View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10443_low_4 (Length: 509)
Name: NF10443_low_4
Description: NF10443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10443_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 441; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 22 - 482
Target Start/End: Complemental strand, 35666373 - 35665913
Alignment:
| Q |
22 |
gtaatggccaagaataatcaatctgtaatgtatttggtgtaatacccattgagcagttcatcatattcatatccaccccataaggattatattcagatac |
121 |
Q |
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| T |
35666373 |
gtaatggccaagaataatcaatctgtaatgtatttggtgtaataccaattgagcagttcatcatattcatatccaccccataaggattatattcagatac |
35666274 |
T |
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| Q |
122 |
taattggttctgaacccaaaacgaagactttgactcttcactactacatgaagatttgttttcattttccattaccatgatgctattatcaataggagcg |
221 |
Q |
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| T |
35666273 |
taattggttctgaacccaaaacaaagactttgactcttcactactacatgaagatttgttttcattttccattaccatgatgctattatcaataggagca |
35666174 |
T |
|
| Q |
222 |
ccttgtaaagaggaactcatcaaagtgcactgatttttactttgacttagatttgagatggatttacgatgaagtaggtttttcagtttgagagatattg |
321 |
Q |
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| T |
35666173 |
ccttgtaaagaggaactcatcaaagtgcactgatttttactttgacttagatttgagatggatttacgatgaagtaggtttttcagtttgagagatattg |
35666074 |
T |
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| Q |
322 |
gagaattggtagggatggaatgagtagtagagaaattggtgcgagtgtttgtacctctaaggagaaaagcagcttcatcgtaagctcgagcagcttcctc |
421 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35666073 |
gagaattggtagggatggaatgagtagtagagaaattggtacgagtatttgtacctctaaggagaaaagcagcttcatcgtaagctcgagcagcttcctc |
35665974 |
T |
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| Q |
422 |
agcagttttataggtaccaagccacatcctaatgttctttgatgtgtcttttatctctgct |
482 |
Q |
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| T |
35665973 |
agcagttttataggtaccaagccacatcctaatgttctttgatgtgtcttttatctctgct |
35665913 |
T |
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