View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10446_high_1 (Length: 793)

Name: NF10446_high_1
Description: NF10446
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10446_high_1
NF10446_high_1
[»] chr8 (27 HSPs)
chr8 (12-408)||(32066292-32066688)
chr8 (19-408)||(37986862-37987252)
chr8 (12-408)||(24995392-24995785)
chr8 (12-323)||(9519272-9519583)
chr8 (13-408)||(36630525-36630920)
chr8 (517-775)||(32066811-32067066)
chr8 (12-303)||(34389002-34389293)
chr8 (144-329)||(31210319-31210505)
chr8 (26-148)||(31207373-31207494)
chr8 (27-224)||(10248565-10248761)
chr8 (13-244)||(15821377-15821606)
chr8 (27-224)||(17657014-17657209)
chr8 (20-128)||(16457466-16457572)
chr8 (345-408)||(34389308-34389371)
chr8 (326-408)||(34866350-34866432)
chr8 (27-134)||(30236140-30236247)
chr8 (12-89)||(41893398-41893474)
chr8 (12-113)||(12898271-12898372)
chr8 (27-85)||(15906697-15906755)
chr8 (12-74)||(20138448-20138510)
chr8 (43-112)||(10552253-10552321)
chr8 (27-79)||(32945715-32945767)
chr8 (33-85)||(33967337-33967389)
chr8 (27-85)||(12198081-12198139)
chr8 (27-85)||(12442509-12442567)
chr8 (47-85)||(40531243-40531281)
chr8 (43-120)||(35062433-35062510)
[»] chr5 (21 HSPs)
chr5 (12-408)||(698049-698445)
chr5 (18-394)||(18592945-18593321)
chr5 (12-315)||(34377880-34378182)
chr5 (13-213)||(29087364-29087564)
chr5 (36-190)||(7392052-7392205)
chr5 (27-224)||(13954246-13954441)
chr5 (27-224)||(7195251-7195447)
chr5 (27-218)||(8297347-8297537)
chr5 (309-398)||(29087246-29087335)
chr5 (36-184)||(33258903-33259050)
chr5 (46-391)||(26045995-26046340)
chr5 (37-168)||(25991936-25992066)
chr5 (36-190)||(14302451-14302604)
chr5 (22-134)||(24072273-24072385)
chr5 (36-134)||(39184208-39184306)
chr5 (44-131)||(17854096-17854183)
chr5 (43-134)||(31721639-31721730)
chr5 (31-81)||(21402853-21402903)
chr5 (27-85)||(22675336-22675394)
chr5 (43-81)||(12046270-12046308)
chr5 (27-85)||(27713080-27713138)
[»] chr1 (31 HSPs)
chr1 (12-408)||(46692816-46693212)
chr1 (12-408)||(31585757-31586154)
chr1 (12-408)||(30685901-30686297)
chr1 (18-408)||(24449933-24450325)
chr1 (12-303)||(41920246-41920536)
chr1 (18-408)||(20113524-20113914)
chr1 (13-405)||(24684476-24684866)
chr1 (12-298)||(5389418-5389704)
chr1 (13-390)||(7857357-7857736)
chr1 (12-407)||(24658616-24659013)
chr1 (20-394)||(46814472-46814845)
chr1 (12-124)||(5459133-5459245)
chr1 (36-190)||(9313310-9313463)
chr1 (27-244)||(32864573-32864791)
chr1 (21-133)||(27031846-27031958)
chr1 (27-234)||(17033449-17033655)
chr1 (36-244)||(38544759-38544965)
chr1 (348-408)||(41920168-41920228)
chr1 (27-133)||(19598599-19598705)
chr1 (27-144)||(27102142-27102260)
chr1 (43-134)||(4651742-4651833)
chr1 (27-234)||(50589219-50589423)
chr1 (43-190)||(34774779-34774923)
chr1 (44-118)||(6583245-6583319)
chr1 (27-188)||(16147464-16147624)
chr1 (43-134)||(42374125-42374216)
chr1 (347-408)||(16147256-16147317)
chr1 (43-85)||(15840940-15840982)
chr1 (176-224)||(10785492-10785540)
chr1 (158-224)||(6583333-6583399)
chr1 (43-85)||(30655571-30655613)
[»] chr2 (24 HSPs)
chr2 (12-408)||(39338862-39339258)
chr2 (12-376)||(10523817-10524185)
chr2 (13-244)||(7874145-7874374)
chr2 (38-408)||(17105099-17105470)
chr2 (37-226)||(14106546-14106734)
chr2 (27-206)||(1269373-1269552)
chr2 (19-142)||(387128-387250)
chr2 (13-133)||(14405162-14405281)
chr2 (27-144)||(13337226-13337343)
chr2 (58-224)||(37770684-37770849)
chr2 (56-224)||(41086829-41086994)
chr2 (27-85)||(22885145-22885203)
chr2 (27-84)||(2062901-2062958)
chr2 (13-134)||(4471886-4472006)
chr2 (43-134)||(31902442-31902533)
chr2 (35-85)||(4162040-4162090)
chr2 (27-188)||(10173590-10173751)
chr2 (27-85)||(16959993-16960051)
chr2 (44-117)||(23650364-23650437)
chr2 (31-134)||(15126426-15126529)
chr2 (36-85)||(33788653-33788702)
chr2 (21-85)||(5254267-5254331)
chr2 (27-74)||(7695985-7696032)
chr2 (27-85)||(36276184-36276241)
[»] chr7 (35 HSPs)
chr7 (12-408)||(47325882-47326278)
chr7 (12-408)||(10243875-10244266)
chr7 (7-408)||(3419648-3420050)
chr7 (12-408)||(38305949-38306345)
chr7 (12-408)||(37794689-37795073)
chr7 (44-408)||(25160504-25160867)
chr7 (12-291)||(5860285-5860564)
chr7 (27-408)||(33434796-33435178)
chr7 (13-291)||(3866922-3867199)
chr7 (19-185)||(41089752-41089918)
chr7 (13-244)||(34389815-34390045)
chr7 (27-243)||(6716748-6716963)
chr7 (43-372)||(8744877-8745206)
chr7 (44-389)||(42533281-42533627)
chr7 (13-221)||(35745825-35746031)
chr7 (13-128)||(6584877-6584992)
chr7 (59-238)||(44755486-44755663)
chr7 (27-190)||(1320701-1320863)
chr7 (27-174)||(24324810-24324956)
chr7 (27-387)||(16954363-16954722)
chr7 (27-143)||(16828948-16829064)
chr7 (43-134)||(11379155-11379246)
chr7 (12-190)||(3478259-3478436)
chr7 (27-234)||(13311701-13311908)
chr7 (43-134)||(38485518-38485609)
chr7 (43-134)||(46133306-46133397)
chr7 (44-130)||(23983162-23983247)
chr7 (44-85)||(9349760-9349801)
chr7 (32-84)||(17802833-17802885)
chr7 (27-81)||(12480901-12480955)
chr7 (12-74)||(44353561-44353623)
chr7 (47-85)||(46262151-46262189)
chr7 (38-96)||(9428128-9428186)
chr7 (47-85)||(27993568-27993606)
chr7 (47-85)||(35206725-35206763)
[»] chr4 (31 HSPs)
chr4 (18-405)||(30964132-30964519)
chr4 (12-408)||(8254715-8255111)
chr4 (12-408)||(8268133-8268529)
chr4 (20-408)||(4305413-4305801)
chr4 (18-188)||(30167567-30167736)
chr4 (27-224)||(22811172-22811367)
chr4 (27-224)||(25753045-25753241)
chr4 (27-207)||(53823433-53823612)
chr4 (44-190)||(39421042-39421187)
chr4 (36-407)||(31050683-31051053)
chr4 (13-190)||(2825691-2825866)
chr4 (27-207)||(19815236-19815415)
chr4 (18-408)||(19672790-19673178)
chr4 (27-134)||(46698797-46698904)
chr4 (36-134)||(2061759-2061857)
chr4 (43-144)||(48098285-48098386)
chr4 (27-132)||(21387216-21387321)
chr4 (26-85)||(36962627-36962685)
chr4 (37-144)||(49747480-49747586)
chr4 (27-204)||(6599957-6600134)
chr4 (44-134)||(38637261-38637350)
chr4 (27-133)||(38929790-38929896)
chr4 (36-81)||(16501746-16501791)
chr4 (13-68)||(35341336-35341391)
chr4 (26-85)||(39041285-39041344)
chr4 (47-85)||(40813813-40813851)
chr4 (43-134)||(19311371-19311460)
chr4 (35-134)||(35800452-35800550)
chr4 (50-85)||(53756767-53756802)
chr4 (27-85)||(2792286-2792344)
chr4 (56-85)||(37707396-37707425)
[»] chr3 (32 HSPs)
chr3 (11-408)||(20611471-20611868)
chr3 (12-408)||(34475751-34476146)
chr3 (13-408)||(19176191-19176585)
chr3 (83-408)||(47235403-47235729)
chr3 (12-408)||(45163536-45163939)
chr3 (18-408)||(2394256-2394651)
chr3 (12-294)||(2392503-2392785)
chr3 (19-236)||(23328354-23328567)
chr3 (36-224)||(14755286-14755471)
chr3 (13-244)||(40023570-40023799)
chr3 (46-224)||(25647557-25647734)
chr3 (36-190)||(37123289-37123442)
chr3 (12-88)||(17550965-17551041)
chr3 (92-213)||(4464013-4464132)
chr3 (19-99)||(43012372-43012452)
chr3 (13-135)||(9584051-9584173)
chr3 (27-190)||(14193846-14194009)
chr3 (13-113)||(45398779-45398879)
chr3 (43-207)||(823463-823626)
chr3 (12-112)||(31482868-31482968)
chr3 (45-116)||(14879415-14879486)
chr3 (27-134)||(5556532-5556639)
chr3 (27-133)||(47945668-47945775)
chr3 (27-85)||(30127273-30127332)
chr3 (47-85)||(20710740-20710778)
chr3 (43-85)||(24099355-24099397)
chr3 (36-85)||(33143970-33144019)
chr3 (36-81)||(39021297-39021342)
chr3 (46-134)||(30935421-30935509)
chr3 (27-85)||(19295877-19295935)
chr3 (345-391)||(37123095-37123141)
chr3 (28-85)||(31424247-31424304)
[»] chr6 (15 HSPs)
chr6 (12-370)||(3117219-3117577)
chr6 (18-408)||(16510304-16510686)
chr6 (27-224)||(20701815-20702011)
chr6 (56-224)||(3880624-3880791)
chr6 (27-233)||(32935351-32935556)
chr6 (77-226)||(15132585-15132732)
chr6 (36-207)||(9223932-9224101)
chr6 (38-85)||(26216042-26216089)
chr6 (38-140)||(26534742-26534842)
chr6 (27-134)||(33968625-33968732)
chr6 (30-81)||(34105428-34105479)
chr6 (46-141)||(21266070-21266163)
chr6 (38-139)||(12794071-12794173)
chr6 (43-85)||(34090374-34090416)
chr6 (27-80)||(13423482-13423535)
[»] scaffold0068 (1 HSPs)
scaffold0068 (13-408)||(35770-36165)
[»] scaffold0050 (1 HSPs)
scaffold0050 (30-224)||(36580-36773)
[»] scaffold0200 (1 HSPs)
scaffold0200 (27-206)||(19273-19452)
[»] scaffold0119 (1 HSPs)
scaffold0119 (27-206)||(42150-42329)
[»] scaffold0063 (1 HSPs)
scaffold0063 (44-204)||(58020-58179)
[»] scaffold1613 (1 HSPs)
scaffold1613 (36-244)||(1038-1244)
[»] scaffold0620 (1 HSPs)
scaffold0620 (30-85)||(3841-3896)


Alignment Details
Target: chr8 (Bit Score: 337; Significance: 0; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 12 - 408
Target Start/End: Original strand, 32066292 - 32066688
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32066292 caaagcccaaaaaccaactggagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 32066391  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  32066392 tcgcccccggtacactagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcaaagccaaatgaaccggcccaccgaa 32066491  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||    
T  32066492 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacatgacacacatcctc 32066591  T
Q  312 caaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32066592 caaactttgtaaatacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccatgtaacagaggttgcttctaaaggaaat 32066688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 19 - 408
Target Start/End: Original strand, 37986862 - 37987252
Alignment:
Q  19 caaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccct 118  Q
    |||||| |||||||||||||||| |||||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||| |||     
T  37986862 caaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaaatgattggcccaccagactataacaccaaattagcagggcacccctcgcccc 37986961  T
Q  119 cggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagc 218  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||    
T  37986962 cggtacaccagagaaaaaccaaatcaagtcaaataaagaatgcaactagaccccgactaccgatctcgaagccaaatgaaccggcccaccgaaaaccagc 37987061  T
Q  219 acacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctc-aacacaacgtgacacacaatctccaaact 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  |||| ||||    
T  37987062 acacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaaacacaacgtgacacgcaccctcctaact 37987161  T
Q  318 ccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||    
T  37987162 ccgtaaacacctaaaccacccgaaaaacacaaacaagagctagtgacgacgaacatgtacccatgtaacaaaagttgcttctaaaggaaat 37987252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 12 - 408
Target Start/End: Original strand, 24995392 - 24995785
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  24995392 caaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcaagacacccc 24995491  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||    
T  24995492 tcgcccccagtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaa 24995591  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||  ||   ||    
T  24995592 aaccagcacacaatatgtaagacgaaaaacatagcatacgaagtttaaacaacaaataaatcaaaaggaaaatgctcaacacaatgtgacaaccaccgtc 24995691  T
Q  312 caaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||||||||||||||||||||||| || ||||| |||||||||||||||||||   |||| |||||||||||||||||||||||||||| ||||    
T  24995692 caaactccgtaaacacctaaaccacccaaaaagcactaacaagagctagtgacgac---catggacccgtgtaacagaggttgcttctaaagaaaat 24995785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 12 - 323
Target Start/End: Complemental strand, 9519583 - 9519272
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| |||||||||||||||| |||||||||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  9519583 caaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaactgatcggcccactagactatagtaccaaattagcagggcacccc 9519484  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || |||    
T  9519483 tcacccccggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctactgaa 9519384  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||| ||||| ||||    
T  9519383 aaccagcacacaatatgtaagacgaaagaaatggcatgcgaagtttaaacaacaaacaaataaaaaggaaaaggctcaacacaacgtgatacacactctc 9519284  T
Q  312 caaactccgtaa 323  Q
    ||||||||||||    
T  9519283 caaactccgtaa 9519272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 13 - 408
Target Start/End: Complemental strand, 36630920 - 36630525
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| |||||||  |||| |||||||||| ||||| |||||| |||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  36630920 aaagcccaaaaacaaactagagtcaaagaactgacacccgatctcgaattaaaagtgatcggcccaccagactttagaaccaaattagcagggcacccct 36630821  T
Q  113 caccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaa 212  Q
    | ||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||||||||||| || ||||    
T  36630820 cgcccccggtacaccaaagaaaaaccaaatcaagtcaaacaaagattgcagctagacctcgtctcccgatctcgaagccaaatgaaccggcctaccgaaa 36630721  T
Q  213 accagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctcc 312  Q
    |||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||| || ||||||| |||||||||   ||||| ||  ||||    
T  36630720 accaacacacaatatgtaagacgaaagacatggcatgcgaagtttaaccaacaaacaaatcacaaggaaaaggttcaacacaaaaggacacgcaccctcc 36630621  T
Q  313 aaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    |||||||||| || |||||||||||| ||  ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||    
T  36630620 aaactccgtagactcctaaaccacccaaaaggcacaaacaagagctagtgacgacgaacaaggacccgtgtaacagaggttgcttccaaaggaaat 36630525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 517 - 775
Target Start/End: Original strand, 32066811 - 32067066
Alignment:
Q  517 atatgtagattttaccgagaactctcctccctcctccggttttcaccccatgaatcttccaccaccctccctctaaacccatttatagtggcctaaaggc 616  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||     
T  32066811 atatgtagattttaccgagaactctcctccctcctccggttttcaccccacgaatcttccaccaccctccctctaaacccatttatagtggccaaaaggt 32066910  T
Q  617 tatcaatttgctccccctcccacacaaacggtaatcttctccaaagagtagtctctacgcaccccctcccaatcaatggtatgtaatcattatattttat 716  Q
    | ||||||||||||||||||||||||||||||||||||||||||||   |||||| || |||||||||||||||||||||||||||||||||||||||||    
T  32066911 tttcaatttgctccccctcccacacaaacggtaatcttctccaaag---agtctcgacacaccccctcccaatcaatggtatgtaatcattatattttat 32067007  T
Q  717 gttctctatttaatctcttcaaaatagtaaagtttaatatagaatttaaagttgatttg 775  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32067008 gttctctatttaatcttttcaaaatagtaaagtttaatatagaatttaaagttgatttg 32067066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 12 - 303
Target Start/End: Original strand, 34389002 - 34389293
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| |||||||||||||||| |||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34389002 caaagcccaaaaaccaacttgagtcaaagaactgactcttgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccc 34389101  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || |||  |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| |  |||    
T  34389102 tcgcccctggtacaccagagaaaaaccaaatcaagtcaaacaaaaattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctatcgaa 34389201  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacac 303  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  34389202 aaccagcacacaatatgtaagacgaaagacatggcatgtgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacac 34389293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 144 - 329
Target Start/End: Original strand, 31210319 - 31210505
Alignment:
Q  144 aagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaa-tatgtaagacgaaagaca 242  Q
    ||||||||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  31210319 aagtcaaacaaagattgcagctagaccctgactcccgatcttgaagccaaatgaaccggcccaccgaaaaccagcgcacaaatatgtaagacgaaagaca 31210418  T
Q  243 tggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctccaaactccgtaaacacct 329  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||  |||| ||||||||||||||||    
T  31210419 tggcatgcgaagtttgaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccctccgaactccgtaaacacct 31210505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 31207373 - 31207494
Alignment:
Q  26 caacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtaca 125  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||  ||||||    
T  31207373 caacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggca-ccctcgcccctggtaca 31207471  T
Q  126 ccagagaaaaaccaaatcaagtc 148  Q
    |||||||||||||||||||||||    
T  31207472 ccagagaaaaaccaaatcaagtc 31207494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 27 - 224
Target Start/End: Original strand, 10248565 - 10248761
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| |||||||||||| | ||||||||||||||||| |||||| | | ||| || ||||||| ||| |||||||||||| ||||||||    
T  10248565 aacttgagccaaagaactgactcccgatcttgaatcaaaagtgatcggtccaccaaattttaggacaaaattagaaggacacccctcacccccggtacac 10248664  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaa 224  Q
    |||||||| ||||||||||| |||||||| |||||| |||||| |||| ||||||||||||||| |||  ||| ||||||| | |||||| |||||||    
T  10248665 cagagaaacaccaaatcaagccaaacaaa-attgcagctagacaccgactcccgatctcgaagcaaaagtaactggcccaccggaaaccaccacacaa 10248761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 13 - 244
Target Start/End: Original strand, 15821377 - 15821606
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| ||||||| |||| | |||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||| ||||||||||||||    
T  15821377 aaagcccaaaaaccaacataagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccagactttagaaccaaatcagcagggcacccct 15821476  T
Q  113 caccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaa 212  Q
    | ||||||||||||||||| || |||| |||||| ||||| | ||||| | |||| | || | | |||||||| |||  |||  || ||||||||   |     
T  15821477 cgccctcggtacaccagag-aacaccatatcaagccaaac-aggattgtagctaggcaccaacttccgatctcaaagaaaaaataatcggcccaccagat 15821574  T
Q  213 accagcacacaatatgtaagacgaaagacatg 244  Q
    |||| ||||||||||||||||||| |||||||    
T  15821575 accaacacacaatatgtaagacgatagacatg 15821606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 27 - 224
Target Start/End: Original strand, 17657014 - 17657209
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| |||||||||||| |||||||||||||||||| ||||||| ||| |||  |||| |||| ||||||||||||| || |||||||     
T  17657014 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgacccaccatactttaggtccaacttagaagggcacccctcatcc-cggtacat 17657112  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaa 224  Q
    |||||||| ||||||||| | ||||  ||||||| | |||| | |||| ||||||||||||||| |||| ||||||||||  | |||||| |||||||    
