| ||||    
T  5775997 tgttgaaatttagggcttaactcatcatcacaaaactagcttgtaaagtgaggagtgcctcctctttataaactctcat 5775919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 1661180 - 1661253
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||  | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  1661180 tgttgaaatttggggcctaactcattcttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 1661253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 6783153 - 6783080
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  6783153 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 6783080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 28910147 - 28910074
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| |||||||||| |||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  28910147 tgttgaaatttgggggctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 28910074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 257261 - 257329
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||||| | |||||| ||||| || | ||||||||  |||||||||||||||||    
T  257261 aaatttggggcctaactcatccttacaaaaccggctagtaaggtgaggagtgcctcctctttataaact 257329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 43288642 - 43288574
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||| ||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  43288642 aaatttggggcctaactaatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 43288574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 215
Target Start/End: Original strand, 1663592 - 1663659
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctcttt 215  Q
    ||||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  ||||||||||    
T  1663592 atgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcttt 1663659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 40703646 - 40703721
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    ||||| ||||||||||||||| | |||||| |||||||||| ||||||||   |||||||||||||| | ||||||    
T  40703646 aaattaggggcctaactcatccttacaaaaccggcttgtgaggtgaggagtgtctcctctttataaagtctcatca 40703721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 43366310 - 43366239
Alignment:
Q  158 ttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||||| |||||||||||||||||||   ||||||||||||| |||  ||| ||||||||||||| ||||||    
T  43366310 ttggggtctaactcatcatcacaaaacaagcttgtgaagtgaagagtgcctactctttataaactctcatca 43366239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 43384279 - 43384342
Alignment:
Q  159 tggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  43384279 tggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 43384342  T

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Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 39808460 - 39808526
Alignment:
Q  156 atttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||| |||||||| |||||| | | |||||||   |||||||||||||||||    
T  39808460 atttggggcctaactcatcctcacaaaaccggcttttaaggtgaggattgcctcctctttataaact 39808526  T

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Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 39808593 - 39808659
Alignment:
Q  156 atttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||| ||||||||  ||||||| | |||||||   |||||||||||||||||    
T  39808593 atttggggcctaactcatcctcacaaaactggcttgtaaggtgaggattgcctcctctttataaact 39808659  T

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Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 36092385 - 36092454
Alignment:
Q  153 aaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||| ||||||||||||||| | |||||| |||||||| | ||||||||  |||||||| ||||||||    
T  36092385 aaaattcggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtacctcctctctataaact 36092454  T

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Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 23396727 - 23396671
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||    
T  23396727 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagga 23396671  T

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Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 36270699 - 36270759
Alignment:
Q  162 ggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||| | |||||| ||||||||  |||||||||  |||||||||||||||||    
T  36270699 ggcctaactcatccttacaaaaccggcttgtacagtgaggagtgcctcctctttataaact 36270759  T

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Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 43288382 - 43288306
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||| | | |||||| ||| |||| |  |||||||  |||||||||||||||||    
T  43288382 ccatgttcaaatttggggcctaactcacccttacaaaaccggattgtaagatgaggagtgcctcctctttataaact 43288306  T

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Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 31374882 - 31374807
Alignment:
Q  147 catgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||| ||||| |||| |||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  31374882 catgttgaaattcggggtctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 31374807  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 40703853 - 40703928
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    ||||||||||| ||||||||| | |||||  || ||||||| ||||||||   |||||||||||||||| ||||||    
T  40703853 aaatttggggcataactcatccttacaaatccgacttgtgaggtgaggagtgtctcctctttataaactctcatca 40703928  T

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Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 41670948 - 41670894
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggag 203  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||    
T  41670948 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggag 41670894  T

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Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 12518159 - 12518232
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||||||||||| | |||||| ||  |||| | | ||||||  || ||||||||||||||    
T  12518159 tgttaaaatttggggcctaactcatccttacaaaaccgaattgtaaggcgaggagtgccccctctttataaact 12518232  T

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Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 37272050 - 37272107
Alignment:
Q  165 ctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  37272050 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 37272107  T

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Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 40121607 - 40121680
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||| ||||||||| | |||||| ||||||||   ||||||||  |||||||| ||||||||    
T  40121607 tgttgaaatttggggcgtaactcatccttacaaaaccggcttgtagggtgaggagtgcctcctctctataaact 40121680  T

