View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10449_low_9 (Length: 250)
Name: NF10449_low_9
Description: NF10449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10449_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 31 - 240
Target Start/End: Complemental strand, 43008787 - 43008578
Alignment:
| Q |
31 |
atacatatttcatttgacataaatctctcttagataaattttgaagaatgaaaataagagaatcaaattgcttttgattatctatttaaattgatccatt |
130 |
Q |
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| T |
43008787 |
atacatatttcatttgacataaatctctcttagataaattttgaagaatgaaaataagagaatcaaattgcttttgattatctatttaaattgatctatt |
43008688 |
T |
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| Q |
131 |
gtactaaaccaaaccaatggagcccacatatcttaatagagccctatatatctactcattattctttccctcatctctgtttgcaattgcattgcataca |
230 |
Q |
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| T |
43008687 |
gtactaaaccaaaccaatggagcccacatatcttaatagagctctatatatctactcattattctttccctcatctttgtttgcaattgcattgcataca |
43008588 |
T |
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| Q |
231 |
tattcctttg |
240 |
Q |
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|||||||||| |
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| T |
43008587 |
tattcctttg |
43008578 |
T |
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