T  17657113 cagagaaacaccaaatcacgccaaa-taagattgtagctagccaccgactcccgatctcgaagcaaaattaaccggcccatcggaaaccaacacacaa 17657209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 16457466 - 16457572
Alignment:
Q  20 aaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctc 119  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| |||||| ||||||| | |||||||||||| |||||||| ||||     
T  16457466 aaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgg-ccaccaaactatagtatcaaattagcaggacacccctcgccct- 16457563  T
Q  120 ggtacacca 128  Q
    |||||||||    
T  16457564 ggtacacca 16457572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 345 - 408
Target Start/End: Original strand, 34389308 - 34389371
Alignment:
Q  345 cacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34389308 cacaaacaagagctagtgacgacgaacatggacccgtgtaacagaggttgcttctaaaggaaat 34389371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 326 - 408
Target Start/End: Original strand, 34866350 - 34866432
Alignment:
Q  326 acctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||||||| | || || |||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  34866350 acctaaaccacgcaaaaaggacaaccaagagctattgacgacgaacatgaacccgtgtaacagaggttgcttctaaaggaaat 34866432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 30236140 - 30236247
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||  |||||| |||||||||||| |||||||||||| ||||| |||||||||||  |  ||||||| || ||||||||||| |||| |||| |||    
T  30236140 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagacttcaaaaccaaatcagaagggcaccccttacccccggtccac 30236239  T
Q  127 cagagaaa 134  Q
    ||||||||    
T  30236240 cagagaaa 30236247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 41893398 - 41893474
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatag 89  Q
    ||||| ||||||| ||||||||| |||||| |||||||||||| |||||||||||||| | |||||||||||||||||    
T  41893398 caaagcccaaaaa-caacttgagacaaagaactgactcccgatctcgaatcaaaagtggttggcccaccagactatag 41893474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 12898271 - 12898372
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| || |||| |||||||||| | | | |||||||| ||| |||||||||||||||||||  ||||||||||||  |||||||||  ||||||||||    
T  12898271 caaagccccaaaaccaacttgagttagataactgactccggatctcgaatcaaaagtgatcgggtcaccagactatattaccaaattaatagggcacccc 12898370  T
Q  112 tc 113  Q
    ||    
T  12898371 tc 12898372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 15906755 - 15906697
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||  |||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  15906755 aacttgaaccaaagaactgactcccgatctcgaatcaaatgtgatcggcccaccagact 15906697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 20138510 - 20138448
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcgg 74  Q
    ||||| ||||||| |||| | ||||||||| |||||||||||| || ||||||||||||||||    
T  20138510 caaagcccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 20138448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 10552321 - 10552253
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||||||||||| | |||||||||| |||||||||||||||||  || ||||||| || |||||||||||    
T  10552321 ctgactcccgatctagaatcaaaagcgatcggcccaccagacttcagaaccaaatcag-agggcacccct 10552253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 32945715 - 32945767
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccac 79  Q
    ||||||| |||||||  ||||||||||| ||||||||||||||||| ||||||    
T  32945715 aacttgaatcaaagaattgactcccgatctcgaatcaaaagtgatcagcccac 32945767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 33967389 - 33967337
Alignment:
Q  33 agtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    ||||||| || || |||| ||| ||||||||||||||||||||||||||||||    
T  33967389 agtcaaaaagttggctcctgatctcgaatcaaaagtgatcggcccaccagact 33967337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 12198081 - 12198139
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||| |||||| ||||||||| ||||  ||| |||||||||||| ||||||||||    
T  12198081 aacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagact 12198139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 12442509 - 12442567
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||| |||||| ||||||||| ||||  ||| |||||||||||| ||||||||||    
T  12442509 aacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagact 12442567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 40531281 - 40531243
Alignment:
Q  47 ctcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  40531281 ctcccgatctcgaatcaaaagtgatcggcccatcagact 40531243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 35062510 - 35062433
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcg 120  Q
    ||||||| |||| |||||||||||  |||||||||||||||||  || ||||||| ||   ||||||||| |||||||    
T  35062510 ctgactctcgatctcgaatcaaaatcgatcggcccaccagacttcagaaccaaatcagagaggcaccccttaccctcg 35062433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 301; Significance: 1e-169; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 12 - 408
Target Start/End: Complemental strand, 698445 - 698049
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  698445 caaagcccaaaaaccaacttgagtcaaagagttgactcccgatctcgaatcaaaagagatcggtccaccagactatagcaccaaattagcagggcacccc 698346  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||  ||    
T  698345 tcgcccccggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccctgactcccgatctcgaagccaaatgaaccggcccactaaa 698246  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||  |||    
T  698245 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacatatcaaaaagaaaaggctcaacataacgtgacacacaccctc 698146  T
Q  312 caaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||  |||||||| |  |||||||||||| ||||    
T  698145 caaactccgtaaacacctaaaacacccgaagagcacaaacaagagctagtaacgacgaacatgtacatgtgtaacaaattttgcttctaaagaaaat 698049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 18 - 394
Target Start/End: Complemental strand, 18593321 - 18592945
Alignment:
Q  18 ccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccc 117  Q
    ||||||| |||||||||||||||| || ||||||||| ||||||||||||||||| |||||| | ||||||||||||||||||||||||| ||||| |||    
T  18593321 ccaaaaaccaacttgagtcaaagaactaactcccgatctcgaatcaaaagtgatctgcccactaaactatagcaccaaattagcagggcatccctcgccc 18593222  T
Q  118 tcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccag 217  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||    
T  18593221 ccggtacacgagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaatcag 18593122  T
Q  218 cacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctccaaact 317  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||  |||||||||    
T  18593121 cacacaatatgtaaaacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacataacgtgacatgcaccctccaaact 18593022  T
Q  318 ccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttg 394  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18593021 ccgtaaacacctaaaccacctgaagagcacaaacaagagctagtgacgacgaacatgtacctgtgtaacagaggttg 18592945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 12 - 315
Target Start/End: Complemental strand, 34378182 - 34377880
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||    
T  34378182 caaagcccaaaaaccaacttgtgtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcactcc 34378083  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    |  ||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||| || |||    
T  34378082 ttgcccccggtacaccagagaaaacccaaatcaagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcctaccgaa 34377983  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    ||||||||||| |||| |||||||||||| ||||||| |||||||| |||||||||| |||||||| |||||||||||| ||||| |||||||||  |||    
T  34377982 aaccagcacacgatatataagacgaaagatatggcatacgaagtttaaacaacaaacgaatcaaaaggaaaaggctcaa-acaacatgacacacaccctc 34377884  T
Q  312 caaa 315  Q
    ||||    
T  34377883 caaa 34377880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 29087564 - 29087364
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| ||| ||| ||| |||| ||||||| |||||||| ||| |||||||||||| |||| | |||||||||| ||| |||||| |||||| ||||||||    
T  29087564 aaagcccagaaaccaatttgattcaaagaactgactcctgatctcgaatcaaaagggatcagtccaccagactttagaaccaaaatagcagagcacccct 29087465  T
Q  113 caccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaa 212  Q
    | ||| ||||||| |||||||  |||||| |||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  29087464 cgcccccggtacaacagagaattaccaaaacaagtcaaacaaagattgcagctagactccgactcccgatctcgaagccaaatgaaccggcccaccgaaa 29087365  T
Q  213 a 213  Q
    |    
T  29087364 a 29087364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 7392052 - 7392205
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaa 135  Q
    |||||| |||||||||||| ||||||||||||||||||| |||||||||| ||| ||||||| || |||||||||||||||||||||||| ||||||||     
T  7392052 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaagggcacccctcaccctcggtacatcagagaaac 7392151  T
Q  136 accaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagc 190  Q
    ||||||||||| ||||| ||||||||| |||||| || | |||||||||||||||    
T  7392152 accaaatcaagccaaac-aagattgcagctagacaccaactcccgatctcgaagc 7392205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 27 - 224
Target Start/End: Original strand, 13954246 - 13954441
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||   ||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| || | ||||||||||||| |||||||||    
T  13954246 aacttgagccaaagtaatgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcag-aaggcacccctcaccttcggtacac 13954344  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaa 224  Q
    |||||||| || |||||||||||||  ||||||||| |||||| |||| ||  ||||||||||| |||  ||||||||||| ||||||||||| ||||    
T  13954345 cagagaaacacaaaatcaagtcaaa-taagattgcagctagacaccgactcttgatctcgaagcaaaagtaaccggcccaccgaaaaccagcatacaa 13954441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 27 - 224
Target Start/End: Original strand, 7195251 - 7195447
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| |||||||||||| |||||||||||||||||||| ||||||||| ||   |||||| || ||||||||||||||||| |||||||    
T  7195251 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggctcaccagactttatggccaaatcagaagggcacccctcaccct-ggtacac 7195349  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccac-ggaaaaccagcacacaa 224  Q
    |||||||| || |||||| | ||||| || |||||| |||| | |||| ||||||||||||||| |||  ||| ||||||| ||||||||| |||||||    
T  7195350 cagagaaacactaaatcacgccaaac-aatattgcagctagccaccgactcccgatctcgaagcaaaagtaactggcccactggaaaaccaacacacaa 7195447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 27 - 218
Target Start/End: Complemental strand, 8297537 - 8297347
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| |||||||||||| ||||||||||| | ||  ||||||||  || ||| ||||||| || |||||||||||||||||||||||||    
T  8297537 aacttgagccaaagaactgactcccgatctcgaatcaaaaattattagcccaccatgctttagaaccaaatcagaagggcacccctcaccctcggtacac 8297438  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagc 218  Q
     ||||||| |||||||||||  ||||||| |||||| |||||| || | || |||||||||||| |||  || |||||||| ||||||||||    
T  8297437 tagagaaacaccaaatcaagcaaaacaaa-attgcagctagacaccaactctcgatctcgaagcaaaagtaatcggcccactgaaaaccagc 8297347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 309 - 398
Target Start/End: Complemental strand, 29087335 - 29087246
Alignment:
Q  309 ctccaaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttc 398  Q
    |||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  29087335 ctccaaactccgtaaacacctaaaccacccaaaaaacacaaacaagagctagtgacgacgaacatggacccatgtaacagaggttgcttc 29087246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 33258903 - 33259050
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaa 135  Q
    |||||| || ||||| ||| |||||||||||||||||||||||||||||| ||||||||||  || ||| ||||||||||| |||||||||||||||||     
T  33258903 caaagaactaactcctgatctcgaatcaaaagtgatcggcccaccagactttagcaccaaaacagaaggacacccctcaccttcggtacaccagagaaac 33259002  T
Q  136 accaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatct 184  Q
    ||||||||  | ||||| ||||||| | |||||  |||| |||||||||    
T  33259003 accaaatcgcgccaaac-aagattgtagctagataccgactcccgatct 33259050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 46 - 391
Target Start/End: Original strand, 26045995 - 26046340
Alignment:
Q  46 actcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaatt-agcagggcacccctcaccctcggtacaccagagaaaaaccaaatca 144  Q
    ||||||||| |||||||||||||||||||  ||||||||| ||| |||||| | |  | ||||||||| | || |||||||||||||||| |||||||||    
T  26045995 actcccgatctcgaatcaaaagtgatcggttcaccagactttaggaccaaactcaaaaaggcaccccttaacc-cggtacaccagagaaacaccaaatca 26046093  T
Q  145 agtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaatatgtaagacgaaagacatg 244  Q
     | |||| || ||||||| |||| | |||| ||||| ||||||||| |||| || | ||||||   |||| ||||||||| | ||| ||| || ||||||    
T  26046094 cgccaaataa-gattgcagctagccaccgactcccggtctcgaagcaaaattaatctgcccaccagaaactagcacacaaaaagtatgacaaacgacatg 26046192  T
Q  245 gcatgcgaagtttgaa-caacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctccaaactccgtaaacacctaaaccacccgaaga 343  Q
      |||||  | |  || ||||||||| |||||||  | ||||||||   |||| |||| | |   ||| |||| || |||||||||||| ||||| || |    
T  26046193 atatgcggtggtgcaaacaacaaacatatcaaaagaagaaggctcagtgcaacatgacccgcttcctctaaacaccctaaacacctaaaacaccccaaaa 26046292  T
Q  344 gcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagagg 391  Q
     ||||||||||||||||||| |||||||| | ||||| ||||||||||    
T  26046293 acacaaacaagagctagtgaagacgaacaaggacccgagtaacagagg 26046340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 37 - 168
Target Start/End: Complemental strand, 25992066 - 25991936
Alignment:
Q  37 aaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaa 136  Q
    ||||| ||||||| |||| |||||||||||| ||| ||||||||||||| |||||||||| ||| ||||||| ||||| | ||||||||||||| ||| |    
T  25992066 aaagaactgactctcgatctcgaatcaaaagcgattggcccaccagactttagcaccaaaatagaagggcactcctcatcttcggtacaccagaaaaaca 25991967  T
Q  137 ccaaatcaagtcaaacaaagattgcaactaga 168  Q
     ||||||  ||||||| ||||||||| |||||    
T  25991966 tcaaatcgtgtcaaac-aagattgcagctaga 25991936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 14302451 - 14302604
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaa 135  Q
    |||||| ||||||||| || ||||| ||||||||||| | |||||||||| ||| ||||||  || |||||| |||||||||||| |||||||||||||     
T  14302451 caaagaactgactcccaatctcgaaccaaaagtgatcagtccaccagactttaggaccaaaacagaagggcatccctcaccctcgatacaccagagaaac 14302550  T
Q  136 accaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagc 190  Q
    |||| |||| | |||||  || ||||| |||||| | || |||||||||||||||    
T  14302551 accagatcacgccaaac-tagcttgcagctagacacggactcccgatctcgaagc 14302604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 24072273 - 24072385
Alignment:
Q  22 aaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcgg 121  Q
    ||||||||||||  |||||| |||||| ||||| || ||||||||| |||| ||| |||||||| ||| ||||||| || ||||||||||  ||||||||    
T  24072273 aaatcaacttgaaccaaagaactgacttccgatctcaaatcaaaagcgatcagccaaccagactttaggaccaaatcagaagggcaccccaaaccctcgg 24072372  T
Q  122 tacaccagagaaa 134  Q
    | |||||||||||    
T  24072373 tccaccagagaaa 24072385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 39184208 - 39184306
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaa 134  Q
    |||||| |||||| ||||| ||||||||||||||||||||||||||||| | |  | ||||| || ||||||||||  ||| ||||| |||||||||||    
T  39184208 caaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagaccacatgatcaaatcagaagggcaccccaaaccgtcggttcaccagagaaa 39184306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 17854096 - 17854183
Alignment:
Q  44 tgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagag 131  Q
    ||||||||||| |||| ||||||| | ||||||||||| |||  |  |||||||||| |||||||||||||||| |||| ||||||||    
T  17854096 tgactcccgatctcgagtcaaaagcggtcggcccaccatacttcaagaccaaattagaagggcacccctcacccccggtccaccagag 17854183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 31721730 - 31721639
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaa 134  Q
    |||||||||||| |||||||||||| ||||||||||  |||||  || |||| || || ||||||||||| |||| |||| |||||||||||    
T  31721730 ctgactcccgatctcgaatcaaaagcgatcggcccattagacttcagaaccacatcagaagggcaccccttacccccggtccaccagagaaa 31721639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 21402853 - 21402903
Alignment:
Q  31 tgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccacca 81  Q
    ||||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  21402853 tgagtcaaagaactgactcccgatctcgaactaaaagtgatcggcccacca 21402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 22675336 - 22675394
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||| |||||| |||||||||||| |||||||||||  |||||| ||||||||||    
T  22675336 aacttgagccaaagaactgactcccgatctcgaatcaaaatcgatcggtccaccagact 22675394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 12046308 - 12046270
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccacca 81  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  12046308 ctgagtcccgatctcgaatcaaaagtgatcggcccacca 12046270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 27713138 - 27713080
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||| |||||| |||| ||||||| |||||||||||  ||||||||||| |||||    
T  27713138 aacttgagccaaagaactgattcccgatctcgaatcaaaaacgatcggcccactagact 27713080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 301; Significance: 1e-169; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 12 - 408
Target Start/End: Original strand, 46692816 - 46693212
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| ||||||||| |||||| || ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  46692816 caaagcccaaaaaccaacttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccagactatatcaccaaattagcagggcacctc 46692915  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||    
T  46692916 tcgcccccggtacaccagagaaaaatcaaatcaagtcaaacaaagattgcaactagacctcgactcccgatctcgaagccaaatgaatcggcccaccgaa 46693015  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    ||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||  |||    
T  46693016 aactagcacacaatatgtaagacaaaagacatggcatgtgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacataacacacaccctc 46693115  T
Q  312 caaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46693116 caaactccgtaaacacctaaaacacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 46693212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 12 - 408