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Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 48116289 - 48116358
Alignment:
Q  153 aaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||| |||||||||||| | |||||| |||||||| | ||||||||    |||||||||||||||    
T  48116289 aaaatttggagcctaactcatccttacaaaaccggcttgtaaggtgaggagtgtgtcctctttataaact 48116358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 29780257 - 29780189
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||||| | | |||| || ||||| | ||||||||   ||||||||||||||||    
T  29780257 aaatttggggcctaactcatccttataaaaccgacttgtaaggtgaggagtgtctcctctttataaact 29780189  T

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Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 5496671 - 5496596
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    ||||||| || ||||||||||||||||||| | ||||||||||| |||||  ||||||||||||||||||||||||    
T  5496671 aaatttgaggtctaactcatcatcacaaaaccagcttgtgaagtaaggagtgcctcctctttataaactttcatca 5496596  T

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Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 18905972 - 18905898
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  18905972 atgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 18905898  T

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Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 30176451 - 30176533
Alignment:
Q  147 catgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||||| ||||| ||||||||||||||| | |||||| |||||||||| |||| |||  ||||||||||||||||| ||||||    
T  30176451 catgttgaaattcggggcctaactcatccttacaaaaccggcttgtgaggtgaagagtgcctcctctttataaactctcatca 30176533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 36997282 - 36997208
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  36997282 atgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 36997208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 20298505 - 20298578
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||||| |||||| | |||||| | ||||||||  |||||||||||||||||    
T  20298505 tgttgaaatttggggcctaactcatcattacaaaaccagcttgtaaggtgaggagtgcctcctctttataaact 20298578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 21085137 - 21085210
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||||| |||||| | |||||| | ||||||||  |||||||||||||||||    
T  21085137 tgttgaaatttggggcctaactcatcattacaaaaccagcttgtaaggtgaggagtgcctcctctttataaact 21085210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 32931516 - 32931443
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  32931516 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 32931443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 3183897 - 3183973
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  3183897 ccatgttgaaatttggggcctaactcatcgttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 3183973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 10989227 - 10989303
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  10989227 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 10989303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 34248469 - 34248401
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  34248469 aaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 34248401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 43599429 - 43599353
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  43599429 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 43599353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 43984302 - 43984378
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| ||||||||   ||||||||  |||||||||||||||||    
T  43984302 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtatggtgaggagtgcctcctctttataaact 43984378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 34248186 - 34248119
Alignment:
Q  155 aatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  34248186 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 34248119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 36037300 - 36037225
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||||||||| |||||||||| | |||||| |||||||||| ||||||||  | ||||||||||||||| ||||||    
T  36037300 aaatttggggtctaactcatccttacaaaaccggcttgtgaggtgaggagtgcatcctctttataaactctcatca 36037225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 10989022 - 10989096
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  10989022 atgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 10989096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 21653913 - 21653844
Alignment:
Q  155 aatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaacttt 224  Q
    |||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||| ||||||||||    
T  21653913 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctgtataaacttt 21653844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 15011015 - 15011091
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||| ||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  15011015 ccatgttgaaatttggggcttaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 15011091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 36039783 - 36039863
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||| |||||||||| |||||||||| | |||||| |||||||||| ||||| ||  | ||||||||||||||| ||||||    
T  36039783 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtgaggtgagtagtgcatcctctttataaactctcatca 36039863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 16454623 - 16454693
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    ||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||    
T  16454623 atgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 16454693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 40902382 - 40902455
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||| ||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  40902382 tgttgaaatttggggcctaacttatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 40902455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 8559699 - 8559627
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    |||||||  |||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||    
T  8559699 ccatgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 8559627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 15010809 - 15010881
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaa 220  Q
