View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10447_low_21 (Length: 261)

Name: NF10447_low_21
Description: NF10447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10447_low_21
NF10447_low_21
[»] chr8 (8 HSPs)
chr8 (1-257)||(44690081-44690337)
chr8 (10-144)||(37964398-37964532)
chr8 (10-144)||(27409938-27410073)
chr8 (26-144)||(27411005-27411124)
chr8 (10-145)||(37963448-37963584)
chr8 (15-98)||(7274437-7274521)
chr8 (13-57)||(35919237-35919281)
chr8 (182-257)||(45447067-45447142)
[»] chr2 (12 HSPs)
chr2 (1-239)||(31559298-31559537)
chr2 (43-257)||(9262677-9262891)
chr2 (73-245)||(31558022-31558195)
chr2 (14-91)||(43517851-43517929)
chr2 (75-229)||(7317479-7317634)
chr2 (15-85)||(30547821-30547892)
chr2 (14-91)||(40127442-40127520)
chr2 (15-97)||(5696155-5696238)
chr2 (72-135)||(22053308-22053371)
chr2 (72-139)||(22060291-22060358)
chr2 (206-257)||(28165719-28165771)
chr2 (15-89)||(44905952-44906028)
[»] chr1 (14 HSPs)
chr1 (1-245)||(9419561-9419807)
chr1 (10-121)||(27524466-27524578)
chr1 (14-257)||(28360830-28361078)
chr1 (10-144)||(28253383-28253519)
chr1 (10-113)||(37401206-37401311)
chr1 (15-98)||(43882243-43882327)
chr1 (10-84)||(37402399-37402474)
chr1 (182-257)||(46605845-46605920)
chr1 (10-91)||(12097709-12097791)
chr1 (15-91)||(13223115-13223193)
chr1 (11-87)||(35381586-35381663)
chr1 (9-87)||(12096080-12096159)
chr1 (11-91)||(32849698-32849780)
chr1 (204-261)||(13222970-13223027)
[»] chr7 (12 HSPs)
chr7 (1-257)||(20207738-20207990)
chr7 (182-261)||(20208387-20208467)
chr7 (15-91)||(19639753-19639830)
chr7 (14-91)||(41592977-41593055)
chr7 (15-91)||(38758100-38758178)
chr7 (182-238)||(5974245-5974301)
chr7 (134-257)||(38758191-38758315)
chr7 (1-91)||(38756862-38756956)
chr7 (11-91)||(37556301-37556383)
chr7 (14-91)||(41384356-41384434)
chr7 (15-87)||(5974354-5974427)
chr7 (15-91)||(5975440-5975517)
[»] chr3 (19 HSPs)
chr3 (11-257)||(33551644-33551893)
chr3 (2-226)||(34594321-34594544)
chr3 (73-257)||(34595590-34595775)
chr3 (13-256)||(32641140-32641386)
chr3 (1-157)||(27661259-27661417)
chr3 (141-257)||(26537475-26537592)
chr3 (16-122)||(27329020-27329127)
chr3 (9-113)||(26537590-26537695)
chr3 (10-144)||(27320445-27320580)
chr3 (11-91)||(39870651-39870732)
chr3 (15-98)||(1677172-1677256)
chr3 (1-91)||(27662380-27662471)
chr3 (4-86)||(26300752-26300841)
chr3 (14-91)||(31200720-31200798)
chr3 (14-84)||(27361399-27361470)
chr3 (43-91)||(3026684-3026733)
chr3 (15-91)||(13645049-13645126)
chr3 (43-91)||(39871948-39871997)
chr3 (15-91)||(3149460-3149539)
[»] chr4 (6 HSPs)
chr4 (13-241)||(4284143-4284372)
chr4 (100-241)||(4241507-4241647)
chr4 (16-91)||(11148548-11148625)
chr4 (15-96)||(2671733-2671815)
chr4 (15-98)||(20946050-20946134)
chr4 (1-91)||(34538328-34538422)
[»] scaffold0517 (2 HSPs)
scaffold0517 (10-113)||(6765-6870)
scaffold0517 (10-84)||(5602-5677)
[»] scaffold1176 (1 HSPs)
scaffold1176 (72-209)||(2160-2298)
[»] chr5 (3 HSPs)
chr5 (15-91)||(33489683-33489760)
chr5 (104-180)||(12890373-12890449)
chr5 (73-139)||(28592257-28592323)
[»] scaffold1118 (1 HSPs)
scaffold1118 (72-139)||(2592-2659)
[»] chr6 (1 HSPs)
chr6 (11-144)||(28050110-28050245)


Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-141; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 44690337 - 44690081
Alignment:
Q  1 gtggaaatattggtttttaaatttcaaaattcgatgattacgttttttaatttcatcctatgtaaatatttgtttttggttttagtccctcgaataacat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44690337 gtggaaatattggtttttaaatttcaaaattcgatgattacgttttttaatttcatcctatgtaaatatttgtttttggttttagtccctcgaataacat 44690238  T
Q  101 cacttatcatctctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagccagcacaacattttttaacggaagatgac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44690237 cacttatcatctctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagccagcacaacattttttaacggaagatgac 44690138  T
Q  201 gttagggaccaattccaaaaagttaacaagatacaagggctgttttgcaacaaaaaa 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44690137 gttagggaccaattccaaaaagttaacaagatacaagggctgttttacaacaaaaaa 44690081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 144
Target Start/End: Original strand, 37964398 - 37964532
Alignment:
Q  10 ttggtttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataacatcacttatc 108  Q
    |||||||||||| |||||||||  |||  ||||||||| | |||||||| ||||||||| || |||||||||||||||||||  | |||||  ||||||     
T  37964398 ttggtttttaaaattcaaaatttaatgtctacgttttt-attttcatccctatgtaaattttcgtttttggttttagtccctgtattaacactacttatg 37964496  T
Q  109 atctctcatgccacataagcatgttttgccaactca 144  Q
    |||||||||||||| | ||||  |||||||||||||    
T  37964497 atctctcatgccacctcagcaacttttgccaactca 37964532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 144
Target Start/End: Complemental strand, 27410073 - 27409938
Alignment:
Q  10 ttggtttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataacatcacttatc 108  Q
    |||||||||||| |||||||||  |||  || ||| |||| |||||||| ||||||||| || ||||||||||| |||||||  | |||||  ||||||     
T  27410073 ttggtttttaaaattcaaaatttaatgtctatgttatttattttcatccctatgtaaattttcgtttttggtttaagtccctgtattaacactacttatg 27409974  T
Q  109 atctctcatgccacataagcatgttttgccaactca 144  Q
    |||||||||||||| | ||||  |||||||||||||    
T  27409973 atctctcatgccacctcagcaacttttgccaactca 27409938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 27411005 - 27411124
