View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10454_low_1 (Length: 816)

Name: NF10454_low_1
Description: NF10454
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10454_low_1
NF10454_low_1
[»] chr4 (15 HSPs)
chr4 (17-795)||(1747013-1747791)
chr4 (516-601)||(35723373-35723457)
chr4 (551-595)||(40613443-40613487)
chr4 (551-590)||(8423740-8423779)
chr4 (551-609)||(20743300-20743358)
chr4 (551-601)||(36635311-36635361)
chr4 (510-570)||(44132627-44132685)
chr4 (551-595)||(7012059-7012103)
chr4 (517-595)||(22234880-22234957)
chr4 (551-595)||(23293008-23293052)
chr4 (518-589)||(38148716-38148785)
chr4 (551-601)||(903909-903959)
chr4 (551-589)||(22440622-22440660)
chr4 (553-590)||(23861455-23861492)
chr4 (546-587)||(30522932-30522973)
[»] chr7 (25 HSPs)
chr7 (518-601)||(32308107-32308188)
chr7 (517-595)||(19206043-19206119)
chr7 (510-601)||(6630895-6630984)
chr7 (551-595)||(29787391-29787435)
chr7 (517-594)||(30731031-30731104)
chr7 (552-601)||(11722121-11722170)
chr7 (524-591)||(5548673-5548738)
chr7 (527-601)||(20549778-20549850)
chr7 (531-601)||(22868029-22868097)
chr7 (551-593)||(23191891-23191933)
chr7 (551-601)||(26733291-26733341)
chr7 (551-601)||(27945028-27945078)
chr7 (524-600)||(22602707-22602781)
chr7 (511-595)||(24339635-24339717)
chr7 (554-595)||(28155563-28155604)
chr7 (551-595)||(24289813-24289857)
chr7 (551-595)||(25481895-25481939)
chr7 (555-601)||(10042924-10042970)
chr7 (524-601)||(21828402-21828477)
chr7 (551-601)||(22484012-22484062)
chr7 (551-589)||(32287485-32287523)
chr7 (556-601)||(25791640-25791685)
chr7 (517-601)||(26329372-26329454)
chr7 (512-580)||(35297657-35297723)
chr7 (553-602)||(35861950-35861999)
[»] chr6 (31 HSPs)
chr6 (511-603)||(10339109-10339200)
chr6 (527-604)||(19040336-19040411)
chr6 (511-604)||(26562673-26562764)
chr6 (527-601)||(7265593-7265665)
chr6 (524-601)||(9027165-9027240)
chr6 (551-601)||(9658866-9658916)
chr6 (510-601)||(16766684-16766773)
chr6 (517-595)||(5000616-5000692)
chr6 (552-606)||(7801179-7801233)
chr6 (553-595)||(9629376-9629418)
chr6 (557-595)||(20371138-20371176)
chr6 (524-588)||(9025491-9025553)
chr6 (551-600)||(17341686-17341735)
chr6 (510-601)||(9107353-9107442)
chr6 (555-595)||(10842525-10842565)
chr6 (558-601)||(5732539-5732582)
chr6 (517-595)||(8931592-8931668)
chr6 (553-595)||(7377972-7378014)
chr6 (551-601)||(7996400-7996450)
chr6 (551-601)||(8022351-8022401)
chr6 (551-601)||(12696311-12696361)
chr6 (551-601)||(13851723-13851773)
chr6 (555-601)||(17841615-17841661)
chr6 (551-601)||(19044451-19044501)
chr6 (553-587)||(30866168-30866202)
chr6 (552-593)||(6665208-6665249)
chr6 (511-591)||(10294104-10294182)
chr6 (551-604)||(13360394-13360447)
chr6 (551-604)||(31959143-31959196)
chr6 (551-588)||(32511688-32511725)
chr6 (517-601)||(34073337-34073419)
[»] chr8 (19 HSPs)
chr8 (517-595)||(24362192-24362268)
chr8 (517-593)||(11927076-11927150)
chr8 (551-595)||(34897078-34897122)
chr8 (555-595)||(39954305-39954345)
chr8 (511-601)||(15816113-15816201)
chr8 (527-601)||(31109518-31109590)
chr8 (553-595)||(31236601-31236643)
chr8 (527-595)||(13844596-13844662)
chr8 (551-588)||(18067956-18067993)
chr8 (553-601)||(13436988-13437036)
chr8 (553-601)||(22651963-22652011)
chr8 (555-595)||(27101508-27101548)
chr8 (551-619)||(30271313-30271381)
chr8 (551-590)||(4611532-4611571)
chr8 (527-601)||(4786338-4786410)
chr8 (517-595)||(11944658-11944734)
chr8 (551-593)||(7658458-7658500)
chr8 (553-595)||(27213540-27213582)
chr8 (551-601)||(29510326-29510376)
[»] chr1 (39 HSPs)
chr1 (511-593)||(25361881-25361961)
chr1 (551-601)||(2896143-2896193)
chr1 (551-601)||(36878448-36878498)
chr1 (516-588)||(34371714-34371783)
chr1 (524-595)||(9828037-9828106)
chr1 (551-595)||(10474999-10475043)
chr1 (517-603)||(10572579-10572663)
chr1 (551-601)||(398787-398837)
chr1 (551-601)||(17831553-17831603)
chr1 (553-601)||(6427337-6427385)