    ||||| ||||||||||||||||||||| | | |||| |||||||| | |||||||   |||||||||||||||    
T  15010809 atgttgaaatttggggcctaactcatccttataaaaccggcttgtaaggtgaggattgcctcctctttataaa 15010881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 21653445 - 21653369
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| |||||||| |||||||||||| | |||||| |||||||| | ||||| ||  |||||||| ||||||||    
T  21653445 ccatgttgaaatttggagcctaactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctatataaact 21653369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 22451463 - 22451383
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||| ||||||||||| ||||||||| | |||||| |||||||||| ||||| ||   |||||||||||||| | ||||||    
T  22451463 tgttgaaatttggggcataactcatccttacaaaaccggcttgtgaggtgagaagtgtctcctctttataaattctcatca 22451383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 36993936 - 36994004
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttat 217  Q
    |||| ||||||| ||||||||||||| | |||||| |||||||| | ||||||||  ||||||||||||    
T  36993936 tgttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttat 36994004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 42228877 - 42228813
Alignment:
Q  158 ttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||| |||||||||| | ||||||||||||||| | |||||||   |||||||||||||||||    
T  42228877 ttggggtctaactcatccttacaaaatcggcttgtaaggtgaggattgcctcctctttataaact 42228813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 20760647 - 20760722
Alignment:
Q  147 catgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||| ||||||||||||||||||||| | |||||| ||| |||| | |||||||   |||| ||||||||||||    
T  20760647 catgttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcatctttataaact 20760722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 23027822 - 23027887
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataa 219  Q
    ||||||||||||||||||||  | | |||| |||||||| | ||||||||  ||||||||||||||    
T  23027822 aaatttggggcctaactcattcttaaaaaaccggcttgtaaggtgaggagtgcctcctctttataa 23027887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 7729781 - 7729741
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtga 194  Q
    ||||||||||||||||||||| | |||||| ||||||||||    
T  7729781 aaatttggggcctaactcatccttacaaaaccggcttgtga 7729741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 7730016 - 7729968
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    |||| |||||||||||||||| | |||||| |||||||||| |||||||    
T  7730016 aaatatggggcctaactcatccttacaaaaccggcttgtgaggtgagga 7729968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 22277642 - 22277566
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||  ||||||||| | |||||| |||||||| | ||||| ||   ||||||||||||||||    
T  22277642 ccatgttgaaatttggggattaactcatccttacaaaaccggcttgtaaggtgagtagtgtctcctctttataaact 22277566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 13843815 - 13843739
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  13843815 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagcgcctcctctttataaact 13843739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 1028082 - 1028155
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| |||||||| ||| |||| | ||||||||  |||||||||||||||||    
T  1028082 tgttgaaatttggggcctaactcatcgtcacaaaaccggtttgtaaggtgaggagtgcctcctctttataaact 1028155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 2908755 - 2908831
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  2908755 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 2908831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 13413702 - 13413626
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  13413702 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 13413626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 20720536 - 20720612
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||| |||||||||| | |||||| |||||||| ||||||||||  |||||| |||| |||||    
T  20720536 ccatgttaaaatttggggtctaactcatccttacaaaaccggcttgtaaagtgaggagtgcctcctttttacaaact 20720612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 48297 - 48375
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaacttt 224  Q
    ||||||| ||||| ||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||||    
T  48297 ccatgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaacttt 48375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 12965234 - 12965308
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  | |||||||||||||||    
T  12965234 atgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaact 12965308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 37995626 - 37995696
Alignment:
Q  152 taaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  37995626 taaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaact 37995696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 15510509 - 15510566
Alignment:
Q  165 ctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||| |||||||||| |||||||   |||||||||||||||||    
T  15510509 ctaactcatcatcacaaaaccggcttgtgaggtgaggattgcctcctctttataaact 15510566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 24994184 - 24994111
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | ||||| ||  |||||||||||||||||    
T  24994184 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaact 24994111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 3763024 - 3762948
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | |||| ||   |||||||||||||||||    
T  3763024 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaagattgcctcctctttataaact 3762948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 24918271 - 24918203
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||||| | |||||| |||||||| | ||||| ||  |||||||||||||||||    
T  24918271 aaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaact 24918203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 34457214 - 34457138
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   | |||||||||||||||    
T  34457214 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcatcctctttataaact 34457138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 38663357 - 38663289
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||||| | |||||| |||||||| | |||| |||  |||||||||||||||||    
T  38663357 aaatttggggcctaactcatccttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaact 38663289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 28156147 - 28156072
