View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10450_low_10 (Length: 292)
Name: NF10450_low_10
Description: NF10450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10450_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 29 - 280
Target Start/End: Original strand, 30785962 - 30786212
Alignment:
| Q |
29 |
attctaaataggattttgattatgtttaatagatatgtatatgctttgatgactaattataggtttgattgtgaaattactttcgttaattataatcacg |
128 |
Q |
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| T |
30785962 |
attctaaataggattttgattatgtttaatagatatgtatatgctttgatgattaattataggtttgattgtgaaattacttttgttaattataatcacg |
30786061 |
T |
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| Q |
129 |
tgttaaacaatttaataatgcatttcttgttataataccatgaaacatcgctgctggaatctgtgacagaaacattgccagtataccatgaaacaatgaa |
228 |
Q |
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| T |
30786062 |
t-ttaaacaatttaataatgaatttcttgttataataccatgtaacatcgctgctggaatctgtgacagaaacattgccagtataccatgaaacaatgaa |
30786160 |
T |
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| Q |
229 |
gttgcaacaatgcatcgaacatgtttgttgtttggtttttcgccatccttca |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30786161 |
gttgcaacaatgcatcgaacatgtttgttgtttggtttttcgccatccttca |
30786212 |
T |
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