View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10444_low_12 (Length: 355)
Name: NF10444_low_12
Description: NF10444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10444_low_12 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 2 - 355
Target Start/End: Original strand, 33836003 - 33836356
Alignment:
| Q |
2 |
aggatggagtatacagtgatagatgcaaacgtatatatattaagattgagtacaaaaatggatgtatgtgcaaattacaaccacatgcattatcaacatt |
101 |
Q |
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| T |
33836003 |
aggatggagtatacagtgatagatgcaaacgtatatatattaagattgagtacaaaaatggatgtatgtgcaaattacaaccacatgcattatcaacatt |
33836102 |
T |
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| Q |
102 |
acacattaatattagttttgtttaatattttcagaattaatagctcacatgttacgaagttgactagaatttcttgaagtaagcaagatccaaccgcgtt |
201 |
Q |
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| T |
33836103 |
acacattaatattagttttgtttaatattttcaaaattaatagctcacatgttacgaagttgactagaatttcttgaagtaagcaagatccaaccgcgtt |
33836202 |
T |
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| Q |
202 |
acttatnnnnnnnttaatattaacatggactttgttatatcatggattgcttaagatttagtataaggttattcaaataattttaatttgtgaaaatgtg |
301 |
Q |
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| T |
33836203 |
acttataaaaaaattaatattaacatggactttgttatatcatggattgcttaagatttagtataaggttattcaaataattttaatttgtgaaaatgtg |
33836302 |
T |
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| Q |
302 |
aactaaaaaatgagtcggtgttggcgcgaaaagaaggagaaggagggagttgag |
355 |
Q |
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| T |
33836303 |
aactaaaagatgagtcggtgttggcgcgaaaagaaggagaaggagggagttgag |
33836356 |
T |
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