View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10441_low_55 (Length: 241)

Name: NF10441_low_55
Description: NF10441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10441_low_55
NF10441_low_55
[»] chr4 (31 HSPs)
chr4 (128-195)||(30770657-30770724)
chr4 (92-135)||(12878667-12878710)
chr4 (92-126)||(8974270-8974304)
chr4 (94-131)||(4431288-4431325)
chr4 (92-133)||(48613055-48613095)
chr4 (92-127)||(1952735-1952770)
chr4 (92-127)||(3475486-3475521)
chr4 (92-131)||(8590641-8590680)
chr4 (92-127)||(13033148-13033183)
chr4 (92-127)||(26144158-26144193)
chr4 (92-127)||(33294941-33294976)
chr4 (92-127)||(35370410-35370445)
chr4 (92-127)||(36405659-36405694)
chr4 (92-127)||(36405875-36405910)
chr4 (92-127)||(46360915-46360950)
chr4 (92-127)||(47858451-47858486)
chr4 (92-127)||(54097100-54097135)
chr4 (93-127)||(12144545-12144579)
chr4 (92-126)||(20514909-20514943)
chr4 (94-131)||(1952984-1953021)
chr4 (92-129)||(5326320-5326357)
chr4 (92-129)||(22451931-22451968)
chr4 (92-129)||(34318403-34318440)
chr4 (94-135)||(51902038-51902079)
chr4 (92-132)||(6439180-6439220)
chr4 (100-132)||(15522903-15522935)
chr4 (92-120)||(15782533-15782561)
chr4 (96-128)||(26144373-26144405)
chr4 (92-131)||(34853376-34853416)
chr4 (94-134)||(40450251-40450291)
chr4 (92-132)||(46360683-46360723)
[»] chr2 (25 HSPs)
chr2 (92-131)||(5558474-5558513)
chr2 (94-130)||(32596402-32596438)
chr2 (92-131)||(29640759-29640798)
chr2 (92-129)||(38358513-38358550)
chr2 (92-132)||(14793477-14793517)
chr2 (92-128)||(17920250-17920286)
chr2 (92-127)||(7327768-7327803)
chr2 (92-127)||(8214581-8214616)
chr2 (92-127)||(16139138-16139173)
chr2 (92-127)||(24951904-24951939)
chr2 (92-127)||(24952077-24952112)
chr2 (92-127)||(28739408-28739443)
chr2 (92-127)||(32845457-32845492)
chr2 (92-127)||(32845684-32845719)
chr2 (92-127)||(36944252-36944287)
chr2 (92-127)||(43766503-43766538)
chr2 (94-129)||(44610925-44610960)
chr2 (92-127)||(45632747-45632782)
chr2 (92-130)||(8467204-8467242)
chr2 (92-129)||(31108605-31108642)
chr2 (94-127)||(33441505-33441538)
chr2 (92-125)||(40385245-40385278)
chr2 (92-128)||(17688175-17688211)
chr2 (92-128)||(19272661-19272697)
chr2 (93-129)||(38470982-38471018)
[»] chr6 (15 HSPs)
chr6 (92-134)||(27967459-27967501)
chr6 (92-131)||(7313447-7313486)
chr6 (92-129)||(33352637-33352674)
chr6 (92-128)||(7017320-7017356)
chr6 (92-131)||(2181313-2181352)
chr6 (92-127)||(7017070-7017105)
chr6 (92-127)||(25562154-25562189)
chr6 (92-127)||(26101668-26101703)
chr6 (92-127)||(33552792-33552827)
chr6 (92-126)||(19417947-19417981)
chr6 (94-127)||(31826215-31826248)
chr6 (94-127)||(33225442-33225475)
chr6 (92-127)||(1310093-1310129)
chr6 (94-126)||(5832340-5832372)
chr6 (92-128)||(10790356-10790391)
[»] chr5 (15 HSPs)
chr5 (92-131)||(9672893-9672932)
chr5 (92-133)||(28519649-28519689)
chr5 (92-129)||(36518881-36518918)
chr5 (92-128)||(4633953-4633989)
chr5 (92-128)||(13012434-13012470)
chr5 (92-128)||(13083844-13083880)
chr5 (92-127)||(2724484-2724519)
chr5 (92-127)||(10598319-10598354)
chr5 (92-127)||(25963143-25963178)
chr5 (92-127)||(27433520-27433555)
chr5 (92-127)||(28593546-28593581)
chr5 (92-130)||(13012647-13012684)
chr5 (92-128)||(1497328-1497364)
chr5 (96-132)||(5661900-5661936)
chr5 (92-128)||(13924368-13924404)
[»] chr3 (23 HSPs)
chr3 (92-127)||(31341226-31341261)
chr3 (92-131)||(33898069-33898108)
chr3 (92-128)||(40066705-40066741)
chr3 (92-127)||(1351489-1351524)
chr3 (92-127)||(11761082-11761117)
chr3 (92-127)||(17261025-17261060)
chr3 (92-131)||(19598930-19598969)
chr3 (92-131)||(19756858-19756897)
chr3 (92-127)||(35359472-35359507)
chr3 (92-127)||(35434094-35434129)
chr3 (92-127)||(39846602-39846637)
chr3 (92-127)||(44986763-44986798)
chr3 (92-127)||(48418654-48418689)
chr3 (92-127)||(54012610-54012645)
chr3 (92-131)||(54087518-54087557)
chr3 (92-127)||(55090265-55090300)
chr3 (96-126)||(9161250-9161280)
chr3 (93-127)||(29853650-29853684)
chr3 (92-132)||(16308100-16308141)
chr3 (94-127)||(33898296-33898329)
chr3 (94-127)||(46994115-46994148)
chr3 (92-140)||(3820481-3820529)
chr3 (92-127)||(29013406-29013442)
[»] chr1 (17 HSPs)
chr1 (92-131)||(3662569-3662608)
chr1 (92-131)||(7454885-7454924)
chr1 (92-130)||(35384478-35384516)
chr1 (92-128)||(37847793-37847829)
chr1 (92-128)||(39160554-39160590)
chr1 (92-127)||(16555325-16555360)
chr1 (92-127)||(26486791-26486826)
chr1 (94-129)||(27142828-27142863)
chr1 (92-127)||(52413121-52413156)
chr1 (92-133)||(16555551-16555592)
chr1 (92-129)||(46583824-46583861)
chr1 (94-131)||(51809752-51809789)
chr1 (92-128)||(972840-972876)
chr1 (92-132)||(23889672-23889712)
chr1 (92-127)||(24465903-24465939)
chr1 (95-131)||(29075587-29075623)
chr1 (92-127)||(36454505-36454541)
[»] chr8 (20 HSPs)
chr8 (92-134)||(3785518-3785560)
chr8 (92-134)||(23428729-23428771)
chr8 (94-127)||(39301881-39301914)
chr8 (92-128)||(18367025-18367061)
chr8 (92-128)||(19158189-19158225)
chr8 (92-127)||(21692627-21692662)
chr8 (92-127)||(22686743-22686778)
chr8 (92-127)||(23564102-23564137)
chr8 (92-127)||(38687533-38687568)
chr8 (92-127)||(41708828-41708863)
chr8 (92-127)||(43383012-43383047)
chr8 (92-127)||(45530502-45530537)
chr8 (92-126)||(3448894-3448928)
chr8 (92-129)||(11105768-11105806)
chr8 (92-130)||(43889052-43889089)
chr8 (92-129)||(23566148-23566184)
chr8 (97-125)||(12501995-12502023)
chr8 (92-124)||(12523551-12523583)
chr8 (92-124)||(15152311-15152343)
chr8 (95-131)||(34845280-34845316)
[»] chr7 (17 HSPs)
chr7 (94-127)||(47973882-47973915)
chr7 (92-127)||(17167808-17167843)
chr7 (92-127)||(18655376-18655411)
chr7 (92-127)||(28000140-28000175)
