View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10451_high_5 (Length: 428)
Name: NF10451_high_5
Description: NF10451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10451_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 386; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 19 - 412
Target Start/End: Complemental strand, 45715559 - 45715166
Alignment:
| Q |
19 |
tccattacctgaagaaatggaaaaccttgaattgttgacaaagcttgatctttcttataaccctttaaggtgttctattccaaagtttattgggaagttg |
118 |
Q |
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| T |
45715559 |
tccattacctgaagaaatggaaaaccttgaattgttgacaaagctcgatctttcttataaccctttaaggtgttctattccaaagtttattgggaagttg |
45715460 |
T |
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| Q |
119 |
aaaaatttggaaattttgaaccttgttttttctgagcttaatgggtcagttccatccgagcttggaaattgttcaaatttgactaatgtgatgctttcct |
218 |
Q |
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| T |
45715459 |
aaaaatttggaaattttgaaccttgttttttctgagcttaatgggtcagttccatccgagcttggaaattgttcaaatttgactaatgtgatgctttctt |
45715360 |
T |
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| Q |
219 |
ttaattcattatctgggtcattgcctcaagagctttctatgcttcctattaagacattttcagctgaaaagaatcttcttcatggtcctttgccttcttg |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45715359 |
ttaattcattatctgggtcattgcctcaagagctttctatgcttcctattaagacattttcagctgaaaagaatcttcttcatggtcctttgccttcttg |
45715260 |
T |
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| Q |
319 |
gcttgggaagtggagtaatattgattctcttttgctttcggcaaaccggttttcaggtgtgattccacctgagcttgggaattgttctgtgatg |
412 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45715259 |
gcttgggaagtggagtaatattgattctcttttgctttcggcaaaccggttttcaggtgtgattccacctgagcttgggaattgttctgtgatg |
45715166 |
T |
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