Alignment:
Q  147 catgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||| ||||||||||||||| ||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  28156147 catgttgaaatttggggcctaattcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 28156072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 35526983 - 35527050
Alignment:
Q  155 aatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  35526983 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 35527050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 18107743 - 18107697
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtga 194  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  18107743 atgttgaaatttggggtctaactcatcatcacaaaaccggcttgtga 18107697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 20720343 - 20720417
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||||||||| ||||||||| | ||||||| || |||| ||||||||||  ||| |||||||||||||    
T  20720343 atgttgaaatttggggcttaactcatccttacaaaattggtttgtaaagtgaggagtgccttctctttataaact 20720417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 38131880 - 38131806
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||    ||||||||||||||||    
T  38131880 atgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgtctcctctttataaact 38131806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 1892091 - 1892159
Alignment:
Q  161 gggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||||||||||||| | |||||| |||||||| | ||||||||  ||||||||||||||| | ||||||    
T  1892091 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagggcctcctctttataaattctcatca 1892159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 24125180 - 24125108
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    ||||||| |||||||||| |||||||||| | |||||| |||||||| | |||||||   |||||||||||||    
T  24125180 ccatgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttata 24125108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 28358029 - 28358097
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||||| | |||||| |||||||| | |||||||    ||||||||||||||||    
T  28358029 aaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaact 28358097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 29432522 - 29432454
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||| | |||||| |||||||| | ||||| ||  |||||||||||||||||    
T  29432522 aaatttgtggcctaactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctttataaact 29432454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 38376849 - 38376773
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||  |||||||||||||||||||| | |||||| |||||||| | |||||||    ||||||||||||||||    
T  38376849 ccatgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaact 38376773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 40169027 - 40169099
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | ||||| |   |||||||||||||    
T  40169027 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagaattgcctcctctttata 40169099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 43490210 - 43490258
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    ||||||||||||||||||||| |||||||| |||||||| | |||||||    
T  43490210 aaatttggggcctaactcatcctcacaaaaccggcttgtaaggtgagga 43490258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 48099 - 48166
Alignment:
Q  155 aatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  48099 aattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 48166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 30758305 - 30758356
Alignment:
Q  151 ttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    |||||||||||||||||||||||| | |||||| |||||| ||| |||||||    
T  30758305 ttaaaatttggggcctaactcatccttacaaaaccggcttatgaggtgagga 30758356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 35527269 - 35527336
Alignment:
Q  155 aatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||| ||||||    
T  35527269 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttgtaaact 35527336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 18541826 - 18541764
Alignment:
Q  160 ggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||| | |||||||||||||||    |||||||  |||||||||||||||||    
T  18541826 ggggcctaactcatccttacaaaatcggcttgtaggttgaggagtgcctcctctttataaact 18541764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 873685 - 873758
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| | |||||| | |||||||   |||||||| ||||||||    
T  873685 tgttgaaatttggggcctaactcatccttacaaaacctgcttgtaaggtgaggaatgcctcctctctataaact 873758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 17129993 - 17130058
Alignment:
Q  164 cctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||||||||||||||| ||| || |||||||||||||||    ||||| |||||||||| ||||||    
T  17129993 cctaactcatcatcacgaaaccgacttgtgaagtgaggaatgactcctatttataaactctcatca 17130058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 34457418 - 34457345
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | ||||| |   | |||||||||||||||    
T  34457418 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagaattgcatcctctttataaact 34457345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 2716652 - 2716588
Alignment:
Q  158 ttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||| | |||||| |||||| | | ||||||||  ||||||| |||||||||    
T  2716652 ttggggcctaactcatccttacaaaaccggcttataaggtgaggagtgcctcctccttataaact 2716588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 2908556 - 2908624
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||  |||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  2908556 aaatttgggatctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 2908624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 21214187 - 21214263
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  21214187 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 21214263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 42768323 - 42768396
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  42768323 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 42768396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 43195899 - 43195826
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  43195899 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 43195826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 3976457 - 3976533