chr7 (92-127)||(31417524-31417559)
chr7 (92-127)||(43596534-43596569)
chr7 (92-127)||(44412554-44412589)
chr7 (92-127)||(45639746-45639781)
chr7 (92-125)||(15108090-15108123)
chr7 (92-132)||(22335540-22335581)
chr7 (92-129)||(35158181-35158218)
chr7 (96-128)||(1263784-1263816)
chr7 (92-128)||(5031921-5031957)
chr7 (92-127)||(13701984-13702020)
chr7 (92-127)||(24374523-24374559)
chr7 (92-127)||(45633720-45633756)
chr7 (92-128)||(48848162-48848198)
[»] scaffold0192 (1 HSPs)
scaffold0192 (92-127)||(14469-14504)
[»] scaffold0053 (1 HSPs)
scaffold0053 (92-127)||(29899-29934)
[»] scaffold0032 (1 HSPs)
scaffold0032 (97-127)||(71652-71682)
[»] scaffold1797 (1 HSPs)
scaffold1797 (92-127)||(472-508)
[»] scaffold0334 (1 HSPs)
scaffold0334 (92-128)||(4323-4358)
[»] scaffold0025 (1 HSPs)
scaffold0025 (92-131)||(2752-2792)
[»] scaffold0010 (1 HSPs)
scaffold0010 (92-127)||(145570-145606)


Alignment Details
Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 30770724 - 30770657
Alignment:
Q  128 aaaataatcaaatgagaaaaatgtaacttaatgaatttttgtcaaaaaagccaattaatagtaaccag 195  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30770724 aaaatactcaaacgagaaaaatgtaacttaatgaatttttgtcaaaaaagccaattaatagtaaccag 30770657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 12878710 - 12878667
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaataat 135  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  12878710 tgacctatattacagggggtaaagcaccattaaccctaaataat 12878667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 8974304 - 8974270
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacc 126  Q
    |||||||||||||||||||||||||||||||||||    
T  8974304 tgacctatattacaggggataaagcaccattaacc 8974270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 4431325 - 4431288
Alignment:
Q  94 acctatattacaggggataaagcaccattaacccaaaa 131  Q
    |||||||||||||||| |||||||||||||||||||||    
T  4431325 acctatattacagggggtaaagcaccattaacccaaaa 4431288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 48613095 - 48613055
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaata 133  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  48613095 tgacctatattacagggg-taaagcaccattaacccaaaata 48613055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 1952770 - 1952735
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  1952770 tgacctatattacagggggtaaagcaccattaaccc 1952735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 3475521 - 3475486
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  3475521 tgacctatattacagggggtaaagcaccattaaccc 3475486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 8590680 - 8590641
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaa 131  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  8590680 tgacctatattacagggggtaaatcaccattaacccaaaa 8590641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 13033148 - 13033183
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  13033148 tgacctatattacagggggtaaagcaccattaaccc 13033183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 26144193 - 26144158
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  26144193 tgacctatattacagggggtaaagcaccattaaccc 26144158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 33294976 - 33294941
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  33294976 tgacctatattacagggggtaaagcaccattaaccc 33294941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 35370410 - 35370445
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  35370410 tgacctatattacagggggtaaagcaccattaaccc 35370445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 36405694 - 36405659
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  36405694 tgacctatattacagggggtaaagcaccattaaccc 36405659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 36405875 - 36405910
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  36405875 tgacctatattacagggggtaaagcaccattaaccc 36405910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 46360915 - 46360950
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  46360915 tgacctatattacagggggtaaagcaccattaaccc 46360950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 47858451 - 47858486
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  47858451 tgacctatattacagggggtaaagcaccattaaccc 47858486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 54097135 - 54097100
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  54097135 tgacctatattacagggggtaaagcaccattaaccc 54097100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 12144579 - 12144545
Alignment:
Q  93 gacctatattacaggggataaagcaccattaaccc 127  Q
    ||||||||||||||||| |||||||||||||||||    
T  12144579 gacctatattacagggggtaaagcaccattaaccc 12144545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 126
Target Start/End: Original strand, 20514909 - 20514943
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacc 126  Q
    |||||||||||||||||| ||||||||||||||||    
T  20514909 tgacctatattacagggggtaaagcaccattaacc 20514943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 1952984 - 1953021
Alignment:
Q  94 acctatattacaggggataaagcaccattaacccaaaa 131  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  1952984 acctatattacagggggtaaagcaccgttaacccaaaa 1953021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 5326320 - 5326357
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaa 129  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  5326320 tgacctatattacaggggttaaagtaccattaacccaa 5326357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 22451968 - 22451931
