View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10441_low_31 (Length: 325)

Name: NF10441_low_31
Description: NF10441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10441_low_31
NF10441_low_31
[»] chr7 (1 HSPs)
chr7 (15-309)||(30150960-30151254)


Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 15 - 309
Target Start/End: Original strand, 30150960 - 30151254
Alignment:
Q  15 atcaaataaacgcccagtatacaatttccaactcttgcaaaagagtattgaacaagatcaaataaatgtaatcttgacaaatgtcacctctaatggtctt 114  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30150960 atcaaataaacgtccagtataaaatttccaactcttgcaaaagagtattgaacaagatcaaataaatgtaatcttgacaaatgtcacctctaatggtctt 30151059  T
Q  115 ccatatatcacatttgatactacctattaagtaggccaaccagtgttgtgccttcgttgataacttaagaggctttcatctattcgttttcttatgtctt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30151060 ccatatatcacatttgatactacctattaagtaggccaaccagtgttgtgccttcgttgataacttaagaggctttcatctattcgttttcttatgtctt 30151159  T
Q  215 ttgatatattgttttgtgcttttatgcaggtgaaaaagcgtgctgttgaacttgctaacgccatgaaaaatgaagatggggtagcaggagcagtt 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30151160 ttgatatattgttttgtgcttttatgcaggtgaaaaagcgtgctgttgaacttgctaacgccatgaaaaatgaagatggggtagcaggagcagtt 30151254  T

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