View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10444_low_22 (Length: 238)
Name: NF10444_low_22
Description: NF10444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10444_low_22 |
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Alignment Details
Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 19 - 222
Target Start/End: Original strand, 20630392 - 20630595
Alignment:
| Q |
19 |
ttagcttgatcaatatagttatgattctttggatgttggtgtcaccttcaagatttctataagtgattaactatatatgatgttgttgtgtttgtaaaat |
118 |
Q |
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| T |
20630392 |
ttagcttgatcaatatagttatgattctttggatgttggtgtcaccttcaagatttctataagtgattaactatatatgatgttgttgtgtttgtaaaat |
20630491 |
T |
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| Q |
119 |
cacaatgtttgtacataataaagttttataagaaatgtaaaaggaatgaaattatgagtggttatatatgtgggtcattggttagttgaggacacgtggt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20630492 |
cacaatgtttgtacataataaagttttataagaaatgtaaaaggaatgaaattatgagtggttatatatgtgggtcattggttagttgaggacacgtggt |
20630591 |
T |
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| Q |
219 |
tcat |
222 |
Q |
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|||| |
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| T |
20630592 |
tcat |
20630595 |
T |
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