Alignment:
Q  26 aaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataacatcacttatcatctctcatgccacat 124  Q
    |||||| |||| ||| ||||||||||||||||| ||||||||| | ||||||| |||||||||| |  | |||||  ||||||||||||||||||||| |    
T  27411005 aaaatttgatgtttaggttttttaatttcatccctatgtaaatttgtgtttttagttttagtccttgtattaacactacttatcatctctcatgccactt 27411104  T
Q  125 aagcatgttttgccaactca 144  Q
     | ||  |||||||||||||    
T  27411105 catcaacttttgccaactca 27411124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 145
Target Start/End: Complemental strand, 37963584 - 37963448
Alignment:
Q  10 ttggtttttaaatttcaaaattcgatgattacgttttttaatttcatc-ctatgtaaatatttgtttttggttttagtccctcgaataacatcacttatc 108  Q
    |||||||||||| ||||||||| | || ||| |||||||||||||||| || | ||||| | |||||||  ||||||||| |  | |||||  |||||||    
T  37963584 ttggtttttaaaattcaaaatttgctgtttaggttttttaatttcatctctctataaatttgtgttttttattttagtccttgtattaacactacttatc 37963485  T
Q  109 atctctcatgccacataagcatgttttgccaactcaa 145  Q
    || ||||||||||| | | ||  ||||||||||||||    
T  37963484 atttctcatgccacctcatcaacttttgccaactcaa 37963448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 7274437 - 7274521
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataac 98  Q
    ||||||| |||||| || |||||||| |||||||| |||||||| ||||||||| |   ||||||||||||||| ||| ||||||    
T  7274437 ttttaaaattcaaattttgatgattatgttttttattttcatccctatgtaaatttgcatttttggttttagtctctctaataac 7274521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 35919281 - 35919237
Alignment:
Q  13 gtttttaaatttcaaaattcgatgattacgttttttaatttcatc 57  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  35919281 gtttttaaattttaaaattcgatgattacgttgtttaattacatc 35919237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 45447142 - 45447067
Alignment:
Q  182 ttttttaacggaagatgacgttagggaccaattccaaaaagttaacaagatacaagggctgttttgcaacaaaaaa 257  Q
    |||||||||||| | |||||  |||||| |||| ||||||||||| || ||||||||| ||||| |||| ||||||    
T  45447142 ttttttaacggatggtgacggcagggacgaatttcaaaaagttaagaaaatacaagggttgtttcgcaataaaaaa 45447067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 164; Significance: 1e-87; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 31559298 - 31559537
Alignment:
Q  1 gtggaaatattggtttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataaca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||| |  ||| |||    
T  31559298 gtggaaatattgatttttaaatttcaaaattcgatgattacgtgttttaatttcatccctatgtaaatattcgtttttggttttagtccttgtaatcaca 31559397  T
Q  100 tcacttatcatctctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagccagcacaacattttttaacggaagatga 199  Q
     |||||||||||||||||||||||||| | ||||||||||||||| ||||||||| || |||||| ||||||||||||||| |||||||||||||| |||    
T  31559398 acacttatcatctctcatgccacataaacgtgttttgccaactcatcaagtgacatgtgtgcctccgttagccagcacaactttttttaacggaagttga 31559497  T
Q  200 cgttagggaccaattccaaaaagttaacaagatacaaggg 239  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  31559498 cgttagggaccaattccaaaaagttaagaagatacaaggg 31559537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 43 - 257
Target Start/End: Original strand, 9262677 - 9262891
Alignment:
Q  43 ttttttaatttcatcctatgtaaatatttgtttttggttttagtccctcgaataacatcacttatcatctctcatgccacataagcatgttttgccaact 142  Q
    ||||||||||||||||  || || | ||  ||||||||||||||||||| ||| | | |||||||||||||||| |||||||||   |||||||||||||    
T  9262677 ttttttaatttcatcccttgcaatttttcttttttggttttagtccctctaatcataacacttatcatctctcacgccacataactgtgttttgccaact 9262776  T
Q  143 caacaagtgacacgtatgcctctgttagccagcacaacattttttaacggaagatgacgttagggaccaattccaaaaagttaacaagatacaagggctg 242  Q
    ||  |||||||||||| | ||| ||||||||||||||| |||||||| ||||| ||||||||||||||||||||| |||| |||||||||||||||  ||    
T  9262777 cagtaagtgacacgtaagtctccgttagccagcacaactttttttaatggaagttgacgttagggaccaattccataaagataacaagatacaaggattg 9262876  T
Q  243 ttttgcaacaaaaaa 257  Q
    ||| |||||| ||||    
T  9262877 tttcgcaacagaaaa 9262891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 73 - 245
Target Start/End: Complemental strand, 31558195 - 31558022
Alignment:
Q  73 tttttggttttagtccctcgaataacatcacttatcatctctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagcc 172  Q
    ||||||||||| ||||||| |||    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||| ||||||    
T  31558195 tttttggttttggtccctcaaatctagtcacttattatctctcatgccacataagcatgttttgccaactcaacaagtgacacatgcgcctctattagcc 31558096  T
Q  173 agcacaac-attttttaacggaagatgacgttagggaccaattccaaaaagttaacaagatacaagggctgttt 245  Q
    | || |||  ||||||||| |||| ||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  31558095 aacaaaacttttttttaacagaagttgacgttaggggccaatttcaaaaagttaacaagatacaagggttgttt 31558022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 43517851 - 43517929
Alignment:
Q  14 tttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctc 91  Q
    |||||||| ||||||||| |||| |||| |||||||| ||||||| ||||| ||| || ||||||||||||||||||||    
T  43517851 tttttaaaattcaaaatttgatgtttactttttttaaattcatccctatgtcaattttcgtttttggttttagtccctc 43517929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 229
Target Start/End: Complemental strand, 7317634 - 7317479
Alignment:
Q  75 tttggttttagtccctcgaataacatcacttatcatctctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagccag 174  Q
