View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10450_low_4 (Length: 426)

Name: NF10450_low_4
Description: NF10450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10450_low_4
NF10450_low_4
[»] chr7 (49 HSPs)
chr7 (1-320)||(46023923-46024242)
chr7 (3-214)||(30428875-30429084)
chr7 (38-188)||(46573387-46573537)
chr7 (55-214)||(15974840-15974999)
chr7 (77-179)||(33797968-33798070)
chr7 (101-214)||(5757388-5757502)
chr7 (120-214)||(48690897-48690991)
chr7 (125-214)||(12279747-12279836)
chr7 (120-214)||(28396724-28396818)
chr7 (125-214)||(12279643-12279732)
chr7 (125-214)||(48305239-48305327)
chr7 (151-214)||(25778839-25778902)
chr7 (101-187)||(32090607-32090693)
chr7 (120-178)||(48691030-48691088)
chr7 (126-190)||(44141226-44141290)
chr7 (38-88)||(48691112-48691162)
chr7 (151-214)||(763699-763763)
chr7 (151-214)||(16933244-16933308)
chr7 (151-214)||(16938627-16938691)
chr7 (151-214)||(30884222-30884286)
chr7 (151-214)||(31660071-31660135)
chr7 (151-214)||(41911109-41911173)
chr7 (151-214)||(46358522-46358586)
chr7 (170-209)||(34228607-34228646)
chr7 (170-209)||(45478517-45478556)
chr7 (38-88)||(28396842-28396892)
chr7 (38-88)||(48305356-48305406)
chr7 (151-214)||(20000674-20000738)
chr7 (170-209)||(11732044-11732083)
chr7 (170-209)||(16933137-16933176)
chr7 (170-209)||(16938520-16938559)
chr7 (170-209)||(30884116-30884155)
chr7 (170-209)||(31365273-31365312)
chr7 (170-209)||(31660202-31660241)
chr7 (151-190)||(34875516-34875555)
chr7 (170-209)||(35737081-35737120)
chr7 (170-209)||(41065770-41065809)
chr7 (170-209)||(41911006-41911045)
chr7 (170-209)||(43742251-43742290)
chr7 (170-209)||(46358653-46358692)
chr7 (170-209)||(47340280-47340319)
chr7 (170-209)||(48692053-48692092)
chr7 (170-209)||(48830602-48830641)
chr7 (156-213)||(24359874-24359932)
chr7 (148-177)||(27335626-27335655)
chr7 (151-187)||(32090587-32090623)
chr7 (154-190)||(35736975-35737011)
chr7 (154-190)||(39007652-39007688)
chr7 (148-188)||(46346713-46346753)
[»] chr1 (46 HSPs)
chr1 (2-214)||(18056786-18056996)
chr1 (2-214)||(23319936-23320156)
chr1 (38-214)||(22348041-22348217)
chr1 (2-214)||(45889598-45889810)
chr1 (38-178)||(179646-179786)
chr1 (44-177)||(8402204-8402337)
chr1 (101-214)||(16115853-16115966)
chr1 (77-175)||(30802437-30802535)
chr1 (101-214)||(37639343-37639457)
chr1 (101-214)||(35198131-35198245)
chr1 (151-214)||(23921898-23921961)
chr1 (125-223)||(51420338-51420436)
chr1 (154-214)||(4097911-4097972)
chr1 (151-214)||(11421596-11421660)
chr1 (151-214)||(24635928-24635992)
chr1 (151-214)||(25889028-25889092)
chr1 (151-214)||(49936937-49937001)
chr1 (151-214)||(50351805-50351869)
chr1 (170-209)||(11422573-11422612)
chr1 (170-209)||(23920973-23921012)
chr1 (151-188)||(34369689-34369726)
chr1 (151-214)||(18618837-18618901)
chr1 (151-214)||(19897760-19897824)
chr1 (151-214)||(20434722-20434786)
chr1 (154-213)||(23175525-23175585)
chr1 (151-214)||(28375466-28375530)
chr1 (151-214)||(43452544-43452608)
chr1 (151-214)||(48762331-48762395)
chr1 (170-209)||(16976088-16976127)
chr1 (170-209)||(23174404-23174443)
chr1 (170-209)||(23817443-23817482)
chr1 (170-209)||(24636059-24636098)
chr1 (151-190)||(31529665-31529704)
chr1 (151-190)||(33097432-33097471)
chr1 (170-209)||(42133946-42133985)
chr1 (170-209)||(43452675-43452714)
chr1 (151-190)||(44260545-44260584)
chr1 (170-209)||(45890596-45890635)
chr1 (170-209)||(48762225-48762264)
chr1 (170-209)||(49936831-49936870)
chr1 (156-213)||(21256777-21256835)
chr1 (152-190)||(51801734-51801772)
chr1 (154-214)||(6314117-6314178)
chr1 (151-214)||(16975956-16976020)
chr1 (126-214)||(19841488-19841576)
chr1 (181-209)||(24368626-24368654)
[»] chr8 (39 HSPs)
chr8 (5-214)||(32987301-32987508)
chr8 (2-214)||(39021977-39022189)
chr8 (2-214)||(15260702-15260915)
chr8 (38-214)||(7058116-7058292)
chr8 (38-212)||(4836588-4836762)
chr8 (38-212)||(4842033-4842207)
chr8 (38-190)||(8550530-8550682)
chr8 (77-191)||(7614093-7614207)
chr8 (120-214)||(1208711-1208805)
chr8 (51-140)||(2750101-2750190)
chr8 (101-190)||(15181817-15181906)
chr8 (151-214)||(42433703-42433766)
chr8 (151-214)||(10237356-10237420)
chr8 (151-214)||(19784273-19784337)
chr8 (151-214)||(41099184-41099248)
chr8 (151-214)||(43690642-43690706)
chr8 (156-213)||(9852273-9852331)
chr8 (156-213)||(34648133-34648191)
chr8 (154-214)||(1150026-1150087)
chr8 (149-214)||(40012180-40012245)
chr8 (173-209)||(2751241-2751277)
chr8 (151-214)||(15227032-15227096)
chr8 (151-214)||(30413916-30413980)
chr8 (151-214)||(34633321-34633385)
chr8 (151-214)||(41451107-41451171)
chr8 (170-209)||(1149917-1149956)
chr8 (38-88)||(1208829-1208877)
chr8 (170-209)||(4835520-4835559)
chr8 (170-209)||(15808887-15808926)
chr8 (170-209)||(34633215-34633254)
chr8 (170-209)||(35301631-35301670)
chr8 (170-209)||(39657710-39657749)
chr8 (170-208)||(1209789-1209827)
chr8 (156-213)||(35302591-35302649)
chr8 (126-214)||(17061468-17061556)
chr8 (126-214)||(17221109-17221197)
chr8 (126-214)||(17586802-17586890)
chr8 (170-210)||(27506707-27506747)
chr8 (154-190)||(40247288-40247324)
[»] scaffold0097 (1 HSPs)
scaffold0097 (2-214)||(13615-13825)
[»] chr2 (30 HSPs)
chr2 (2-214)||(20709776-20709986)
chr2 (37-214)||(18297997-18298174)
chr2 (38-214)||(25192894-25193070)
chr2 (120-214)||(14551288-14551381)
chr2 (101-174)||(4281738-4281811)
chr2 (101-214)||(25995288-25995402)
chr2 (129-198)||(4579796-4579865)
chr2 (125-190)||(5098743-5098808)
chr2 (151-214)||(8149833-8149897)
chr2 (151-214)||(8154457-8154521)
chr2 (38-88)||(4579713-4579763)
chr2 (151-214)||(7487254-7487318)
chr2 (151-214)||(15016566-15016630)
chr2 (151-214)||(39355037-39355101)
chr2 (170-209)||(15150294-15150333)
chr2 (151-216)||(34464711-34464777)
chr2 (126-175)||(36636912-36636961)
chr2 (155-214)||(2263575-2263635)
chr2 (151-214)||(9143587-9143651)
chr2 (170-209)||(1292073-1292112)
chr2 (170-209)||(7487148-7487187)
chr2 (156-214)||(18762869-18762928)
chr2 (170-209)||(25575325-25575364)
chr2 (170-209)||(39355168-39355207)
chr2 (170-209)||(41345089-41345128)
chr2 (170-209)||(42364494-42364533)
chr2 (157-190)||(40853685-40853718)
chr2 (170-210)||(19246663-19246703)
chr2 (154-190)||(39548069-39548105)
chr2 (125-161)||(43822409-43822445)
[»] scaffold0194 (1 HSPs)
scaffold0194 (2-214)||(27609-27821)
[»] chr4 (62 HSPs)
chr4 (9-219)||(27764237-27764449)
chr4 (2-190)||(4168384-4168572)
chr4 (5-213)||(22181100-22181307)
chr4 (2-214)||(21097142-21097354)
chr4 (5-214)||(38485526-38485733)
chr4 (38-214)||(26447299-26447475)
chr4 (38-214)||(45255977-45256155)
chr4 (38-214)||(51836977-51837153)
chr4 (77-212)||(36621627-36621762)
chr4 (37-187)||(637883-638031)
chr4 (2-123)||(18923352-18923471)
chr4 (101-214)||(50563679-50563792)
chr4 (218-293)||(11366448-11366523)
chr4 (151-214)||(50643745-50643808)
chr4 (151-217)||(29826606-29826672)
chr4 (126-177)||(6386516-6386567)
chr4 (140-213)||(1729604-1729678)
chr4 (154-214)||(53441322-53441383)
chr4 (151-214)||(1621877-1621941)
chr4 (151-214)||(10472499-10472563)
chr4 (151-214)||(13635725-13635789)
chr4 (151-214)||(15051136-15051200)
chr4 (151-214)||(26578189-26578253)
chr4 (151-214)||(30597701-30597765)
chr4 (151-214)||(36011845-36011909)
chr4 (151-214)||(46672441-46672505)
chr4 (151-214)||(49492512-49492576)
chr4 (151-214)||(51921265-51921329)
chr4 (154-214)||(49426060-49426121)
chr4 (151-214)||(11785976-11786040)
chr4 (151-214)||(11798143-11798207)
chr4 (151-214)||(35291548-35291612)
chr4 (170-210)||(49492405-49492445)
chr4 (151-214)||(55765483-55765547)
chr4 (170-209)||(10473651-10473690)
chr4 (170-209)||(11786107-11786146)
chr4 (170-209)||(11798274-11798313)
chr4 (170-209)||(13635619-13635658)
chr4 (170-209)||(15051030-15051069)
chr4 (170-209)||(22180208-22180247)
chr4 (151-190)||(25574128-25574167)
chr4 (170-209)||(25715730-25715769)
chr4 (170-209)||(26577263-26577302)
chr4 (170-209)||(30358840-30358879)
chr4 (170-209)||(30597832-30597871)
chr4 (170-209)||(31762931-31762970)
chr4 (170-209)||(36309620-36309659)
chr4 (170-209)||(45256898-45256937)
chr4 (170-209)||(49425951-49425990)
chr4 (170-209)||(50644673-50644712)
chr4 (170-209)||(54895406-54895445)
chr4 (170-208)||(638997-639035)
chr4 (156-190)||(30357834-30357868)
chr4 (104-146)||(48077817-48077859)
chr4 (168-214)||(48077862-48077908)
chr4 (156-212)||(38010145-38010202)
chr4 (170-207)||(42788678-42788715)
chr4 (170-210)||(8157292-8157332)
chr4 (151-214)||(27865737-27865801)
chr4 (173-209)||(38563967-38564003)
chr4 (170-202)||(50562679-50562711)
chr4 (181-209)||(53526253-53526281)
[»] chr5 (31 HSPs)
chr5 (5-216)||(13362770-13362989)
chr5 (2-214)||(23335555-23335770)
chr5 (55-214)||(28070057-28070216)
chr5 (2-216)||(25017085-25017282)
chr5 (2-117)||(42512273-42512388)
chr5 (38-179)||(2826956-2827095)
chr5 (100-216)||(16668743-16668860)
chr5 (101-215)||(18465506-18465621)
chr5 (120-214)||(34329129-34329223)
chr5 (101-176)||(8948930-8949003)
chr5 (125-190)||(33868182-33868247)
chr5 (148-193)||(42512222-42512267)
chr5 (151-214)||(13552985-13553049)
chr5 (151-214)||(15416666-15416730)
chr5 (151-212)||(14940356-14940418)
chr5 (170-210)||(703731-703771)
chr5 (151-214)||(14394470-14394534)
chr5 (151-214)||(26637837-26637901)
chr5 (151-214)||(30783437-30783501)
chr5 (170-209)||(3883929-3883968)
chr5 (170-209)||(14394601-14394640)
chr5 (170-209)||(14940250-14940289)
chr5 (170-209)||(22672000-22672039)
chr5 (174-209)||(23948588-23948623)
chr5 (170-209)||(26637731-26637770)
chr5 (170-209)||(39086519-39086558)
chr5 (170-209)||(39166343-39166382)
chr5 (152-190)||(4674987-4675025)
chr5 (154-214)||(3884038-3884099)
chr5 (154-190)||(16552642-16552678)
chr5 (151-214)||(37456682-37456746)
[»] chr3 (48 HSPs)
chr3 (38-203)||(52987537-52987702)
chr3 (38-214)||(51362326-51362501)
chr3 (2-214)||(8718103-8718323)
chr3 (2-214)||(9069990-9070210)
chr3 (38-215)||(50754007-50754182)
chr3 (38-214)||(7045188-7045363)
chr3 (50-214)||(19385214-19385378)
chr3 (2-214)||(39099191-39099413)
chr3 (79-212)||(16277342-16277475)
chr3 (101-177)||(23699367-23699443)
chr3 (101-177)||(23717822-23717898)
chr3 (101-177)||(23736278-23736354)
chr3 (101-214)||(23755287-23755394)
chr3 (125-178)||(17627205-17627258)
chr3 (151-214)||(3475407-3475471)
chr3 (151-214)||(9595980-9596044)
chr3 (151-214)||(19284673-19284737)
chr3 (151-214)||(33414013-33414077)
chr3 (151-214)||(46237758-46237822)
chr3 (151-214)||(47335034-47335098)
chr3 (41-80)||(31852242-31852281)
chr3 (156-213)||(51846785-51846843)
chr3 (154-214)||(54379165-54379226)
chr3 (151-214)||(2941926-2941990)
chr3 (151-214)||(9106269-9106333)
chr3 (151-214)||(26662538-26662602)
chr3 (245-293)||(27927342-27927390)
chr3 (170-210)||(50755195-50755235)
chr3 (170-209)||(3475301-3475340)
chr3 (170-209)||(6097578-6097617)
chr3 (170-209)||(8719140-8719179)
chr3 (170-209)||(9071027-9071066)
chr3 (170-209)||(9106400-9106439)
chr3 (170-209)||(9595874-9595913)
chr3 (170-209)||(10986485-10986524)
chr3 (170-209)||(19284804-19284843)
chr3 (170-209)||(30947805-30947844)
chr3 (170-209)||(34562401-34562440)
chr3 (170-209)||(36185728-36185767)
chr3 (170-209)||(54379295-54379334)
chr3 (170-208)||(2941821-2941859)
chr3 (156-213)||(41192355-41192413)
chr3 (154-214)||(30947914-30947975)
chr3 (151-188)||(47728417-47728454)
chr3 (151-188)||(53594997-53595034)
chr3 (151-214)||(6097684-6097748)
chr3 (170-210)||(27446216-27446256)
chr3 (170-210)||(47924369-47924409)
[»] chr6 (23 HSPs)
chr6 (38-214)||(33346258-33346434)
chr6 (38-186)||(24737580-24737726)
chr6 (38-178)||(877246-877384)
chr6 (101-214)||(29157228-29157341)
chr6 (117-214)||(34399643-34399740)
chr6 (118-214)||(15034942-15035038)
chr6 (101-219)||(18611185-18611304)
chr6 (141-214)||(35119241-35119310)
chr6 (158-213)||(12394387-12394442)
chr6 (151-214)||(1449544-1449608)
chr6 (151-214)||(1536896-1536960)
chr6 (151-214)||(31216664-31216728)
chr6 (170-209)||(1449675-1449714)
chr6 (151-212)||(6900807-6900869)
chr6 (156-213)||(30908655-30908713)
chr6 (151-214)||(7089084-7089148)
chr6 (126-214)||(28116830-28116918)
chr6 (170-209)||(6900936-6900975)
chr6 (170-209)||(7765407-7765446)
chr6 (170-209)||(15493307-15493346)
chr6 (170-209)||(22857680-22857719)
chr6 (170-209)||(34869957-34869996)
chr6 (151-214)||(34870086-34870150)
[»] scaffold0238 (1 HSPs)
scaffold0238 (67-214)||(25148-25295)
[»] scaffold0544 (1 HSPs)
scaffold0544 (125-214)||(10649-10738)
[»] scaffold0337 (1 HSPs)
scaffold0337 (125-213)||(7020-7108)
[»] scaffold0189 (1 HSPs)
scaffold0189 (154-214)||(11193-11253)
[»] scaffold0571 (2 HSPs)
scaffold0571 (151-214)||(676-740)
scaffold0571 (170-209)||(547-586)
[»] scaffold0045 (1 HSPs)
scaffold0045 (151-214)||(33686-33750)
[»] scaffold0050 (1 HSPs)
scaffold0050 (171-209)||(20979-21017)
[»] scaffold0581 (1 HSPs)
scaffold0581 (151-214)||(8421-8485)
[»] scaffold0004 (1 HSPs)
scaffold0004 (170-210)||(96000-96040)
[»] scaffold0074 (1 HSPs)
scaffold0074 (170-209)||(24407-24446)
[»] scaffold0338 (1 HSPs)
scaffold0338 (170-210)||(6516-6556)
[»] scaffold0031 (1 HSPs)
scaffold0031 (181-209)||(80881-80909)


Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 46024242 - 46023923
Alignment:
Q  1 aatctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagt 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46024242 aatctgagttcttcgttttcttttccaaaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagt 46024143  T
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatg 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  46024142 ttgatttaatgtagtttgagaagtctaggattattacacgtgtacactatatctgatggttgtgaagtgtttatgcacggtgcataaggattttcttgtg 46024043  T
Q  201 caccataacttttgtcaagaatatgtgtatgcgtgtggcttgtttttgaaaaatcaatccaaaatatgatatgaaccaaatagttttcagaagnnnnnnn 300  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||           
T  46024042 caccataacttttgccaagaatatgtgtatgcgtgtggtttgtttttgaaaaatcaatccaaaatataatatgaaccaaatagttttcagaagaaaaaaa 46023943  T
Q  301 tatagaatcgcattcaatga 320  Q
    ||||||||||||||||||||    
T  46023942 tatagaatcgcattcaatga 46023923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 3 - 214
Target Start/End: Complemental strand, 30429084 - 30428875
Alignment:
Q  3 tctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagttt 102  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || |||||  |||||||||||||||||| |||| |||||||||||||||||||    
T  30429084 tctgagttcttcgttttcttttctagaatgttgaaaattgtagagagagggggag--ctttatgttttagtgagataaatgtttgaagcaaatgaagttt 30428987  T
Q  103 gatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgca 202  Q
    |||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  30428986 gatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaaatgtttatgcacggtgcataaggatttccttatgca 30428887  T
Q  203 ccataacttttg 214  Q
    ||||||||||||    
T  30428886 ccataacttttg 30428875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 46573387 - 46573537
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  46573387 aattgtagatagagagggagagctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattac 46573486  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataag 188  Q
