View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10440_low_8 (Length: 258)
Name: NF10440_low_8
Description: NF10440
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10440_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 9 - 251
Target Start/End: Complemental strand, 39626767 - 39626525
Alignment:
| Q |
9 |
aagaacatctaaaacccataattgtcacatttaacatagtcaaccagaataagtactttttctccgtgaattcatgcttagaatctatacagaacaacta |
108 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
39626767 |
aagaacatctaaaacccatagttgtcacatttaacatagtcaaccagaataagtactttttctccgtgaattcatgcttataatctatacagaacaacta |
39626668 |
T |
|
| Q |
109 |
gttgtgaatgtccacccattacatacgctacggcttttatctttccaaataatttttgtactcacttaaatgctcctaaaagcaaaaaagctcagcgaca |
208 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
39626667 |
gttgtgaatgtccacccattacatacgctacggcttttatctttccaaataatttttgtacccacttaaatgctcctaaaagcaaaaaagctcagcgaca |
39626568 |
T |
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| Q |
209 |
aaccttggcagtgtatagtgcttatttctggccctttcatctc |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39626567 |
aaccttggcagtgtatagtgcttatttctggccctttcatctc |
39626525 |
T |
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