View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10441_low_60 (Length: 233)
Name: NF10441_low_60
Description: NF10441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10441_low_60 |
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Alignment Details
Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 24952459 - 24952633
Alignment:
| Q |
1 |
aatctactttgttacatatacaaatcttccctgccgcatagtatacaataaatgttgtgtcggcggctcaaaaacccttgttatataacactacaggaat |
100 |
Q |
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| T |
24952459 |
aatctaccttgttacatatataaatcttccctgccgcatagtatacaataaatgttgtgtcggcggctcaaaaacccttgttatataacactacaggaat |
24952558 |
T |
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| Q |
101 |
ctgattccatatttgagccaaatacagnnnnnnnnnnnnnccatcgtttgcttcgcaaagttttatgcgctttat |
175 |
Q |
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||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||| |
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| T |
24952559 |
ctgattccatatttgagccaaatacagaaaaagtgaaaaaccatcgtttacttcgcaaagttttatgcactttat |
24952633 |
T |
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