View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10449_high_4 (Length: 335)
Name: NF10449_high_4
Description: NF10449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10449_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 32462050 - 32462372
Alignment:
| Q |
1 |
tcggtgcataatttatgcacaccatgttctagcttacttcctactaccaccactacgagataagttttttcccctccacaaatctgctgacagaatgaat |
100 |
Q |
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| T |
32462050 |
tcggtgcataatttatgcacaccatgttctagcttacttcccactaccaccactacgagataagttttttcccctccacaaatctgctgacagaatgaat |
32462149 |
T |
|
| Q |
101 |
gctgttaacgttttgaatatatatagaagttcatttgttccataaaaatggttattgcttctttaattaaaaaggttcccccaaagcagataagggcagg |
200 |
Q |
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||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
32462150 |
gcttttaacgttttgaatataaa--gaagttcatttgttccataaaaatggttattgcttctttaattaaaaaggttccaacaaagcagataagggcagg |
32462247 |
T |
|
| Q |
201 |
gcaacaatttccttagcagggtgcatatctgcattttctaactctagtttttctagatcactccaggtacactagatcactccaggtagactataaaaaa |
300 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |
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| T |
32462248 |
gcaacaatttccttagcaggttgcatatctgcattttctaactctagtttttctagatcactccaggtagactagatcactgcaggtagactataaaaaa |
32462347 |
T |
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| Q |
301 |
tgactattacttttttcatcctatg |
325 |
Q |
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||||||||| ||||||||||||||| |
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| T |
32462348 |
tgactattaattttttcatcctatg |
32462372 |
T |
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