Target Start/End: Original strand, 31585757 - 31586154
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31585757 caaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccc 31585856  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||  ||    
T  31585857 tcaccctcagtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccaaa 31585956  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    || ||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||  |||    
T  31585957 aatcagcaaacactatgtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacataacgtgacacgcaccctc 31586056  T
Q  312 caaactccgtaaacacctaaaccacccgaagagcac-aaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||| ||||||||||||||||||| || ||||| |||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  31586057 caaactctgtaaacacctaaaccacccaaaaagcacaaaacaagagccagtgacgacgaacatggacccgtgtaacagaggtttcttctaaaggaaat 31586154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 257; E-Value: 1e-142
Query Start/End: Original strand, 12 - 408
Target Start/End: Original strand, 30685901 - 30686297
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||  |||||||||||||||| |||||||||||| || ||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  30685901 caaagcccaaaagccaacttgagtcaaagaactgactcccgatctcaaatcaaaagtgatcggcccacaagactatagtaccaaattagcagggcacccc 30686000  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || |||  ||||||||||||||||||||||||||||||||||| |||||||  |||||| ||| |||||||||||||||||||||||||||||||| |||    
T  30686001 tcgccccaggtacaccagagaaaaaccaaatcaagtcaaacaaggattgcagttagacctcgactcccgatctcgaagccaaatgaaccggcccaccgaa 30686100  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    ||||| ||||||||||||||||||||||||| || | ||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||  |  |||    
T  30686101 aaccaacacacaatatgtaagacgaaagacaaggtaagcgaagtttaaacaacaaacagatcaaaaggaaaaggctcaacacaacgtgacacgaaccctc 30686200  T
Q  312 caaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||| || ||||||||||| | ||||||||||||||||    
T  30686201 caaactccgtaaacacctaaaccacccaaaaagcacaaacaagagctagtgacaacgaacatggactcgtgtaacagatgctgcttctaaaggaaat 30686297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 18 - 408
Target Start/End: Original strand, 24449933 - 24450325
Alignment:
Q  18 ccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccc 117  Q
    ||||||| |||||| || |||||| |||||| ||||| || ||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| |||    
T  24449933 ccaaaaaccaacttaagacaaagaactgacttccgatctcaaatcaaaagtgatcggcccaccaaactatagtaccaaaatagcagggcacccctcgccc 24450032  T
Q  118 tcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccag 217  Q
     ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||  ||||||||     
T  24450033 ccggtacaccagagaaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaaaaccaa 24450132  T
Q  218 cacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctccaaact 317  Q
    |||| |||||||||||||||||||||||| |||||||||| || |||||||||||| ||| || ||| ||||||||| |||||||| ||  | |||||||    
T  24450133 cacataatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaatccaaaggacaagactcaacacagcgtgacacgcaccccccaaact 24450232  T
Q  318 ccgtaaacacctaaaccaccc--gaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    |||||||||||||||||||||   || |||||||||||||||||| ||||||||||||| |||| | ||||| ||||||||||||||||||||    
T  24450233 ccgtaaacacctaaaccacccaaaaaaagcacaaacaagagctagagacgacgaacatggacccatttaacaaaggttgcttctaaaggaaat 24450325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 12 - 303
Target Start/End: Complemental strand, 41920536 - 41920246
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||  |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  41920536 caaagcccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactgtagtaccaaattagcagggcacccc 41920437  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||    
T  41920436 tcgccc-cagtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaa 41920338  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacac 303  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  41920337 aactagcacacaatatgtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacac 41920246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 18 - 408
Target Start/End: Original strand, 20113524 - 20113914
Alignment:
Q  18 ccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccc 117  Q
    ||||||| |||||| ||| ||||| |||| ||||||| | ||||||||| |||||| |||| |||||||||  ||||||||||||||||||||||| |||    
T  20113524 ccaaaaaccaacttaagttaaagaactgattcccgatcttgaatcaaaaatgatcgtcccagcagactataataccaaattagcagggcacccctcgccc 20113623  T
Q  118 tcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccag 217  Q
     ||||||||| ||||||||||||| ||  || ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||| ||    
T  20113624 ccggtacacccgagaaaaaccaaaccatatctaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaactag 20113723  T
Q  218 cacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctccaaact 317  Q
    |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||| |||||| ||||| | |||||||||| ||  || ||||||    
T  20113724 cacacaatatgtaagatgaaagacatggcatgcaaagtttaaacaacaaacaaatcaaaaggaaaagcctcaatataacgtgacacgcacccttcaaact 20113823  T
Q  318 ccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
     | ||| ||||||| |||||| || |||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  20113824 tcttaagcacctaatccacccaaaaagcacaaacaagagctagagacgacgaacatgaacccgtgtaacataggttgcttctaaaggaaat 20113914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 405
Target Start/End: Original strand, 24684476 - 24684866
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| ||||||| ||||| |||||||||| |||||  ||||| |||||| ||||||||||||||||||||||| ||| | |||||||| |||||||||||    
T  24684476 aaagcccaaaaaccaactagagtcaaagaactgacatccgatctcgaattaaaagtgatcggcccaccagactttagaatcaaattagtagggcacccct 24684575  T
Q  113 caccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaa 212  Q
    | ||| ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||  |||| || ||||    
T  24684576 cgcccccggtacaccagagaaaa-ccaaatcaagtcaaacaaagattacagctagaccccgactcccgatctcgaagccaaatgaattggcc-accgaaa 24684673  T
Q  213 accagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctcc 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||| || ||||||||||| ||||| | ||||||||  ||||    
T  24684674 accagcacacaatatgtaagacgaaagacatggcatgcgaagtttaaccaacagacaaatcacaaggaaaaggctcatcacaaagggacacacaccctcc 24684773  T
Q  313 aaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaagga 405  Q
    ||||| |||| || |||||||||||| ||  ||||||||||||||||||||||| ||||| | |||| ||||||| |||||||||| ||||||    
T  24684774 aaacttcgtagactcctaaaccacccaaaaggcacaaacaagagctagtgacgatgaacaaggacccatgtaacataggttgcttccaaagga 24684866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 12 - 298
Target Start/End: Original strand, 5389418 - 5389704
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| |||||||  ||||||||||||||| |||||||||||| ||||||||||||||||||||||  |||||||||| ||||||||||| |||||||||    
T  5389418 caaagcccaaaaacaaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccc 5389517  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||| |||    
T  5389518 tcgcccccggtacaccagagaaaaatcaaatcaagtcaaacaaagattgcagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaa 5389617  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgt 298  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  5389618 aaccagcacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggcttaacacaacgt 5389704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 13 - 390
Target Start/End: Complemental strand, 7857736 - 7857357
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||||||||||| |||||| ||  |||||| ||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  7857736 aaaggccaaaaaccaacttcagcaaaagagttgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccct 7857637  T
Q  113 caccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaa 212  Q
    | ||| | ||||||||||||| || || ||||||||||||| | ||||||||||||| || | ||||||||||||||| |||  || |||||||| | ||    
T  7857636 cgcccccagtacaccagagaacaa-catatcaagtcaaacata-attgcaactagacaccaactcccgatctcgaagcaaaaataatcggcccactggaa 7857539  T
Q  213 accagcacacaatatgtaagacgaaagac-atggcatgcga--agtttgaacaacaaacaaatcaaaaagaaaaggctc-aacacaacgtgacacacaat 308  Q
    |||||||||||||||||||||||| | || |||  ||||||   ||    ||||||||  | ||| || ||||||| || ||||||||| |||||||       
T  7857538 accagcacacaatatgtaagacgataaacaatgatatgcgattggtgcagacaacaaatcagtcacaaggaaaaggatcaaacacaacgggacacactcc 7857439  T
Q  309 ctccaaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagag 390  Q
    |||||||| || |||||||||  || |||| ||   | |||||||||||||||||||||||||||| ||||| |||||||||    
T  7857438 ctccaaacaccctaaacaccttgacaaccccaaagacgcaaacaagagctagtgacgacgaacatggacccgagtaacagag 7857357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 12 - 407
Target Start/End: Complemental strand, 24659013 - 24658616
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| |||||| || ||||||||||||||||||| |||||||||||||||| ||||||||||||| ||| ||||||| |||||||||||||    
T  24659013 caaagcccaaaaaccaacttcagccaaagagctgactcccgatctcgaatcaaaagtgattggcccaccagactttagaaccaaatcagcagggcacccc 24658914  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    |  ||| || |||||||||| || |||| |||||||||||| | ||||||| |||||| || | ||||||||| ||||| |||  ||||||||||| | |    
T  24658913 ttgcccccgatacaccagag-aacaccatatcaagtcaaac-atgattgcagctagacaccaactcccgatcttgaagcaaaaataaccggcccaccgga 24658816  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcga--agtttgaacaacaaacaaatcaaaaagaaaaggctca--acacaacgtgacacacaa 307  Q
      ||||||||||| ||||||||||| |||||||  ||||||   ||   || ||||||| | ||| || ||||||||| |  |||||||| ||||||||     
T  24658815 ctccagcacacaaaatgtaagacgatagacatgatatgcgattggtccaaaaaacaaactagtcacaaggaaaaggcttaacacacaacgggacacacac 24658716  T
Q  308 tctccaaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaa-catgtacccgtgtaacagaggttgcttctaaaggaa 406  Q
     |||||||| || |||||| |||||| |||| || ||| | ||||||||| |||||||||||| |||| |||  || |||||||||||  || |||||||    
T  24658715 cctccaaacaccctaaacatctaaacaaccc-aaaagcgccaacaagagcaagtgacgacgaatcatggacctatgaaacagaggttggctccaaaggaa 24658617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 20 - 394
Target Start/End: Original strand, 46814472 - 46814845
Alignment:
Q  20 aaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctc 119  Q
    ||||| ||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||  ||| |    
T  46814472 aaaaaccaacttgagccaaaaagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcaccccttgccccc 46814571  T
Q  120 ggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagca 219  Q
    |||||||||||| || |||| |||||||||||| | |||||||||||||| || | || |||||||||| | |||  ||||||||||  | | |||||||    
T  46814572 ggtacaccagag-aacaccatatcaagtcaaac-aggattgcaactagacaccaactctcgatctcgaatcaaaaataaccggcccatcggacaccagca 46814669  T
Q  220 cacaatatgtaagacgaaagacatggcatgcga--agtttgaacaacaaacaaatcaaaaagaaaaggctcaa-cacaacgtgacacacaatctccaaac 316  Q
     |||| || ||||| |  |||||||  ||| ||   ||   |||||||||  | ||| || |||||||||||| ||||||| ||||| ||  ||||||||    
T  46814670 aacaa-atataagatggtagacatgatatgtgattggtgcaaacaacaaaatagtcacaaggaaaaggctcaaccacaacgggacacgcaccctccaaac 46814768  T
Q  317 tccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttg 394  Q
     || ||||||||||||| |||| || ||| | ||||||||| ||||||||| |||||| ||||||| || ||||||||    
T  46814769 accctaaacacctaaacaaccc-aaaagcgccaacaagagcaagtgacgacaaacatggacccgtgaaatagaggttg 46814845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 5459245 - 5459133
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| |||||||||||||||| ||||| |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5459245 caaagcccaaaaatcaacttgaatcaaataattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggtacccc 5459146  T
Q  112 tcaccctcggtac 124  Q
    || ||| ||||||    
T  5459145 tcgcccccggtac 5459133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 9313310 - 9313463
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaa 135  Q
    |||||| |||||||||||| ||||||||||||||||| |||||| ||||| ||| ||||||| || |||||||||||||| | || ||||| |||||||     
T  9313310 caaagaactgactcccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaatcagaagggcacccctcacgcccgatacacgagagaaac 9313409  T
Q  136 accaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagc 190  Q
    ||||||||| | |||||||| |||||| |||||| || | |||||||||||||||    
T  9313410 accaaatcacggcaaacaaa-attgcagctagacaccaactcccgatctcgaagc 9313463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 27 - 244
Target Start/End: Original strand, 32864573 - 32864791
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    ||||||||||||||| | |||| ||||| |||||| ||||||||| |||||||||| || ||| |||||||  | |||||||||||||||||| ||| |     
T  32864573 aacttgagtcaaagaaccgacttccgatctcgaattaaaagtgattggcccaccagcctttaggaccaaatcggaagggcacccctcaccctcagtagat 32864672  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggccca-cggaaaaccagcacacaat 225  Q
    |||| ||| ||||||| ||| ||||  ||||||| | |||||| |||| ||| ||| ||||||| |||  |||||||||| |||||||| |||||||||     
T  32864673 cagataaacaccaaataaagccaaaacaagattgtagctagacaccgactcctgatttcgaagcaaaagtaaccggcccaccggaaaactagcacacaaa 32864772  T
Q  226 atgtaagacgaaagacatg 244  Q
    | ||| ||| |||||||||    
T  32864773 acgtatgacaaaagacatg 32864791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 27031846 - 27031958
Alignment:
Q  21 aaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcg 120  Q
    |||| ||||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||| ||||||| ||||||||||||||  ||| ||    
T  27031846 aaaaccaacttgagccaaagagctgactctcgatctcgaatcaaaagtgatcggcccactagactttagaaccaaatcagcagggcacccctttcccccg 27031945  T
Q  121 gtacaccagagaa 133  Q
    |||||||||||||    
T  27031946 gtacaccagagaa 27031958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 17033655 - 17033449
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||  |||||| |||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| || ||||||||||  || |||||| |||    
T  17033655 aacttgaaccaaagaactgactcccgatctcgattcaaaagtgatcggcccaccagactataggaccaaatcagaagggcaccccctactctcggttcac 17033556  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaata 226  Q
    || ||||  |||  |   || ||||| |||||||||||||||| || | || |||||||||| | |||  |||||||||||   || |||||||||||||    
T  17033555 catagaatcaccgtagtcagccaaac-aagattgcaactagacgccaattctcgatctcgaaacaaaagtaaccggcccaccagaatccagcacacaata 17033457  T
Q  227 tgtaagac 234  Q
     |||||||    
T  17033456 agtaagac 17033449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 36 - 244
Target Start/End: Original strand, 38544759 - 38544965
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaa 135  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||||||  |  ||||||| || |||| ||||||||  | | || |||||||||||     
T  38544759 caaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg-acccctcattcccagtccaccagagaaac 38544857  T
Q  136 acc-aaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaatatgtaagac 234  Q
    ||| ||||||| |||||| ||||||||| |||||| || | |||| |||||||||| |||  || ||||||||   || |||||||||||||||||||||    
T  38544858 accaaaatcaa-tcaaac-aagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccactagaatccagcacacaatatgtaagac 38544955  T
Q  235 gaaagacatg 244  Q
     || ||||||    
T  38544956 aaacgacatg 38544965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 41920228 - 41920168
Alignment:
Q  348 aaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  41920228 aaacaagagctagtgacgacgaacatggacccgtgtaatagaggttgcttctaaaggaaat 41920168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 19598705 - 19598599
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    ||||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||||  || ||| ||  ||  |||||||||| ||||||||| |||    
T  19598705 aacttgagtcaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagacttcaggacccaaccagacgggcaccccttaccctcggtccac 19598606  T
Q  127 cagagaa 133  Q
    |||||||    
T  19598605 cagagaa 19598599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 27102260 - 27102142
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggca-cccctcaccctcggtaca 125  Q
    |||||||  |||||| |||||||||||| ||||||||||||||||||||||   ||||| |   ||||||  || |||||| ||||||||||||||||||    
T  27102260 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccgttagactttgagaccaaaacagaagggcaccccctcaccctcggtaca 27102161  T
Q  126 ccagagaaaaaccaaatca 144  Q
    ||||||||| |||||||||    
T  27102160 ccagagaaacaccaaatca 27102142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 4651833 - 4651742
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaatt-agcagggcacccctcaccctcggtacaccagagaaa 134  Q
    |||||||||||| |||||||||||||||||||||| ||||||| | | | |||||| || ||||||||||| |||| ||||||||||||||||    
T  4651833 ctgactcccgatctcgaatcaaaagtgatcggccccccagact-tcggaacaaattcagaagggcaccccttacccccggtacaccagagaaa 4651742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 50589219 - 50589423
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||| | |||||| ||| ||||||||||||||||||||| |||| ||||||| ||||  || ||| ||  ||  |||||||||| |||| | || |||    
T  50589219 aacttgggccaaagaactggctcccgatttcgaatcaaaagcgatcagcccaccggacttcaggacccaaccagacgggcaccccttacccccagtccac 50589318  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaata 226  Q
    ||||||||  ||  | | || ||||||| ||  ||| |||||| || | ||||||||||||||| |||| |||||||||||   || |||||||||||||    
T  50589319 cagagaaa--ccgtagccagccaaacaa-gaaagcagctagacgccaagtcccgatctcgaagcaaaattaaccggcccaccagaatccagcacacaata 50589415  T
Q  227 tgtaagac 234  Q
    ||||||||    
T  50589416 tgtaagac 50589423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 190
Target Start/End: Complemental strand, 34774923 - 34774779
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaat 142  Q
    |||||||||||| |||| |||||||||||||| |||||||||  ||| ||||||| || |||||||| ||||||| | ||| || ||||||| | |||||    
T  34774923 ctgactcccgatctcga-tcaaaagtgatcggtccaccagacgttaggaccaaatcagaagggcaccactcaccc-ccgtatactagagaaacatcaaat 34774826  T
Q  143 caagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagc 190  Q
    |||| ||||| ||||||| |  ||||| |||| ||||| |||||||||    
T  34774825 caagccaaac-aagattgtagttagacaccgactcccgttctcgaagc 34774779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 6583245 - 6583319
Alignment:
Q  44 tgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccct 118  Q