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaa 129  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  22451968 tgacctatattacagggggtaaaacaccattaacccaa 22451931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 34318440 - 34318403
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaa 129  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  34318440 tgacctatattacagggggtaaaacaccattaacccaa 34318403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 51902079 - 51902038
Alignment:
Q  94 acctatattacaggggataaagcaccattaacccaaaataat 135  Q
    |||||||||||||||| |||| ||||||||||||| ||||||    
T  51902079 acctatattacagggggtaaaacaccattaacccagaataat 51902038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 6439220 - 6439180
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaat 132  Q
    |||||||||||||||||| |||||||| |||||||| ||||    
T  6439220 tgacctatattacagggggtaaagcactattaaccctaaat 6439180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 15522903 - 15522935
Alignment:
Q  100 attacaggggataaagcaccattaacccaaaat 132  Q
    |||||||||| ||||||||||||||||||||||    
T  15522903 attacagggggtaaagcaccattaacccaaaat 15522935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 120
Target Start/End: Original strand, 15782533 - 15782561
Alignment:
Q  92 tgacctatattacaggggataaagcacca 120  Q
    |||||||||||||||||||||||||||||    
T  15782533 tgacctatattacaggggataaagcacca 15782561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 26144373 - 26144405
Alignment:
Q  96 ctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||| ||||||||||||||||||    
T  26144373 ctatattacagggggtaaagcaccattaaccca 26144405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 34853376 - 34853416
Alignment:
Q  92 tgacctatattaca-ggggataaagcaccattaacccaaaa 131  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  34853376 tgacctatattacaagggggtaaagcaccattaacccaaaa 34853416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 40450291 - 40450251
Alignment:
Q  94 acctatattacaggggataaagcaccattaacccaaaataa 134  Q
    |||||||||||||||| |||| |||||||||||| ||||||    
T  40450291 acctatattacagggggtaaaacaccattaaccctaaataa 40450251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 46360723 - 46360683
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaat 132  Q
    |||||||||||||||||| |||| |||||||||||| ||||    
T  46360723 tgacctatattacaggggctaaaacaccattaacccgaaat 46360683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 5558474 - 5558513
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaa 131  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5558474 tgacctatattacaggggataaagcaccattaacccaaaa 5558513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 32596438 - 32596402
Alignment:
Q  94 acctatattacaggggataaagcaccattaacccaaa 130  Q
    |||||||||||||||||||||||||||||||||||||    
T  32596438 acctatattacaggggataaagcaccattaacccaaa 32596402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 29640798 - 29640759
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaa 131  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  29640798 tgacctatattacagggggtaaagcaccattaacccaaaa 29640759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 38358513 - 38358550
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaa 129  Q
    |||||||||||||||||| |||||||||||||||||||    
T  38358513 tgacctatattacagggggtaaagcaccattaacccaa 38358550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 14793477 - 14793517
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaat 132  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  14793477 tgacctatattacagggggtaaagcaccattaaccctaaat 14793517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 17920250 - 17920286
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||||| ||||||||||||||||||    
T  17920250 tgacctatattacagggggtaaagcaccattaaccca 17920286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 7327803 - 7327768
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  7327803 tgacctatattacagggggtaaagcaccattaaccc 7327768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 8214581 - 8214616
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  8214581 tgacctatattacagggggtaaagcaccattaaccc 8214616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 16139138 - 16139173
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    ||||||||||||||||||||||||||| ||||||||    
T  16139138 tgacctatattacaggggataaagcactattaaccc 16139173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 24951939 - 24951904
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  24951939 tgacctatattacaggggttaaagcaccattaaccc 24951904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 24952077 - 24952112
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  24952077 tgacctatattacagggggtaaagcaccattaaccc 24952112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 28739443 - 28739408
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  28739443 tgacctatattacagggggtaaagcaccattaaccc 28739408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 32845492 - 32845457
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  32845492 tgacctatattacagggggtaaagcaccattaaccc 32845457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 32845684 - 32845719
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  32845684 tgacctatattacagggggtaaagcaccattaaccc 32845719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 36944252 - 36944287
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  36944252 tgacctatattacagggggtaaagcaccattaaccc 36944287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 43766503 - 43766538