    ||||||||||||| ||| ||| | |||| ||||||||| ||| |||||||||||||||||||  |  |||   |||||||||| |||||| ||| ||||     
T  7317634 tttggttttagtctctcaaatcatatcagttatcatctgtcaggccacataagcatgttttgttatgtcagtgagtgacacgtgtgcctccgtttgccaa 7317535  T
Q  175 cacaacattt-tttaacggaagatgacgttagggaccaattccaaaaagttaacaa 229  Q
    || | | ||| | |||| |||| | || |||||||||||  |||||||||||||||    
T  7317534 caaagcgtttatgtaacagaagttaacattagggaccaaaaccaaaaagttaacaa 7317479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 30547821 - 30547892
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttag 85  Q
    |||||||||| |||||| |||||||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  30547821 ttttaaattttaaaatttgatgattatgttttttaatttcgtccttatgtaaatatacatttttggttttag 30547892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 40127520 - 40127442
Alignment:
Q  14 tttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctc 91  Q
    |||||||| || |||||| |||| |||| |||||||| ||||||| ||||| ||| || ||||||||||||||||||||    
T  40127520 tttttaaaatttaaaatttgatgtttactttttttaaattcatccctatgtcaattttcgtttttggttttagtccctc 40127442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 5696155 - 5696238
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataa 97  Q
    ||||||| |||||| || |||||||| |||||||| |||| ||| | ||||||| |  |||||||||||||||||||| |||||    
T  5696155 ttttaaaattcaaattttgatgattatgttttttattttcgtccctgtgtaaatttacgtttttggttttagtccctctaataa 5696238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 22053371 - 22053308
Alignment:
Q  72 gtttttggttttagtccctcgaataacatcacttatcatctctcatgccacataagcatgtttt 135  Q
    |||||||||||| ||||||| ||| | |||||||||||| | ||| ||||||||||| ||||||    
T  22053371 gtttttggttttggtccctcaaatcatatcacttatcatttgtcaggccacataagcgtgtttt 22053308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 22060291 - 22060358
Alignment:
Q  72 gtttttggttttagtccctcgaataacatcacttatcatctctcatgccacataagcatgttttgcca 139  Q
    ||||||| |||| ||||||| ||| | |||||||||||| | ||| ||| ||||||||||||||||||    
T  22060291 gtttttgattttcgtccctcaaatcatatcacttatcatatgtcaggccccataagcatgttttgcca 22060358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 28165771 - 28165719
Alignment:
Q  206 ggaccaattccaaaaagttaacaagatacaagggctgtttt-gcaacaaaaaa 257  Q
    ||||||||| ||||||||||| || ||||||||| |||||| |||||||||||    
T  28165771 ggaccaatttcaaaaagttaagaaaatacaagggttgttttcgcaacaaaaaa 28165719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 44905952 - 44906028
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgtttttt-aatttcatcc-tatgtaaatatttgtttttggttttagtccc 89  Q
    ||||||||| ||||||| |||||||| ||||||| |||||| ||| |||||||| ||   |||||||||||||||||    
T  44905952 ttttaaattccaaaatttgatgattatgtttttttaatttcgtccctatgtaaaaatgcatttttggttttagtccc 44906028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 9419561 - 9419807
Alignment:
Q  1 gtggaaatattggtttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataaca 99  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||| ||| |||    
T  9419561 gtggaaagattggtttttaaatttcaaaatttgatgattacgttttttaatttcatccctatgtaaatattcgtttttggttttattccctctaatcaca 9419660  T
Q  100 tcacttatcatctctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagccagcacaacat-tttttaacggaagatg 198  Q
     |||||||||| | ||||||||||||||| |||||||||||||||  |||||||| || |||||  ||||||| ||||||| | ||||||||||||| |     
T  9419661 acacttatcatatttcatgccacataagcgtgttttgccaactcagaaagtgacatgtgtgccttcgttagccggcacaacttatttttaacggaagtta 9419760  T
Q  199 acgttagggaccaattccaaaaagttaacaagatacaagggctgttt 245  Q
    | ||| |||||||||| | ||||||||||||||| |||||| |||||    
T  9419761 atgtttgggaccaatttctaaaagttaacaagatccaagggttgttt 9419807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 27524578 - 27524466
Alignment:
Q  10 ttggtttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataacatcacttatc 108  Q
    |||||||||||| ||||||||| |||| |||||||||| |||||||||| ||||||||| | ||||||||||||||||||||  | |||||  |||||||    
T  27524578 ttggtttttaaaattcaaaatttgatgtttacgtttttaaatttcatccctatgtaaatttgtgtttttggttttagtccctgtactaacactacttatc 27524479  T
Q  109 atctctcatgcca 121  Q
    |||||||||||||    
T  27524478 atctctcatgcca 27524466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 28361078 - 28360830
Alignment:
Q  14 tttttaaatttcaaaattcgatgattacgtttttt-aatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataacatcacttatcatc 111  Q
    ||||||| ||| ||| || |||| ||||||||||| |||||||||| ||||||| | | |||||||| |||| || |||| |||    ||||||||||||    
T  28361078 tttttaatttttaaattttgatgtttacgttttttcaatttcatccctatgtaattttgtgtttttgattttggttcctcaaatctagtcacttatcatc 28360979  T
Q  112 tctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagccagcacaacatttttt----aacggaagatgacgttaggg 207  Q
    || |||||||||||||  ||||| ||| ||| | |||||||||||  |||||| ||| | ||||||| | ||||||    ||| |||  |||||||||||    
T  28360978 tcgcatgccacataagtgtgttt-gcctacttagcaagtgacacgggtgcctccgtttgtcagcacatctttttttttttaactgaacctgacgttaggg 28360880  T
Q  208 accaattccaaaaagttaacaagatacaagggctgttttgcaacaaaaaa 257  Q
    | ||||||||||||||||| |||||||||| | ||||| |||||||||||    
T  28360879 aacaattccaaaaagttaagaagatacaagagttgtttcgcaacaaaaaa 28360830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 144
Target Start/End: Original strand, 28253383 - 28253519
Alignment:
Q  10 ttggtttttaaatttcaaaattcgatgattacgtttttt-aatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataacatcacttat 107  Q
