View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10451_high_2 (Length: 627)
Name: NF10451_high_2
Description: NF10451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10451_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 486; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 486; E-Value: 0
Query Start/End: Original strand, 14 - 610
Target Start/End: Original strand, 43033641 - 43034229
Alignment:
| Q |
14 |
cagagagcaacaatgaatccactatgagcataaacaaaccagtacaataaagtttacatggtcccttgctttccattgttgagaaacagcccaacaaaaa |
113 |
Q |
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| T |
43033641 |
cagagagcaacaatgaatccactatgagcataaacaaaccagtacaataaagtttacatggtcccttgctttccattgttgagaaacagcccaacaaaaa |
43033740 |
T |
|
| Q |
114 |
tctctaaatctctttcgacc-tctattttcactcttcctttgatttctcagtctctctaatattcttttgtcatgtagagagtttacatgaattcctcac |
212 |
Q |
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| T |
43033741 |
tctctaaatccctttcgaccctctattttcactcttcctttgatttctcagtctctctaatattcttttgtcatgtagagagtttacatgaattcctcac |
43033840 |
T |
|
| Q |
213 |
ttcacacctcaaagtgtttcctaagattactccaagattattctccaa-gtctacccacagagatgccctatgattcttacatggacgcgtggatacaag |
311 |
Q |
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| T |
43033841 |
ttcacacctcaaagtgtttcctaagattactccaagattattctccaaagtctacccacagagatgccctatgattcttacatggacgcatgaatacaag |
43033940 |
T |
|
| Q |
312 |
cagccgctcataacataattagtggcaccaactatggttagtaactatgtaacaaagttgtaaccgaattaataccctcttcagatgttgcagcacctgg |
411 |
Q |
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| T |
43033941 |
cagccgctcataacataattagtggcaccaactatggttagtaactatgtaacaaagttgtaactgaattaataccctcttcagatgtt----------g |
43034030 |
T |
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| Q |
412 |
cagcacttatgcttgtacaagtttgtgagacacttcaacattcttgagaagtgtgaaaacgaacttaaccatgaaaatttacatacagttgttttgaaac |
511 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |
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| T |
43034031 |
cagcacttacgcttgtacaagtttgtgagacacttcaacattcttgagaagtgtgaaaatgaactaaaccatgaaaatttacatacagttgttttgaaac |
43034130 |
T |
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| Q |
512 |
tattccatggattcagtggaagcaacataaaaagtcacagtctaaacatttgaaataggaaagnnnnnnnnnngacaatgaaatcatcaacatgatttg |
610 |
Q |
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| T |
43034131 |
tattccatggattcaatggaagcaacataaaaagtcacagtctaaacatttgaaataggaaagaaaaaaaaaagacaatgaaatcatcaacatgatttg |
43034229 |
T |
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