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  43766503 tgacctatattacagggggtaaagcaccattaaccc 43766538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 44610960 - 44610925
Alignment:
Q  94 acctatattacaggggataaagcaccattaacccaa 129  Q
    |||||||||||||||| |||||||||||||||||||    
T  44610960 acctatattacagggggtaaagcaccattaacccaa 44610925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 45632747 - 45632782
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||| |||||||||||||||||||||||    
T  45632747 tgacctatattaaaggggataaagcaccattaaccc 45632782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 8467242 - 8467204
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaa 130  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  8467242 tgacctatattacagggagtaaagcaccattaacccaaa 8467204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 31108605 - 31108642
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaa 129  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  31108605 tgacctatattacagggggtaaaacaccattaacccaa 31108642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 33441538 - 33441505
Alignment:
Q  94 acctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||| |||||||||||||||||    
T  33441538 acctatattacagggggtaaagcaccattaaccc 33441505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 40385278 - 40385245
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaac 125  Q
    |||||||||||||||||| |||||||||||||||    
T  40385278 tgacctatattacagggggtaaagcaccattaac 40385245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 17688175 - 17688211
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||||| |||| |||||||||||||    
T  17688175 tgacctatattacagggggtaaaacaccattaaccca 17688211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 19272697 - 19272661
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  19272697 tgacctatattacaggggataaaacactattaaccca 19272661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 38470982 - 38471018
Alignment:
Q  93 gacctatattacaggggataaagcaccattaacccaa 129  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  38470982 gacctatattacagggggtaaaacaccattaacccaa 38471018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 27967501 - 27967459
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaataa 134  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  27967501 tgacctatattacagggggtaaagcaccattaacccaaaataa 27967459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 7313486 - 7313447
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaa 131  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  7313486 tgacctatattacagggggtaaagcaccattaacccaaaa 7313447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 33352637 - 33352674
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaa 129  Q
    |||||||||||||||||| |||||||||||||||||||    
T  33352637 tgacctatattacagggggtaaagcaccattaacccaa 33352674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 7017320 - 7017356
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||||| ||||||||||||||||||    
T  7017320 tgacctatattacagggggtaaagcaccattaaccca 7017356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 2181352 - 2181313
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaa 131  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  2181352 tgacctatattacagggggtaaaacaccattaacccaaaa 2181313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 7017105 - 7017070
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  7017105 tgacctatattacagggggtaaagcaccattaaccc 7017070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 25562189 - 25562154
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  25562189 tgacctatattacagggggtaaagcaccattaaccc 25562154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 26101703 - 26101668
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  26101703 tgacctatattacagggggtaaagcaccattaaccc 26101668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 33552792 - 33552827
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    ||||||||||||||||||||||| ||||||||||||    
T  33552792 tgacctatattacaggggataaaacaccattaaccc 33552827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 19417981 - 19417947
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacc 126  Q
    |||||||||||||||||| ||||||||||||||||    
T  19417981 tgacctatattacagggggtaaagcaccattaacc 19417947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 31826248 - 31826215
Alignment:
Q  94 acctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||| |||||||||||||||||    
T  31826248 acctatattacagggggtaaagcaccattaaccc 31826215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 33225475 - 33225442
Alignment:
Q  94 acctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||| |||||||||||||||||    
T  33225475 acctatattacagggggtaaagcaccattaaccc 33225442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 1310093 - 1310129
Alignment:
Q  92 tgacctatattacagggga-taaagcaccattaaccc 127  Q
    ||||||||||||||||||| |||||||||||||||||    
T  1310093 tgacctatattacaggggagtaaagcaccattaaccc 1310129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 5832372 - 5832340
Alignment:
Q  94 acctatattacaggggataaagcaccattaacc 126  Q
    ||||||||||||||||||||||||| |||||||    
T  5832372 acctatattacaggggataaagcactattaacc 5832340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 10790356 - 10790391
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||||| ||||||||||||||||||    
T  10790356 tgacctatattacagggg-taaagcaccattaaccca 10790391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 9672932 - 9672893