    |||||||||||| ||||||||| |||| |||| |||||| |||||||||| ||||||||| |  ||||||| |||||||||||| | |||||  ||||||    
T  28253383 ttggtttttaaaattcaaaatttgatgtttacctttttttaatttcatccctatgtaaatttacgtttttgattttagtccctctactaacactacttat 28253482  T
Q  108 catctctcatgccacataagcatgttttgccaactca 144  Q
    ||||||||||||||  | ||||  |||||||||||||    
T  28253483 catctctcatgccatctcagcaaattttgccaactca 28253519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 37401311 - 37401206
Alignment:
Q  10 ttggtttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgttttt-ggttttagtccctcgaataacatcacttat 107  Q
    ||||||||||||  |||||||| |||| |||| |||||||| ||||||| ||||||||| | ||||||| |||||||||||||  | |||||| ||||||    
T  37401311 ttggtttttaaaaatcaaaatttgatgtttaccttttttaacttcatccctatgtaaatttgtgttttttggttttagtccctgtactaacattacttat 37401212  T
Q  108 catctc 113  Q
    ||||||    
T  37401211 catctc 37401206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 43882327 - 43882243
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgttttttaatttcatc-ctatgtaaatatttgtttttggttttagtccctcgaataac 98  Q
    ||||||| |||||| || |||||||| |||||||| || | || |||||||||| || |||||||||||||||||||| ||||||    
T  43882327 ttttaaaattcaaattttgatgattatgttttttatttccgtctctatgtaaattttcgtttttggttttagtccctctaataac 43882243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 37402399 - 37402474
Alignment:
Q  10 ttggtttttaaatttcaaaattcgatgattacgttttttaatttcat-cctatgtaaatatttgtttttggtttta 84  Q
    |||||||||||| ||||||||| |||  ||||||||||||||||||| ||||||||||| |   ||||||||||||    
T  37402399 ttggtttttaaaattcaaaatttgatttttacgttttttaatttcatccctatgtaaatttgcatttttggtttta 37402474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 257
Target Start/End: Original strand, 46605845 - 46605920
Alignment:
Q  182 ttttttaacggaagatgacgttagggaccaattccaaaaagttaacaagatacaagggctgttttgcaacaaaaaa 257  Q
    |||||||||||| | |||||  |||||| |||| ||||||||||| || ||||||||| ||||| |||||||||||    
T  46605845 ttttttaacggatggtgacggcagggacgaatttcaaaaagttaagaaaatacaagggttgtttcgcaacaaaaaa 46605920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 12097709 - 12097791
Alignment:
Q  10 ttggtttttaaatttcaaaattcgatgattacgttttttaatttcat-cctatgtaaatatttgtttttggttttagtccctc 91  Q
    |||||||||||| ||||||| | ||| |||| ||||||||||||||| ||||  |||| ||  ||||||||||||||||||||    
T  12097709 ttggtttttaaaattcaaaaattgataattaagttttttaatttcatccctacctaaaaatgcgtttttggttttagtccctc 12097791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 13223193 - 13223115
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgtttttt-aatttcatcc-tatgtaaatatttgtttttggttttagtccctc 91  Q
    ||||||||| ||||||| |||||||| ||||||| |||||| ||| |||||||| ||  ||||||||||||||||||||    
T  13223193 ttttaaattccaaaatttgatgattatgtttttttaatttcgtccctatgtaaaaatgcgtttttggttttagtccctc 13223115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 35381663 - 35381586
Alignment:
Q  11 tggtttttaaatttcaaaattcgatgattacgttttttaatttcat-cctatgtaaatatttgtttttggttttagtc 87  Q
    ||||||||||| ||||||| | ||||||||| |||||||||| ||| |||||||||| ||  ||||||| ||||||||    
T  35381663 tggtttttaaaattcaaaaattgatgattacattttttaattacatccctatgtaaaaatacgtttttgcttttagtc 35381586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 12096159 - 12096080
Alignment:
Q  9 attggtttttaaatttcaaaattcgatgattacgttttttaatttcat-cctatgtaaatatttgtttttggttttagtc 87  Q
    ||||||||||||| ||||||| | ||| |||| ||||||||||||||| ||  |||||| ||  ||||||||||||||||    
T  12096159 attggtttttaaaattcaaaaattgataattaagttttttaatttcatccccgtgtaaaaatgcgtttttggttttagtc 12096080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 32849698 - 32849780
Alignment:
Q  11 tggtttttaaatttcaaaattcgatgattacg-ttttttaatttcat-cctatgtaaatatttgtttttggttttagtccctc 91  Q
    ||||||||||| ||||||| | |||| ||||| |||||||||| ||| ||| |||||| ||  ||||||||||||||||||||    
T  32849698 tggtttttaaaattcaaaaattgatgtttacgtttttttaattacatccctgtgtaaaaatacgtttttggttttagtccctc 32849780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 13223027 - 13222970
Alignment:
Q  204 agggaccaattccaaaaagttaacaagatacaagggctgttttgcaacaaaaaagata 261  Q
    ||||||||||| ||||| |||||  | ||||||||| ||||| |||||||||||||||    
T  13223027 agggaccaatttcaaaaggttaaataaatacaagggttgtttcgcaacaaaaaagata 13222970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 4e-59; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 20207990 - 20207738
Alignment:
Q  1 gtggaaatattggtttttaaatttcaaaattcgatgattacgttttttaatttcatccta-tgtaaatatttgtttttggttttagtccctcgaataaca 99  Q
    |||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||| | ||||||       | |||||||||||||||| ||| |||    
T  20207990 gtggaaatattgatttttaaatttcaaaattagatgattacattttttaatttcatcccactgtaaaa------tgttggttttagtccctctaatcaca 20207897  T
Q  100 tcacttatcatctctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagccagcacaacat-tttttaacggaagatg 198  Q
      |||||||||| ||||||| |||||||| ||||||||||||||| |||||||||||| ||  || ||||||||||||||| | ||||||||||||| ||    
T  20207896 atacttatcatcgctcatgcgacataagcgtgttttgccaactcagcaagtgacacgtttgtttccgttagccagcacaacttatttttaacggaagttg 20207797  T
Q  199 acgttagggaccaattccaaaaagttaacaagatacaagggctgttttgcaacaaaaaa 257  Q
    ||||||||||||||||  ||||||||||||||||| |||||  |||||||| |||||||    
T  20207796 acgttagggaccaattttaaaaagttaacaagatataagggtcgttttgcagcaaaaaa 20207738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 20208387 - 20208467
