View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10441_low_44 (Length: 261)
Name: NF10441_low_44
Description: NF10441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10441_low_44 |
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Alignment Details
Target: chr8 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 4610747 - 4610500
Alignment:
| Q |
1 |
taaaaagaatgtacacaaacacaaatgaaaaaacaaattccaaagcactaactaacatcattacatctttagtttcctctcaaatttctccaatactgtg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4610747 |
taaaaagaatgtacacaaacacaaatgaaaaaacaaattccaaagcactaactaacatcattacatctttagtttcctctcaaatttctccaatactgtg |
4610648 |
T |
|
| Q |
101 |
acaactaaaaatgtcaagaattccatgattcttcatcttcttgttttgtctgaaaattggatgaaggtttttgcattctaacaccactgatactgtttct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4610647 |
acaactaaaaatgtcaagaattccatgattcttcatcttcttgttttgtctgaaaattggatgaaggtttttgcattctaacaccactgatactgtttct |
4610548 |
T |
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| Q |
201 |
cgcagacatcatttcattgagtgaaagccttttcttgacttcaggtct |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4610547 |
cgcagacatcatttcattgagtgaaagccttttcttgacttcaggtct |
4610500 |
T |
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