    ||||||||| |||||||||||||||||||||||||||  ||| ||||||||    
T  46573487 acgtgtacactagatctgatggttgtgaagtgtttatatacggtgcataag 46573537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 55 - 214
Target Start/End: Original strand, 15974840 - 15974999
Alignment:
Q  55 gagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatct 154  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||| ||| ||| |||||||||| ||||||| || || |    
T  15974840 gagagctttatgttttagtgagagaaatgtttgaagcagatgaagtttgatttggtgtactttgataagcctaagattattacatgtgtacactaaatat 15974939  T
Q  155 gatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  15974940 gatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 15974999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 33798070 - 33797968
Alignment:
Q  77 agaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgc 176  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||    
T  33798070 agaaatgtttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtatactagatctgatggttgtgaaatgtttatgc 33797971  T
Q  177 acg 179  Q
    |||    
T  33797970 acg 33797968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 101 - 214
Target Start/End: Complemental strand, 5757502 - 5757388
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttat 199  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| | | ||||||    
T  5757502 ttgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggaaatgtcttat 5757403  T
Q  200 gcaccataacttttg 214  Q
    |||  ||||||||||    
T  5757402 gcataataacttttg 5757388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 48690991 - 48690897
Alignment:
Q  120 gaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    |||| ||| |||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||||||||||  |||||||||||||||||||    
T  48690991 gaagcctatgattattacacgtgtacactagatttgatggttgtgaactgtttatgcacggtgcataaggatttctttatgcaccataacttttg 48690897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 12279836 - 12279747
Alignment:
Q  125 ctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||| ||||||||| |||| ||||||| ||||||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||    
T  12279836 ctaggatcattacacgtatacactagatctaatggttgtgaagtctttatgcacggtgcataaagatttccttatgcaccataacttttg 12279747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 28396818 - 28396724
Alignment:
Q  120 gaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    |||| ||||||||||||| | |||||| ||||||||||| ||||||| |||||||||||| ||||||||||||| |||||||| | |||||||||    
T  28396818 gaagcctaggattattactcttgtacactagatctgatgattgtgaaatgtttatgcacggtgcataaggatttccttatgcatcgtaacttttg 28396724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 12279732 - 12279643
Alignment:
Q  125 ctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||| |||||||||||||| | ||||| ||||||||||||| ||||| |||| ||||||| ||||| |||||| |||||||||||||    
T  12279732 ctaggatcattacacgtgtacactggatctaatggttgtgaagtctttatacacggtgcataatgatttccttatgtaccataacttttg 12279643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 48305327 - 48305239
Alignment:
Q  125 ctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    |||||||||||| ||||||||| |||||| |||| |||| ||||||||||||||| ||||||||||  | ||||||||||||||||||||    
T  48305327 ctaggattattatacgtgtacactagatccgatgtttgtaaagtgtttatgcacggtgcataagga-atccttatgcaccataacttttg 48305239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 25778902 - 25778839
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||||||||||||| ||||||||  |||||||| |||||||||||||||||||||||||    
T  25778902 atctgatggttgtgaagtgcttatgcacagtgcataagaattttcttatgcaccataacttttg 25778839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 32090693 - 32090607
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataa 187  Q
    |||||||| |||||||||||||| ||| |||||||||||||||| | ||||| |||||||| |||| |||||||||| | |||||||    
T  32090693 ttgatttggtgtagtttgagaagcctatgattattacacgtgtatactagatttgatggttctgaattgtttatgcagggtgcataa 32090607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 48691088 - 48691030
Alignment:
Q  120 gaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcac 178  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  48691088 gaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtctatgcac 48691030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 44141226 - 44141290
Alignment:
Q  126 taggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    ||||||||||||||||||||| || ||| ||||||||||||||||||||||| | ||||||||||    
T  44141226 taggattattacacgtgtacactaaatcagatggttgtgaagtgtttatgcagggtgcataagga 44141290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 48691162 - 48691112
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttga 88  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| |||||    
T  48691162 aattgtagagagagagggagagctttatgttttagtgagagaaatttttga 48691112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 763763 - 763699
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  763763 atctgatggttgtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 763699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 16933244 - 16933308
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  16933244 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 16933308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 16938627 - 16938691
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  16938627 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 16938691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 30884222 - 30884286
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  30884222 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 30884286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 31660135 - 31660071
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  31660135 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 31660071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 41911109 - 41911173
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  41911109 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 41911173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 46358586 - 46358522
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  46358586 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 46358522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 34228646 - 34228607
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  34228646 tttatgcacggtgcataaggattttcttatgcaccataac 34228607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 45478517 - 45478556
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  45478517 tttatgcaagatgcataaggattttcttatgcaccataac 45478556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 28396892 - 28396842
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttga 88  Q
    ||||| ||||| |||||||||||||||||||||| |||||||||| |||||    
T  28396892 aattgcagagagagagggagaactttatgttttattgagagaaatgtttga 28396842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 48305406 - 48305356
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttga 88  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||| |||||    
T  48305406 aattgtagagagagagggagagctttatgttttattgagagaaatgtttga 48305356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 20000674 - 20000738
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataag-gattttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||  | |  ||||||||||||||||||||    
T  20000674 atctgatggttgtgatgtgtttatgcacggtgcataagtaaatgacttatgcaccataacttttg 20000738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 11732083 - 11732044
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  11732083 tttatgcacggtgcataaggatttccttatgcaccataac 11732044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 16933176 - 16933137
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  16933176 tttatgcacggtgcataaggatttccttatgcaccataac 16933137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 16938559 - 16938520
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  16938559 tttatgcacggtgcataaggatttccttatgcaccataac 16938520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 30884155 - 30884116
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  30884155 tttatgcacggtgcataaggatttccttatgcaccataac 30884116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 31365312 - 31365273
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  31365312 tttatgcaagatgcataaggatttccttatgcaccataac 31365273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 31660202 - 31660241
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  31660202 tttatgcacggtgcataaggatttccttatgcaccataac 31660241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 34875555 - 34875516
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  34875555 atctgatggttgtgaagtgtttatgcagggtgcataagga 34875516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 35737081 - 35737120
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  35737081 tttatgcacggtgcataaggatttccttatgcaccataac 35737120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 41065809 - 41065770
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  41065809 tttatgcaggatgcataaagattttcttatgcaccataac 41065770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 41911045 - 41911006
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  41911045 tttatgcacggtgcataaggatttccttatgcaccataac 41911006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 43742290 - 43742251
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  43742290 tttatgcaggatgcataaggatttccttatgcaccataac 43742251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 46358653 - 46358692
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  46358653 tttatgcacggtgcataaggatttccttatgcaccataac 46358692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 47340280 - 47340319
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  47340280 tttatgcacggtgcataaggatttccttatgcaccataac 47340319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 48692053 - 48692092
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  48692053 tttatgcacggtgcataaggatttccttatgcaccataac 48692092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 48830602 - 48830641
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  48830602 tttatgcacggtgcataaggatttccttatgcaccataac 48830641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 24359932 - 24359874
Alignment:
Q  156 atggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataactttt 213  Q
    |||||||||||||||| ||||||| ||||||||| | |  |||||||||||||||||||    
T  24359932 atggttgtgaagtgttgatgcacggtgcataaggaaatgacttatgcaccataactttt 24359874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 177
Target Start/End: Original strand, 27335626 - 27335655
Alignment:
Q  148 tagatctgatggttgtgaagtgtttatgca 177  Q
    ||||||||||||||||||||||||||||||    
T  27335626 tagatctgatggttgtgaagtgtttatgca 27335655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 32090587 - 32090623
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataa 187  Q
    ||||||||||||||||||||||||||||  |||||||    
T  32090587 atctgatggttgtgaagtgtttatgcaccctgcataa 32090623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 35737011 - 35736975
Alignment:
Q  154 tgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  35737011 tgatggttgtgatgtgtttatgcacggtgcataagga 35736975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 39007652 - 39007688
Alignment:
Q  154 tgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    |||||||||||||||||||||||| | ||||||||||    
T  39007652 tgatggttgtgaagtgtttatgcagggtgcataagga 39007688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 46346713 - 46346753
Alignment:
Q  148 tagatctgatggttgtgaagtgtttatgcacgatgcataag 188  Q
    ||||| ||||||||||||||||||||| || ||||||||||    
T  46346713 tagatatgatggttgtgaagtgtttatacaggatgcataag 46346753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 4e-91; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 18056996 - 18056786
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||  |||||||||||||||||||||| ||||||||||||||||||    
T  18056996 atctgagttcttcgttttcttttccagaatgttgaaaattgtagaga--gagggagagttttatgttttagtgagagaaatgtttgaagcaaatgaagtt 18056899  T
Q  102 tgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgc 201  Q
    ||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  18056898 tgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgc 18056799  T
Q  202 accataacttttg 214  Q
    |||||||||||||    
T  18056798 accataacttttg 18056786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 23319936 - 23320156
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtt 101  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| ||||||| | ||||||||||||||||||||||| ||| ||||||||||||||    
T  23319936 atctgagttcttcgttttcttttccagaattttgaaaatagtagagaaagagggatagctttatgttttagtgagagaaatgtttaaagcaaatgaagtt 23320035  T
Q  102 tgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgat--------gcataaggattt 193  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||        ||||||||||||    
T  23320036 tgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcatgatacctaagagcataaggattt 23320135  T
Q  194 tcttatgcaccataacttttg 214  Q
     ||||||||||||||||||||    
T  23320136 ccttatgcaccataacttttg 23320156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 38 - 214
Target Start/End: Complemental strand, 22348217 - 22348041
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  22348217 aattgtagagagagagggagagctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattac 22348118  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||    
T  22348117 acgtgtacactagatatgatggttgtgaagtgtttatgcgcggtgcataaggatttccttatgcaccataacttttg 22348041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 45889810 - 45889598
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtt 101  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||    
T  45889810 atctgagttcttcgttttctttttcagaatattgaaaattgtagagagagagggagaactttatgttttagtgagagaaatgtttgaaggaaatgaaatt 45889711  T
Q  102 tgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgc 201  Q
    ||||||| |||||||||||||| ||| ||||||||||| |||| | |||||||||||||||| || |||||||||||| || ||||| |||| |||||||    
T  45889710 tgatttggtgtagtttgagaagcctaagattattacacatgtatactagatctgatggttgtaaaatgtttatgcacggtggataagaatttccttatgc 45889611  T
Q  202 accataacttttg 214  Q
    |||||| ||||||    
T  45889610 accataccttttg 45889598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 38 - 178
Target Start/End: Complemental strand, 179786 - 179646
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||  | ||||||||||    
T  179786 aattgtagagagagagggagagctttatgttttagtgagagaaatgttttaagcaaatgaagtttgatttggtgtagtttgagaagcttgggattattac 179687  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcac 178  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  179686 acgtgtacactagatctgatggttgtgaagtgtttatgcac 179646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 8402204 - 8402337