Alignment:
Q  182 ttttttaacggaagatgacgttagggaccaattccaaaaagttaacaagatacaagggctgttttgcaac-aaaaaagata 261  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||    
T  20208387 ttttttaacggaagttgacgttagggaccaattccaaaaatttaacatgatacaagggttgtttcgcaactaaaaaagata 20208467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 19639753 - 19639830
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgttttttaatttcat-cctatgtaaatatttgtttttggttttagtccctc 91  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||  |||||| |||||| ||||||    
T  19639753 ttttaaatttcaaaatttgatgattacgttttttaatttcatccctatgtaaacatgcgttttttgttttaatccctc 19639830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 41592977 - 41593055
Alignment:
Q  14 tttttaaatttcaaaattcgatgattacgttttttaatttcat-cctatgtaaatatttgtttttggttttagtccctc 91  Q
    |||||||| ||||||||| |||| |||| |||||||||||||| ||||||| ||| || ||||||||||||||||||||    
T  41592977 tttttaaaattcaaaatttgatgtttactttttttaatttcatccctatgtcaattttcgtttttggttttagtccctc 41593055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 38758100 - 38758178
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgtttttt-aatttcatcc-tatgtaaatatttgtttttggttttagtccctc 91  Q
    ||||||||| ||||||| |||||||| ||||||| |||||| ||| |||||||| || |||||||||||||||||||||    
T  38758100 ttttaaattccaaaatttgatgattatgtttttttaatttcgtccctatgtaaaaatgtgtttttggttttagtccctc 38758178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 5974301 - 5974245
Alignment:
Q  182 ttttttaacggaagatgacgttagggaccaattccaaaaagttaacaagatacaagg 238  Q
    |||| ||||||||| ||| |||| ||||||||| ||||||||||| |||||||||||    
T  5974301 ttttgtaacggaagttgatgttatggaccaatttcaaaaagttaagaagatacaagg 5974245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 257
Target Start/End: Original strand, 38758191 - 38758315
Alignment:
Q  134 ttgccaactcaacaagtgacacgtatgcctctgttagccagcacaacatttttta-acggaagatgacgttagggaccaattccaaaaagttaacaagat 232  Q
    ||||||| ||| || ||| ||||||||| ||||||||||| ||   ||||||||  ||||||   |||| |||||||||||| ||||| |||||  | ||    
T  38758191 ttgccaattcatcatgtgccacgtatgcgtctgttagccaacaatgcatttttttgacggaaatagacggtagggaccaatttcaaaaggttaagtaaat 38758290  T
Q  233 acaagggctgttttgcaacaaaaaa 257  Q
    ||||||| ||||| |||||||||||    
T  38758291 acaagggttgtttcgcaacaaaaaa 38758315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 38756956 - 38756862
Alignment:
Q  1 gtggaaatattggtttttaaatttcaaaa-ttcgatgattacgtttttt-aatttcat--cctatgtaaatatttgtttttggttttagtccctc 91  Q
    ||||||| ||||| ||| ||||||||||| || |||||||||||||||| ||||| |   |||||||||| || ||||||| |||||||||||||    
T  38756956 gtggaaagattggatttaaaatttcaaaaatttgatgattacgtttttttaattttagtccctatgtaaaaatgtgtttttcgttttagtccctc 38756862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 37556301 - 37556383
Alignment:
Q  11 tggtttttaaatttcaaaattcgatgattacg-ttttttaatttcat-cctatgtaaatatttgtttttggttttagtccctc 91  Q
    ||||||||||| ||||||| | |||| ||||| |||||||||| ||| ||| |||||| ||  ||||||||||||||||||||    
T  37556301 tggtttttaaaattcaaaaattgatgtttacgtttttttaattacatccctgtgtaaaaatacgtttttggttttagtccctc 37556383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 41384434 - 41384356
Alignment:
Q  14 tttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctc 91  Q
    |||||||| |||| |||| |||| |||  |||||||| ||||||| ||||| ||| || ||||||||||||||||||||    
T  41384434 tttttaaaattcagaatttgatgtttattttttttaaattcatccctatgtcaattttcgtttttggttttagtccctc 41384356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 5974427 - 5974354
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgttttttaatttcat-cctatgtaaatatttgtttttggttttagtc 87  Q
    |||||||||||||| || |||||||| |||||||||||| || ||| ||||||| | |||||||  ||||||||    
T  5974427 ttttaaatttcaaactttgatgattatgttttttaattttatccctgtgtaaatttgtgttttttattttagtc 5974354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 5975440 - 5975517
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgttttttaatttcat-cctatgtaaatatttgtttttggttttagtccctc 91  Q
    |||||||||| ||| || |||||||| ||||||||||||| | ||||||||||| |   ||||| |||||||||||||    
T  5975440 ttttaaattttaaattttgatgattatgttttttaatttcgtccctatgtaaatttgcattttttgttttagtccctc 5975517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 1e-50; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 11 - 257
Target Start/End: Complemental strand, 33551893 - 33551644
Alignment:
Q  11 tggtttttaaatttcaaaattcgatgattacgttttt-taatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataacatcacttatc 108  Q
    |||||||| ||||||||| || |||| |||||||||| || |||||||| | || || | | |||||||||||||  ||| || |||    |||||||||    
T  33551893 tggttttttaatttcaaattttgatgtttacgtttttctagtttcatccctgtgcaattttgtgtttttggttttgatccttcaaatctagtcacttatc 33551794  T
Q  109 atctctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagccagcacaacattttttaa-cggaagatgacgttaggg 207  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||| || |||||| |||| |||||||||| |||||||| |||||  |||||||||||    
T  33551793 atctctcatgccacataagcgtgttttgccgactcagcaagtgacatgtgtgcctccgttaaccagcacaactttttttaagcggaacctgacgttaggg 33551694  T
Q  208 accaattccaaaaagttaacaagatacaagggctgttttgcaacaaaaaa 257  Q
    | ||||||||||||||||| |||||||||||||||||| |||||||||||    
T  33551693 atcaattccaaaaagttaagaagatacaagggctgtttcgcaacaaaaaa 33551644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 226