    ||||| ||||| ||||||||||||||||||| |||||||||| ||| ||||||| || | |||||||||||||||    
T  6583245 tgactgccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaaaggcacccctcaccct 6583319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 16147624 - 16147464
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||  |||||| |||||||||||| | ||||||||| | |||| ||||||| |||  |  ||||||  || |||| ||| ||||||| |||||| |    
T  16147624 aacttgacccaaagaactgactcccgatattgaatcaaaattcatcgtcccaccatacttaacgaccaaaacagaagggaacctctcacccccggtacgc 16147525  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaa 188  Q
     ||||||| ||||||||||| ||||| ||||||||| ||||||   || |||||||||||||    
T  16147524 tagagaaacaccaaatcaagccaaac-aagattgcagctagacagtgactcccgatctcgaa 16147464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 42374216 - 42374125
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaa 134  Q
    |||||||||||| || ||||||||| |||||| ||||||||| | |  ||||||| || ||||||||||  ||||||||||||||| |||||    
T  42374216 ctgactcccgatctcaaatcaaaagcgatcggtccaccagacaacatgaccaaatcagaagggcaccccaaaccctcggtacaccaaagaaa 42374125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 347 - 408
Target Start/End: Complemental strand, 16147317 - 16147256
Alignment:
Q  347 caaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    |||| |||||||||||||||||||||||  ||||||||||||||| ||| || |||||||||    
T  16147317 caaataagagctagtgacgacgaacatgggcccgtgtaacagaggctgcctccaaaggaaat 16147256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 15840940 - 15840982
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||||||| ||||||||||||||||| ||||||||||||    
T  15840940 ctgactcccgatctcgaatcaaaagtgatcagcccaccagact 15840982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 10785492 - 10785540
Alignment:
Q  176 tcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaa 224  Q
    ||||||||||||||| |||| ||||||||||| | ||||||||||||||    
T  10785492 tcccgatctcgaagcaaaattaaccggcccaccggaaaccagcacacaa 10785540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 6583333 - 6583399
Alignment:
Q  158 ttgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaa 224  Q
    ||||| |||||| |||| ||||||||||||||| |||  ||||||||||| || ||||| |||||||    
T  6583333 ttgcagctagacaccgactcccgatctcgaagcaaaagtaaccggcccaccgacaaccaacacacaa 6583399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 30655613 - 30655571
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||||||| |||||||||||| ||||||||||| |||||    
T  30655613 ctgactcccgatctcgaatcaaaagcgatcggcccactagact 30655571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 297; Significance: 1e-166; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 12 - 408
Target Start/End: Original strand, 39338862 - 39339258
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  39338862 caaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagactatagtaccaaattagcagggcacccc 39338961  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| |||||||||| |||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||| |||    
T  39338962 tcgcccccggtacaccaaagaaaaaccaaatcaagtcaaacaaatattgcagctagaccccgactcccgatctcgaagccaaatgaactggcccaccgaa 39339061  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||  |||    
T  39339062 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaataaacaaatcaaaaggaaaaggctcaacacaacgtgacacacaccctc 39339161  T
Q  312 caaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    |||||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| ||||    
T  39339162 caaacttcgtaaacacctaaaccacccaaaaagcacaaacaagagctagtaacgacgaacatggacccgtgtaacaggggttgcttctaaagaaaat 39339258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 12 - 376
Target Start/End: Complemental strand, 10524185 - 10523817
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagc----tgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggca 107  Q
    ||||| ||||||| ||||||||||||||||      ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10524185 caaagcccaaaaaccaacttgagtcaaagaatatattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggcagggca 10524086  T
Q  108 cccctcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccac 207  Q
    || ||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  10524085 cctctcgcccccagtagaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagagcccgactcccgatctcgaagccaaatgaaccggtccac 10523986  T
Q  208 ggaaaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaa 307  Q
     ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  10523985 cgaaaaccagcacacaatatgtaagatgaaagacatggcatgcgaaatttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacgcac 10523886  T
Q  308 tctccaaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgta 376  Q
     || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10523885 cctacaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgta 10523817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 13 - 244
Target Start/End: Complemental strand, 7874374 - 7874145
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||||| |||||||||||| |    
T  7874374 aaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcgacccaccagactttagaaccaaatcagcagggcacccat 7874275  T
Q  113 caccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaa 212  Q
    | |||||||||||| |||| || |||| |||||||||| | | ||||||| |||||| || | ||||||||||||||| |||  ||||||||||| | |     
T  7874274 cgccctcggtacactagag-aacaccatatcaagtcaagc-aggattgcagctagacaccaactcccgatctcgaagcaaaaaaaaccggcccaccggac 7874177  T
Q  213 accagcacacaatatgtaagacgaaagacatg 244  Q
    ||||||||||||||| |||||||| |||||||    
T  7874176 accagcacacaatatttaagacgatagacatg 7874145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 38 - 408
Target Start/End: Complemental strand, 17105470 - 17105099
Alignment:
Q  38 aagagctgactcccgatttcgaatcaaaa-gtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaa 136  Q
    |||| |||| || |||| ||||||||||| |||||||||||| ||||||  || ||||||| || ||||||||||||||||  ||||||||| ||||| |    
T  17105470 aagatctgattctcgatctcgaatcaaaaagtgatcggcccatcagacttcagtaccaaatcagtagggcacccctcacccctggtacaccaaagaaaca 17105371  T
Q  137 ccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaatatgtaagacga 236  Q
    || ||| ||||||||| ||| ||||| |||||| |||| |||  ||||| |||| |||  ||||| ||||| | ||||||||||||||||||||||| ||    
T  17105370 cctaattaagtcaaac-aaggttgcagctagacgccgactccttatctccaagcaaaagtaaccgacccaccggaaaccagcacacaatatgtaagatga 17105272  T
Q  237 aagacatggcatgcga-agtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctccaaactccgtaaacacctaaacca 335  Q
    ||||||||  ||| ||  ||   |||| |||||||||||||| ||||||||||| ||||||| ||||  ||  ||| |||| || ||||||||| |||      
T  17105271 aagacatgatatgagatggtgcaaacaccaaacaaatcaaaaggaaaaggctcatcacaacgggacaagcaccctctaaacaccctaaacaccttaacag 17105172  T
Q  336 cccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||  || ||  |||| ||||||||||||||||||||||| ||| ||||| |||||| ||| || |||||||||    
T  17105171 ccaaaaaagtgcaaataagagctagtgacgacgaacatggacctgtgtagcagaggctgcctccaaaggaaat 17105099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 37 - 226
Target Start/End: Original strand, 14106546 - 14106734
Alignment:
Q  37 aaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaa 136  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| |||| ||||||  |||| || |    
T  14106546 aaagagctgactcccgatcttgaatcaaaagtgatcggcccaccagactttaggaccaaatcagcagggcacccctcgccctgggtacatgagaggaaca 14106645  T
Q  137 ccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaata 226  Q
    |||||||||||||||| | ||||||| |||| | |||| ||||  ||||||||| |||  ||||||||||| | |||||| |||||||||    
T  14106646 ccaaatcaagtcaaac-aggattgcagctagtcaccgactccctgtctcgaagcaaaagtaaccggcccaccggaaaccaacacacaata 14106734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 27 - 206
Target Start/End: Complemental strand, 1269552 - 1269373
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| |||||| ||||| |||||||||||||||||||||||||||||| ||| || |||| || ||||||||||||||| | |||| ||    
T  1269552 aacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccctcacctttggtatac 1269453  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggccca 206  Q
    |||||||| | ||||| ||| ||||  |||| |||| ||||||  ||| ||||||||||||||| |||| ||||| ||||    
T  1269452 cagagaaacatcaaattaagccaaaacaagaatgcagctagacatcgactcccgatctcgaagcaaaattaaccgaccca 1269373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 387250 - 387128
Alignment:
Q  19 caaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccct 118  Q
    |||||| ||||||||||||||||  ||||||||||| || |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||| |||     
T  387250 caaaaaccaacttgagtcaaagaattgactcccgatctcaaatcaaaagtgatcagcccaccagactttagtaccaaattagcagggcacccctcgccc- 387152  T
Q  119 cggtacaccagagaaaaaccaaat 142  Q
    ||||  ||||||||||||||||||    
T  387151 cggtgtaccagagaaaaaccaaat 387128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 13 - 133
Target Start/End: Complemental strand, 14405281 - 14405162
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| | ||  ||||||||    
T  14405281 aaagcccaaaaaccaacttgagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcatca-agcacccct 14405183  T
Q  113 caccctcggtacaccagagaa 133  Q
    | ||| |||||||||||||||    
T  14405182 cgcccccggtacaccagagaa 14405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 13337343 - 13337226
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggca-cccctcaccctcggtaca 125  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||| ||    ||||| || |||||| ||||||||||| ||||||    
T  13337343 aacttgagtcaaagaactgacttccgatttcgaatcaaaagtgatcggcccatcagactttaaggtcaaatcagaagggcaccccctcaccct-ggtaca 13337245  T
Q  126 ccagagaaaaaccaaatca 144  Q
    ||||||||| |||||||||    
T  13337244 ccagagaaacaccaaatca 13337226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 58 - 224
Target Start/End: Original strand, 37770684 - 37770849
Alignment:
Q  58 gaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaaga 157  Q
    |||||||||||||||||||||||| ||  ||| ||||||| ||  |||||||||||||||||||||||||||||||| || |||||  | ||||   | |    
T  37770684 gaatcaaaagtgatcggcccaccaaaccttaggaccaaatcagatgggcacccctcaccctcggtacaccagagaaacactaaatcgcgccaaatcga-a 37770782  T
Q  158 ttgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaa 224  Q
    ||||  |||||| || | ||||||||||||||| |||  ||||||||||| || |||||||| ||||    
T  37770783 ttgctgctagacaccaactcccgatctcgaagcaaaagtaaccggcccaccgataaccagcaaacaa 37770849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 41086829 - 41086994
Alignment:
Q  56 tcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaa 155  Q
    |||||||||||||||| | ||||||||||||||  ||||||| || |||||| |||||||||  |||||||||||| || ||||||||| | ||||||||    
T  41086829 tcgaatcaaaagtgattgacccaccagactatatgaccaaatcagaagggca-ccctcacccctggtacaccagag-aacaccaaatcacgccaaacaaa 41086926  T
Q  156 gattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaa 224  Q
     |||| | || ||| |||| |||||||||| |||| |||  || ||| |||| | ||||| ||||||||    
T  41086927 -attgtagctggacaccgattcccgatctcaaagcaaaagtaatcggtccaccggaaacctgcacacaa 41086994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 22885145 - 22885203
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||  |||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  22885145 aacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 22885203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 2062958 - 2062901
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagac 84  Q
    |||||||| ||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  2062958 aacttgagccaaagagctgactcccgatctcgaatcaaaagcaatcggcccaccagac 2062901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 4472006 - 4471886
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| |||||||  ||||||| ||||||| |||||||||||| |||||||||| | |||||||||||||||||  || ||||||  ||  |||| |||||    
T  4472006 aaagcccaaaaacaaacttgaatcaaagaactgactcccgatctcgaatcaaaggcgatcggcccaccagactccaggaccaaaccagacgggc-cccct 4471908  T
Q  113 caccctcggtacaccagagaaa 134  Q
     |||| |||| |||||||||||    
T  4471907 tacccccggtccaccagagaaa 4471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 31902442 - 31902533
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaa 134  Q
    |||||||||||| |||||| ||||| ||| |||||||||||||  |||| ||||| || ||| ||||||| |||| |||| |||||||||||    
T  31902442 ctgactcccgatctcgaattaaaagcgattggcccaccagacttcagcatcaaataagaaggacacccctaacccccggtccaccagagaaa 31902533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 4162040 - 4162090
Alignment:
Q  35 tcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    ||||| ||||| |||||||| ||||||||||||||||||||||||||||||    
T  4162040 tcaaaaagctggctcccgatctcgaatcaaaagtgatcggcccaccagact 4162090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 10173590 - 10173751
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||| | || ||| ||||| |||||||||||||||||||||||| ||||| ||| ||||||  |  || |||||| |||||   |||||||    
T  10173590 aacttgagccaaataacttacttccgatctcgaatcaaaagtgatcggcccactagactttaggaccaaaacaaaagagcacccttcacctctggtacac 10173689  T
Q  127 cagagaaaaacc-aaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaa 188  Q
    |||||||| |||   |||||| ||||| ||||||||| |||||| |||| | |||||| ||||    
T  10173690 cagagaaacaccgttatcaagccaaac-aagattgcagctagacaccgacttccgatcccgaa 10173751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 16960051 - 16959993
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||| |||||| ||||||| |||| |||||||||||| |||||||||||||||||    
T  16960051 aacttgagccaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagact 16959993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 23650437 - 23650364
Alignment:
Q  44 tgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccc 117  Q
    ||||||||||| |||||||||||| |||| |||||||||||| ||| ||||||| || | || |||||||||||    
T  23650437 tgactcccgatctcgaatcaaaagcgatcagcccaccagactctagaaccaaataagtaaggtacccctcaccc 23650364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 15126426 - 15126529
Alignment:
Q  31 tgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccaga 130  Q
    |||| |||||| | |||||||||| ||||||||||| ||||||||||||||||||  || ||| ||  ||  ||| |||||| |||| |||| |||||||    
T  15126426 tgagccaaagaaccgactcccgatctcgaatcaaaaatgatcggcccaccagacttcaggacccaacgagacgggaaccccttacccccggtccaccaga 15126525  T
Q  131 gaaa 134  Q
    ||||    
T  15126526 gaaa 15126529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 33788653 - 33788702
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||| ||||||||| || |||||||||||| |||||||||||||||||    
T  33788653 caaagaactgactcccaatctcgaatcaaaagcgatcggcccaccagact 33788702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 5254331 - 5254267
Alignment:
Q  21 aaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||| ||||||||  |||||||| |||||||||| || ||| ||||||||||||||||| |||||    
T  5254331 aaaaccaacttgaaccaaagagcagactcccgatctcaaattaaaagtgatcggcccactagact 5254267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 7696032 - 7695985
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcgg 74  Q
    |||||||| |||||| |||||||||| | |||||||||||||||||||    
T  7696032 aacttgagccaaagaactgactcccggtatcgaatcaaaagtgatcgg 7695985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 36276184 - 36276241
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||||||||||  ||||||||||| |||||||||||| || | ||||||||||||    
T  36276184 aacttgagtcaaagat-tgactcccgatctcgaatcaaaagcgaacagcccaccagact 36276241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 12 - 408
Target Start/End: Original strand, 47325882 - 47326278
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  47325882 caaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcaaatcaaaagcgatcggcccaccagactatagtaccaaattagcaaggcacccc 47325981  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||  |||    
T  47325982 tcgcccccggtacaccagagaaaaaccaaatcaagttaaacaaagattgctgctagaccccgactcccgatctcgaagccaaatgaaccggcccatcgaa 47326081  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||  |||    
T  47326082 aaccagcacacaatatgtaagaagaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccctc 47326181  T
Q  312 caaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||||||||| ||||||||||||| || ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  47326182 caaactccgtaaatacctaaaccacccaaaaagcacaaacaagagctagtaacgacgaacatggacccgtgtaacaaaggttgcttctaaaggaaat 47326278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 12 - 408
Target Start/End: Complemental strand, 10244266 - 10243875
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    |||||||||||||  ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10244266 caaaggccaaaaactaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagattatagcaccaaattagcagggcacccc 10244167  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| ||||||||||||||||||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| || |||    
T  10244166 tctcccccggtacaccagagaaaaaccaaatcta-tcaaacaaagattgcaactagatcccgactcccgatctcgaagccaaatgaaccagccaaccgaa 10244068  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||| | ||  |||    
T  10244067 aaccagcacacaatatgtaagacgaaa-acatggcatgcgaagtttgaacaacaaacaa---aaaaagaaaaggctcaaaacaacgtgacccgcaccctc 10243972  T
Q  312 caaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    | ||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10243971 ctaactccgtaaacacctacaccacccgaaaatcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 10243875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 7 - 408
Target Start/End: Original strand, 3419648 - 3420050
Alignment:
Q  7 agaagcaaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggc 106  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||| ||||||||| ||||||    
T  3419648 agaaacaaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccacactttagtaccaaattaacagggc 3419747  T
Q  107 acccctcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggccca 206  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |     
T  3419748 acccctcgcccccggtataccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggctcg 3419847  T
Q  207 cggaaaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacac-aacgtgacacac 305  Q
    | ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||| |||||||||| |    
T  3419848 ccgaaaaccagcacacaatatgtaagacgaaagacatggcatgtgaagtttaaacaacaaacaaatcaaaaggaaagggctcaacacaaacgtgacacgc 3419947  T
Q  306 aatctccaaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaagga 405  Q
    |  |||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||| |    