Alignment:
Q  44 agagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgt 143  Q
    ||||| |||| |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||||||  |||||||||||||| ||||    
T  8402204 agagagagagagagagctttatgttttagtgagagaaatgtttgaagcagatgaagtttgatttggtttagtttgagaaacctaggattattacatgtgt 8402303  T
Q  144 acattagatctgatggttgtgaagtgtttatgca 177  Q
    ||| |||||||||||||| |||||||||||||||    
T  8402304 acactagatctgatggttatgaagtgtttatgca 8402337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 101 - 214
Target Start/End: Complemental strand, 16115966 - 16115853
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatg 200  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||    
T  16115966 ttgatttggtgtagtttaagaagtcttggattattacacgtgtacattagatttgatggttgtgaagtgtttatgcacggtgcataaggatttccttatg 16115867  T
Q  201 caccataacttttg 214  Q
    ||  ||||||||||    
T  16115866 catgataacttttg 16115853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 77 - 175
Target Start/End: Complemental strand, 30802535 - 30802437
Alignment:
Q  77 agaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatg 175  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  30802535 agaaatatttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaagattattacacgtgtacactagatctgatggttgtgaaatgtttatg 30802437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 101 - 214
Target Start/End: Complemental strand, 37639457 - 37639343
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttat 199  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||| | | ||||||    
T  37639457 ttgatttggtgtagtttgagaagtctataattattacacgtgtacactagatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgtcttat 37639358  T
Q  200 gcaccataacttttg 214  Q
    |||  ||||||||||    
T  37639357 gcataataacttttg 37639343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 101 - 214
Target Start/End: Original strand, 35198131 - 35198245
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttat 199  Q
    |||||||  |||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | ||||||||| | | ||||||    
T  35198131 ttgattttgtgtagtttgaaaagtctaggattattacacgtgtacactagatctgatggctgtgaagtgtttatgcagggtgcataaggaaatgtcttat 35198230  T
Q  200 gcaccataacttttg 214  Q
    |||  ||||||||||    
T  35198231 gcataataacttttg 35198245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 23921898 - 23921961
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| ||||||||||    
T  23921898 atctgatggttatgaagtgcttatgcacgatgcataaggatttccttatgcacaataacttttg 23921961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 223
Target Start/End: Complemental strand, 51420436 - 51420338
Alignment:
Q  125 ctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcat-aaggattttcttatgcaccataacttttgtcaagaata 223  Q
    ||||||||||||| |||||| | || |||||||||||||||| |||||||||| ||||||| ||| |||  ||||||||  |||||||||||||| ||||    
T  51420436 ctaggattattactcgtgtataataaatctgatggttgtgaa-tgtttatgcaggatgcataaagaattgacttatgcataataacttttgtcaacaata 51420338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 4097911 - 4097972
Alignment:
Q  154 tgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||||||||||||||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  4097911 tgatggttgtgaagtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttg 4097972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 11421660 - 11421596
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||||||||||||||||| ||||||||| | |   |||||||||||||||||||    
T  11421660 atctgatggttgtgaagtgtttatgcacggtgcataaggaaatgatttatgcaccataacttttg 11421596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 24635992 - 24635928
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  24635992 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 24635928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 25889028 - 25889092
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  25889028 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttg 25889092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 49936937 - 49937001
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  49936937 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 49937001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 50351869 - 50351805
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  50351869 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 50351805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 11422573 - 11422612
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  11422573 tttatgcacgatgcataaggatttccttatgcaccataac 11422612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 23921012 - 23920973
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  23921012 tttatgcacgatgcataaggatttccttatgcaccataac 23920973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 34369726 - 34369689
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataag 188  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  34369726 atctgatggttgtgaagtgtttatgcacggtgcataag 34369689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 18618901 - 18618837
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |   |||||||||||||||||||    
T  18618901 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataatttatgcaccataacttttg 18618837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 19897760 - 19897824
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||||||||||||||  |||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  19897760 atctgatggttgtgatatgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 19897824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 20434722 - 20434786
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||| |||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  20434722 atctaatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 20434786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 23175525 - 23175585
Alignment:
Q  154 tgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataactttt 213  Q
    ||||||||||||||||||||||||||  |||||||| | |  |||||||||||||||||||    
T  23175525 tgatggttgtgaagtgtttatgcacggcgcataaggaaatggcttatgcaccataactttt 23175585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 28375530 - 28375466
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataaggatttt-cttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||| ||  |  ||||||||||||||||||||    
T  28375530 atctgatggttgtgatgtgtttatgcacggtgcataaagaaataacttatgcaccataacttttg 28375466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 43452608 - 43452544
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||| ||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  43452608 atctgatagttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 43452544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 48762331 - 48762395
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||| |||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  48762331 atctaatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 48762395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 16976088 - 16976127
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  16976088 tttatgcacggtgcataaggatttccttatgcaccataac 16976127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 23174443 - 23174404
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  23174443 tttatgcacggtgcataagaattttcttatgcaccataac 23174404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 23817443 - 23817482
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  23817443 tttatgcacggtgcataaggatttccttatgcaccataac 23817482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 24636059 - 24636098
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  24636059 tttatgcacggtgcataaggatttccttatgcaccataac 24636098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 31529665 - 31529704
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  31529665 atctgatggttgtgaagtgtttatgcatggtgcataagga 31529704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 33097471 - 33097432
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  33097471 atctgatggttgtgaagtgtttatgcagggtgcataagga 33097432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 42133985 - 42133946
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  42133985 tttatgcaggatgcataaggatttccttatgcaccataac 42133946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 43452675 - 43452714
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  43452675 tttatgcacggtgcataaggatttccttatgcaccataac 43452714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 44260584 - 44260545
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  44260584 atctgatggttgtgaagtgtttatgcagggtgcataagga 44260545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 45890596 - 45890635
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||||||||| |||||||||    
T  45890596 tttatgcacggtgcataaggattttcttatacaccataac 45890635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 48762264 - 48762225
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  48762264 tttatgcacggtgcataaggatttccttatgcaccataac 48762225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 49936870 - 49936831
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  49936870 tttatgcacggtgcataaggatttccttatgcaccataac 49936831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 21256777 - 21256835
Alignment:
Q  156 atggttgtgaagtgtttatgcacgatgcataag-gattttcttatgcaccataactttt 213  Q
    |||||||||||||||||||||||| ||||||||  | |  |||||||||||||||||||    
T  21256777 atggttgtgaagtgtttatgcacggtgcataagaaaatggcttatgcaccataactttt 21256835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 51801734 - 51801772
Alignment:
Q  152 tctgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  51801734 tctgatggttgtgaagtgtttatgcagggtgcataagga 51801772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 6314178 - 6314117
Alignment:
Q  154 tgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||||| ||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  6314178 tgatggctgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 6314117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 16976020 - 16975956
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| |||||||| |||| ||||||||| | |  |||||| |||||||||||||    
T  16976020 atctgatggttgtgatgtgtttatacacggtgcataaggaaataacttatgaaccataacttttg 16975956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 214
Target Start/End: Complemental strand, 19841576 - 19841488
Alignment:
Q  126 taggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||||||| |||| || | |||||||||| |||||||   ||||||| | ||||||||   |  ||||||||||||||||||||    
T  19841576 taggattattacaagtgtccaattgatctgatggctgtgaagaccttatgcatggtgcataagttatggcttatgcaccataacttttg 19841488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 209
Target Start/End: Original strand, 24368626 - 24368654
Alignment:
Q  181 tgcataaggattttcttatgcaccataac 209  Q
    |||||||||||||||||||||||||||||    
T  24368626 tgcataaggattttcttatgcaccataac 24368654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 3e-89; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 5 - 214
Target Start/End: Original strand, 32987301 - 32987508
Alignment:
Q  5 tgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttga 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||| |||||||| |||||||||||||||||||||    
T  32987301 tgagttcttcgttttcttttccagaatgttgaaaattgtagaga--gagggagagctttatgttttagttagagaaatgtttgaagcaaatgaagtttga 32987398  T
Q  105 tttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcacc 204  Q
    |||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  32987399 tttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcacc 32987498  T
Q  205 ataacttttg 214  Q
    ||||||||||    
T  32987499 ataacttttg 32987508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 39022189 - 39021977
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtt 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  39022189 atctaagttcttcgttttcttttccagaatgttgaaaattgtagagagagagggagagctttatgttttagtgagataaatgtttgaagcaaatgaagtt 39022090  T
Q  102 tgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgc 201  Q
    ||||||| |||||||||||||| ||||||||||||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||||| |||||||    
T  39022089 tgatttggtgtagtttgagaagcctaggattattacacatgtacactagatctgatgattgtgaagtgtttatgcacggtgcataaggatttccttatgc 39021990  T
Q  202 accataacttttg 214  Q
    |||||||||||||    
T  39021989 accataacttttg 39021977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 15260702 - 15260915
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  15260702 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagagagagggagagttttatattttagtgagagaaatatttgaagcaaatgaagtt 15260801  T
Q  102 tgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatg 200  Q
    ||||||| |||||||||||||| || ||||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||||||||| |  | ||||||    
T  15260802 tgatttggtgtagtttgagaagccttggattattaaacgtgtacactagatttgatggttgtgaagtgtttatgcacggtgcataaggaaaatccttatg 15260901  T
Q  201 caccataacttttg 214  Q
    ||||||||||||||    
T  15260902 caccataacttttg 15260915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 38 - 214
Target Start/End: Complemental strand, 7058292 - 7058116
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7058292 aattgtagagagagagggagagctttatgttttagtgagagaagtgtttgaagcaaatgaagtttgatttggtgtagtttgagaagtctaggattattac 7058193  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  7058192 acgtgtacactagatcggatggttgtgaagtgtttatgcacggtgcataagtatttccttatgcaccataacttttg 7058116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 38 - 212
Target Start/End: Original strand, 4836588 - 4836762
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    ||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||| |||  ||||||||||||    
T  4836588 aattgtagagagagagggagagctttatgttttagtgagataaatgtttgaagcaaatgaagtttgatttggtgtagtttgaaaagcttaggattattac 4836687  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttt 212  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||  |||||||||||||||||    
T  4836688 acgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagcatttctttatgcaccataacttt 4836762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 38 - 212
Target Start/End: Original strand, 4842033 - 4842207
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    ||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||| |||  ||||||||||||    
T  4842033 aattgtagagagagagggagagctttatgttttagtgagataaatgtttgaagcaaatgaagtttgatttggtgtagtttgaaaagcttaggattattac 4842132  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttt 212  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||  |||||||||||||||||    
T  4842133 acgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagcatttctttatgcaccataacttt 4842207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 38 - 190
