View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10451_low_26 (Length: 247)
Name: NF10451_low_26
Description: NF10451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10451_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 26792618 - 26792387
Alignment:
| Q |
3 |
attatagagtttgattatctnnnnnnngcttaatctaaagagaaacaactaacacccattagaaaagtaacagaaaataacgaactatatgctgctatac |
102 |
Q |
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| T |
26792618 |
attatagagtttgattatctaaaaaaagcttaatctaaagagaaacaactaacacccattagaaaagtaacagaaaataacaaactatatgctgctatac |
26792519 |
T |
|
| Q |
103 |
aaaataaaagagaatcaaaatagctaaggtcttttgagtctttcttcgtcataaacattggaccaattcttgaagattgttcaagcttttcctatattgt |
202 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26792518 |
aaaataaaagagaatcaaaatagctaaggtc-tttgagtctttcttcgtcataaacattggaccaattcttgaagattgttcaagcttttcctatattgt |
26792420 |
T |
|
| Q |
203 |
ataattctgcttaattgtctcaatgtcaagtcc |
235 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
26792419 |
ataattctgcttaattgtctcaatgtcaagtcc |
26792387 |
T |
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