T  3419948 accctccaaactccgtaaacacctaaaccacccaaaaagcacaaacaagagctagtgacaacgaacatggacccgtgtaacagaggttgcttccaaagaa 3420047  T
Q  406 aat 408  Q
    |||    
T  3420048 aat 3420050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 12 - 408
Target Start/End: Complemental strand, 38306345 - 38305949
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| |||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38306345 caaagcccaaaaaccaacttgagtcaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccc 38306246  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||    
T  38306245 tcgccccctgtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgttctcgaagccaaatgaaccggcccaccgaa 38306146  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||  ||  |||    
T  38306145 aaccagcacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgttgcaagcaccctc 38306046  T
Q  312 caaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||||||||||| ||||||||||| || ||||||| |||||||||||||||| ||||||| |||||||||||||||||||  | ||||||||||    
T  38306045 caaactccgtaaacatctaaaccacccaaaaagcacaaccaagagctagtgacgatgaacatggacccgtgtaacagaggttgtatttaaaggaaat 38305949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 12 - 408
Target Start/End: Complemental strand, 37795073 - 37794689
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| |||||||| ||||||| |||||||||||| ||||||||||| ||| |||||||||| ||||||  |||||||||||||||||||||    
T  37795073 caaagcccaaaaaccaacttgactcaaagaactgactcccgatctcgaatcaaaactgaacggcccaccatactatattaccaaattagcagggcacccc 37794974  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| ||||||||||           ||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||| |||    
T  37794973 tcgcccccggtacacca-----------aatcaagtcaaacaaagattgcagctagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaa 37794885  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    |||||||||||||||||||| || |||| |  |||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||  ||     
T  37794884 aaccagcacacaatatgtaaaacaaaagtcc-ggcatgcgaagtttgaacaacaaacaaatcaaaaggaaaatgctcaacacaatgtgacacacaccctt 37794786  T
Q  312 caaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| || |||||||||| |||||||||||||||    
T  37794785 caaactccgtaaacacctaaaccacccaaaaagcacaaacaagagctagtgacgacgaacatggacctgtataacagaggtcgcttctaaaggaaat 37794689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 44 - 408
Target Start/End: Complemental strand, 25160867 - 25160504
Alignment:
Q  44 tgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaatc 143  Q
    ||||| ||||| ||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  25160867 tgacttccgatctcgaatcaaaagtaatcggtccaccagactatagaaccaaattagcagggcacccctcgccctcggtacaccagagaaaaaccaaacc 25160768  T
Q  144 aagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaatatgtaagacgaaagacat 243  Q
    |||||||||||| || ||||||||||||||| |||||||| | |||||||||||| |  ||||| ||||||||| |||||||||||||||| ||||||||    
T  25160767 aagtcaaacaaaaatagcaactagaccccgactcccgatcccaaagccaaatgaatcatcccaccgaaaaccagtacacaatatgtaagacaaaagacat 25160668  T
Q  244 ggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctccaaactccgtaaacacctaaaccacccgaaga 343  Q
    |||||||| ||||| ||||||||||||||||||| ||| ||| |||| ||||||||||||  |  |||||||||| |||||||||||||||| || || |    
T  25160667 ggcatgcgtagtttaaacaacaaacaaatcaaaaggaataggttcaa-acaacgtgacaccgaccctccaaactctgtaaacacctaaaccatccaaaaa 25160569  T
Q  344 gcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| | ||||||||    
T  25160568 gcacaaacaagagctagtgacgacgaacatggacccgtgtaacataggttgctttttaaggaaat 25160504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 12 - 291
Target Start/End: Original strand, 5860285 - 5860564
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| ||||||| ||||||||  ||||||||||| |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||||    
T  5860285 caaagcccaaaaaccaacttgcgtcaaagaattgactcccgatctcgaatcaaaagcgataggcccaccggactatagtaccaaattagcagggcacccc 5860384  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| |||||||  |||||||||||||||  || |||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||  |||    
T  5860385 tcgcccccggtacagtagagaaaaaccaaattcagccaaacaaagattgcagatagacctcgactcccgatctcgaagccaaatgaaccggcccatcgaa 5860484  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaac 291  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| || |||| |||||    
T  5860485 aaccagcacacaatatgtaagacgaaagacatggcgagcgaagtttaaacaacaaacaaatcaaaaggagaaggttcaac 5860564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 27 - 408
Target Start/End: Complemental strand, 33435178 - 33434796
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| |||||||||||| |||||||||||||||||| | ||||||||| ||| ||||||||| ||||||||||||| ||| ||||||||    
T  33435178 aacttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgtctcaccagactttagtaccaaattaacagggcacccctcgcccccggtacac 33435079  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaata 226  Q
    ||||||||| ||||||||||  ||||||||||| ||||||||||| || | ||||||||||||| |||  || |||||||| | |||||| |||||||||    
T  33435078 cagagaaaa-ccaaatcaagctaaacaaagattacaactagacccggactaccgatctcgaagcaaaagtaatcggcccaccggaaaccaacacacaata 33434980  T
Q  227 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctccaaactccgtaaaca 326  Q
    ||||| ||||| |||||||||||| |||||| |||||| |||  ||| ||| |||||||||| |||||||| ||| | |   |||||||| || |||| |    
T  33434979 tgtaatacgaatgacatggcatgcaaagtttaaacaaccaacctatcgaaaggaaaaggctcgacacaacgggacccgctccctccaaacaccctaaata 33434880  T
Q  327 cctaaaccaccc-gaagagcac-aaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||||||||  || ||||| ||||| ||||||||||||||||||||  ||||| |||||||||||||| |  |||||||||    
T  33434879 cctaaaccacccaaaaaagcacaaaacaggagctagtgacgacgaacatagacccgagtaacagaggttgccttcaaaggaaat 33434796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 13 - 291
Target Start/End: Complemental strand, 3867199 - 3866922
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| ||||||| |||||||||||||||| |||||||||| | ||||||||||||||||| |||||||| | | ||| |||||||||||||| ||||| |    
T  3867199 aaagcccaaaaaccaacttgagtcaaagaactgactcccggtctcgaatcaaaagtgatcagcccaccatattttagtaccaaattagcaggccaccctt 3867100  T
Q  113 caccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaa 212  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||| || |||||||||||| |||  || || ||||| | ||    
T  3867099 cgccctcggtacaccagagaaaaaccatatcaagtcaaacaaagattgtagctagaccccgactctcgatctcgaagcaaaagtaatcgacccaccg-aa 3867001  T
Q  213 accagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaac 291  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||| |||||||||||||    
T  3867000 accaggacacaatatgtaagacgaaagacgtggcatgtgaagtttaaacaacaaataaatcaaaaggaaaaggctcaac 3866922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 41089752 - 41089918
Alignment:
Q  19 caaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccct 118  Q
    |||||| |||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||| ||||||||||||| ||||||||| |||     
T  41089752 caaaaaccaacttgagtcaaagagctgactcccaatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagagcacccctcgcccc 41089851  T
Q  119 cggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctc 185  Q
    || ||||||||||||||||||||||||||||||||||||||| | ||||||||| | || |||||||    
T  41089852 cgatacaccagagaaaaaccaaatcaagtcaaacaaagattgtagctagaccccaactctcgatctc 41089918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 13 - 244
Target Start/End: Complemental strand, 34390045 - 34389815
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| ||||||| |||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| ||  ||||||| |||||||||| |||    
T  34390045 aaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttaaaaccaaatcagcagggcactcct 34389946  T
Q  113 caccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaa 212  Q
    ||||| | ||||||||||| || |||| |||||||||||  | |||||||||||||| || | | | ||||||||||| |||  ||| ||||||    |     
T  34389945 cacccccagtacaccagag-aacaccatatcaagtcaaaacatgattgcaactagacaccaacttctgatctcgaagcaaaaataactggcccatcagac 34389847  T
Q  213 accagcacacaatatgtaagacgaaagacatg 244  Q
    |||||||||||||||||| ||||| |||||||    
T  34389846 accagcacacaatatgtacgacgatagacatg 34389815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 27 - 243
Target Start/End: Original strand, 6716748 - 6716963
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||||| |||||||| ||  |  |||| || |||||||||||||| ||||||||||    
T  6716748 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggccaaccagactttatgattaaatcagaagggcacccctcactctcggtacac 6716847  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaata 226  Q
    |||||||| | ||||||||| ||||  ||||||||| |||||| |||| |||||||||| |||  |||  ||| ||||||| |||||||||||| ||| |    
T  6716848 cagagaaacatcaaatcaagccaaa-taagattgcagctagacaccgactcccgatctcaaagtaaaagtaactggcccaccgaaaaccagcacgcaaaa 6716946  T
Q  227 tgtaagacgaaagacat 243  Q
     ||||||| || |||||    
T  6716947 agtaagacaaatgacat 6716963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 43 - 372
Target Start/End: Complemental strand, 8745206 - 8744877
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaat 142  Q
    |||| ||||||| |||||||||||||||||||||||||||| | ||| ||||||| || ||| ||||||||||||||||| ||||||||||| |||| ||    
T  8745206 ctgaatcccgatctcgaatcaaaagtgatcggcccaccagaatttaggaccaaatcagaaggccacccctcaccctcggtgcaccagagaaacaccagat 8745107  T
Q  143 caagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaatatgtaagacgaaagaca 242  Q
    ||   ||||| || |||||| |||||| |||  | ||||||||||||| |||  ||||||||||| |||||||||||||||| | | | ||| || ||||    
T  8745106 cacaccaaac-aacattgcagctagacaccgccttccgatctcgaagcaaaagtaaccggcccaccgaaaaccagcacacaaaaagcatgacaaacgaca 8745008  T
Q  243 tggcatgc-gaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctccaaactccgtaaacacctaaaccacccgaa 341  Q
    ||  |||| |  ||   ||||||||| | ||||||| || |||||||||| ||||  ||| | |   ||||||||  ||||||||||| ||| |||  ||    
T  8745007 tgatatgcggtggtgcaaacaacaaatagatcaaaaggagaaggctcaactcaacaagactcgcttcctccaaacatcgtaaacaccttaacaaccgaaa 8744908  T
Q  342 gagcacaaacaagagctagtgacgacgaaca 372  Q
     | | |||||||| |||||||||||||||||    
T  8744907 aaacgcaaacaagggctagtgacgacgaaca 8744877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 44 - 389
Target Start/End: Original strand, 42533281 - 42533627
Alignment:
Q  44 tgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaatc 143  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||| || |||||||||||||||| || | ||||||||||| |||| |||    
T  42533281 tgactcccgatctcgaatcaaaagtgatcagcccaccagactttaggaccaaatcaggagggcacccctcacccccgatgcaccagagaaacaccacatc 42533380  T
Q  144 aagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaatatgtaagacgaaagacat 243  Q
      | ||||  |||| |||| || ||| | || ||||||||||||||| |||  ||||||||||  | | |||||||||||| | ||| ||| || ||||     
T  42533381 gcgccaaa-taagaatgcagctggacacagactcccgatctcgaagcaaaagtaaccggcccatcggagaccagcacacaaaaagtatgacaaacgacaa 42533479  T
Q  244 ggcatgc-gaagtttgaacaa-caaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctccaaactccgtaaacacctaaaccacccgaa 341  Q
    |  || | |  ||   ||||| |||||||||||||| |||||||||||  |||||| ||||| |   |||||| | || ||||||||| ||| |||| ||    
T  42533480 gagatacggtggtgcaaacaaccaaacaaatcaaaaggaaaaggctcagaacaacgggacacgcttcctccaaccaccttaaacaccttaacaacccaaa 42533579  T
Q  342 gagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacaga 389  Q
     | ||||||||||||| | |||||||||||||| ||||| ||||||||    
T  42533580 aatcacaaacaagagccaatgacgacgaacatggacccgagtaacaga 42533627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 13 - 221
Target Start/End: Original strand, 35745825 - 35746031
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| ||||||| ||||||||| ||||||| ||||| ||||| ||||||||||||||||| ||||| |||||| ||| || ||||||| |||||||||||    
T  35745825 aaagcccaaaaaccaacttgagccaaagagatgacttccgatctcgaatcaaaagtgatcagcccatcagactttagaacaaaattagtagggcacccct 35745924  T
Q  113 caccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaa 212  Q
    | ||| ||||||| ||||| || |||| |||||||||||| ||||||||  |||| | || | | ||||||||||||| |||  |||||| |||| ||||    
T  35745925 cgcccccggtacatcagag-aacaccatatcaagtcaaac-aagattgctgctagtcaccaacttccgatctcgaagcaaaagtaaccggtccaccgaaa 35746022  T
Q  213 accagcaca 221  Q
    |||| ||||    
T  35746023 accaacaca 35746031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 6584992 - 6584877
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| ||||||| |||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  6584992 aaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccct 6584893  T
Q  113 caccctcggtacacca 128  Q
    | ||  ||||||||||    
T  6584892 cgcctccggtacacca 6584877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 59 - 238
Target Start/End: Complemental strand, 44755663 - 44755486
Alignment:
Q  59 aatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagat 158  Q
    ||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||| || |||||||||||||||| ||||||||| |||||||||| ||    
T  44755663 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctca-ccacggtacaccagagaaacaccaaatcacgtcaaacaaa-at 44755566  T
Q  159 tgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaatatgtaagacgaaa 238  Q
     ||| |||||| |||| |||||| ||| |||| |||| ||  ||||||| |  ||||||||||||| | ||| |||||||    
T  44755565 agcagctagacaccgactcccgacctcaaagcaaaattaatgggcccaccgctaaccagcacacaaaaagtatgacgaaa 44755486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 27 - 190
Target Start/End: Complemental strand, 1320863 - 1320701
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| |||||| ||||||| |||||||||||||||||||||||||||| ||  ||||||| |  |||||||||||||||| || ||||     
T  1320863 aacttgagccaaagaactgacttccgattttgaatcaaaagtgatcggcccaccagactttatgaccaaatcaaaagggcacccctcacccccgatacat 1320764  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagc 190  Q
    |||||||| |||||||   | |||||||| ||| || |||||| || | |||||||||||||||    
T  1320763 cagagaaacaccaaattgcgccaaacaaa-attacagctagacaccaactcccgatctcgaagc 1320701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 24324810 - 24324956
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| ||||||  ||||||||||| ||||||||||| |||||||||||||| ||| ||  ||||||| || ||||||||||| | || ||||||||    
T  24324810 aacttgagccaaagaattgactcccgatctcgaatcaaaattgatcggcccaccaaactttaagaccaaatcagaagggcacccctaaaccccggtacac 24324909  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccga 174  Q
    || ||||| |||||||||   ||||| |||||||||||||||| ||||    
T  24324910 caaagaaacaccaaatcacaccaaac-aagattgcaactagacaccga 24324956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 27 - 387
Target Start/End: Complemental strand, 16954722 - 16954363
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    ||||||||||||||| ||||||  |||| ||||| ||||||||||||| | |||||||| ||| ||||||| || |||||||||||||||   | |||||    
T  16954722 aacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagactttaggaccaaatcagaagggcacccctcacctctgatacac 16954623  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaata 226  Q
    |||||||| ||||||||  | | ||| ||||||||| |||||| || | || |||||| ||||| |||  || |||||||  | ||||||||||||| ||    
T  16954622 cagagaaagaccaaatcgcg-ccaaccaagattgcagctagacaccaactctcgatctggaagcaaaagtaatcggcccatcggaaaccagcacacagta 16954524  T
Q  227 tgtaagacgaaagacatggcatgc-gaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctccaaactccgtaaac 325  Q
     ||| ||| || |||| |  |||| |  ||   ||||||||||| ||| ||| ||||||||||||| ||||| ||| | | | |||||||  || |||||    
T  16954523 agtatgacaaacgacaagatatgcagtggtgcaaacaacaaacatatccaaaggaaaaggctcaactcaacgagacccgctacctccaaaaaccctaaac 16954424  T
Q  326 acctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaaca 387  Q
    |||| || ||  |||| |   ||||| |||| |||||||||| |||| ||||||| ||||||    
T  16954423 accttaa-caatcgaaaaatgcaaactagagatagtgacgacaaacaagtacccgagtaaca 16954363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 16828948 - 16829064
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    ||||||||||||||| ||||||  |||| ||||| ||||||||||| ||| |||||||| ||| ||||||| || ||||||||||||||||  | |||||    
T  16828948 aacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcagccaaccagactttaggaccaaatcagaagggcacccctcacccctgatacac 16829047  T
Q  127 cagagaaaaaccaaatc 143  Q
     ||||||| ||||||||    
T  16829048 tagagaaacaccaaatc 16829064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 11379155 - 11379246
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaa 134  Q
    |||||||||||| |||||||||||| ||||||| |||||||||| |  |||||||||| ||||||||||  ||||||||| |||||||||||    
T  11379155 ctgactcccgatctcgaatcaaaagcgatcggctcaccagactacatgaccaaattagaagggcaccccaaaccctcggtccaccagagaaa 11379246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 3478436 - 3478259
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| |||||| | | |||||| |||||| || ||||||||| |||||||||||||||||||||||||| ||| ||| ||||||  || ||||||||||    
T  3478436 caaagcccaaaactaatcttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccaaactttaggaccaaaacagaagggcacccc 3478337  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagc 190  Q
    |||||| || |  || ||||||  |||  |||||| ||||| || |||||| |||| | |||| |||||||| ||||||    
T  3478336 tcacccccgatcaactagagaattaccctatcaagccaaaccaa-attgcagctagtcaccgactcccgatcccgaagc 3478259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 13311908 - 13311701
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||  |||||| |||||||||||| ||||||||||||||||||||||||||||||| |  ||||||  ||  |||||||||| | || |||| |||    
T  13311908 aacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactacatgaccaaaccagacgggcaccccttatccccggtccac 13311809  T
Q  127 cagagaaa-aaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaat 225  Q
    |||||||| ||| || || |||||||  |||| ||||  ||||| || | ||||||||||||||  |||  |  ||||||||   || |||||||||||     
T  13311808 cagagaaacaacgaagtc-agtcaaaataagaatgcagttagacaccaactcccgatctcgaaggaaaagtactcggcccaccagaatccagcacacaaa 13311710  T
Q  226 atgtaagac 234  Q
    |||||||||    
T  13311709 atgtaagac 13311701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 38485609 - 38485518
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaa 134  Q
    |||||||||||| ||||||||||||||||||||||||||||||  || || || | || ||||||||||| |||| | || |||||||||||    
T  38485609 ctgactcccgatctcgaatcaaaagtgatcggcccaccagacttcagaacaaattcagaagggcaccccttacccccagtccaccagagaaa 38485518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 46133306 - 46133397