Target Start/End: Complemental strand, 8550682 - 8550530
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||  || |||||||||    
T  8550682 aattgtagagaaagagggagaactttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtaatttgagaagcttatgattattac 8550583  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  8550582 acgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagga 8550530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 7614207 - 7614093
Alignment:
Q  77 agaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgc 176  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7614207 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctatgattattacacgtgtacattagatctgatggttgtgaagtgtttatgc 7614108  T
Q  177 acgatgcataaggat 191  Q
    | | |||||||||||    
T  7614107 atggtgcataaggat 7614093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 1208805 - 1208711
Alignment:
Q  120 gaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    |||| |||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  1208805 gaagcctaggattattacacgtgtacactagatcttatggttgtaaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 1208711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 2750190 - 2750101
Alignment:
Q  51 gagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattacacg 140  Q
    |||||||| | ||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  2750190 gagggagagcattatgttttagtgagagaaatgtttaaagtaaatgaagtttgatttggtgtagtttgagaagtctatgattattacacg 2750101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 15181906 - 15181817
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    |||||||| |||||||||||||  ||| |||||||||||||||||| ||||||||||| |||||||||||||||||| | ||||||||||    
T  15181906 ttgatttggtgtagtttgagaaacctaagattattacacgtgtacactagatctgatgcttgtgaagtgtttatgcagggtgcataagga 15181817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 42433766 - 42433703
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||    
T  42433766 atctgatggttgtgaagtgcttatgcacggtgcataaggatttccttatgcaccataacttttg 42433703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 10237420 - 10237356
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  10237420 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 10237356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 19784337 - 19784273
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  19784337 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 19784273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 41099248 - 41099184
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  41099248 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 41099184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 43690706 - 43690642
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  43690706 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 43690642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 9852331 - 9852273
Alignment:
Q  156 atggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataactttt 213  Q
    |||||||||||||||||||||||| ||||||||| | |  |||||||||||||||||||    
T  9852331 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataactttt 9852273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 34648133 - 34648191
Alignment:
Q  156 atggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataactttt 213  Q
    |||||||||||||||||||||||| ||||||||| | |  |||||||||||||||||||    
T  34648133 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataactttt 34648191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 1150026 - 1150087
Alignment:
Q  154 tgatggttgtgaagtgtttatgcacgatgcataa-ggattttcttatgcaccataacttttg 214  Q
    |||||||||||| ||||||||||||| ||||||| ||| |  ||||||||||||||||||||    
T  1150026 tgatggttgtgatgtgtttatgcacggtgcataagggaataacttatgcaccataacttttg 1150087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 40012180 - 40012245
Alignment:
Q  149 agatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||| ||||||||| |||| |||||||| | ||||||||||  | ||||||||||||||||||||    
T  40012180 agatccgatggttgtaaagtctttatgcatggtgcataaggaaatccttatgcaccataacttttg 40012245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 2751241 - 2751277
Alignment:
Q  173 atgcacgatgcataaggattttcttatgcaccataac 209  Q
    ||||||| |||||||||||||||||||||||||||||    
T  2751241 atgcacggtgcataaggattttcttatgcaccataac 2751277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 15227096 - 15227032
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||| | ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  15227096 atctgatggttgtaatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 15227032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 30413980 - 30413916
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  |||||||| |||||||||||    
T  30413980 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcagcataacttttg 30413916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 34633321 - 34633385
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  |||||| |||||||||||||    
T  34633321 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgtaccataacttttg 34633385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 41451171 - 41451107
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||||||| |||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  41451171 atctgatgattgtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 41451107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 1149956 - 1149917
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  1149956 tttatgcacggtgcataaggatttccttatgcaccataac 1149917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 1208877 - 1208829
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttga 88  Q
    |||||||||||  |||||||| ||||||||||||||||||||||| |||||    
T  1208877 aattgtagaga--gagggagagctttatgttttagtgagagaaatgtttga 1208829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 4835559 - 4835520
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  4835559 tttatgcacggtgcataaggatttccttatgcaccataac 4835520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 15808926 - 15808887
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  15808926 tttatgcagggtgcataaggattttcttatgcaccataac 15808887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 34633254 - 34633215
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  34633254 tttatgcacggtgcataaggatttccttatgcaccataac 34633215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 35301670 - 35301631
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  35301670 tttatgcacggtgcataaggatttccttatgcaccataac 35301631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 39657749 - 39657710
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  39657749 tttatgcacggtgcataaggatttccttatgcaccataac 39657710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 1209789 - 1209827
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataa 208  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  1209789 tttatgcacggtgcataaggatttccttatgcaccataa 1209827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 35302591 - 35302649
Alignment:
Q  156 atggttgtgaagtgtttatgcacgatgcataag-gattttcttatgcaccataactttt 213  Q
    |||||||||||||||||||||||| ||||||||  | | || |||||||||||||||||    
T  35302591 atggttgtgaagtgtttatgcacggtgcataagaaaatgtcctatgcaccataactttt 35302649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 214
Target Start/End: Original strand, 17061468 - 17061556
Alignment:
Q  126 taggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||||||| |||| || | |||||||||| |||||||   ||||||| | ||||||||   |  ||||||||||||||||||||    
T  17061468 taggattattacaagtgtccaattgatctgatggctgtgaagaccttatgcatggtgcataagttatggcttatgcaccataacttttg 17061556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 214
Target Start/End: Complemental strand, 17221197 - 17221109
Alignment:
Q  126 taggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||||||| |||| || | |||||||||| |||||||   ||||||| | ||||||||   |  ||||||||||||||||||||    
T  17221197 taggattattacaagtgtccaattgatctgatggctgtgaagaccttatgcatggtgcataagttatggcttatgcaccataacttttg 17221109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 214
Target Start/End: Complemental strand, 17586890 - 17586802
Alignment:
Q  126 taggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||||||| |||| || | |||||||||| |||||||   ||||||| | ||||||||   |  ||||||||||||||||||||    
T  17586890 taggattattacaagtgtccaattgatctgatggctgtgaagaccttatgcatggtgcataagttatggcttatgcaccataacttttg 17586802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 27506747 - 27506707
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataact 210  Q
    |||||||| | ||||||||||||| ||||||||||||||||    
T  27506747 tttatgcagggtgcataaggatttccttatgcaccataact 27506707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 40247288 - 40247324
Alignment:
Q  154 tgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    |||||||||||||||||||||||| | ||||||||||    
T  40247288 tgatggttgtgaagtgtttatgcagggtgcataagga 40247324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 158; Significance: 6e-84; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 13825 - 13615
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtt 101  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13825 atctgagttcttcgttttcttttccagagagttgaaaattgtagaga--gagggagaactttatgttttagtgagagaaatgtttgaagcaaatgaagtt 13728  T
Q  102 tgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgc 201  Q
    ||||||| ||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||||||||||||||||| || |||||||||| |||||||    
T  13727 tgatttggtgtagtttgagaagcgtaggattattacatgtgtacactagatctgatggttgtgaagtgtttatgcacggtggataaggatttccttatgc 13628  T
Q  202 accataacttttg 214  Q
    |||||||||||||    
T  13627 accataacttttg 13615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 158; Significance: 6e-84; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 20709986 - 20709776
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtt 101  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20709986 atctgagttcttcgttttcttttccagagagttgaaaattgtagaga--gagggagaactttatgttttagtgagagaaatgtttgaagcaaatgaagtt 20709889  T
Q  102 tgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgc 201  Q
    ||||||| ||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||||||||||||||||| || |||||||||| |||||||    
T  20709888 tgatttggtgtagtttgagaagcgtaggattattacatgtgtacactagatctgatggttgtgaagtgtttatgcacggtggataaggatttccttatgc 20709789  T
Q  202 accataacttttg 214  Q
    |||||||||||||    
T  20709788 accataacttttg 20709776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 37 - 214
Target Start/End: Original strand, 18297997 - 18298174
Alignment:
Q  37 aaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattatta 136  Q
    |||||||||||| |||||||||  |||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  18297997 aaattgtagagagagagggagagatttatgttttagtgagagaaacgcttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattatta 18298096  T
Q  137 cacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  18298097 cacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 18298174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 38 - 214
Target Start/End: Complemental strand, 25193070 - 25192894
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||| ||||||||    
T  25193070 aattgtagagagagagggagagctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtaatttgagaagcctagaattattac 25192971  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  25192970 acgtgtacactagatctaatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 25192894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 120 - 214
Target Start/End: Original strand, 14551288 - 14551381
Alignment:
Q  120 gaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  14551288 gaagcctaggattattacacatgtacactagatctgatggttgtgaagtgtttatgcacg-tgcataagaatttccttatgcaccataacttttg 14551381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 4281738 - 4281811
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttat 174  Q
    |||||||| |||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4281738 ttgatttgctgtagtttgagaaacctaggattattacacgtgtacactagatctgatggttgtgaagtgtttat 4281811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 101 - 214
Target Start/End: Complemental strand, 25995402 - 25995288
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttat 199  Q
    |||||||| |||| |||||| || |||||||||||||||||||||| || |||||||||||||||||| ||||||||   ||||||||| | | ||||||    
T  25995402 ttgatttggtgtaatttgagtagcctaggattattacacgtgtacactaaatctgatggttgtgaagtatttatgcagagtgcataaggaaatgtcttat 25995303  T
Q  200 gcaccataacttttg 214  Q
    |||  ||||||||||    
T  25995302 gcataataacttttg 25995288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 4579796 - 4579865
Alignment:
Q  129 gattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttctta 198  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||| | ||||||||||||| ||||    
T  4579796 gattattacacgtgtacactagatctgatggttgtaaagtgtttatgcatggtgcataaggatttcctta 4579865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 5098808 - 5098743
Alignment:
Q  125 ctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    |||||||||||||||||||||| || || |||||||||||||||||||||||| | ||||||||||    
T  5098808 ctaggattattacacgtgtacaataaatttgatggttgtgaagtgtttatgcagggtgcataagga 5098743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 8149897 - 8149833
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||    
T  8149897 atctgatggttgtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataacttttg 8149833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 8154521 - 8154457
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||    
T  8154521 atctgatggttgtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataacttttg 8154457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 4579713 - 4579763
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttga 88  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| |||||    
T  4579713 aattgtagagagagagggagagctttatgttttagtgagagaaatgtttga 4579763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 7487254 - 7487318
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  7487254 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttg 7487318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 15016566 - 15016630
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  15016566 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 15016630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 39355101 - 39355037
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  39355101 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 39355037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 15150294 - 15150333
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  15150294 tttatgcaggatgcataaggattttcttatgcaccataac 15150333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 34464777 - 34464711