Target Start/End: Complemental strand, 34594544 - 34594321
Alignment:
Q  2 tggaaatattggtttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataacat 100  Q
    |||||| ||||||||||||   ||||||||| ||||||| ||||||||||||||||| ||||||||| |  |||||||||||||||||||| ||| |||     
T  34594544 tggaaagattggtttttaa---tcaaaattcaatgattatgttttttaatttcatccctatgtaaatttccgtttttggttttagtccctctaatcacaa 34594448  T
Q  101 cacttatcatctctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagccagcacaac-attttttaacggaagatga 199  Q
    || ||||| ||||||||| ||| ||||| | | ||| ||||| ||||||||||| || |||||||||||| || ||||||  |||||||||||||||| |    
T  34594447 caattatcgtctctcatgtcacgtaagcgtatcttgacaacttaacaagtgacatgtgtgcctctgttagacaacacaacttttttttaacggaagatta 34594348  T
Q  200 cgttagggaccaattccaaaaagttaa 226  Q
    |||||||||||||||||||||||||||    
T  34594347 cgttagggaccaattccaaaaagttaa 34594321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 73 - 257
Target Start/End: Original strand, 34595590 - 34595775
Alignment:
Q  73 tttttggttttagtccctcgaataacatcacttatcatctctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagcc 172  Q
    ||||||||||||||||||| ||| ||| |||||| ||||| ||||||||||||||| ||||||||||||||| ||||||| | |  ||||||||||||||    
T  34595590 tttttggttttagtccctctaatcacaacacttaccatctttcatgccacataagcgtgttttgccaactcagcaagtgatatgcgtgcctctgttagcc 34595689  T
Q  173 agcacaacat-tttttaacggaagatgacgttagggaccaattccaaaaagttaacaagatacaagggctgttttgcaacaaaaaa 257  Q
    | |||| ||| ||||||||| ||| ||| |||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||    
T  34595690 atcacaccatctttttaacgaaagttgatgttagggaccaatttcaaaaggttaacaagatacaagggttgtttcgcaacaaaaaa 34595775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 256
Target Start/End: Complemental strand, 32641386 - 32641140
Alignment:
Q  13 gtttttaaatttcaaaattcgatgattacgtttttt-aatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataacatcacttatcat 110  Q
    |||||||||||| ||| || |||| ||||||||||| |||||||||| | || || | |  ||||||| |||| ||||||| |||   ||||||||| ||    
T  32641386 gtttttaaattttaaattttgatgtttacgttttttcaatttcatccctctgcaattttgcgtttttgattttggtccctcaaatctaatcacttattat 32641287  T
Q  111 ctctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagccagcacaac-attttttaacggaagatgacgttagggac 209  Q
    || ||||||||||||| | ||||||| || ||||||||||| || || ||||||||||||| ||||||||  |||||||||| ||  | || ||| ||||    
T  32641286 ctttcatgccacataaacgtgttttgtcagctcaacaagtggcatgtgtgcctctgttagctagcacaacttttttttaacgaaacctaacattaaggac 32641187  T
Q  210 caattccaaaaagttaacaagatacaagggctgttttgcaacaaaaa 256  Q
    ||||||||||| ||||| |||||| | ||| ||||| |||| |||||    
T  32641186 caattccaaaatgttaagaagatataggggttgtttcgcaaaaaaaa 32641140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 27661417 - 27661259
Alignment:
Q  1 gtggaaatattggtttttaaatttcaaaattcgatgattacgttt-tttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataac 98  Q
    |||||||| |||  |||||||||||||||||  |||||||| ||| |||||||||| || ||||||||||| |||| || ||||||||||||| | ||||    
T  27661417 gtggaaattttgagttttaaatttcaaaattttatgattacatttctttaatttcacccctatgtaaatatgtgttatttgttttagtccctctactaac 27661318  T
Q  99 atcacttatcatctctcatgccacataagcatgttttgccaactcaacaagtgacacgt 157  Q
    | || || |||||||||||||||||||||| |||||| ||| |||| ||| || |||||    
T  27661317 accagttgtcatctctcatgccacataagcgtgtttttccatctcatcaattgtcacgt 27661259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 26537592 - 26537475
Alignment:
Q  141 ctcaacaagtgacacgtatgcctctgttagccagcacaacatttttt-aacggaagatgacgttagggaccaattccaaaaagttaacaagatacaaggg 239  Q
    |||| ||||||||| || |||||| ||| |||| || ||| |||||| || ||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  26537592 ctcatcaagtgacatgtgtgcctccgttggccatcaaaacttttttttaatggaagttgacgttagggaccaattccaaaaagttaagaagatacaaggg 26537493  T
Q  240 ctgttttgcaacaaaaaa 257  Q
     ||||| |||| ||||||    
T  26537492 ttgtttcgcaataaaaaa 26537475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 27329127 - 27329020
Alignment:
Q  16 tttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataacatcacttatcatctct 114  Q
    |||||| ||||||||| |||| ||| ||||||||||||||||| ||||||||| | |||||||||||||||||| |  | |||||  |||||||||||||    
T  27329127 tttaaaattcaaaatttgatgtttaggttttttaatttcatccctatgtaaatttgtgtttttggttttagtccttgtattaacactacttatcatctct 27329028  T
Q  115 catgccac 122  Q
    ||||||||    
T  27329027 catgccac 27329020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 26537695 - 26537590
Alignment:
Q  9 attggtttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataacatcacttat 107  Q
    ||||| |||||||||  |||||| |||||||||||||||||||||||||| ||| ||||||| |||||||| |||||||||||| | ||||| || || |    
T  26537695 attgggttttaaattgtaaaatttgatgattacgttttttaatttcatccttatttaaatatgtgtttttgattttagtccctctactaacaccaattgt 26537596  T
Q  108 catctc 113  Q
    ||||||    
T  26537595 catctc 26537590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 144
Target Start/End: Original strand, 27320445 - 27320580
Alignment:
Q  10 ttggtttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataacatcacttatc 108  Q
    |||||||||||| |||||||||  |||  ||||||||||| |||||||| ||||||||| || ||||||| |||||||||||  | |||||  ||||||     
T  27320445 ttggtttttaaaattcaaaatttaatgtctacgttttttattttcatccctatgtaaattttcgtttttgattttagtccctgtattaacactacttatg 27320544  T