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaa 134  Q
    |||||||||||| || ||||||||| ||||||| |||||||||  |||||||||| || ||||||| ||| |||  |||| |||||||||||    
T  46133306 ctgactcccgatctcaaatcaaaagcgatcggctcaccagacttcagcaccaaatcagaagggcactcctaacctccggtccaccagagaaa 46133397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 23983247 - 23983162
Alignment:
Q  44 tgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccaga 130  Q
    ||||||||||| |||||||||||  ||||| |||||||||||  |  |||||||||| | ||||||||||||||||||| |||||||    
T  23983247 tgactcccgatctcgaatcaaaaacgatcgacccaccagacttcaagaccaaattag-aaggcacccctcaccctcggtccaccaga 23983162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 9349801 - 9349760
Alignment:
Q  44 tgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  9349801 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 9349760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 17802833 - 17802885
Alignment:
Q  32 gagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagac 84  Q
    |||||||| ||||| || ||||| |||||||||||||||||||||||||||||    
T  17802833 gagtcaaaaagctggcttccgatctcgaatcaaaagtgatcggcccaccagac 17802885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 12480955 - 12480901
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccacca 81  Q
    |||||||  |||||| |||||||||||| |||||||||||| |||||||||||||    
T  12480955 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccacca 12480901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 44353561 - 44353623
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcgg 74  Q
    ||||| ||||||| |||| | ||||||||| |||||||||||| || ||||||||||||||||    
T  44353561 caaagcccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 44353623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 46262151 - 46262189
Alignment:
Q  47 ctcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  46262151 ctcccgatctcgaatcaaaagtgatcggcccaccagact 46262189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 9428128 - 9428186
Alignment:
Q  38 aagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaa 96  Q
    |||| |||||| | ||| |||||||||||||||||||| |||||||||| || ||||||    
T  9428128 aagaactgacttctgatctcgaatcaaaagtgatcggctcaccagactacaggaccaaa 9428186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 27993568 - 27993606
Alignment:
Q  47 ctcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  27993568 ctcccgatctcgaatcaaaagtgatcggtccaccagact 27993606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 35206725 - 35206763
Alignment:
Q  47 ctcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  35206725 ctcccgatctcggatcaaaagtgatcggcccaccagact 35206763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 280; Significance: 1e-156; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 18 - 405
Target Start/End: Complemental strand, 30964519 - 30964132
Alignment:
Q  18 ccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccc 117  Q
    ||||||| |||||||||||||||| | ||||||||||  |||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||    
T  30964519 ccaaaaaccaacttgagtcaaagaacggactcccgatcacgaatcaaaagtgatcggcccatcagattatagtaccaaattagcagggcacccctcgccc 30964420  T
Q  118 tcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||  |||||||||    
T  30964419 tcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgacttccgatctcgaagccaaatgaaccggcccatcgaaaaccag 30964320  T
Q  218 cacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctccaaact 317  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||  |||||||||    
T  30964319 cacacaataagtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggttcaacacaacgtgacacgcaccctccaaact 30964220  T
Q  318 ccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaagga 405  Q
    ||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  30964219 ccgcaaacacctaaaccacccaaaaagcacaaacaatagctagtgacgacgaacatggacccgtgtaacagaggttgcttttaaagga 30964132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 12 - 408
Target Start/End: Complemental strand, 8255111 - 8254715
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| |||||||||||||||| |||||| | ||| ||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  8255111 caaagcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccc 8255012  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||| ||| ||||||||||||||||||| |||||||||||| |||    
T  8255011 tcgcccccggtacaccagagaaaaaccaaatcaagtgaaacaaagattacagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccgaa 8254912  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||||||| | ||||| ||  ||     
T  8254911 aaccaacacacaatatgtaagacgaaagacatggcatgcaaagtttaaacaacaaacgaatcaaaaggaaaaggctcaacacaaagcgacacgcaccctt 8254812  T
Q  312 caaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||| ||||||||||||||||||| |  | |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||| ||||    
T  8254811 caaactcggtaaacacctaaaccacccaacaatcacaaacaagagctagtgacgacgaacatggacccgtgtaacaaaggttgcttccaaagaaaat 8254715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 12 - 408
Target Start/End: Complemental strand, 8268529 - 8268133
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| |||||||||||||||| |||||| | ||| ||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  8268529 caaagcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccc 8268430  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||| ||| ||||||||||||||||||| |||||||||||| |||    
T  8268429 tcgcccccggtacaccagagaaaaaccaaatcaagtgaaacaaagattacagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccgaa 8268330  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||||||| | ||||| ||  ||     
T  8268329 aaccaacacacaatatgtaagacgaaagacatggcatgcaaagtttaaacaacaaacgaatcaaaaggaaaaggctcaacacaaagcgacacgcaccctt 8268230  T
Q  312 caaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||| ||||||||||||||||||| |  | |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||| ||||    
T  8268229 caaactcggtaaacacctaaaccacccaacaatcacaaacaagagctagtgacgacgaacatggacccgtgtaacaaaggttgcttccaaagaaaat 8268133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 20 - 408
Target Start/End: Complemental strand, 4305801 - 4305413
Alignment:
Q  20 aaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctc 119  Q
    ||||| ||||||||| |||||| || ||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||  ||| |    
T  4305801 aaaaaccaacttgagacaaagaactaactcccgatctcgaatcaaaagtgatcgccccaccagactatagtaccaaattagcagggcaccgcttgccccc 4305702  T
Q  120 ggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagca 219  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |    
T  4305701 ggtacaccagagaaaaacgaaatccagtcaaacaaagattgcaactagcccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaaccagta 4305602  T
Q  220 cacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctccaaactcc 319  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||||||||| | ||| |||||||||||||||||||||||||  |   ||||||| ||    
T  4305601 cacaatatgtaagacaaaagacatggcaagcgaagtttaaacaacaaacaaaactaaaggaaaaggctcaacacaacgtgacacgaaccttccaaacacc 4305502  T
Q  320 gtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    | ||||||| |||| |||| || |||||||||||||||||||||||||||||||| | || |||||||||  |||||||||||||||||    
T  4305501 gaaaacacccaaacaacccaaaaagcacaaacaagagctagtgacgacgaacatggatccatgtaacagatattgcttctaaaggaaat 4305413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 18 - 188
Target Start/End: Original strand, 30167567 - 30167736
Alignment:
Q  18 ccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccc 117  Q
    |||||||||||||||||||||||| | |||||||||| |||||||||||||||||| |||||  |||||||  |||||||  ||||||||||||||||||    
T  30167567 ccaaaaatcaacttgagtcaaagaaccgactcccgatctcgaatcaaaagtgatcgacccacttgactataataccaaataggcagggcacccctcaccc 30167666  T
Q  118 tcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaa 188  Q
     ||| ||| || |||||| | ||||||| |||||||||||||| | ||||||||||| |||||||||||||    
T  30167667 -cggcacatcaaagaaaacctaaatcaaatcaaacaaagattgtagctagaccccgactcccgatctcgaa 30167736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 27 - 224
Target Start/End: Original strand, 22811172 - 22811367
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| |||||||||||| |||||| |||| |||||||||||||||||| ||  ||||||| || ||||||| |||||||| || |||||    
T  22811172 aacttgagccaaagaactgactcccgatctcgaataaaaaatgatcggcccaccagactttaagaccaaatcagaagggcactcctcaccc-cgatacac 22811270  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaa 224  Q
    |||||||| |||||||||   |||||||| ||||||||||||| || | | ||||||||||||| |||  ||||| ||||| ||||||||||||||||    
T  22811271 cagagaaacaccaaatcacaccaaacaaa-attgcaactagacaccaagttccgatctcgaagcaaaagtaaccgacccaccgaaaaccagcacacaa 22811367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 27 - 224
Target Start/End: Complemental strand, 25753241 - 25753045
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| |||||||||||| |||||||||||||||||| ||||||||||| ||| ||||||| ||  |||||| |||||||  ||||||||    
T  25753241 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgccccaccagactttaggaccaaataagacgggcactcctcacctccggtacac 25753142  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaa 224  Q
    |||||||| |||| |||| | ||||| ||||||||| |||||| |||| ||||||||||||||| |||| || | |||||  | ||||||||| ||||    
T  25753141 cagagaaacaccacatcacgccaaac-aagattgcagctagacaccgactcccgatctcgaagcaaaattaagctgcccatcggaaaccagcaaacaa 25753045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 27 - 207
Target Start/End: Original strand, 53823433 - 53823612
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| |||||||||||| |||||||||||||||| || |||||||||| ||  ||||||| || |||||||||||||||  ||||||||    
T  53823433 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgattggtccaccagactttatgaccaaatcagaagggcacccctcacctccggtacac 53823532  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccac 207  Q
    |||||||| ||||| ||||| ||| | |||||||||  ||||| |||| ||||||||||||||| |||  |||||||||||    
T  53823533 cagagaaacaccaagtcaagccaagc-aagattgcagttagacaccgactcccgatctcgaagcaaaagtaaccggcccac 53823612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 44 - 190
Target Start/End: Original strand, 39421042 - 39421187
Alignment:
Q  44 tgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaatc 143  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||  |||| || || |||||||||||||||||| |||||  ||||||| ||||||||    
T  39421042 tgactcccgatctcgaatcaaaagtgatcggcccaccaggctataagaccatatcagaagggcacccctcaccctcagtacattagagaaacaccaaatc 39421141  T
Q  144 aagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagc 190  Q
    | | ||||| ||||||||| |||||| |||| |||||||||||||||    
T  39421142 acgccaaac-aagattgcagctagacaccgattcccgatctcgaagc 39421187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 36 - 407
Target Start/End: Original strand, 31050683 - 31051053
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaa 135  Q
    |||||| || ||| ||||| |||||||||||||||||||||||||||||| ||| ||||||| || |||||||||||| ||| ||||||| || || ||     
T  31050683 caaagacctaacttccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagtagggcacccctcgcccccggtacatcaaag-aac 31050781  T
Q  136 accaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaatatgtaagacg 235  Q
    |||| |||||||||||| | ||||||| |||| | |||| ||||| ||||||||| |||  ||||||||||| | |||||| |||| |||| | |||||     
T  31050782 accatatcaagtcaaac-aggattgcagctagtcaccgactcccggtctcgaagcaaaagtaaccggcccaccggaaaccaacacataataagcaagaca 31050880  T
Q  236 aaagacatggcatgc-gaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctcc-aaactccgtaaacacc-taaa 332  Q
     | ||||||  | || |  ||   ||| || |||| ||||||| ||| || |||| ||||||| || || ||  |||| ||||||| |||||||| ||||    
T  31050881 gacgacatgataagcggtggtgcaaacgacgaacacatcaaaaggaagagactcatcacaacggga-acgcaccctccaaaactccctaaacaccttaaa 31050979  T
Q  333 ccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaa 407  Q
    | |||| || || || ||||||||||||||||||||||| || ||||||||| |||||| ||| || ||||||||    
T  31050980 caacccaaaaag-accaacaagagctagtgacgacgaacgtggacccgtgtaccagaggctgcctccaaaggaaa 31051053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 2825866 - 2825691
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| ||||||| ||  ||||| ||||||| ||| ||||||| ||||||||||| ||||||||||||| |||| ||| ||||||| ||||| ||||||||    
T  2825866 aaagcccaaaaaccacattgagccaaagaggtgattcccgatctcgaatcaaaaatgatcggcccaccggactttagaaccaaatcagcagagcacccct 2825767  T
Q  113 caccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagc 190  Q
    | ||||||||||||||||| || |||| |||||||||||| | ||||||| |||||| || | || | ||||||||||    
T  2825766 cgccctcggtacaccagag-aacaccatatcaagtcaaac-atgattgcagctagacaccaactctcaatctcgaagc 2825691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 27 - 207
Target Start/End: Original strand, 19815236 - 19815415
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| |||||||| ||| |||||| |||||| ||||| |||||||||| ||| ||||||  || |||||||||||||||| ||||  ||    
T  19815236 aacttgagccaaagaactgactcctgatctcgaataaaaagtaatcggtccaccagactttaggaccaaaacagaagggcacccctcacccccggtcaac 19815335  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccac 207  Q
    |||| ||| || | |||||| ||||| ||||||||| |||||| |||| || |||||||||||| |||  ||| |||||||    
T  19815336 cagaaaaatacaatatcaagccaaac-aagattgcagctagacaccgactctcgatctcgaagcaaaagtaactggcccac 19815415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 18 - 408
Target Start/End: Complemental strand, 19673178 - 19672790
Alignment:
Q  18 ccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccc 117  Q
    |||||| | |||||||| |||||| |||||||| ||| |||||| ||||| ||  || |||||||||| ||| ||||||  || ||||||||||||||||    
T  19673178 ccaaaactaaacttgagccaaagaactgactcctgatctcgaat-aaaagggaatggtccaccagactttaggaccaaaacagaagggcacccctcaccc 19673080  T
Q  118 tcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccag 217  Q
     || |  |||||||||| | || |||||| ||||| ||||||||| |||||| | || ||||||||||||||| |||  ||||||||||| | ||| ||     
T  19673079 ccgatcaaccagagaaatatcatatcaagccaaac-aagattgcagctagacactgactcccgatctcgaagcaaaagtaaccggcccactggaaatcaa 19672981  T
Q  218 cacacaatatgtaagacgaaagacatggcatgc-gaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctcc-aaa 315  Q
    | |  |||| | ||||| ||  |||||  |||| |  ||   ||| |||||| |||||||| ||||||||||| | ||||| ||||| ||  | || |||    
T  19672980 cgcgaaataagcaagacaaacaacatgatatgcggtggtgcaaacgacaaac-aatcaaaaggaaaaggctcatctcaacgagacacgcaccccccaaaa 19672882  T
Q  316 ctccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
     ||| ||||||||| ||| |||| || | ||| |||||||||||||| ||||||||||| | ||||||||| |||| ||| || |||||||||    
T  19672881 ttccctaaacaccttaacaaccc-aaaaacaccaacaagagctagtggcgacgaacatggatccgtgtaacggaggatgcctccaaaggaaat 19672790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 46698797 - 46698904
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||  |||||| |||||||||||| ||||||||||||  ||||||||||||||||| || ||||||| || |||||||||| |||||||||| |||    
T  46698797 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagactacaggaccaaatcagaagggcaccccacaccctcggtccac 46698896  T
Q  127 cagagaaa 134  Q
    || |||||    
T  46698897 caaagaaa 46698904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 2061759 - 2061857
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaa 134  Q
    |||||| ||||||| | || ||||||||||||||||| |||||||||||| ||| | ||||| |  ||||||||||||||| ||| |||||||||||||    
T  2061759 caaagaactgactctcaatctcgaatcaaaagtgatcagcccaccagactttaggatcaaatcaagagggcacccctcaccttcgatacaccagagaaa 2061857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 43 - 144
Target Start/End: Complemental strand, 48098386 - 48098285
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaat 142  Q
    |||||||||||| ||||| |||||||||| |||||| | | || ||  ||||||| || |||||||| ||||||||||||||||| |||||| |||||||    
T  48098386 ctgactcccgatctcgaaacaaaagtgataggcccatcgggctttatgaccaaatcagaagggcacctctcaccctcggtacacctgagaaacaccaaat 48098287  T
Q  143 ca 144  Q
    ||    
T  48098286 ca 48098285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 21387216 - 21387321
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    ||||||| || |||| |||||| ||||| ||||||||||||||||||| ||||||||||  |||||||||| || |||| |  |||||||| || | |||    
T  21387216 aacttgaatcgaagaactgacttccgatctcgaatcaaaagtgatcggtccaccagactccagcaccaaatcagaagggtattcctcacccccgatccac 21387315  T
Q  127 cagaga 132  Q
    ||||||    
T  21387316 cagaga 21387321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 36962627 - 36962685
Alignment:
Q  26 caacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| ||||||||||||||||    
T  36962627 caacttgagtcaaaga-ctgactcctgatctcgaatcaaaagtaatcggcccaccagact 36962685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 49747586 - 49747480
Alignment:
Q  37 aaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaa 136  Q
    ||||| ||||||| |||| || ||||||||||||||||| ||||||||| ||| ||||||| |  ||||| ||  ||||||| |||||| |||||||| |    
T  49747586 aaagaactgactctcgatctcaaatcaaaagtgatcggctcaccagactttagaaccaaatcaaaagggcgccattcaccct-ggtacatcagagaaaca 49747488  T
Q  137 ccaaatca 144  Q
    ||||||||    
T  49747487 ccaaatca 49747480  T

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Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 204
Target Start/End: Original strand, 6599957 - 6600134
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    ||||||| ||||||| | |||||||||| || ||||||||| ||||||||||||||||| |||  |||||| || | ||  | |||||| |||| | |||    
T  6599957 aacttgaatcaaagaaccgactcccgatctctaatcaaaagcgatcggcccaccagactctagagccaaatcagtaaggtcctcctcacgctcgatccac 6600056  T
Q  127 cagagaa-aaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcc 204  Q
    |  |||| | |||| | | || ||||| |||||||||||||||| || | |||||||||| |||| |||| ||||||||    
T  6600057 cgaagaagacaccataactagccaaac-aagattgcaactagacaccaactcccgatctcaaagcaaaattaaccggcc 6600134  T

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Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 38637261 - 38637350
Alignment:
Q  44 tgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaa 134  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||   |||||  || ||||||||| |||||   |||||||||||||||    
T  38637261 tgactcccgatctcgaatcaaaagtgatcggcccgccagactatatgcccaaa-aaggagggcacccatcacctctggtacaccagagaaa 38637350  T

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Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 38929896 - 38929790
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| |||||||  ||| ||||||||||||||||||||||| ||||||  || ||| ||  ||  |||||||||| |||| |||| |||    