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaa 131  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  9672932 tgacctatattacagggggtaaagcaccattaacccaaaa 9672893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 28519649 - 28519689
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaata 133  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  28519649 tgacctatattacagggg-taaagcaccattaacccaaaata 28519689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 36518881 - 36518918
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaa 129  Q
    |||||||||||||||||| |||||||||||||||||||    
T  36518881 tgacctatattacagggggtaaagcaccattaacccaa 36518918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 4633989 - 4633953
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||||| ||||||||||||||||||    
T  4633989 tgacctatattacagggggtaaagcaccattaaccca 4633953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 13012470 - 13012434
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||||| ||||||||||||||||||    
T  13012470 tgacctatattacagggggtaaagcaccattaaccca 13012434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 13083880 - 13083844
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||||| ||||||||||||||||||    
T  13083880 tgacctatattacagggggtaaagcaccattaaccca 13083844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 2724519 - 2724484
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  2724519 tgacctatattacagggggtaaagcaccattaaccc 2724484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 10598354 - 10598319
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  10598354 tgacctatattacagggggtaaagcaccattaaccc 10598319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 25963143 - 25963178
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    ||||||||||||||||||||||||||| ||||||||    
T  25963143 tgacctatattacaggggataaagcactattaaccc 25963178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 27433555 - 27433520
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||| |||||||||||||||||||||||||||||||    
T  27433555 tgacatatattacaggggataaagcaccattaaccc 27433520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 28593546 - 28593581
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  28593546 tgacctatattacaggggttaaagcaccattaaccc 28593581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 13012647 - 13012684
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaa 130  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  13012647 tgacctatattacagggg-taaagcaccattaacccaaa 13012684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 1497364 - 1497328
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||||| |||| |||||||||||||    
T  1497364 tgacctatattacagggggtaaatcaccattaaccca 1497328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 5661900 - 5661936
Alignment:
Q  96 ctatattacaggggataaagcaccattaacccaaaat 132  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  5661900 ctatattacagggggtaaagcaccattaaccctaaat 5661936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 13924368 - 13924404
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||| | ||||||||||||||||||    
T  13924368 tgacctatattacaggaggtaaagcaccattaaccca 13924404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 31341261 - 31341226
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    ||||||||||||||||||||||||||||||||||||    
T  31341261 tgacctatattacaggggataaagcaccattaaccc 31341226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 33898108 - 33898069
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaa 131  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  33898108 tgacctatattacagggggtaaagcaccattaacccaaaa 33898069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 40066741 - 40066705
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||||| ||||||||||||||||||    
T  40066741 tgacctatattacagggggtaaagcaccattaaccca 40066705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 1351489 - 1351524
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  1351489 tgacctatattacagggggtaaagcaccattaaccc 1351524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 11761117 - 11761082
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  11761117 tgacctatattacagggggtaaagcaccattaaccc 11761082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 17261060 - 17261025
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  17261060 tgacctatattacagggggtaaagcaccattaaccc 17261025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 19598930 - 19598969
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaa 131  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  19598930 tgacttatattacagggggtaaagcaccattaacccaaaa 19598969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 19756897 - 19756858
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaa 131  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  19756897 tgacctatattatagggggtaaagcaccattaacccaaaa 19756858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 35359507 - 35359472
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  35359507 tgacctatattacagggggtaaagcaccattaaccc 35359472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 35434094 - 35434129
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  35434094 tgacctatattacagggggtaaagcaccattaaccc 35434129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 39846602 - 39846637
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  39846602 tgacctatattacagggggtaaagcaccattaaccc 39846637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 44986763 - 44986798
