View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10441_low_29 (Length: 331)
Name: NF10441_low_29
Description: NF10441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10441_low_29 |
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Alignment Details
Target: chr5 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 10050390 - 10050079
Alignment:
| Q |
1 |
ttattttgttttgaaatcaatggagtgtattcaatttgactattgcatgtgtgtacgtaaatcccctctttatactccatgtcatatatggtttggatgt |
100 |
Q |
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| T |
10050390 |
ttattttgttttgaaatcaatggagtgtattcaatttgactattgcatgtgtgtacgtaaatcccttctttatactccatgtcatatatggtttggatgt |
10050291 |
T |
|
| Q |
101 |
gaaccttcaccaataataatcaaatagtttagaaaatatttgaagttcaaaaagcatgtatttaacaaaaagaattacgggttcaatttaacaaattcta |
200 |
Q |
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| T |
10050290 |
gaagcttcaccaataataatcaaatagtttagaaaatatttgaagttcaaaaagcatgtatttaacaaaaagaattacgggttgtatttaacaaattcta |
10050191 |
T |
|
| Q |
201 |
ttactagagaagattgttaaaactcatctttctaacaatatattgcttcatttatcatactacgagtttttaaggattttaccacattaagcaaaaagga |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10050190 |
ttactagagaagattgttaaaactcatctttctaacaatatattgcttcatttatcatactacgagtttttaaggattttaccacattaagcaaaaagga |
10050091 |
T |
|
| Q |
301 |
atagatagcttc |
312 |
Q |
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|||||||||||| |
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| T |
10050090 |
atagatagcttc |
10050079 |
T |
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