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttgtc 216  Q
    |||||||||||||||  |||||||||||| ||||||||| | |  ||||||||||||||||||||||    
T  34464777 atctgatggttgtgatatgtttatgcacggtgcataaggaaataacttatgcaccataacttttgtc 34464711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 36636912 - 36636961
Alignment:
Q  126 taggattattacacgtgtacattagatctgatggttgtgaagtgtttatg 175  Q
    ||||||||||||||||||| |  | |||||||||||||||||||||||||    
T  36636912 taggattattacacgtgtaaaacaaatctgatggttgtgaagtgtttatg 36636961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 2263635 - 2263575
Alignment:
Q  155 gatggttgtgaagtgtttatgcacgatgcataaggatttt-cttatgcaccataacttttg 214  Q
    ||||||||||||||||||||||||| ||||||| ||  |  ||||||||||||||||||||    
T  2263635 gatggttgtgaagtgtttatgcacggtgcataaagaaatggcttatgcaccataacttttg 2263575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 9143651 - 9143587
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||||||| |||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  9143651 atctgatgattgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 9143587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 1292112 - 1292073
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  1292112 tttatgcacggtgcataaggatttccttatgcaccataac 1292073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 7487187 - 7487148
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  7487187 tttatgcacggtgcataaggatttccttatgcaccataac 7487148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 18762928 - 18762869
Alignment:
Q  156 atggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  18762928 atggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 18762869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 25575364 - 25575325
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  25575364 tttatgcaggatgcataaggatttccttatgcaccataac 25575325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 39355168 - 39355207
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  39355168 tttatgcacggtgcataaggatttccttatgcaccataac 39355207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 41345128 - 41345089
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  41345128 tttatgcacggtgcataaggatttccttatgcaccataac 41345089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 42364533 - 42364494
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  42364533 tttatgcagggtgcataaggattttcttatgcaccataac 42364494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 40853685 - 40853718
Alignment:
Q  157 tggttgtgaagtgtttatgcacgatgcataagga 190  Q
    ||||||||||||||||||||| ||||||||||||    
T  40853685 tggttgtgaagtgtttatgcaggatgcataagga 40853718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 19246703 - 19246663
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataact 210  Q
    |||||||| | ||||||||||||| ||||||||||||||||    
T  19246703 tttatgcagggtgcataaggatttccttatgcaccataact 19246663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 39548105 - 39548069
Alignment:
Q  154 tgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    |||||||||||||||||||||||| | ||||||||||    
T  39548105 tgatggttgtgaagtgtttatgcagggtgcataagga 39548069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 43822445 - 43822409
Alignment:
Q  125 ctaggattattacacgtgtacattagatctgatggtt 161  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  43822445 ctaggattatcacacgtgtacactagatctgatggtt 43822409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 153; Significance: 6e-81; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 27821 - 27609
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||| ||||||||||||||||||    
T  27821 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagaaagagggagagatttatgttttagtgagagaaatgtttgaagcaaatgaagtt 27722  T
Q  102 tgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgc 201  Q
    ||||||| |||||||||||||| |||| ||||||||||||||||| ||||||| || ||||||||||||||||||||| | ||||||  ||| |||||||    
T  27721 tgatttggtgtagtttgagaagcctagaattattacacgtgtacactagatcttatagttgtgaagtgtttatgcacggtacataagtttttccttatgc 27622  T
Q  202 accataacttttg 214  Q
    |||||||||||||    
T  27621 accataacttttg 27609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 9e-77; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 9 - 219
Target Start/End: Complemental strand, 27764449 - 27764237
Alignment:
Q  9 ttcttcgttttcttttccagaatgttgaaaattgtagagatagag--ggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatt 106  Q
    |||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||| |||||||||||| | ||||||||    
T  27764449 ttcttcgttttctttttcagaatgttgaaaattggagagagagagagggagaactttatgttttagtgagagaaatgtttgaagcaaataaggtttgatt 27764350  T
Q  107 tgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccat 206  Q
    || ||||||||||||||  ||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||    
T  27764349 tggtgtagtttgagaagcgtaggattattacacgtgtacactagatctgatggttgcgaagtgtttatgcacggtgcataaggatttccttatgcaccat 27764250  T
Q  207 aacttttgtcaag 219  Q
    |||||||| ||||    
T  27764249 aacttttgccaag 27764237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 190
Target Start/End: Complemental strand, 4168572 - 4168384
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||| |||||| |||||||||||    
T  4168572 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagtgaaagctttatgttttagtgagagaaatgtttgaaacaaatgaagtt 4168473  T
Q  102 tgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    ||||||| |||||||||||||  |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  4168472 tgatttggtgtagtttgagaaacctaggattattacatgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagga 4168384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 5 - 213
Target Start/End: Original strand, 22181100 - 22181307
Alignment:
Q  5 tgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttga 104  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| | | ||||||||||||||||||||||| ||||| |||||||||||||||    
T  22181100 tgagttcttcgttttcttttccagaatgttgaaa-ttgtagagagagaggaaaagctttatgttttagtgagagaaatgtttgaggcaaatgaagtttga 22181198  T
Q  105 tttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcacc 204  Q
    |||| |||||||||||||  |||||||||||||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  22181199 tttggtgtagtttgagaaacctaggattattacacgtgtacactaaatctgatggttgtgaagtttttatgcacggtgcataaggatttccttatgcacc 22181298  T
Q  205 ataactttt 213  Q
    |||||||||    
T  22181299 ataactttt 22181307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 21097354 - 21097142
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  21097354 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagagagagggagagctttatgttttagtgagagaaatgtttgaagcaaatgaagtt 21097255  T
Q  102 tgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgc 201  Q
    ||||||| |||| ||| | |||  ||| ||||||||||||||| | ||||||| ||||||||||||||||||| |||| ||||||||||||| |||||||    
T  21097254 tgatttggtgtaatttaataagcttagaattattacacgtgtaaactagatctaatggttgtgaagtgtttatacacggtgcataaggatttccttatgc 21097155  T
Q  202 accataacttttg 214  Q
    ||  |||||||||    
T  21097154 acggtaacttttg 21097142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 5 - 214
Target Start/End: Original strand, 38485526 - 38485733
Alignment:
Q  5 tgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgtttt--agtgagagaaatatttgaagcaaatgaagttt 102  Q
    |||||| |||||||| ||||||| ||| |||||||||||||||| ||||||||| |||||||||||  |||||||||||| |||||||||||||||||||    
T  38485526 tgagtttttcgtttttttttccataatattgaaaattgtagagagagagggagatctttatgttttttagtgagagaaatgtttgaagcaaatgaagttt 38485625  T
Q  103 gatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgca 202  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    || ||||||||    
T  38485626 gatttaatgtattttgagaagcctaggattattacacgtgtacattagatctgatggttgtgaagcgtttatgcacggtgcataa----ttccttatgca 38485721  T
Q  203 ccataacttttg 214  Q
    ||||||||||||    
T  38485722 ccataacttttg 38485733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 38 - 214
Target Start/End: Original strand, 26447299 - 26447475
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| |||| |||| |||| ||||||||    
T  26447299 aattgtatagagagagggagaactttatgttttagtgagagaaatgtttgaagcaaatgaaatttgatttggtgtaatttgtgaagcctagaattattac 26447398  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||    
T  26447399 acgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccattacttttg 26447475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 38 - 214
Target Start/End: Complemental strand, 45256155 - 45255977
Alignment:
Q  38 aattgtagagatagagggag--aactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattatt 135  Q
    ||||||||||| |||||| |  | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  45256155 aattgtagagagagagggggggagctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttgatgtagtttgaaaagcctaggattatt 45256056  T
Q  136 acacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||||| || ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  45256055 acacgtgtacactatatctgatagttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 45255977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 38 - 214
Target Start/End: Original strand, 51836977 - 51837153
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaa-tgaagtttgatttgatgtagtttgagaagtctaggattatta 136  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||||| ||||||||||||    
T  51836977 aattgtagagagagagggagagctttatgttttagtgagagaaatgtttgaagtaaaatgaagtttgatttggtgtagtttgagaagcctaggattatta 51837076  T
Q  137 cacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||| |||||||||||||||| ||||||||||||||    
T  51837077 cacgtgtacattaaatctgatggttgtgaagtatttatgctcgatg-ataaggattttcttatacaccataacttttg 51837153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 77 - 212
Target Start/End: Original strand, 36621627 - 36621762
Alignment:
Q  77 agaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgc 176  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36621627 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttaagaagcataggattattacacgtgtacattagatctgatggttgtgaagtgtttatgc 36621726  T
Q  177 acgatgcataaggattttcttatgcaccataacttt 212  Q
    ||| ||||||||||||| ||||||||||||||||||    
T  36621727 acggtgcataaggatttccttatgcaccataacttt 36621762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 37 - 187
Target Start/End: Complemental strand, 638031 - 637883
Alignment:
Q  37 aaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattatta 136  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||  |||||||    
T  638031 aaattgtagaga--gagggagagctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaaaattatta 637934  T
Q  137 cacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataa 187  Q
    ||| |||||| |||||||||||||||||||||||||||||||| |||||||    
T  637933 cacatgtacactagatctgatggttgtgaagtgtttatgcacggtgcataa 637883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 18923471 - 18923352
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtt 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||  |||||| |  ||||||||||||||| |||||||||||||||||||||||||    
T  18923471 atctgagttcttcgttttctttttcagaatgttgaaaattgtagaga--gagggatagttttatgttttagtgacagaaatatttgaagcaaatgaagtt 18923374  T
Q  102 tgatttgatgtagtttgagaag 123  Q
    ||||||| ||||||||||||||    
T  18923373 tgatttggtgtagtttgagaag 18923352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 101 - 214
Target Start/End: Original strand, 50563679 - 50563792
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatg 200  Q
    |||||||| |||||||||||||  |||  ||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| | | | |||||||    
T  50563679 ttgatttggtgtagtttgagaaacctataattattacacgtgtacactagatctgatggttgtgaagtgtttatgcagggtgcatatgaaatatcttatg 50563778  T
Q  201 caccataacttttg 214  Q
    ||  ||||||||||    
T  50563779 cataataacttttg 50563792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 11366523 - 11366448
Alignment:
Q  218 agaatatgtgtatgcgtgtggcttgtttttgaaaaatcaatccaaaatatgatatgaaccaaatagttttcagaag 293  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||| | |||||| |||||    
T  11366523 agaatatgtgtatgcgtgtggtttgtttttgaaaaatcaatccaaaatataatttgaaccagacagtttttagaag 11366448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 50643808 - 50643745
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  50643808 atctgatggttatgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 50643745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 29826606 - 29826672
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttgtca 217  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| |||||| ||||||||||||||||    
T  29826606 atctgatggttgtgaagtgcttatgcacggtgcataaggatttccttatgtaccataacttttgtca 29826672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 6386516 - 6386567
Alignment:
Q  126 taggattattacacgtgtacattagatctgatggttgtgaagtgtttatgca 177  Q
    |||||||||||||||||| || || |||||||||||||||||||||||||||    
T  6386516 taggattattacacgtgtccactaaatctgatggttgtgaagtgtttatgca 6386567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 1729604 - 1729678
Alignment:
Q  140 gtgtacattagatctgatggttgtgaagtgtttatgcacgatgcat-aaggattttcttatgcaccataactttt 213  Q
    ||||||| |||||||||||||||||||||||||||||||| || || ||| | |  |||||||||||||||||||    
T  1729604 gtgtacactagatctgatggttgtgaagtgtttatgcacggtgtataaagaaatgacttatgcaccataactttt 1729678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 53441383 - 53441322
Alignment:
Q  154 tgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||    
T  53441383 tgatggttgtgatgtgtttatgcacgatgcataaggaaataacttatgcaccataacttttg 53441322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 1621941 - 1621877
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  1621941 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 1621877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 10472563 - 10472499
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||||||||||||||| |||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  10472563 atctgatggttgtgaaatgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 10472499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 13635725 - 13635789
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  13635725 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 13635789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 15051136 - 15051200
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  15051136 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 15051200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 26578189 - 26578253
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataaggatttt-cttatgcaccataacttttg 214  Q
    ||||||||||||||||||||||||||||||||||||| ||  |  |||||||||||| |||||||    
T  26578189 atctgatggttgtgaagtgtttatgcacgatgcataaagaaatggcttatgcaccatgacttttg 26578253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 30597765 - 30597701
