View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10442_low_5 (Length: 256)
Name: NF10442_low_5
Description: NF10442
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10442_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 49125920 - 49125684
Alignment:
| Q |
1 |
tccatgtaaattatatttaaaccaaatcattgccttgttttctacaagtaacagaaaatgtaataaatgtggcaacaagtacacatttcaaaggaagcag |
100 |
Q |
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| T |
49125920 |
tccatgtaaattatatttaaaccaaatcattgccttgttttctacgggtaacagaaaatgtaataaatgtggcaacaagtacaaatttcaaaggaagcag |
49125821 |
T |
|
| Q |
101 |
atgatgtgaacttacacaattgaaaatatggggagctccaggtcctgcatattgaattgaaattgaaataaagaacatgtccaacctttatttaaatatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
49125820 |
atgatgtgaacttacacaattgaaaatatggggagctccaggtcctgcatattgaattgaaattgaaataaagaacatgtccaacc-ttatttaaatatt |
49125722 |
T |
|
| Q |
201 |
aaaatgtagtaaatagaatgcaagatggtaccaatttc |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
49125721 |
aaaatgtagtaaatagaatgcaagatggtaccaatttc |
49125684 |
T |
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