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||  |||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  3976457 ccatgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 3976533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 23054441 - 23054368
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| || ||||| | ||||||||  |||||||||||||||||    
T  23054441 tgttgaaatttggggcctaactcatccttacaaaaccgtcttgtaaggtgaggagtgcctcctctttataaact 23054368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 93448 - 93504
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    ||||||| ||||||||||| ||||||||| |||||||| |||||||||| |||||||    
T  93448 ccatgttgaaatttggggcataactcatcctcacaaaaccggcttgtgaggtgagga 93504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 93721 - 93777
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    ||||||| ||||||| ||||||||||||| |||||||| |||||||||| |||||||    
T  93721 ccatgttgaaatttgaggcctaactcatcctcacaaaaccggcttgtgaggtgagga 93777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 3976989 - 3977065
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||  |||||||||||||||||||| | |||||| |||||||| |  |||||||  |||||||||||||||||    
T  3976989 ccatgttgtaatttggggcctaactcatccttacaaaaccggcttgtaatttgaggagtgcctcctctttataaact 3977065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 11969162 - 11969094
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||| |||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  11969162 aaattttgggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 11969094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 17727517 - 17727446
Alignment:
Q  151 ttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||||||||| | |||||| |||||||| | |||||||   ||| |||||||||||||    
T  17727517 ttaaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaact 17727446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 883590 - 883663
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||| ||||| ||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  883590 tgttaaaattgggggcataactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 883663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 10849484 - 10849553
Alignment:
Q  153 aaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||||||| | |||||| |  ||||| | ||||||||  |||||||||||||||||    
T  10849484 aaaatttggggcctaactcatccttacaaaaccaacttgtaaggtgaggagtgcctcctctttataaact 10849553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 20998978 - 20999051
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||| ||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  20998978 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 20999051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 25441811 - 25441738
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||| ||||||||||| | |||||| |||||||| | ||||||||  || ||||||||||||||    
T  25441811 tgttgaaatttgggtcctaactcatccttacaaaaccggcttgtaaggtgaggagtgccccctctttataaact 25441738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 30156315 - 30156250
Alignment:
Q  157 tttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||| ||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  30156315 tttggggcctaacttatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 30156250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 30160434 - 30160369
Alignment:
Q  157 tttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||| | |||||| |||||||| | || |||||  |||||||||||||||||    
T  30160434 tttggggcctaactcatccttacaaaaccggcttgtaaggtaaggagtgcctcctctttataaact 30160369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 31761446 - 31761373
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||| ||||||||| | ||||||||||||||| | |||||||   |||||||| ||||||||    
T  31761446 tgttgaaatttggggcttaactcatccttacaaaatcggcttgtaaggtgaggattgcctcctctatataaact 31761373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 33985760 - 33985829
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||    
T  33985760 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 33985829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 883968 - 883892
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||| ||||||||||||||| | |||||| |||||||| | |||||||   ||||  |||||||||||    
T  883968 ccatgttaaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctctcctttataaact 883892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 902033 - 901965
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||||| | |||||| |||||||| | ||||||||  | ||||||| |||||||    
T  902033 aaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctcttcataaact 901965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 6148920 - 6148964
Alignment:
Q  158 ttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||    
T  6148920 ttggggcttaactcattatcacaaaatcagcttgtgaagtgagga 6148964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 12432016 - 12431940
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| |||||||||||||| |||||| | |||||| |||||||| | |||||||    ||||||||||||||||    
T  12432016 ccatgttgaaatttggggcctagctcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaact 12431940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 37812499 - 37812555
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgagga 202  Q
    |||||||  |||||||||||||||||||| | ||||||||| ||||||| |||||||    
T  37812499 ccatgttgtaatttggggcctaactcatccttacaaaatcgacttgtgaggtgagga 37812555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 38760315 - 38760379
Alignment:
Q  158 ttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||| | |||||| |||||||| | |||| |||  |||||||||||||||||    
T  38760315 ttggggcctaactcatcgttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaact 38760379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 39596700 - 39596768
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||||||||||||| |||||||| ||| |||| | | ||||||  |||||||||||||||||    
T  39596700 aaattgggggcctaactcatcctcacaaaaccggattgtaaggcgaggagtgcctcctctttataaact 39596768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 34775472 - 34775401
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaa 220  Q
    |||| ||||| ||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||    
T  34775472 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaa 34775401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 7877956 - 7877886