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    ||||||||||||||||||||||| ||||||||||||    
T  44986763 tgacctatattacaggggataaaacaccattaaccc 44986798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 48418689 - 48418654
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  48418689 tgacctatattacagggggtaaagcaccattaaccc 48418654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 54012610 - 54012645
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  54012610 tgacctatattacagggggtaaagcaccattaaccc 54012645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 54087557 - 54087518
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaa 131  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  54087557 tgacctatattagagggggtaaagcaccattaacccaaaa 54087518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 55090265 - 55090300
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  55090265 tgacctatattacagggggtaaagcaccattaaccc 55090300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 126
Target Start/End: Complemental strand, 9161280 - 9161250
Alignment:
Q  96 ctatattacaggggataaagcaccattaacc 126  Q
    |||||||||||||||||||||||||||||||    
T  9161280 ctatattacaggggataaagcaccattaacc 9161250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Original strand, 29853650 - 29853684
Alignment:
Q  93 gacctatattacaggggataaagcaccattaaccc 127  Q
    ||||||||||||||||| |||||||||||||||||    
T  29853650 gacctatattacagggggtaaagcaccattaaccc 29853684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 16308141 - 16308100
Alignment:
Q  92 tgacctatattacagggga-taaagcaccattaacccaaaat 132  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  16308141 tgacctatattacaggggggtaaagcaccattaacccaaaat 16308100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 33898296 - 33898329
Alignment:
Q  94 acctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||| |||||||||||||||||    
T  33898296 acctatattacagggggtaaagcaccattaaccc 33898329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 46994115 - 46994148
Alignment:
Q  94 acctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||| |||||||||||||||||    
T  46994115 acctatattacagggggtaaagcaccattaaccc 46994148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 3820529 - 3820481
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaataatcaaat 140  Q
    |||||||||||||||||| |||| |||||||||||| ||| ||| ||||    
T  3820529 tgacctatattacagggggtaaaacaccattaaccctaaaaaataaaat 3820481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 29013442 - 29013406
Alignment:
Q  92 tgacctatattacagggg-ataaagcaccattaaccc 127  Q
    |||||||||||||||||| ||||||||||||||||||    
T  29013442 tgacctatattacagggggataaagcaccattaaccc 29013406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 3662608 - 3662569
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaa 131  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  3662608 tgacctatattacaggggataaagcactattaacccaaaa 3662569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 7454924 - 7454885
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaa 131  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  7454924 tgacctatattacagggggtaaagcaccattaacccaaaa 7454885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 35384478 - 35384516
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaa 130  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  35384478 tgacctatattacagggggtaaagcaccattaacccaaa 35384516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 37847793 - 37847829
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||||| ||||||||||||||||||    
T  37847793 tgacctatattacagggggtaaagcaccattaaccca 37847829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 39160554 - 39160590
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||||| ||||||||||||||||||    
T  39160554 tgacctatattacagggggtaaagcaccattaaccca 39160590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 16555360 - 16555325
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  16555360 tgacctatattacagggggtaaagcaccattaaccc 16555325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 26486791 - 26486826
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  26486791 tgacctatattacagggggtaaagcaccattaaccc 26486826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 27142828 - 27142863
Alignment:
Q  94 acctatattacaggggataaagcaccattaacccaa 129  Q
    |||||||||||||||| |||||||||||||||||||    
T  27142828 acctatattacagggggtaaagcaccattaacccaa 27142863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 52413156 - 52413121
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  52413156 tgacctatattacagggggtaaagcaccattaaccc 52413121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 16555551 - 16555592
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaata 133  Q
    |||||||||||||||||  ||||||||||||||||| |||||    
T  16555551 tgacctatattacagggagtaaagcaccattaaccctaaata 16555592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 46583861 - 46583824
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaa 129  Q
    ||||||||||||||| || |||||||||||||||||||    
T  46583861 tgacctatattacagagggtaaagcaccattaacccaa 46583824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 51809789 - 51809752
Alignment:
Q  94 acctatattacaggggataaagcaccattaacccaaaa 131  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  51809789 acctatattacagggggtaaaacaccattaacccaaaa 51809752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 972876 - 972840
