View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10447_high_11 (Length: 268)
Name: NF10447_high_11
Description: NF10447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10447_high_11 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 54472095 - 54472329
Alignment:
| Q |
18 |
catcataaatcatcaccctcgaacaacggcaacaatacaaatgataacaatgggaatcaattgagcgtgggtggtataatagcagttgcaggtgcagctt |
117 |
Q |
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| T |
54472095 |
catcataaatcatcaccctcgaacaacggcaacaatacaaatgataacaatgggaatcaattgagcgtgggtggtataatagcagttgcaggtgcagctt |
54472194 |
T |
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| Q |
118 |
gtataatcctccttgtcattatcctactctgcgttatatgtacaagaaggaagaagagatcacaacctcatcacattcattactaccctactccagcaca |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54472195 |
gtataatcctccttgtcattatcctactctgcgttatatgtacaagaaggaagaagagatcacaacctcatcacattcattactaccctactccagcaca |
54472294 |
T |
|
| Q |
218 |
cggtatatatttttatatatctcctatttcttttt |
252 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
54472295 |
cggtatatatttttatatatctcctatttcttttt |
54472329 |
T |
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