T  38929896 aacttgagccaaagaactgactcttgatctcgaatcaaaagtgatcggcccagcagacttcaggacccaaccagacgggcaccccttacccccggtccac 38929797  T
Q  127 cagagaa 133  Q
    |||||||    
T  38929796 cagagaa 38929790  T

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Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 16501791 - 16501746
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccacca 81  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||    
T  16501791 caaagagctgactcccgatctcgaatcaaaagcgatcggcccacca 16501746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 35341336 - 35341391
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagt 68  Q
    |||||||||||| ||||||||| ||||||||||||| ||||| ||| |||||||||    
T  35341336 aaaggccaaaaaccaacttgagccaaagagctgacttccgatctcggatcaaaagt 35341391  T

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Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 39041285 - 39041344
Alignment:
Q  26 caacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    ||||||||||| |  | |||||||| ||| ||||||||||||||||||||||||||||||    
T  39041285 caacttgagtctagaaactgactcctgatctcgaatcaaaagtgatcggcccaccagact 39041344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 40813813 - 40813851
Alignment:
Q  47 ctcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  40813813 ctcccgatctcgaatcaaaagtgatcggcccaccagact 40813851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 19311371 - 19311460
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaa 134  Q
    |||||||||| | |||||||||||||||||| ||||||||||| ||  ||||||| || ||| |||||||||||| || |||| || |||||    
T  19311371 ctgactcccg-tctcgaatcaaaagtgatcgacccaccagact-taaaaccaaatcagaaggacacccctcacccccgttacatcatagaaa 19311460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 35800550 - 35800452
Alignment:
Q  35 tcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaa 134  Q
    ||||||| |||||| ||||| |||||||||||| ||||||  |||||||||  || ||||||| || |||||||| || |||| || | |||||||||||    
T  35800550 tcaaagaactgacttccgatctcgaatcaaaagcgatcggttcaccagacttcagaaccaaatcagaagggcaccacttaccc-cgatccaccagagaaa 35800452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 85
Target Start/End: Complemental strand, 53756802 - 53756767
Alignment:
Q  50 ccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    ||||| ||||||||||||||||||||||||||||||    
T  53756802 ccgatctcgaatcaaaagtgatcggcccaccagact 53756767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 2792286 - 2792344
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    ||||||||||||  | |||||| ||||| ||||||||||||||||||||| || |||||    
T  2792286 aacttgagtcaagaaactgacttccgatctcgaatcaaaagtgatcggcctactagact 2792344  T

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Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 85
Target Start/End: Original strand, 37707396 - 37707425
Alignment:
Q  56 tcgaatcaaaagtgatcggcccaccagact 85  Q
    ||||||||||||||||||||||||||||||    
T  37707396 tcgaatcaaaagtgatcggcccaccagact 37707425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 270; Significance: 1e-150; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 11 - 408
Target Start/End: Complemental strand, 20611868 - 20611471
Alignment:
Q  11 gcaaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcaccc 110  Q
    |||||| ||||||| |||||| ||||||||| |||||||||||| ||||||||||| ||||||||||| || ||||||| || |||||||||||||||||    
T  20611868 gcaaagcccaaaaaccaacttaagtcaaagaactgactcccgatctcgaatcaaaaatgatcggcccaacaaactatagtacgaaattagcagggcaccc 20611769  T
Q  111 ctcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacgga 210  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| |||||||||||| ||||| ||    
T  20611768 ctcgcccccggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcctgatctcgaaaccaaatgaaccgacccaccga 20611669  T
Q  211 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatct 310  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||  ||    
T  20611668 aaaccagcacacaatatgtaagacgaaaaacatagcatgcgaagtttgaacaataaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccct 20611569  T
Q  311 ccaaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||| ||||||||||||||| |||| || ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||    
T  20611568 ccaaacttcgtaaacacctaaactacccaaaaagcacaaacaagagctagtaacgacaaacatggacccgtgtaacagaggttgcttctaaaggaaat 20611471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 12 - 408
Target Start/End: Original strand, 34475751 - 34476146
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| |||||||||||||| | || ||||  ||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  34475751 caaagcccaaaaatcaacttaattccaagatttgactcccgatctcgaatcaaaagtgatcggcccaccagactatagaaacaaattagcagggcacccc 34475850  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| |||||||||||||||||| |||| ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||| |||||||  |||    
T  34475851 tcgcccccggtacaccagagaaaaatcaaaccaagtcaaacaaaaattgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaa 34475950  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||||| ||  |||    
T  34475951 aaccagcacacgatatgtaagacaaaagacaaggcatgcgaagtttaaacaacaaacaaatccaaaggaaaaggctcaa-acaacgtgacacccaccctc 34476049  T
Q  312 caaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||||||||||||||||||||| | || |||||||||||||||||| ||||||||||||| |||||||||||| ||||||||| | ||||||||    
T  34476050 caaactccgtaaacacctaaaccactcaaaaagcacaaacaagagctagagacgacgaacatggacccgtgtaacataggttgctttttaaggaaat 34476146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 13 - 408
Target Start/End: Complemental strand, 19176585 - 19176191
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| ||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |    
T  19176585 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaattagcagggcaccc-t 19176487  T
Q  113 caccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaa 212  Q
    ||| | ||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||||||| ||||| |||||| ||||    
T  19176486 cactcccggtacatcagagaaaaaccaaattaagtcaaacaaagattgcagctagaccccgactcctgatctcgaagccaaaggaaccagcccaccgaaa 19176387  T
Q  213 accagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctcc 312  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||| | |||||||||||||| || ||||| |||| |||||| | |||||||   ||||    
T  19176386 accagcacacaataagtaagaggaaagacatggcatgtgaagtttaaccaacaaacaaatcacaaggaaaaagctccacacaaagggacacactccctcc 19176287  T
Q  313 aaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||||||||||||||||||| || ||  ||||||||||||||||||||||| |||||   |||||||||||| ||||| |||| |||||||||    
T  19176286 aaactccgtaaacacctaaaccatccaaaaggcacaaacaagagctagtgacgatgaacaaagacccgtgtaacaaaggttacttccaaaggaaat 19176191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 83 - 408
Target Start/End: Complemental strand, 47235729 - 47235403
Alignment:
Q  83 actatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgat 182  Q
    |||||||  |||||||||||||||||||||| ||| ||||||||  ||||||||||||| |||||||||||||||||||| |||||||| || |||||||    
T  47235729 actatagtcccaaattagcagggcacccctcgcccccggtacactggagaaaaaccaaaccaagtcaaacaaagattgcagctagaccctgactcccgat 47235630  T
Q  183 ctcgaagccaaatgaaccggcccacggaaaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaa 282  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||    
T  47235629 ctcgaagccaaatgaaccggcccatcgaaaaccagcacacattatgtaagacgaaagacatggcgtgcgaagtttaaacaacaaacaaatcaaaaggaaa 47235530  T
Q  283 aggctcaacacaacgtgacacacaatctccaaactccgtaaacacctaaaccaccc-gaagagcacaaacaagagctagtgacgacgaacatgtacccgt 381  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||  || | |||||||||||||||| ||||| ||||||| ||||||    
T  47235529 aggctcaacacaacgtgacacgcaccctccaaactccgtaaacacctaaaccacccaaaaaaacacaaacaagagctagagacgatgaacatggacccgt 47235430  T
Q  382 gtaacagaggttgcttctaaaggaaat 408  Q
    |||||| ||||||||||||||||||||    
T  47235429 gtaacaaaggttgcttctaaaggaaat 47235403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 12 - 408
Target Start/End: Complemental strand, 45163939 - 45163536
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccacc--agactatagcaccaaattagcagggcacc 109  Q
    ||||| ||||||| |||||| || |||| | |||||| | ||| ||||||||||||||||||||||||   ||||||||| |||||||||||||||||||    
T  45163939 caaagcccaaaaaccaacttaagacaaaaaactgacttctgatctcgaatcaaaagtgatcggcccacacaagactatagtaccaaattagcagggcacc 45163840  T
Q  110 cctcaccctcggtaca----ccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggccc 205  Q
    |||| |||||||||||    | ||||||||| |||| |||||||||||||||||||| ||||||||||| | ||||||| |||||||||||||||||||     
T  45163839 cctcgccctcggtacatgcactagagaaaaatcaaaccaagtcaaacaaagattgcagctagaccccgacttccgatcttgaagccaaatgaaccggcct 45163740  T
Q  206 acggaaaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacac 305  Q
    |   ||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||| || ||| ||||||||| |||||| | |    
T  45163739 atcaaaaaccagcacacaatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaataaaaaggacaagactcaacacagcgtgacgcgc 45163640  T
Q  306 aatctccaaactccgtaaacacctaaaccaccc-gaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaagg 404  Q
    || | | |||||| ||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||| |||||||||||| || |||||||||||||    
T  45163639 aacccctaaactcggtaaacacctaaaccacccagaaaagcacaaacaagagttagagacgacgaacatggacccgtgtaacaaagattgcttctaaagg 45163540  T
Q  405 aaat 408  Q
    ||||    
T  45163539 aaat 45163536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 18 - 408
Target Start/End: Original strand, 2394256 - 2394651
Alignment:
Q  18 ccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccc 117  Q
    ||||||| |||||| || |||||| |||||| || || ||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||| |||    
T  2394256 ccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccctcgccc 2394355  T
Q  118 tcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccag 217  Q
     ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||| ||||  |||||||||    
T  2394356 ccggtacaccagagtaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaaaaccag 2394455  T
Q  218 cacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgaca----cacaatctcca 313  Q
    ||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| || ||| |||| |||| |||||||    | |   | |||    
T  2394456 cacacaatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaatcaaaaggacaagactcaccacagcgtgacacccccccccccccca 2394555  T
Q  314 aactccgtaaacacctaaaccacc-cgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||||||||||||||||||||  ||| |||| ||||||||| ||| |||||| || ||| |||| ||||||| ||||||||||| ||||||||    
T  2394556 aactccgtaaacacctaaaccaccaagaaaagcataaacaagagttagagacgacaaatatggacccatgtaacaaaggttgcttcttaaggaaat 2394651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 12 - 294
Target Start/End: Original strand, 2392503 - 2392785
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| |||||| || |||||| |||||| || || ||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  2392503 caaagcccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccc 2392602  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    || ||| ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||| ||||  |||    
T  2392603 tcgcccccggtacaccagagtaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaa 2392702  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacaca 294  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| || ||| |||| ||||    
T  2392703 aaccagcacacaatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaatcaaaaggacaagactcaccaca 2392785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 19 - 236
Target Start/End: Original strand, 23328354 - 23328567
Alignment:
Q  19 caaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccct 118  Q
    |||||| ||||||||| |||| |||| ||||||||| ||||||||||||||||||| |||||| ||| ||| ||||||| | ||||||||||||| |||     
T  23328354 caaaaaccaacttgagccaaaaagctaactcccgatctcgaatcaaaagtgatcggtccaccaaactttagaaccaaatcaacagggcacccctcgcccc 23328453  T
Q  119 cggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagc 218  Q
    ||||||||||||| || |||| ||||||||||||||| |||||| |||||| || | ||||||||||||||| |||  ||||||||||  | | ||||||    
T  23328454 cggtacaccagag-aacaccatatcaagtcaaacaaa-attgcagctagacaccaactcccgatctcgaagcaaaa--aaccggcccatcggacaccagc 23328549  T
Q  219 acacaatatgtaagacga 236  Q
    ||||||||||||||||||    
T  23328550 acacaatatgtaagacga 23328567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 36 - 224
Target Start/End: Original strand, 14755286 - 14755471
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaa 135  Q
    |||||| |||||||||||| | |||||||||||||||||||||||||||| |||||| |||  |  ||||||||||||||| |||||||||||||||||     
T  14755286 caaagaactgactcccgatcttgaatcaaaagtgatcggcccaccagactttagcacaaaa--aaaagggcacccctcaccttcggtacaccagagaaac 14755383  T
Q  136 accaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaa 224  Q
    |||||| |  |  |||| ||||||||| |||||  |||| ||||||||||||||| |||  ||||||||||  | ||| ||||||||||    
T  14755384 accaaaacgcgcgaaac-aagattgcagctagataccgactcccgatctcgaagcaaaagtaaccggcccatcggaaatcagcacacaa 14755471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 13 - 244
Target Start/End: Original strand, 40023570 - 40023799
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| ||||||| |||||| || ||||||   |||||||||| ||||||||||||||||||| |||||||||| ||  || |||| ||||||||| ||||    
T  40023570 aaagcccaaaaaccaacttaagccaaagaatcgactcccgatctcgaatcaaaagtgatcggtccaccagactttaaaacaaaatcagcagggca-ccct 40023668  T
Q  113 caccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaa 212  Q
    | ||| |||||||| |||| || |||| |||||||||||  | ||||||| |||||| || | | ||||||||||||| |||  |||||| |||| | |     
T  40023669 cgcccccggtacactagag-aacaccatatcaagtcaaaacatgattgcagctagacaccaacttccgatctcgaagcaaaaataaccggtccaccggac 40023767  T
Q  213 accagcacacaatatgtaagacgaaagacatg 244  Q
    ||||  |||||||||||||||||| |||||||    
T  40023768 accaatacacaatatgtaagacgatagacatg 40023799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 25647734 - 25647557
Alignment:
Q  46 actcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaatcaa 145  Q
    ||||||||| |||||||||||||||| |||||  |||||| ||| ||||||| || ||||||||| |||| | |||||||||||||||| |||||||||     
T  25647734 actcccgatctcgaatcaaaagtgataggcccgtcagactttaggaccaaatcagaagggcacccttcactcccggtacaccagagaaacaccaaatcac 25647635  T
Q  146 gtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaa 224  Q
    | |||||| | |||||| |||||| |||| ||||| ||||||||| |||  ||||||||||  | |||||| |||||||    
T  25647634 gccaaacaga-attgcagctagacaccgactcccgttctcgaagcaaaagtaaccggcccatcggaaaccaacacacaa 25647557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 37123442 - 37123289
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaa 135  Q
    |||||| ||||||||| || |||||||||||||||||||||||||| | | ||| ||||||  |  |||||||||||| || |||||||| ||||||||     
T  37123442 caaagaactgactcccaatctcgaatcaaaagtgatcggcccaccaaaatttaggaccaaaacataagggcacccctctccttcggtacatcagagaaac 37123343  T
Q  136 accaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagc 190  Q
    ||||||||| | |||||||| |||||| |||||| |||| |||||||||||||||    
T  37123342 accaaatcacgccaaacaaa-attgcagctagacaccgactcccgatctcgaagc 37123289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 17551041 - 17550965
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactata 88  Q
    ||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  17551041 caaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactata 17550965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 4464013 - 4464132
Alignment:
Q  92 ccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagcc 191  Q
    |||||| || ||||||||||||||||||||||||| ||||||| ||||||||| | || |||| |||||||||||||| |||| |||||||||||||||     
T  4464013 ccaaatcagaagggcacccctcaccctcggtacac-agagaaacaccaaatcacgccacacaa-gattgcaactagacaccgactcccgatctcgaagca 4464110  T
Q  192 aaatgaaccggcccacggaaaa 213  Q
    |||  ||||||||||| |||||    
T  4464111 aaagtaaccggcccaccgaaaa 4464132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 43012452 - 43012372
Alignment:
Q  19 caaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaatta 99  Q
    |||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||| ||| |||||||||    
T  43012452 caaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgggccaccagactttagaaccaaatta 43012372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 9584051 - 9584173
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcaccc-c 111  Q
    |||| ||||||| || |||||| |||||| |||||||||||| ||||||||||||||||||  |||||||||| ||| | |||||||||||||||||| |    
T  9584051 aaagcccaaaaaccatcttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagactttagtatcaaattagcagggcaccctc 9584150  T
Q  112 tcaccctcggtacaccagagaaaa 135  Q
    || ||| |||||||| ||||||||    
T  9584151 tc-cccccggtacacaagagaaaa 9584173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 27 - 190
Target Start/End: Complemental strand, 14194009 - 14193846
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| | ||||||| || ||||||||||||||||||| || ||||||| ||| ||||||| || |||||||||||||| | ||||||||    
T  14194009 aacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagactttaggaccaaatcagaagggcacccctcactcccggtacac 14193910  T
Q  127 cagagaa-aaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagc 190  Q
    || |||| | ||||||||| | ||| || | |||| | |||||| |||| ||||||| |||||||    
T  14193909 caaagaacacaccaaatcacgccaagcaga-attgtagctagacaccgactcccgatatcgaagc 14193846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 45398879 - 45398779
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| ||||||| |||||| | ||||||||||||||| |||| ||||||||||||||||||| |||||||||| ||   |||||| ||||||||||||||    
T  45398879 aaagcccaaaaaccaacttaaatcaaagagctgactctcgatctcgaatcaaaagtgatcggtccaccagactttaaatccaaatcagcagggcacccct 45398780  T
Q  113 c 113  Q
    |    
T  45398779 c 45398779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 43 - 207
Target Start/End: Original strand, 823463 - 823626
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaat 142  Q
    ||||||| |||| |||||||||||||||||||||||  || ||  |  |||||||| | ||||||||| | |||| |||| ||||||||||| |||| |     
T  823463 ctgactctcgatctcgaatcaaaagtgatcggcccattagtcttcataaccaaatttgaagggcaccctttacccacggtccaccagagaaacaccataa 823562  T
Q  143 caagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccac 207  Q
    |||| ||||| |||||||||||||||| || | ||| ||||| ||||| |||| |||||| ||||    