Q  109 atctctcatgccacataagcatgttttgccaactca 144  Q
    |||||||||||||| | | ||  |||||||||||||    
T  27320545 atctctcatgccacctcaacaacttttgccaactca 27320580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 39870732 - 39870651
Alignment:
Q  11 tggtttttaaatttcaaaattcgatgattacgttttttaatttcat-cctatgtaaatatttgtttttggttttagtccctc 91  Q
    ||||||||||| ||||||| | |||||||||||||||||||| ||| |||||||||| ||  ||||||| ||||||||||||    
T  39870732 tggtttttaaaattcaaaaattgatgattacgttttttaattacatccctatgtaaaaatacgtttttgattttagtccctc 39870651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 1677256 - 1677172
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataac 98  Q
    ||||||| |||||| || ||||||||||||||||| |||| ||| ||||||||| |  |||||||||||||||||||| ||||||    
T  1677256 ttttaaaattcaaattttgatgattacgttttttattttcgtccctatgtaaatttgcgtttttggttttagtccctctaataac 1677172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 27662380 - 27662471
Alignment:
Q  1 gtggaaatattggtttttaaatttcaaaattcgatgattacgtttt-ttaatttcatcctatgtaaatatttgtttttggttttagtccctc 91  Q
    |||||||||  || ||||||||||||||||| ||| |||| ||||| |||||||| |||| |||||||||  |||||| |||||||||||||    
T  27662380 gtggaaataaaggattttaaatttcaaaatttgataattatgtttttttaatttcgtcctctgtaaatatgcgtttttagttttagtccctc 27662471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 26300841 - 26300752
Alignment:
Q  4 gaaatattggtttttaaatttcaaaattcgatgattacgtttttt------aatttcatcc-tatgtaaatatttgtttttggttttagt 86  Q
    |||| ||||||||| |||||||||||||| ||| |||||||||||      |||||||||| |||| |||||||||||||||||||||||    
T  26300841 gaaagattggttttaaaatttcaaaattcaatgtttacgtttttttttttcaatttcatccctatgcaaatatttgtttttggttttagt 26300752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 31200720 - 31200798
Alignment:
Q  14 tttttaaatttcaaaattcgatgattacgttttttaatttcat-cctatgtaaatatttgtttttggttttagtccctc 91  Q
    |||||||| ||||||||| |||| |||| ||||| || ||||| ||||||| ||| |||||||||||||||||||||||    
T  31200720 tttttaaaattcaaaatttgatgtttacttttttaaaattcatgcctatgtcaatttttgtttttggttttagtccctc 31200798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 27361470 - 27361399
Alignment:
Q  14 tttttaaatttcaaaattcgatgattacgttttttaatttcat-cctatgtaaatatttgtttttggtttta 84  Q
    |||||||| ||||||||| |||  ||| ||||||||||||||| ||||||||||| | ||||||||||||||    
T  27361470 tttttaaaattcaaaatttgatatttaggttttttaatttcatccctatgtaaatttgtgtttttggtttta 27361399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 3026684 - 3026733
Alignment:
Q  43 ttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctc 91  Q
    |||||||||| ||||| |||||||| || |||||||||||||||||||||    
T  3026684 ttttttaattacatccctatgtaaaaatatgtttttggttttagtccctc 3026733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 13645126 - 13645049
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctc 91  Q
    ||||| |||||||| || ||| |||| |||||||| |||| ||| ||||||||| |  ||||||||||||||||||||    
T  13645126 ttttacatttcaaattttgattattatgttttttattttcgtccctatgtaaatttgcgtttttggttttagtccctc 13645049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 39871948 - 39871997
Alignment:
Q  43 ttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctc 91  Q
    |||||||||| ||||| |||||||| || |||||||||||||||||||||    
T  39871948 ttttttaattacatccctatgtaaaaatatgtttttggttttagtccctc 39871997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 3149539 - 3149460
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgtttttt--aatttcatcc-tatgtaaatatttgtttttggttttagtccctc 91  Q
    ||||||||| ||||||| |||||||| |||||||  |||||| ||| |||||||| ||  || |||||||||||||||||    
T  3149539 ttttaaattccaaaatttgatgattatgttttttttaatttcgtccctatgtaaaaatgcgtctttggttttagtccctc 3149460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 5e-37; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 4284143 - 4284372
Alignment:
Q  13 gtttttaaatttcaaaattcgatgattacgtttttt-aatttca-tcctatgtaaatatttgtttttggttttagtccctcgaataacatcacttatcat 110  Q
    |||||||||||||||| |  |||| ||||||||||| ||||||| |||| || || | |  |||||||||||| ||||||| |||    |||||||||||    
T  4284143 gtttttaaatttcaaattatgatgtttacgttttttcaatttcactcctctgcaattttgcgtttttggttttggtccctcaaatctagtcacttatcat 4284242  T
Q  111 ctctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagccagcacaacattttttaacggaagatgacgttagggacc 210  Q
    || |||||| |||||||  |  |||||||||||| |||||||||| | ||||||||||||||| |||||  |||||||||||||  ||| ||||||||||    
T  4284243 ctttcatgc-acataagtgtactttgccaactcagcaagtgacacatgtgcctctgttagccaacacaattttttttaacggaacctgatgttagggacc 4284341  T
Q  211 aattccaaaaagttaacaagatacaagggct 241  Q
    |||||||||||||||| |||||| |||||||    
T  4284342 aattccaaaaagttaagaagatataagggct 4284372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 100 - 241
Target Start/End: Original strand, 4241507 - 4241647
Alignment:
Q  100 tcacttatcatctctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagccagcacaacattttttaacggaagatga 199  Q
    ||||||||||||| |||||| ||||| |  || |||||||||||| |||||||||| | ||||||||||||||| |||||  ||||||||| |||  |||    
T  4241507 tcacttatcatctttcatgc-acataggtgtgctttgccaactcagcaagtgacacatgtgcctctgttagccaacacaattttttttaacagaacctga 4241605  T
Q  200 cgttagggaccaattccaaaaagttaacaagatacaagggct 241  Q
    | |||||||||||||||||||| |||| |||||| |||||||    
T  4241606 cattagggaccaattccaaaaatttaagaagatataagggct 4241647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 11148625 - 11148548
