View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10444_low_7 (Length: 382)
Name: NF10444_low_7
Description: NF10444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10444_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 1 - 372
Target Start/End: Complemental strand, 38096852 - 38096486
Alignment:
| Q |
1 |
ttaacttcacctcatccatccctagcctgcttctcctgtaagaaaacaaaaggtaacaaattaaacaacaaataaaagaaattctataagtaattaatga |
100 |
Q |
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| T |
38096852 |
ttaacttcacctcatccatccctagcctgcttctcctgtaagaaaacaaaaggtaacat-ttaaacaacaaataaaagaaattctaaaagtaat----ga |
38096758 |
T |
|
| Q |
101 |
gaaacgtacctttcttcattataggaattagatttcttgagcacaggttcagcttgaaaagcaacccggtttgctttcatggattccacaatactcccac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38096757 |
gaaacgtacctttcttcattataggaattagatttcttgagcacaggttcagcttgaaaagcaacccggtttgctttcatggattccacaatactcccac |
38096658 |
T |
|
| Q |
201 |
taaagtattccttctcttcactctgcaaattccccatcaaccttggattctccgttacacatatatcttcatcaccagaatacactttctcttcatcaac |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38096657 |
taaagtattccttctcttcactctgcaaattccccatcaaccttggattctccgttacacatatatcttcatcaccagaatacactttctcttcatcaac |
38096558 |
T |
|
| Q |
301 |
actctcccttcttttgcttgtggtccccacattgctcagcctcccttcctgctgctttgctttcatctctgc |
372 |
Q |
| |
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|||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38096557 |
actctcccttctcttgcttgttgtccccacattgctcagcctcccttcctgctgctttgctttcatctctgc |
38096486 |
T |
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