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  30597765 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 30597701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 36011909 - 36011845
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  36011909 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 36011845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 46672505 - 46672441
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  46672505 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 46672441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 49492512 - 49492576
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  49492512 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 49492576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 51921265 - 51921329
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  51921265 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 51921329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 49426060 - 49426121
Alignment:
Q  154 tgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  49426060 tgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 49426121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 11786040 - 11785976
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |   |||||||||||||||||||    
T  11786040 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggtttatgcaccataacttttg 11785976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 11798207 - 11798143
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |   |||||||||||||||||||    
T  11798207 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggtttatgcaccataacttttg 11798143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 35291548 - 35291612
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||| |||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  35291548 atcttatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 35291612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 49492445 - 49492405
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataact 210  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  49492445 tttatgcacggtgcataaggatttccttatgcaccataact 49492405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 55765547 - 55765483
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||| | ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  55765547 atctgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 55765483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 10473651 - 10473690
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  10473651 tttatgcacggtgcataaggatttccttatgcaccataac 10473690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 11786107 - 11786146
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  11786107 tttatgcacggtgcataaggatttccttatgcaccataac 11786146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 11798274 - 11798313
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  11798274 tttatgcacggtgcataaggatttccttatgcaccataac 11798313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 13635658 - 13635619
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  13635658 tttatgcacggtgcataaggatttccttatgcaccataac 13635619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 15051069 - 15051030
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  15051069 tttatgcacggtgcataaggatttccttatgcaccataac 15051030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 22180247 - 22180208
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  22180247 tttatgcacggtgcataaggatttccttatgcaccataac 22180208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 25574128 - 25574167
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  25574128 atctgatggttgtgaagtgtttatgcagggtgcataagga 25574167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 25715730 - 25715769
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  25715730 tttatgcagggtgcataaggattttcttatgcaccataac 25715769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 26577302 - 26577263
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  26577302 tttatgcacggtgcataaggatttccttatgcaccataac 26577263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 30358840 - 30358879
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  30358840 tttatgcacggtgcataaggatttccttatgcaccataac 30358879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 30597832 - 30597871
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  30597832 tttatgcacggtgcataaggatttccttatgcaccataac 30597871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 31762970 - 31762931
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  31762970 tttatgcaggatgcataaggatttccttatgcaccataac 31762931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 36309620 - 36309659
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  36309620 tttatgcagggtgcataaggattttcttatgcaccataac 36309659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 45256898 - 45256937
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  45256898 tttatgcacggtgcataaggatttccttatgcaccataac 45256937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 49425990 - 49425951
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  49425990 tttatgcacggtgcataaggatttccttatgcaccataac 49425951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 50644673 - 50644712
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  50644673 tttatgcacggtgcataaggatttccttatgcaccataac 50644712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 54895445 - 54895406
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  54895445 tttatgcagggtgcataaggattttcttatgcaccataac 54895406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 638997 - 639035
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataa 208  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  638997 tttatgcacggtgcataaggatttccttatgcaccataa 639035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 190
Target Start/End: Complemental strand, 30357868 - 30357834
Alignment:
Q  156 atggttgtgaagtgtttatgcacgatgcataagga 190  Q
    |||||||||||||||||||||||| ||||||||||    
T  30357868 atggttgtgaagtgtttatgcacggtgcataagga 30357834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 48077817 - 48077859
Alignment:
Q  104 atttgatgtagtttgagaagtctaggattattacacgtgtaca 146  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||    
T  48077817 atttggtgtagtttgagaagcctaggattattacacatgtaca 48077859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 48077862 - 48077908
Alignment:
Q  168 tgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    |||||||||||| ||||||||||||| ||||||||  ||||||||||    
T  48077862 tgtttatgcacggtgcataaggatttccttatgcatgataacttttg 48077908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 38010202 - 38010145
Alignment:
Q  156 atggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttt 212  Q
    |||||||||||||||||||||| | ||||||||| | |  ||||||||||||||||||    
T  38010202 atggttgtgaagtgtttatgcatggtgcataaggaaatgacttatgcaccataacttt 38010145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 42788678 - 42788715
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccata 207  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  42788678 tttatgcaggatgcataaggatttccttatgcaccata 42788715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 8157292 - 8157332
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataact 210  Q
    |||||||| | ||||||||||||| ||||||||||||||||    
T  8157292 tttatgcagggtgcataaggatttccttatgcaccataact 8157332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 27865737 - 27865801
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| |||||| || | |  ||||||||| ||||||||||    
T  27865737 atctgatggttgtgatgtgtttatgcacggtgcatatggaaatggcttatgcactataacttttg 27865801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 38563967 - 38564003
Alignment:
Q  173 atgcacgatgcataaggattttcttatgcaccataac 209  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  38563967 atgcaggatgcataaggatttttttatgcaccataac 38564003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 202
Target Start/End: Complemental strand, 50562711 - 50562679
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgca 202  Q
    |||||||||||||||||||||||| ||||||||    
T  50562711 tttatgcacgatgcataaggatttccttatgca 50562679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 53526281 - 53526253
Alignment:
Q  181 tgcataaggattttcttatgcaccataac 209  Q
    |||||||||||||||||||||||||||||    
T  53526281 tgcataaggattttcttatgcaccataac 53526253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 143; Significance: 6e-75; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 13362989 - 13362770
Alignment:
Q  5 tgagttcttcgttttcttttccagaatgttgaaaattgtagagatagag--------ggagaactttatgttttagtgagagaaatatttgaagcaaatg 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||        ||| | ||||||||||||||||||||||| |||||||||||||    
T  13362989 tgagttcttcgttttcttttccagaatgttgaaaattgtagagagagagagacagagggaaagctttatgttttagtgagagaaatgtttgaagcaaatg 13362890  T
Q  97 aagtttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttct 196  Q
    || ||||||||| |||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  13362889 aattttgatttggtgtagtttgagaagcctatgattattacacgtatacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttcct 13362790  T
Q  197 tatgcaccataacttttgtc 216  Q
    ||||||||||||||||||||    
T  13362789 tatgcaccataacttttgtc 13362770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 23335555 - 23335770
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagag--ggagaactttatgtttt-agtgagagaaatatttgaagcaaatgaa 98  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||| ||||  ||||| ||||||||||| |||||||||||| ||||| |||||||||    
T  23335555 atctgagttctttgttttcttttccataatgttgaaaattgtagagagagagagggagagctttatgtttttagtgagagaaatgtttgatgcaaatgaa 23335654  T
Q  99 gtttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttctta 198  Q
     ||||||||| |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||| |||||| ||||    
T  23335655 ctttgatttggtgtagtttgagaagcctatgattattacacgtgtacactagatctgatggttgtgaaatgtttatgcacggtgcatacggatttcctta 23335754  T
Q  199 tgcaccataacttttg 214  Q
    ||||||||||||||||    
T  23335755 tgcaccataacttttg 23335770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 55 - 214
Target Start/End: Original strand, 28070057 - 28070216
Alignment:
Q  55 gagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatct 154  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  28070057 gagagctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatct 28070156  T
Q  155 gatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  28070157 gatagttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 28070216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 216
Target Start/End: Original strand, 25017085 - 25017282
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtt 101  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||| ||||||||||||||        
T  25017085 atctgagtacttcgttttcttttccagaatgttgaaaattgtagaga--gagggagagctttatgttttagtgagagaaatgtttgaagcaaatga---- 25017178  T
Q  102 tgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgc 201  Q
               ||||||||||  |||  ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  25017179 -----------agtttgagaaacctaaaattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgc 25017267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 42512388 - 42512273
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||    
T  42512388 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagagagagggagagctttaggttttagtgagagaaatgtttgaagtaaatgaagtt 42512289  T
Q  102 tgatttgatgtagttt 117  Q
    ||||||| ||||||||    
T  42512288 tgatttggtgtagttt 42512273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 2826956 - 2827095
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    |||||||||||  |||||||| |||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||| ||| ||| |||||    
T  2826956 aattgtagaga--gagggagagctttatgttttagtgagataaatgtttgaagcaaatgaaatttgatttggtgtagtttgagaagcctaagataattac 2827053  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcacg 179  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  2827054 acgtgtacactagatctgatggttgtaaagtgtttatgcacg 2827095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 16668743 - 16668860
Alignment:
Q  100 tttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataagg-attttctta 198  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||| | | |||||    
T  16668743 tttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgtctta 16668842  T
Q  199 tgcaccataacttttgtc 216  Q
    ||||  ||||||||||||    
T  16668843 tgcataataacttttgtc 16668860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 101 - 215
Target Start/End: Original strand, 18465506 - 18465621
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataa-ggattttcttat 199  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| | | | ||||||    
T  18465506 ttgatttggtgtagtttgagaagtctaagattattacacgtgtacactagatctgatggttgtgaagtgtttatgcaggatgcataatgaaatgtcttat 18465605  T
Q  200 gcaccataacttttgt 215  Q
    |||  |||||||||||    
T  18465606 gcataataacttttgt 18465621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 34329223 - 34329129
Alignment:
Q  120 gaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    |||| ||| ||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  34329223 gaagcctatgattattattcgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaagatttccttatgcaccataacttttg 34329129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 8949003 - 8948930
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgc 176  Q
    |||||||| |||||||||||||| ||||||||||  |||||||||| || ||||||| ||| ||||||||||||||    
T  8949003 ttgatttggtgtagtttgagaagcctaggattat--cacgtgtacactaaatctgatagttttgaagtgtttatgc 8948930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 33868247 - 33868182
Alignment:
Q  125 ctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    ||||||||||||||| |||| | || ||| ||||||||||||||||||||||| | ||||||||||    
T  33868247 ctaggattattacacatgtaaaataaatcagatggttgtgaagtgtttatgcagggtgcataagga 33868182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 42512267 - 42512222
Alignment:
Q  148 tagatctgatggttgtgaagtgtttatgcacgatgcataaggattt 193  Q
    |||||||||||||||||||||||||||||||| || ||||||||||    
T  42512267 tagatctgatggttgtgaagtgtttatgcacggtggataaggattt 42512222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 13553049 - 13552985
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  13553049 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 13552985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 15416730 - 15416666
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  15416730 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 15416666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 14940356 - 14940418
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttt 212  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||    