T  823563 caagccaaac-aagattgcaactagacaccaactcctgatcttgaagcaaaattaaccggtccac 823626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 31482968 - 31482868
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| |||||||||||||| | |  ||||  ||| ||||||| ||||||||||||||||| |||| ||||||||||| |||||||||| |||| |||||    
T  31482968 caaagcccaaaaatcaacttaattttaagatttgattcccgatctcgaatcaaaagtgatccgcccgccagactatagaaccaaattagtagggtacccc 31482869  T
Q  112 t 112  Q
    |    
T  31482868 t 31482868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 14879486 - 14879415
Alignment:
Q  45 gactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcacc 116  Q
    |||||||||| |||||||||||||||||||||||||||||| ||| ||| ||| || ||||||||| |||||    
T  14879486 gactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacccaatcagaagggcacccgtcacc 14879415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 5556639 - 5556532
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||  |||||| |||||||||||| |||||||||||| ||||| |||||||||||| |  ||||||| |  ||||||||||  || |||||| |||    
T  5556639 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgccccaccagactacaagaccaaatcaaaagggcaccccaaacactcggtccac 5556540  T
Q  127 cagagaaa 134  Q
     |||||||    
T  5556539 gagagaaa 5556532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 47945775 - 47945668
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctc-ggtaca 125  Q
    |||||||| |||| | |||||||||||| ||||||||||||||||||||||||| |||| ||| ||| ||  ||  |||||||||| |||| | ||| ||    
T  47945775 aacttgagccaaataactgactcccgatctcgaatcaaaagtgatcggcccaccggactttaggacccaaccagacgggcaccccttaccccctggtcca 47945676  T
Q  126 ccagagaa 133  Q
    ||||||||    
T  47945675 ccagagaa 47945668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 30127332 - 30127273
Alignment:
Q  27 aacttgagtcaa-agagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||||||| ||| |||||||||||| |||||||||||| ||||||| |||||||||    
T  30127332 aacttgagtcaagagaactgactcccgatctcgaatcaaaagcgatcggctcaccagact 30127273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 20710740 - 20710778
Alignment:
Q  47 ctcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  20710740 ctcccgatctcgaatcaaaagtgatcggcccaccagact 20710778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 24099355 - 24099397
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||| ||||||| ||||||||||||||||||||||||||||||    
T  24099355 ctgattcccgatatcgaatcaaaagtgatcggcccaccagact 24099397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 33143970 - 33144019
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||| |||||||||||| ||||||||||||||||||  ||||||||||    
T  33143970 caaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagact 33144019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 39021297 - 39021342
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccacca 81  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||    
T  39021297 caaagaactgactcccgacctcgaatcaaaagtgatcggcccacca 39021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 30935421 - 30935509
Alignment:
Q  46 actcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaa 134  Q
    ||||||||| | |||||||||| |||| |||||||| |||  |  ||||||| || ||||||||||| |||| |||| |||||||||||    
T  30935421 actcccgatcttgaatcaaaagcgatcagcccaccaaacttcaaaaccaaatcagaagggcaccccttacccccggtccaccagagaaa 30935509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 19295877 - 19295935
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    ||||||||||||  | || ||| ||||| |||||||||||||||| |||||||||||||    
T  19295877 aacttgagtcaagaaactaacttccgatatcgaatcaaaagtgataggcccaccagact 19295935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 345 - 391
Target Start/End: Complemental strand, 37123141 - 37123095
Alignment:
Q  345 cacaaacaagagctagtgacgacgaacatgtacccgtgtaacagagg 391  Q
    |||||||||||||||||||||||||||| | ||||| ||| ||||||    
T  37123141 cacaaacaagagctagtgacgacgaacaaggacccgagtaccagagg 37123095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 31424304 - 31424247
Alignment:
Q  28 acttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||| ||||||  |||||||||||| |||||||||||| || ||||| ||||||||    
T  31424304 acttgaatcaaagcactgactcccgatctcgaatcaaaagcgaccggcctaccagact 31424247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 248; Significance: 1e-137; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 12 - 370
Target Start/End: Complemental strand, 3117577 - 3117219
Alignment:
Q  12 caaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 111  Q
    ||||| ||||||| |||||||||||||||| |||||||||||| | |||||||||||||||||||||||| |||||| || |||||||||||||||||||    
T  3117577 caaagcccaaaaaccaacttgagtcaaagaactgactcccgatcttgaatcaaaagtgatcggcccaccatactatatcaacaaattagcagggcacccc 3117478  T
Q  112 tcaccctcggtacaccagagaaaaaccaaatcaagtcaaa-caaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacgga 210  Q
    || ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||    
T  3117477 tcgcccccggaacaccagagaaaaaccaaatcaagtcaaaacaaagattgcaactagaccccgactcccaatctcgaagccaaatgaaccggcccactga 3117378  T
Q  211 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatct 310  Q
    |||||| |||||||||||||||| |||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||  ||    
T  3117377 aaaccaacacacaatatgtaagatgaaagacatggcatgcaaagattgaacaacaaacaaat-aaaaagaaaaagctcaacacaatgtgacacacaccct 3117279  T
Q  311 ccaaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaa 370  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3117278 ccaaactccataaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaa 3117219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 18 - 408
Target Start/End: Original strand, 16510304 - 16510686
Alignment:
Q  18 ccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccc 117  Q
    ||||||| |||||||||| ||||| ||||||| | || |||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||  |||    
T  16510304 ccaaaaaccaacttgagtaaaagaactgactctcaatctcgaatcaaaagtgatcggcccactagactttagaaccaaattagcagggcaccccttgccc 16510403  T
Q  118 tcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccag 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||| |||  ||||||||||  ||||||       
T  16510404 tcggtacaccagagaaaaaccatatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagcaaaagtaaccggcccaacgaaaac--- 16510500  T
Q  218 cacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctccaaact 317  Q
        || |||||||||| ||||||||||||||||||| |  ||||||||||||||||||| |||||||||||||||||||  |||| ||  |||||||||    
T  16510501 ----cattatgtaagacaaaagacatggcatgcgaag-taaaacaacaaacaaatcaaaaggaaaaggctcaacacaacggaacacgcaccctccaaact 16510595  T
Q  318 ccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    || ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||| ||||||| | || |||||||||    
T  16510596 ccataaacacctaaaccacccgaaaagcagaaacaagagctagtgacgacgaacatggacccgtgtaagagaggtttcctccaaaggaaat 16510686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 27 - 224
Target Start/End: Original strand, 20701815 - 20702011
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    ||||| || |||||| || ||||||||| |||||||||||||||||||| |||||| ||| |  ||||||| || |||||||||||||||| ||||||||    
T  20701815 aacttaagccaaagaactaactcccgatctcgaatcaaaagtgatcggcacaccagtctaaatgaccaaatcagaagggcacccctcacccccggtacac 20701914  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaa 224  Q
    |||||||||||||||||| | ||||||||  ||||| |||||| ||||||||||||||| |||| |||  ||||||||||  | |||||| |||||||    
T  20701915 cagagaaaaaccaaatcacgccaaacaaa-tttgcagctagacaccgaatcccgatctcaaagcaaaagtaaccggcccatcggaaaccatcacacaa 20702011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 3880624 - 3880791
Alignment:
Q  56 tcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaa 155  Q
    |||||||||||||||||||||||||| ||| ||| ||||||| || |||||||| ||||||||||||| |||||||||| ||||||||| | ||||| ||    
T  3880624 tcgaatcaaaagtgatcggcccaccaaactttaggaccaaatcagaagggcacctctcaccctcggtaaaccagagaaacaccaaatcatgccaaac-aa 3880722  T
Q  156 gattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaa 224  Q
    ||| ||| |||||| |||| |||||||||| |||| |||  ||| ||||||| | ||||||||| ||||    
T  3880723 gatagcagctagacaccgactcccgatctcaaagcaaaagtaactggcccaccggaaaccagcaaacaa 3880791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 27 - 233
Target Start/End: Original strand, 32935351 - 32935556
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||  || ||||||| || |||| ||||||||||| || | ||     
T  32935351 aacttgagtccaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcaggaccaaatcagaagggaacccctcacccccgatccat 32935450  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaata 226  Q
    || ||||| |||| | |||| ||||  ||||||||| |||||| || | | | |||||| |||| |||  ||||| ||||| | || |||||||||||||    
T  32935451 catagaaacaccataacaagccaaa-gaagattgcagctagacaccaacttctgatctcaaagcaaaagtaaccgacccaccggaatccagcacacaata 32935549  T
Q  227 tgtaaga 233  Q
    |||||||    
T  32935550 tgtaaga 32935556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 77 - 226
Target Start/End: Original strand, 15132585 - 15132732
Alignment:
Q  77 caccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaat 176  Q
    ||||||||| ||| || |||| | ||||||||||||| ||| | ||||| ||||||| | ||| |||||||||||||  ||||||| |||| | |||| |    
T  15132585 caccagactttagaacaaaatcaacagggcacccctcgcccccagtacatcagagaaca-ccatatcaagtcaaacag-gattgcagctagtcaccgact 15132682  T
Q  177 cccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaata 226  Q
    |||||||||||||| |||  ||||||||||| |||||||| |||||||||    
T  15132683 cccgatctcgaagcaaaagtaaccggcccaccgaaaaccatcacacaata 15132732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 36 - 207
Target Start/End: Complemental strand, 9224101 - 9223932
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaa 135  Q
    |||||| |||||||||||| |||||||||||| |||| |||||||||||| ||| ||||| |||  |||||| ||||||||| |||| ||||| || ||     
T  9224101 caaagaactgactcccgatctcgaatcaaaagcgatcagcccaccagactttaggaccaacttaaaagggca-ccctcacccccggtccaccaaaggaac 9224003  T
Q  136 accaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccac 207  Q
    ||||||    ||||||  |||||||||   |||| || | ||||||||||||||| |||| |||||||||||    
T  9224002 accaaagtcggtcaaaacaagattgcagaaagacaccaactcccgatctcgaagcaaaat-aaccggcccac 9223932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 26216042 - 26216089
Alignment:
Q  38 aagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||    
T  26216042 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 26216089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 140
Target Start/End: Original strand, 26534742 - 26534842
Alignment:
Q  38 aagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaac 137  Q
    |||| ||||||||| || ||||||||||||||||||||||||||||||  || ||||||| || ||| ||  |||||||| ||||  |||||||||| ||    
T  26534742 aagaactgactcccaatctcgaatcaaaagtgatcggcccaccagacttcaggaccaaatcagaaggcca--cctcacccgcggtctaccagagaaacac 26534839  T
Q  138 caa 140  Q
    |||    
T  26534840 caa 26534842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 33968625 - 33968732
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||  |||||| |||||||||||| |||||||||||| ||||  ||||| |||||| |  ||||||| || ||| ||||||  ||||||||| |||    
T  33968625 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatctacccactagactacataaccaaatcagaaggccaccccataccctcggttcac 33968724  T
Q  127 cagagaaa 134  Q
    ||||||||    
T  33968725 cagagaaa 33968732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 34105479 - 34105428
Alignment:
Q  30 ttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccacca 81  Q
    |||||||||  | |||||||||||| ||||||||||||||||||||||||||    
T  34105479 ttgagtcaagaaactgactcccgatctcgaatcaaaagtgatcggcccacca 34105428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 141
Target Start/End: Complemental strand, 21266163 - 21266070
Alignment:
Q  46 actcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaa 141  Q
    ||||||||| |||||||||||| |||||||||||||| || ||| ||||||| |  ||| ||  |||||||||| ||  |||||||||| ||||||    
T  21266163 actcccgatctcgaatcaaaagcgatcggcccaccagtctttaggaccaaatcataaggcca--cctcaccctccgtttaccagagaaacaccaaa 21266070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 12794173 - 12794071
Alignment:
Q  38 aagagctgactcccgatttcgaatcaaaagt-gatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaa 136  Q
    |||| |||||||| ||| ||||||||||||| ||||||||||| ||||| ||| ||||||  || ||| ||||||| ||||  ||| ||| ||||||| |    
T  12794173 aagaactgactcctgatctcgaatcaaaagttgatcggcccactagactttagaaccaaaacagaaggacaccccttacccctggttcactagagaaaca 12794074  T
Q  137 cca 139  Q
    |||    
T  12794073 cca 12794071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 34090416 - 34090374
Alignment:
Q  43 ctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||||||| ||||||||||| |||||| |||||||||||    
T  34090416 ctgactcccgatctcgaatcaaaattgatcgacccaccagact 34090374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 13423535 - 13423482
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccacc 80  Q
    |||||||| |||||| | ||||| |||| ||||||||||||||||||| |||||    
T  13423535 aacttgagccaaagaaccgactctcgatctcgaatcaaaagtgatcggtccacc 13423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 245; Significance: 1e-135; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 13 - 408
Target Start/End: Original strand, 35770 - 36165
Alignment:
Q  13 aaaggccaaaaatcaacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 112  Q
    |||| ||||||| |||||| |||||||||  ||||||||||| |||||||||||||||||||||||| ||||||||  |||||||||||  |||||||||    
T  35770 aaagcccaaaaaccaacttaagtcaaagaa-tgactcccgatctcgaatcaaaagtgatcggcccactagactatataaccaaattagctaggcacccct 35868  T
Q  113 caccctcggtacaccagagaaaaaccaaa-tcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaa 211  Q
    | ||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||    
T  35869 cgcccccggtacaccagagaaaaaccaaaattaagtcaaacaaagattgcaactagacctcgactcccgatctcgaagccaaatgaaccggcccaccgaa 35968  T
Q  212 aaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacacaatctc 311  Q
    | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||  ||     
T  35969 agccagcacacaatatgtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacactcaccctt 36068  T
Q  312 caaactccgtaaacacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaat 408  Q
    ||||||| ||||||||||||||||||| ||  ||| ||||||||||||| ||||||| ||||| |||| || |||| ||||||||||||||||||||    
T  36069 caaactctgtaaacacctaaaccacccaaaaggcataaacaagagctagagacgacggacatggacccttgaaacataggttgcttctaaaggaaat 36165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 30 - 224
Target Start/End: Complemental strand, 36773 - 36580
Alignment:
Q  30 ttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccag 129  Q
    ||||| |||||| |||||||||||| ||||||||||||||||| |||| ||||||| ||| ||||||| || |||||||||||||| |||||||||||||    
T  36773 ttgagacaaagaactgactcccgatctcgaatcaaaagtgatcagcccgccagactttaggaccaaatcagaagggcacccctcactctcggtacaccag 36674  T
Q  130 agaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaa 224  Q
    ||||| ||||||||| | |||||||| |||||| |||||| |||| ||| ||||||||| | |||| || |||||||| | |||||| |||||||    
T  36673 agaaacaccaaatcacgccaaacaaa-attgcagctagacaccgactcctgatctcgaatcaaaattaatcggcccaccggaaaccaacacacaa 36580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 27 - 206
Target Start/End: Complemental strand, 19452 - 19273
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| |||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||| | |||| ||    
T  19452 aacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctcacctttggtatac 19353  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggccca 206  Q
    |||||||| | ||||| ||| ||||  |||| |||| |||||| |||| ||||||||||||||| |||| ||||| ||||    
T  19352 cagagaaacatcaaattaagccaaaacaagaatgcagctagacaccgactcccgatctcgaagcaaaattaaccgaccca 19273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 27 - 206
Target Start/End: Original strand, 42150 - 42329
Alignment:
Q  27 aacttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacac 126  Q
    |||||||| |||||| |||||| ||||| |||||||||||||||||||||||||||||| ||| || |||| || ||||||||||||||| | |||| ||    
T  42150 aacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccctcacctttggtatac 42249  T
Q  127 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggccca 206  Q
    |||||||| | ||||| ||| ||||  |||| |||| ||||||  ||| ||||||||||||||| |||| ||||| ||||    
T  42250 cagagaaacatcaaattaagccaaaacaagaatgcagctagacatcgactcccgatctcgaagcaaaattaaccgaccca 42329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 44 - 204
Target Start/End: Complemental strand, 58179 - 58020
Alignment:
Q  44 tgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaaaccaaatc 143  Q
    ||||| ||||| | |||||||||||||||||||||||| ||| ||| |||||||  | ||||||||   |||||| ||||||||||||||| ||||||||    
T  58179 tgacttccgatcttgaatcaaaagtgatcggcccaccaaactttaggaccaaatctgaagggcaccatacaccctaggtacaccagagaaacaccaaatc 58080  T
Q  144 aagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcc 204  Q
    | | ||||| ||||||||| ||||||  ||| ||||||||||||||| |||  ||||||||    
T  58079 acgccaaac-aagattgcagctagacaacgactcccgatctcgaagcaaaagtaaccggcc 58020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 36 - 244
Target Start/End: Original strand, 1038 - 1244
Alignment:
Q  36 caaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcaccctcggtacaccagagaaaa 135  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||||||  |  ||||||| || |||| ||||||||  | | || |||||||||||     
T  1038 caaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg-acccctcattcccagtccaccagagaaac 1136  T
Q  136 acc-aaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcgaagccaaatgaaccggcccacggaaaaccagcacacaatatgtaagac 234  Q
    ||| ||||||| |||||| ||||||||| |||||| || | |||| |||||||||| |||  || ||||||||   || |||||||||||||||||||||    
T  1137 accaaaatcaa-tcaaac-aagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccactagaatccagcacacaatatgtaagac 1234  T
Q  235 gaaagacatg 244  Q
     || ||||||    
T  1235 aaacgacatg 1244  T

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Target: scaffold0620 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 3896 - 3841
Alignment:
Q  30 ttgagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 85  Q
    |||||||||  | |||||||||||| ||||||||||| ||||||||||||||||||    
T  3896 ttgagtcaagaaactgactcccgatctcgaatcaaaattgatcggcccaccagact 3841  T

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