Alignment:
Q  152 taaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||| ||||| ||||| | |||||| |||||||| | ||||||||   ||||||||||||||||    
T  7877956 taaaatttgggacctaattcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaact 7877886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 25441962 - 25441892
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataa 219  Q
    |||| ||||||||| |||||||| || | |||||| |||||||| | ||||||||  ||||||||||||||    
T  25441962 tgttgaaatttgggtcctaactcgtccttacaaaaccggcttgtaaggtgaggagggcctcctctttataa 25441892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 6183355 - 6183428
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| |||||||||| |||||||||| | |||||| |||||||| | ||||| ||   ||||||||||||||||    
T  6183355 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgagaagtgtctcctctttataaact 6183428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 25286257 - 25286322
Alignment:
Q  157 tttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||| | |||||| |||||||| | ||||||||    |||||||||||||||    
T  25286257 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgtttcctctttataaact 25286322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 32667298 - 32667225
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | || ||||   |||||||| ||||||||    
T  32667298 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtaaggattgcctcctctatataaact 32667225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 3435472 - 3435548
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||  |||||||||||||||||||| | |||||| ||| |||| | |||||||   |||||||| ||||||||    
T  3435472 ccatgttgtaatttggggcctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctgtataaact 3435548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 10429849 - 10429781
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||| |||||||||| | |||||| |||||||| |  |||||||   ||||||||||||||||    
T  10429849 aaatttggggtctaactcatccttacaaaaccggcttgtaagatgaggagtgtctcctctttataaact 10429781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 174
Target Start/End: Original strand, 29695531 - 29695559
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatc 174  Q
    |||||||||||||||||||||||||||||    
T  29695531 ccatgttaaaatttggggcctaactcatc 29695559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 32667085 - 32667049
Alignment:
Q  156 atttggggcctaactcatcatcacaaaatcggcttgt 192  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  32667085 atttggggcctaactcatcattacaaaaccggcttgt 32667049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 3e-16; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 11316961 - 11316878
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    ||||||| ||||| ||||||||||||| | | |||||| |||||||||||||||||||  || |||||||||||||| ||||||    
T  11316961 ccatgttgaaattgggggcctaactcaaccttacaaaaccggcttgtgaagtgaggagtgccccctctttataaactctcatca 11316878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 30526956 - 30526873
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    ||||||| ||||| ||||||||||||| | | |||||| | ||||||||||||||||| ||| |||||||||||||| ||||||    
T  30526956 ccatgttgaaattgggggcctaactcaaccttacaaaaccagcttgtgaagtgaggagttccccctctttataaactctcatca 30526873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 10418333 - 10418407
Alignment:
Q  155 aatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||||||||||||||||||| | |||||| |||||||| | ||||||||  ||||||||||||||||| ||||||    
T  10418333 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctcatca 10418407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 1744831 - 1744904
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  1744831 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 1744904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 15102613 - 15102694
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggctt-gtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||| |||||||||| |||||||||| | |||||| |||||| |||||||||||||  ||||||||||||||||| ||||||    
T  15102613 tgttgaaatttggggtctaactcatccttacaaaaccggctttgtgaagtgaggagtgcctcctctttataaactctcatca 15102694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 8144127 - 8144059
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||||||||||||||||    
T  8144127 aaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaact 8144059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 16876996 - 16877072
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  16876996 ccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 16877072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 16590302 - 16590228
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaa 220  Q
    ||||||| |||||||||| |||||||||| | |||||| |||||||| |||||||||   |||||||||||||||    
T  16590302 ccatgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttataaa 16590228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 16605078 - 16605152
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaa 220  Q
    ||||||| |||||||||| |||||||||| | |||||| |||||||| |||||||||   |||||||||||||||    
T  16605078 ccatgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttataaa 16605152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 16876819 - 16876892
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  16876819 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 16876892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 24055098 - 24055171
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||  |||| ||||||||||||    
T  24055098 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcgtctttataaact 24055171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 28149908 - 28149835
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  28149908 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 28149835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 10733432 - 10733500
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||||| | |||||| |||||||| | ||||||||   ||||||||||||||||    
T  10733432 aaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaact 10733500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 11317162 - 11317083
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||||||||| ||||| ||||||| | | |||||| |||||||||||||||||||  || |||||||||||||| ||||||    