T  14940356 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 14940418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 703771 - 703731
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataact 210  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  703771 tttatgcaggatgcataaggatttccttatgcaccataact 703731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 14394534 - 14394470
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| || |||||||||| ||||||||| | |  ||||||||||||||||||||    
T  14394534 atctgatggttgtgatgtatttatgcacggtgcataaggaaataacttatgcaccataacttttg 14394470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 26637837 - 26637901
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataag-gattttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||  | |  ||||||||||||||||||||    
T  26637837 atctgatggttgtgatgtgtttatgcacggtgcataagaaaatggcttatgcaccataacttttg 26637901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 30783501 - 30783437
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||||||||||| || ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  30783501 atctgatggttgcgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 30783437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 3883968 - 3883929
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  3883968 tttatgcacggtgcataaggatttccttatgcaccataac 3883929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 14394601 - 14394640
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  14394601 tttatgcacggtgcataaggatttccttatgcaccataac 14394640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 14940289 - 14940250
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  14940289 tttatgcacggtgcataaggatttccttatgcaccataac 14940250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 22672000 - 22672039
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  22672000 tttatgcaggatgcataaggatttccttatgcaccataac 22672039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 23948588 - 23948623
Alignment:
Q  174 tgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||| |||||||||||||||||||||||||||||    
T  23948588 tgcacggtgcataaggattttcttatgcaccataac 23948623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 26637770 - 26637731
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  26637770 tttatgcacggtgcataaggatttccttatgcaccataac 26637731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 39086558 - 39086519
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  39086558 tttatgcagggtgcataaggattttcttatgcaccataac 39086519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 39166343 - 39166382
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  39166343 tttatgcagggtgcataaggattttcttatgcaccataac 39166382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 4675025 - 4674987
Alignment:
Q  152 tctgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  4675025 tctgatggttgtgaagtgtttatgcagggtgcataagga 4674987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 3884038 - 3884099
Alignment:
Q  154 tgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||||||||| | ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  3884038 tgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 3884099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 16552642 - 16552678
Alignment:
Q  154 tgatggttgtgaagtgtttatgcacgatgcataagga 190  Q
    |||||||||||||||||||||||| | ||||||||||    
T  16552642 tgatggttgtgaagtgtttatgcatggtgcataagga 16552678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 37456746 - 37456682
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataaggatttt-cttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||| ||| ||||||||||  |  || |||||||||||||||||    
T  37456746 atctgatggttgtgatgtgtttatgtacggtgcataaggaaatggctcatgcaccataacttttg 37456682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 5e-72; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 38 - 203
Target Start/End: Original strand, 52987537 - 52987702
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  52987537 aattgtagagagagagggagagctttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattac 52987636  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcac 203  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  52987637 acgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcac 52987702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 38 - 214
Target Start/End: Original strand, 51362326 - 51362501
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    ||||||||||| ||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  51362326 aattgtagagagagaggga-aagtttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattac 51362424  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||| || ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  51362425 acgtgtacactaaatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 51362501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 8718323 - 8718103
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaa--------ctttatgttttagtgagagaaatatttgaagcaa 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||         ||||||||||||||||||||||| ||| || |||    
T  8718323 atctgatttcttcgttttcttttccagaatgttgaaaattgtagagagagagagagagagggaaagctttatgttttagtgagagaaatgttttaaacaa 8718224  T
Q  94 atgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattt 193  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||| |||||| ||| |||||||||||||    
T  8718223 atgaagtttgatttggtgtagtttaagaagcctaggattattacacatgtacactagatctgatggttgtgaagtatttatgtacggtgcataaggattt 8718124  T
Q  194 tcttatgcaccataacttttg 214  Q
     ||||||||||||||||||||    
T  8718123 ccttatgcaccataacttttg 8718103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 9070210 - 9069990
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagagggagaa--------ctttatgttttagtgagagaaatatttgaagcaa 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||         ||||||||||||||||||||||| ||| || |||    
T  9070210 atctgatttcttcgttttcttttccagaatgttgaaaattgtagagagagagagagagagggaaagctttatgttttagtgagagaaatgttttaaacaa 9070111  T
Q  94 atgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattt 193  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||| |||||| ||| |||||||||||||    
T  9070110 atgaagtttgatttggtgtagtttaagaagcctaggattattacacatgtacactagatctgatggttgtgaagtatttatgtacggtgcataaggattt 9070011  T
Q  194 tcttatgcaccataacttttg 214  Q
     ||||||||||||||||||||    
T  9070010 ccttatgcaccataacttttg 9069990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 38 - 215
Target Start/End: Complemental strand, 50754182 - 50754007
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    |||||||||||  |||||||| ||||||||||||||||||||| | |||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  50754182 aattgtagaga--gagggagagctttatgttttagtgagagaagtgtttgaatcaaatgaagtttgatttggtgtagtttgagaagcctaggattattac 50754085  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttgt 215  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||    
T  50754084 acgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgtaccataacttttgt 50754007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 38 - 214
Target Start/End: Original strand, 7045188 - 7045363
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||| ||| |||||||||    
T  7045188 aattgtagagagagagggagagctttatgttttagtgagagaaatgtttgaagcaaat-aagtttgatttgatgtagtctgagaagcctacgattattac 7045286  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||| ||||||||||||||||||||||||||| |||| |||||||| |||| ||||||||||||||||||||    
T  7045287 acgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttg 7045363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 50 - 214
Target Start/End: Original strand, 19385214 - 19385378
Alignment:
Q  50 agagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtacatta 149  Q
    |||||||||  |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||    
T  19385214 agagggagagttttatgttttagtgagggaaatgattgaagcaaatgaagtttgatttgatgtagtttgagaagcctagaattattacacgtgtacacta 19385313  T
Q  150 gatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  19385314 aatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 19385378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 39099413 - 39099191
Alignment:
Q  2 atctgagttcttcgttttcttttccagaatgttgaaaattgtagagatagag--ggagaactttatgttttagtgagagaaatatttgaagcaaatgaag 99  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||| ||||  ||||| ||||||||||||||||||||||| ||| || |||||||||    
T  39099413 atctgagttcttcattttttcttcgagaatgttgaaaattgtagagaaagagagggagagctttatgttttagtgagagaaatgttttaaacaaatgaag 39099314  T
Q  100 tttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataagg--------at 191  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| | |||||||||| |||||||||        ||    
T  39099313 tttgatttagtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaaatatttatgcacggtgcataaggaaataagaat 39099214  T
Q  192 tttcttatgcaccataacttttg 214  Q
    |||||||||||||||||||||||    
T  39099213 tttcttatgcaccataacttttg 39099191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 16277342 - 16277475
Alignment:
Q  79 aaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcac 178  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  16277342 aaatgtttgaaacaaatgaagtttgatttggtgtagtttgagaagcgtaggattattacacgtgtacactagatatgatggttgtgaagtgtttatgcac 16277441  T
Q  179 gatgcataaggattttcttatgcaccataacttt 212  Q
    | ||||||| ||||| ||||||||||||||||||    
T  16277442 ggtgcataaagatttccttatgcaccataacttt 16277475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 23699443 - 23699367
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgca 177  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23699443 ttgatttgatgtagtttgaaaagcctaggattattacacgtgtacattagatatgatggttgtgaagtgtttatgca 23699367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 23717898 - 23717822
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgca 177  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23717898 ttgatttgatgtagtttgaaaagcctaggattattacacgtgtacattagatatgatggttgtgaagtgtttatgca 23717822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 23736354 - 23736278
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgca 177  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23736354 ttgatttgatgtagtttgaaaagcctaggattattacacgtgtacattagatatgatggttgtgaagtgtttatgca 23736278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 101 - 214
Target Start/End: Complemental strand, 23755394 - 23755287
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttat 199  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||       |||||||||||||||||||| | ||||||||| | | ||||||    
T  23755394 ttgatttgatgtaatttgagaagcctaggattattacacgtgtacattag-------ggttgtgaagtgtttatgcagggtgcataaggaaatgtcttat 23755302  T
Q  200 gcaccataacttttg 214  Q
    |||  ||||||||||    
T  23755301 gcataataacttttg 23755287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 17627205 - 17627258
Alignment:
Q  125 ctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcac 178  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17627205 ctagaattattacacgtgtacactagatctgatggttgtgaagtgtttatgcac 17627258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 3475407 - 3475471
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  3475407 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 3475471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 9595980 - 9596044
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  9595980 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttg 9596044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 19284737 - 19284673
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  19284737 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 19284673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 33414013 - 33414077
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  33414013 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 33414077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 46237758 - 46237822
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  46237758 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 46237822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 47335098 - 47335034
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  47335098 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 47335034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 31852281 - 31852242
Alignment:
Q  41 tgtagagatagagggagaactttatgttttagtgagagaa 80  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  31852281 tgtagagagagagggagaactttatgttttagtgagagaa 31852242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 51846785 - 51846843
Alignment:
Q  156 atggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataactttt 213  Q
    |||||||||||||||||||||||| ||||||||| | |  |||||||||||||||||||    
T  51846785 atggttgtgaagtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 51846843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 54379226 - 54379165
Alignment:
Q  154 tgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  54379226 tgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 54379165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 2941926 - 2941990
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| | ||||||| | |  ||||||||||||||||||||    
T  2941926 atctgatggttgtgatgtgtttatgcacggtacataaggaaataacttatgcaccataacttttg 2941990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 9106333 - 9106269
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||| | ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  9106333 atctgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 9106269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 26662538 - 26662602
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||| ||||||||||    
T  26662538 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcacaataacttttg 26662602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 27927390 - 27927342
Alignment:
Q  245 tttgaaaaatcaatccaaaatatgatatgaaccaaatagttttcagaag 293  Q
    |||||||||||||| |||||||| || ||||||||| ||||||||||||    
T  27927390 tttgaaaaatcaattcaaaatataatttgaaccaaacagttttcagaag 27927342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 50755195 - 50755235
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataact 210  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  50755195 tttatgcacggtgcataaggatttccttatgcaccataact 50755235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 3475340 - 3475301
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  3475340 tttatgcacggtgcataaggatttccttatgcaccataac 3475301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 6097617 - 6097578
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  6097617 tttatgcacggtgcataaggatttccttatgcaccataac 6097578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 8719140 - 8719179