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||||| |||| |||||||||||||    
T  972876 tgacctatattacagggggtaaaacaccattaaccca 972840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 23889712 - 23889672
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaat 132  Q
    |||||||||||||||||| ||||||||| ||||||| ||||    
T  23889712 tgacctatattacagggggtaaagcacctttaaccctaaat 23889672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 24465939 - 24465903
Alignment:
Q  92 tgacctatattacaggg-gataaagcaccattaaccc 127  Q
    ||||||||||||||||| |||||||||||||||||||    
T  24465939 tgacctatattacagggtgataaagcaccattaaccc 24465903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 29075587 - 29075623
Alignment:
Q  95 cctatattacaggggataaagcaccattaacccaaaa 131  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  29075587 cctatattacagggggtaaatcaccattaacccaaaa 29075623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 36454505 - 36454541
Alignment:
Q  92 tgacctatattacagg-ggataaagcaccattaaccc 127  Q
    |||||||||||||||| ||||||||||||||||||||    
T  36454505 tgacctatattacaggaggataaagcaccattaaccc 36454541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000008; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 3785560 - 3785518
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaataa 134  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  3785560 tgacctatattacagggggtaaagcaccattaacccaagataa 3785518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 23428771 - 23428729
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaaataa 134  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  23428771 tgacctatattacagggggtaaagcacctttaacccaaaataa 23428729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 39301914 - 39301881
Alignment:
Q  94 acctatattacaggggataaagcaccattaaccc 127  Q
    ||||||||||||||||||||||||||||||||||    
T  39301914 acctatattacaggggataaagcaccattaaccc 39301881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 18367061 - 18367025
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||||| ||||||||||||||||||    
T  18367061 tgacctatattacagggggtaaagcaccattaaccca 18367025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 19158189 - 19158225
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||||| ||||||||||||||||||    
T  19158189 tgacctatattacagggggtaaagcaccattaaccca 19158225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 21692627 - 21692662
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  21692627 tgacctatattacagggggtaaagcaccattaaccc 21692662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 22686778 - 22686743
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  22686778 tgacctatattacagggggtaaagcaccattaaccc 22686743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 23564137 - 23564102
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  23564137 tgacctatattacagggggtaaagcaccattaaccc 23564102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 38687533 - 38687568
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    ||||||||||||||||||||||| ||||||||||||    
T  38687533 tgacctatattacaggggataaaacaccattaaccc 38687568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 41708863 - 41708828
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  41708863 tgacctatattacagggggtaaagcaccattaaccc 41708828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 43383012 - 43383047
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  43383012 tgacctatattacagggggtaaagcaccattaaccc 43383047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 45530537 - 45530502
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  45530537 tgacctatattacagggggtaaagcaccattaaccc 45530502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 126
Target Start/End: Original strand, 3448894 - 3448928
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacc 126  Q
    ||||||||||||||||||||||| |||||||||||    
T  3448894 tgacctatattacaggggataaaacaccattaacc 3448928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 11105806 - 11105768
Alignment:
Q  92 tgacctatattacagggg-ataaagcaccattaacccaa 129  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  11105806 tgacctatattacagggggataaagcaccattaacccaa 11105768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 43889052 - 43889089
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaaa 130  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  43889052 tgacctatattacagggg-taaagcaccattaacccaaa 43889089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 23566148 - 23566184
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaa 129  Q
    |||||||||||||||||| |||||||||||||||||||    
T  23566148 tgacctatattacagggg-taaagcaccattaacccaa 23566184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 125
Target Start/End: Original strand, 12501995 - 12502023
Alignment:
Q  97 tatattacaggggataaagcaccattaac 125  Q
    |||||||||||||||||||||||||||||    
T  12501995 tatattacaggggataaagcaccattaac 12502023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 12523583 - 12523551
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaa 124  Q
    |||||||||||| ||||||||||||||||||||    
T  12523583 tgacctatattataggggataaagcaccattaa 12523551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 15152311 - 15152343
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaa 124  Q
    |||||||||||||||||| ||||||||||||||    
T  15152311 tgacctatattacagggggtaaagcaccattaa 15152343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 34845316 - 34845280
Alignment:
Q  95 cctatattacaggggataaagcaccattaacccaaaa 131  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  34845316 cctatattacaggggctaaagcactattaacccaaaa 34845280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 47973882 - 47973915
Alignment:
Q  94 acctatattacaggggataaagcaccattaaccc 127  Q
    ||||||||||||||||||||||||||||||||||    
T  47973882 acctatattacaggggataaagcaccattaaccc 47973915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 17167808 - 17167843
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    ||||||||||||||||||||||||||| ||||||||    
T  17167808 tgacctatattacaggggataaagcactattaaccc 17167843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 18655411 - 18655376
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  18655411 tgacctatattacagggggtaaagcaccattaaccc 18655376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 28000140 - 28000175
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  28000140 tgacctatattacagggggtaaagcaccattaaccc 28000175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 31417524 - 31417559
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  31417524 tgacctatattacagggggtaaagcaccattaaccc 31417559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 43596534 - 43596569
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  43596534 tgacctatattacagggggtaaagcaccattaaccc 43596569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 44412554 - 44412589
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  44412554 tgacctatattacagggggtaaagcaccattaaccc 44412589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 45639746 - 45639781
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  45639746 tgacctatattacagggggtaaagcaccattaaccc 45639781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 15108123 - 15108090
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaac 125  Q
    |||||||||||||||||| |||||||||||||||    
T  15108123 tgacctatattacagggggtaaagcaccattaac 15108090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 22335540 - 22335581
Alignment:
Q  92 tgacctatattacagggga-taaagcaccattaacccaaaat 132  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  22335540 tgacctatattacaggggggtaaagcaccattaacccaaaat 22335581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 35158218 - 35158181
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaacccaa 129  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  35158218 tgacctatattacaggggataaaacactattaacccaa 35158181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 128
Target Start/End: Complemental strand, 1263816 - 1263784
Alignment:
Q  96 ctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||| ||||||||||||||||||    
T  1263816 ctatattacagggggtaaagcaccattaaccca 1263784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 5031957 - 5031921
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  5031957 tgacatatattacagggggtaaagcaccattaaccca 5031921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 13701984 - 13702020
Alignment:
Q  92 tgacctatattacagggg-ataaagcaccattaaccc 127  Q
    |||||||||||||||||| ||||||||||||||||||    
T  13701984 tgacctatattacaggggaataaagcaccattaaccc 13702020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 24374523 - 24374559
Alignment:
Q  92 tgacctatattacagggg-ataaagcaccattaaccc 127  Q
    |||||||||||||||||| ||||||||||||||||||    
T  24374523 tgacctatattacagggggataaagcaccattaaccc 24374559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 45633720 - 45633756
Alignment:
Q  92 tgacctatattaca-ggggataaagcaccattaaccc 127  Q
    |||||||||||||| ||||||||||||||||||||||    
T  45633720 tgacctatattacatggggataaagcaccattaaccc 45633756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 48848162 - 48848198
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  48848162 tgacctatattatagggggtaaagcaccattaaccca 48848198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 14469 - 14504
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  14469 tgacctatattacagggggtaaagcaccattaaccc 14504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 29899 - 29934
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||| |||||||||||||||||    
T  29899 tgacctatattacagggggtaaagcaccattaaccc 29934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 127
Target Start/End: Complemental strand, 71682 - 71652
Alignment:
Q  97 tatattacaggggataaagcaccattaaccc 127  Q
    |||||||||||||||||||||||||||||||    
T  71682 tatattacaggggataaagcaccattaaccc 71652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1797 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1797
Description:

Target: scaffold1797; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 508 - 472
Alignment:
Q  92 tgacctatattacagggg-ataaagcaccattaaccc 127  Q
    |||||||||||||||||| ||||||||||||||||||    
T  508 tgacctatattacagggggataaagcaccattaaccc 472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 4323 - 4358
Alignment:
Q  92 tgacctatattacaggggataaagcaccattaaccca 128  Q
    |||||||||||||||||| ||||||||||||||||||    
T  4323 tgacctatattacagggg-taaagcaccattaaccca 4358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 2792 - 2752
Alignment:
Q  92 tgacctatattacagggga-taaagcaccattaacccaaaa 131  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  2792 tgacctatattacaggggggtaaagcaccattaacccaaaa 2752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 145570 - 145606
Alignment:
Q  92 tgacctatattacagggg-ataaagcaccattaaccc 127  Q
    |||||||||||||||||| ||||||||||||||||||    
T  145570 tgacctatattacagggggataaagcaccattaaccc 145606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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