T  11317162 tgttaaaattgggggc-taactcaaccttacaaaaccggcttgtgaagtgaggagtgccccctctttataaactctcatca 11317083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 17147891 - 17147967
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||| ||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  17147891 ccatgttgaaatttgtggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 17147967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 24558693 - 24558629
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    ||||||||||||||||||||| |||||||| |||||||| | |||||||   |||||||||||||    
T  24558693 aaatttggggcctaactcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttata 24558629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 27914320 - 27914388
Alignment:
Q  154 aaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||||||||||||||||| | |||||| |||||||| | || |||||  |||||||||||||||||    
T  27914320 aaatttggggcctaactcatccttacaaaaccggcttgtaaggtaaggagtgcctcctctttataaact 27914388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 15101099 - 15101173
Alignment:
Q  148 atgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||| ||||| ||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  15101099 atgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 15101173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 19054608 - 19054535
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| |||||||||| |||||||||| | |||||| |||||||| | ||||||||  |||| ||||||||||||    
T  19054608 tgttgaaatttggggactaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcatctttataaact 19054535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 19712393 - 19712466
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | ||||||||||||||| | ||| |||   ||||||| |||||||||    
T  19712393 tgttgaaatttggggcctaactcatccttacaaaatcggcttgtaaggtggggattgcctcctccttataaact 19712466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 21067046 - 21067119
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| |||||||||||||||| |||| | |||||| |||||||| | | ||||||  |||||||||||||||||    
T  21067046 tgttgaaatttggggcctaacacatctttacaaaaccggcttgtaaggggaggagtgcctcctctttataaact 21067119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 21088837 - 21088910
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| |||||||||||||||| |||| | |||||| |||||||| | | ||||||  |||||||||||||||||    
T  21088837 tgttgaaatttggggcctaacacatctttacaaaaccggcttgtaaggggaggagtgcctcctctttataaact 21088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 11313368 - 11313440
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttata 218  Q
    ||||||| ||||||||||||||||||||| | ||||||  ||||||| | |||||||   |||||||||||||    
T  11313368 ccatgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggattgcctcctctttata 11313440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 19712595 - 19712671
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||  |||||||||||||||||||| | |||||| | |||||| | |||||||   |||||||||||||||||    
T  19712595 ccatgttgtaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaact 19712671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 15102741 - 15102821
Alignment:
Q  147 catgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaactttcatca 229  Q
    |||||| |||||||||| |  ||||||| | |||||| ||| |||||||||||||||   |||||||||||||||| ||||||    
T  15102741 catgttgaaatttggggtc--actcatccttacaaaaccggtttgtgaagtgaggagtgactcctctttataaactctcatca 15102821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 12134472 - 12134545
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| ||| |||| | || |||||   ||||||||||||||||    
T  12134472 tgttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggttaggagtgtctcctctttataaact 12134545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 17096687 - 17096760
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| |||||||||| |||||||||| | |||||| ||||||||   | |||||| | ||||||||||||||||    
T  17096687 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtacggcgaggagtttctcctctttataaact 17096760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 24558903 - 24558830
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| | |||||| | |||||||    ||||||||||||||||    
T  24558903 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgtctcctctttataaact 24558830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 26098460 - 26098384
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||||||||||||||||||| | |||||| ||| |  | | ||||||||   ||||||||||||||||    
T  26098460 ccatgttgaaatttggggcctaactcatccttacaaaagcggttcataaggtgaggagtgtctcctctttataaact 26098384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 13424 - 13348
Alignment:
Q  146 ccatgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    ||||||| ||||| ||||||||||||||| |||||||| |||||||| | |||||||   |||||||||||||||||    
T  13424 ccatgttgaaattcggggcctaactcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 13348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 13628 - 13555
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||| ||||||||||||||| || ||||| |||||||| | |||||||   |||||||||||||||||    
T  13628 tgttgaaattcggggcctaactcatcctcgcaaaaccggcttgtaaggtgaggattgcctcctctttataaact 13555  T

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Target: scaffold0989 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 2936 - 3009
Alignment:
Q  149 tgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||| | |||||| | |||||| |||||||||   |||||||||||||||||    
T  2936 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaagtgaggattgcctcctctttataaact 3009  T

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Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 76961 - 76894
Alignment:
Q  155 aatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||||||||||||||||||| | |||||| |||||||| | |||||||   |||||||||||||||||    
T  76961 aatttggggcctaactcatctttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 76894  T

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Target: scaffold1138 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 2066 - 2141
Alignment:
Q  147 catgttaaaatttggggcctaactcatcatcacaaaatcggcttgtgaagtgaggagatcctcctctttataaact 222  Q
    |||| ||||||||||||||||||||||| | ||||||  ||||||| | |||||||   |||||||| ||||||||    
T  2066 catgataaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggattgcctcctctatataaact 2141  T

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