Alignment:
Q  16 tttaaatttcaaaattcgatgattacgtttttt-aatttcatcc-tatgtaaatatttgtttttggttttagtccctc 91  Q
    |||||||| ||||||| |||||||| ||||||| |||||| ||| |||||||| || |||||||||||||||||||||    
T  11148625 tttaaattccaaaatttgatgattatgtttttttaatttcgtccctatgtaaaaatgtgtttttggttttagtccctc 11148548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 2671815 - 2671733
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaata 96  Q
    ||||||| |||||| || |||||||| |||||||| |||| ||| ||||||||| |  |||||||||||||||||||| ||||    
T  2671815 ttttaaaattcaaattttgatgattatgttttttattttcgtccctatgtaaatttgcgtttttggttttagtccctctaata 2671733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 20946134 - 20946050
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgttttttaatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataac 98  Q
    ||||||| |||||| || ||||||||  ||||||| |||| ||| | ||||||| | ||||||||||||||||||||| ||||||    
T  20946134 ttttaaaattcaaattttgatgattatattttttattttcgtccctgtgtaaatttgtgtttttggttttagtccctctaataac 20946050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 34538422 - 34538328
Alignment:
Q  1 gtggaaatattggtttttaaatttcaaaa-ttcgatgattacgtttttt-aatttcat--cctatgtaaatatttgtttttggttttagtccctc 91  Q
    ||||||| ||||| ||| ||||||||||| || |||||||||||||||| |||||||   |||||||||| ||  |||||| |||||||||||||    
T  34538422 gtggaaagattgggtttaaaatttcaaaaatttgatgattacgtttttttaatttcagtccctatgtaaaaatgcgtttttcgttttagtccctc 34538328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 6765 - 6870
Alignment:
Q  10 ttggtttttaaatttcaaaattcgatgattacgttttttaatttcat-cctatgtaaatatttg-tttttggttttagtccctcgaataacatcacttat 107  Q
    ||||||||||||  |||||||| |||| |||| |||||||| ||||| ||||||||||| | || ||||||||||||||||||  | |||||| ||||||    
T  6765 ttggtttttaaaaatcaaaatttgatgtttaccttttttaacttcatccctatgtaaatttgtgttttttggttttagtccctgtactaacattacttat 6864  T
Q  108 catctc 113  Q
    ||||||    
T  6865 catctc 6870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 5677 - 5602
Alignment:
Q  10 ttggtttttaaatttcaaaattcgatgattacgttttttaatttcat-cctatgtaaatatttgtttttggtttta 84  Q
    |||||||||||| ||||||||| |||  ||||||||||||||||||| ||||||||||| |   ||||||||||||    
T  5677 ttggtttttaaaattcaaaatttgatttttacgttttttaatttcatccctatgtaaatttgcatttttggtttta 5602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 209
Target Start/End: Complemental strand, 2298 - 2160
Alignment:
Q  72 gtttttggttttagtccctcgaataacatcacttatcatctctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagc 171  Q
    |||||||||||| ||||||| ||| | |||||||||||| | ||| ||||||||||| ||||||||||  |||  || || ||||| || ||| ||| ||    
T  2298 gtttttggttttggtccctcaaatcatatcacttatcatttttcaggccacataagcgtgttttgccacgtcagtaattgccacgtgtgactccgtttgc 2199  T
Q  172 cagcacaacattttt-taacggaagatgacgttagggac 209  Q
    |||| |||| ||||| |||| |||| | |||||||||||    
T  2198 cagctcaacgtttttgtaacagaagttaacgttagggac 2160  T

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Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 33489683 - 33489760
Alignment:
Q  15 ttttaaatttcaaaattcgatgattacgttttttaatttcat-cctatgtaaatatttgtttttggttttagtccctc 91  Q
    ||||||||||||||||| |||||||| ||||||||||| | | |||||||||| ||  ||||||||| ||||||||||    
T  33489683 ttttaaatttcaaaatttgatgattatgttttttaattccgtccctatgtaaaaatgcgtttttggtattagtccctc 33489760  T

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Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 12890449 - 12890373
Alignment:
Q  104 ttatcatctctcatgccacataagcatgttttgccaactcaacaagtgacacgtatgcctctgttagccagcacaac 180  Q
    ||||||||| |||||| |||||||| ||||||||||||||  ||||||||| || || ||| |||||||| ||||||    
T  12890449 ttatcatctttcatgcaacataagcgtgttttgccaactcggcaagtgacatgtgtgactccgttagccatcacaac 12890373  T

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Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 28592323 - 28592257
Alignment:
Q  73 tttttggttttagtccctcgaataacatcacttatcatctctcatgccacataagcatgttttgcca 139  Q
    |||| |||||| ||||||| ||| | |||||||||||||| ||| ||||||||||| ||||||||||    
T  28592323 ttttgggttttggtccctcaaatcatatcacttatcatctgtcaggccacataagcgtgttttgcca 28592257  T

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Target: scaffold1118 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1118
Description:

Target: scaffold1118; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 2659 - 2592
Alignment:
Q  72 gtttttggttttagtccctcgaataacatcacttatcatctctcatgccacataagcatgttttgcca 139  Q
    |||||||||||| ||||||| ||| | |||| ||||||| | ||| ||| ||||||||||||||||||    
T  2659 gtttttggttttcgtccctcaaatcatatcatttatcatatgtcaggccccataagcatgttttgcca 2592  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 28050110 - 28050245
Alignment:
Q  11 tggtttttaaatttcaaaattcgatgattacgtttttt-aatttcatcc-tatgtaaatatttgtttttggttttagtccctcgaataacatcacttatc 108  Q
    |||||||||||||| ||| || |||| |||| |||||| |||||||||| || ||||||||  ||||||  ||||||||||||    ||||  |||||||    
T  28050110 tggtttttaaattttaaattttgatgtttacttttttttaatttcatccctacgtaaatatgcgttttttattttagtccctctgccaacaatacttatc 28050209  T
Q  109 atctctcatgccacataagcatgttttgccaactca 144  Q
    |||||||||| ||  | ||||  |||||||||||||    
T  28050210 atctctcatgtcatctcagcaacttttgccaactca 28050245  T

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