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  8719140 tttatgcacggtgcataaggatttccttatgcaccataac 8719179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 9071027 - 9071066
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  9071027 tttatgcacggtgcataaggatttccttatgcaccataac 9071066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 9106400 - 9106439
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  9106400 tttatgcacggtgcataaggatttccttatgcaccataac 9106439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 9595913 - 9595874
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  9595913 tttatgcacggtgcataaggatttccttatgcaccataac 9595874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 10986485 - 10986524
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  10986485 tttatgcacggtgcataaggatttccttatgcaccataac 10986524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 19284804 - 19284843
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  19284804 tttatgcacggtgcataaggatttccttatgcaccataac 19284843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 30947844 - 30947805
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  30947844 tttatgcacggtgcataaggatttccttatgcaccataac 30947805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 34562440 - 34562401
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  34562440 tttatgcacggtgcataaggatttccttatgcaccataac 34562401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 36185767 - 36185728
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  36185767 tttatgcaggatgcataaggatttccttatgcaccataac 36185728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 54379295 - 54379334
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  54379295 tttatgcacggtgcataaggatttccttatgcaccataac 54379334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 2941859 - 2941821
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataa 208  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  2941859 tttatgcacggtgcataaggatttccttatgcaccataa 2941821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 41192355 - 41192413
Alignment:
Q  156 atggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataactttt 213  Q
    |||||||||||||||||||| ||| ||||||||| | |  |||||||||||||||||||    
T  41192355 atggttgtgaagtgtttatgtacggtgcataaggaaatgacttatgcaccataactttt 41192413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 30947914 - 30947975
Alignment:
Q  154 tgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||| |||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  30947914 tgatgattgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 30947975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 47728454 - 47728417
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataag 188  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  47728454 atctgatggttgtgaagtgtttatgcagggtgcataag 47728417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 53595034 - 53594997
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataag 188  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  53595034 atctgatggttgtgaagtgtttatgcagggtgcataag 53594997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 6097684 - 6097748
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||| ||| ||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  6097684 atctgatagttatgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 6097748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 27446216 - 27446256
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataact 210  Q
    |||||||| | ||||||||||||| ||||||||||||||||    
T  27446216 tttatgcaaggtgcataaggatttccttatgcaccataact 27446256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 47924369 - 47924409
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataact 210  Q
    |||||||| | ||||||||||||| ||||||||||||||||    
T  47924369 tttatgcagggtgcataaggatttccttatgcaccataact 47924409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 5e-69; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 38 - 214
Target Start/End: Original strand, 33346258 - 33346434
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||  ||||||||    
T  33346258 aattgtagagagagagggagaactttatgttttagtgagagaaatgtttgaagcaaacgaagtttgatttgacgtagtttgagaagcctataattattac 33346357  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  33346358 acgtgtacactagatttgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 33346434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 38 - 186
Target Start/End: Original strand, 24737580 - 24737726
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    |||||||||||  ||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||| |||||||||||||    
T  24737580 aattgtagaga--gagggagagttttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttaagaagcctaggattattac 24737677  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcata 186  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  24737678 acgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcata 24737726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 38 - 178
Target Start/End: Complemental strand, 877384 - 877246
Alignment:
Q  38 aattgtagagatagagggagaactttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattac 137  Q
    |||||||||||  |||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||  || ||||||||     
T  877384 aattgtagaga--gagggagagctttttgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcttatgattattat 877287  T
Q  138 acgtgtacattagatctgatggttgtgaagtgtttatgcac 178  Q
    |||||||||   ||||| |||||||||||||||||||||||    
T  877286 acgtgtacacctgatctaatggttgtgaagtgtttatgcac 877246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 101 - 214
Target Start/End: Complemental strand, 29157341 - 29157228
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatg 200  Q
    |||||||| |||||||||||||| |||| ||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||| ||| ||    
T  29157341 ttgatttggtgtagtttgagaagcctagtattattacacgtgtacactagatctgatggttgtaaagtgtttatgcacggtgcataaggatttccttgtg 29157242  T
Q  201 caccataacttttg 214  Q
    ||  ||||||||||    
T  29157241 catgataacttttg 29157228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 34399740 - 34399643
Alignment:
Q  117 tgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||  ||| ||||||||||||| ||||||||||||||||||||    
T  34399740 tgagaagcctaggattattacacgtgtacactagatctgatgattgtgaagtgtttatatacggtgcataaggatttccttatgcaccataacttttg 34399643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 118 - 214
Target Start/End: Original strand, 15034942 - 15035038
Alignment:
Q  118 gagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    |||||| ||| ||||||||||| |||||| |||||||||||||||||||   |||||||||| ||||||||||||| ||||||||||||||||||||    
T  15034942 gagaagcctatgattattacacatgtacactagatctgatggttgtgaatgatttatgcacggtgcataaggatttccttatgcaccataacttttg 15035038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 101 - 219
Target Start/End: Complemental strand, 18611304 - 18611185
Alignment:
Q  101 ttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcat-aaggattttcttat 199  Q
    |||||||| ||| |||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||   ||||| ||| | | ||||||    
T  18611304 ttgatttggtgtggtttgagaagcctatgattattacacgtgtacactagatctgatggttgtgaagtgtttatgcagagtgcataaagaaatgtcttat 18611205  T
Q  200 gcaccataacttttgtcaag 219  Q
    |||  |||||||||||||||    
T  18611204 gcataataacttttgtcaag 18611185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 35119310 - 35119241
Alignment:
Q  141 tgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||    ||||||||||||||||||||    
T  35119310 tgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagga----cttatgcaccataacttttg 35119241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 12394387 - 12394442
Alignment:
Q  158 ggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataactttt 213  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  12394387 ggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataactttt 12394442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 1449608 - 1449544
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  1449608 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 1449544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 1536896 - 1536960
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  1536896 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 1536960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 31216728 - 31216664
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  31216728 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 31216664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 1449675 - 1449714
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  1449675 tttatgcacggtgcataaggattttcttatgcaccataac 1449714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 6900869 - 6900807
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttt 212  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||    
T  6900869 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 6900807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 30908713 - 30908655
Alignment:
Q  156 atggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataactttt 213  Q
    |||||||||||||||||||||||| ||||||||| | |  |||||||||||||||||||    
T  30908713 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataactttt 30908655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 7089148 - 7089084
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    |||||||| |||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  7089148 atctgatgattgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 7089084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 214
Target Start/End: Complemental strand, 28116918 - 28116830
Alignment:
Q  126 taggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||||||| |||| || | ||||||||||||||||||   ||||||| | ||||||||   |  ||||||||||||||||||||    
T  28116918 taggattattacaagtgtccaattgatctgatggttgtgaagatcttatgcatggtgcataagttatggcttatgcaccataacttttg 28116830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 6900936 - 6900975
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  6900936 tttatgcacggtgcataaggatttccttatgcaccataac 6900975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 7765407 - 7765446
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  7765407 tttatgcacggtgcataaggatttccttatgcaccataac 7765446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 15493307 - 15493346
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  15493307 tttatgcacggtgcataaggatttccttatgcaccataac 15493346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 22857680 - 22857719
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  22857680 tttatgcagggtgcataaggattttcttatgcaccataac 22857719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 34869996 - 34869957
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  34869996 tttatgcacggtgcataaggatttccttatgcaccataac 34869957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 34870086 - 34870150
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| |||||||| || | ||||||||| | |  ||||||||||||||||||||    
T  34870086 atctgatggttgtgatgtgtttatacatggtgcataaggaaatggcttatgcaccataacttttg 34870150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 67 - 214
Target Start/End: Original strand, 25148 - 25295
Alignment:
Q  67 ttttagtgagagaaatatttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtacattagatctgatggttgtgaa 166  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||  ||| |||||| ||||||||||| || ||||||||||||||||    
T  25148 ttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaaacctaagattatgacacgtgtacactaaatctgatggttgtgaa 25247  T
Q  167 gtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  25248 gtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 25295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 125 - 214
Target Start/End: Original strand, 10649 - 10738
Alignment:
Q  125 ctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    ||||||||||||||  || ||| |||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||    
T  10649 ctaggattattacatatgcacactagatctgatggttgtgaagtgtttatgcacggtgtataaggatttccttatgcaccataacttttg 10738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 125 - 213
Target Start/End: Complemental strand, 7108 - 7020
Alignment:
Q  125 ctaggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataactttt 213  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| || |||| |||||  ||||||||||||||||||    
T  7108 ctaggattattacatgtgtacactagatctgatggttgtgaagtgtttatgcacggtgtataaagatttcgttatgcaccataactttt 7020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 11193 - 11253
Alignment:
Q  154 tgatggttgtgaagtgtttatgcacgatgcataaggattttcttatgcaccataacttttg 214  Q
    |||||||||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||    
T  11193 tgatggttgtgaagtgcttatgcacagtgcataaggatttccttatgcaccataacttttg 11253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 676 - 740
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  676 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 586 - 547
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  586 tttatgcacggtgcataaggatttccttatgcaccataac 547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 33750 - 33686
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||||||||||||||||    
T  33750 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 33686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 21017 - 20979
Alignment:
Q  171 ttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  21017 ttatgcacggtgcataaggattttcttatgcaccataac 20979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 8421 - 8485
Alignment:
Q  151 atctgatggttgtgaagtgtttatgcacgatgcataagg-attttcttatgcaccataacttttg 214  Q
    ||||||||||||||| ||||||||||||  ||||||||| | |  ||||||||||||||||||||    
T  8421 atctgatggttgtgatgtgtttatgcacagtgcataaggaaatggcttatgcaccataacttttg 8485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 96040 - 96000
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataact 210  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  96040 tttatgcagggtgcataaggattttcttatgcaccataact 96000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 24407 - 24446
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataac 209  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  24407 tttatgcacggtgcataaggatttccttatgcaccataac 24446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 6516 - 6556
Alignment:
Q  170 tttatgcacgatgcataaggattttcttatgcaccataact 210  Q
    |||||||| | ||||||||||||| ||||||||||||||||    
T  6516 tttatgcatggtgcataaggatttccttatgcaccataact 6556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 209
Target Start/End: Original strand, 80881 - 80909
Alignment:
Q  181 tgcataaggattttcttatgcaccataac 209  Q
    |||||||||||||||||||||||||||||    
T  80881 tgcataaggattttcttatgcaccataac 80909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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