chr1 (524-595)||(7918208-7918277)
chr1 (551-595)||(12443482-12443526)
chr1 (553-604)||(1262868-1262919)
chr1 (551-601)||(5376522-5376572)
chr1 (547-601)||(6415019-6415073)
chr1 (518-595)||(17754304-17754379)
chr1 (511-584)||(44482234-44482305)
chr1 (553-602)||(609482-609531)
chr1 (551-604)||(19562643-19562696)
chr1 (551-595)||(113292-113336)
chr1 (551-587)||(10233254-10233290)
chr1 (551-591)||(25098577-25098617)
chr1 (551-595)||(34298429-34298473)
chr1 (554-601)||(9709807-9709854)
chr1 (551-590)||(26238134-26238173)
chr1 (551-602)||(27471588-27471639)
chr1 (553-604)||(38078685-38078736)
chr1 (527-593)||(39953146-39953210)
chr1 (551-593)||(5898288-5898330)
chr1 (547-601)||(9103627-9103681)
chr1 (551-589)||(20157372-20157410)
chr1 (551-601)||(38503307-38503357)
chr1 (551-601)||(40285676-40285726)
chr1 (555-593)||(41877496-41877534)
chr1 (560-601)||(9690303-9690344)
chr1 (527-595)||(29163381-29163447)
chr1 (551-592)||(31015039-31015080)
chr1 (552-601)||(36905984-36906033)
chr1 (551-588)||(40181871-40181908)
[»] chr5 (25 HSPs)
chr5 (510-610)||(3966481-3966579)
chr5 (553-619)||(30098295-30098361)
chr5 (553-629)||(19737506-19737582)
chr5 (551-595)||(28588696-28588740)
chr5 (551-594)||(27932229-27932272)
chr5 (511-601)||(39698528-39698616)
chr5 (555-601)||(27144450-27144496)
chr5 (556-601)||(17123035-17123080)
chr5 (553-601)||(31084310-31084358)
chr5 (554-601)||(2436909-2436956)
chr5 (483-601)||(6035470-6035585)
chr5 (551-601)||(6247609-6247659)
chr5 (551-601)||(6326319-6326369)
chr5 (555-601)||(14674256-14674302)
chr5 (555-593)||(19579696-19579734)
chr5 (551-601)||(21191078-21191128)
chr5 (551-588)||(6471911-6471948)
chr5 (553-594)||(9449463-9449504)
chr5 (551-604)||(21576767-21576820)
chr5 (554-591)||(26716141-26716178)
chr5 (554-591)||(26985881-26985918)
chr5 (527-587)||(30502388-30502446)
chr5 (527-587)||(30542731-30542789)
chr5 (514-590)||(32766930-32767004)
chr5 (523-587)||(36838544-36838606)
[»] chr2 (17 HSPs)
chr2 (551-595)||(21616755-21616799)
chr2 (551-602)||(21782840-21782891)
chr2 (518-588)||(44860320-44860388)
chr2 (556-601)||(31284035-31284080)
chr2 (551-591)||(37411266-37411306)
chr2 (511-589)||(18889575-18889651)
chr2 (551-601)||(23718013-23718063)
chr2 (551-601)||(24105685-24105735)
chr2 (551-593)||(28677904-28677946)
chr2 (551-619)||(24894357-24894426)
chr2 (529-601)||(31808064-31808134)
chr2 (551-591)||(18276518-18276558)
chr2 (551-593)||(10535781-10535823)
chr2 (553-595)||(18420458-18420500)
chr2 (551-601)||(21374721-21374771)
chr2 (551-601)||(30404872-30404922)
chr2 (517-591)||(36409619-36409689)
[»] scaffold0004 (1 HSPs)
scaffold0004 (551-601)||(92794-92844)
[»] chr3 (26 HSPs)
chr3 (551-603)||(4987313-4987365)
chr3 (516-595)||(8039824-8039901)
chr3 (551-595)||(8383250-8383294)
chr3 (526-601)||(26290358-26290431)
chr3 (547-622)||(8412963-8413038)
chr3 (553-595)||(5407271-5407313)
chr3 (551-600)||(10690284-10690333)
chr3 (551-604)||(10954936-10954989)
chr3 (527-595)||(49505154-49505220)
chr3 (553-601)||(5441055-5441103)
chr3 (527-590)||(7928448-7928509)
chr3 (551-595)||(12704000-12704044)
chr3 (551-595)||(34307802-34307846)
chr3 (553-601)||(40052319-40052367)
chr3 (546-601)||(2620070-2620125)
chr3 (554-601)||(9800027-9800074)
chr3 (524-590)||(11313797-11313861)
chr3 (551-594)||(14979175-14979218)
chr3 (511-595)||(25064902-25064982)
chr3 (551-601)||(1438791-1438841)
chr3 (551-601)||(21479105-21479155)
chr3 (551-601)||(21720751-21720801)
chr3 (511-595)||(14209106-14209188)
chr3 (554-591)||(24633763-24633800)
chr3 (517-601)||(28678290-28678372)
chr3 (551-604)||(32429402-32429455)
[»] scaffold0036 (1 HSPs)
scaffold0036 (517-591)||(9737-9809)
[»] scaffold1528 (1 HSPs)
scaffold1528 (518-595)||(1028-1103)
[»] scaffold0306 (1 HSPs)
scaffold0306 (551-601)||(13387-13437)
[»] scaffold0152 (1 HSPs)
scaffold0152 (551-601)||(21890-21940)
[»] scaffold0103 (1 HSPs)
scaffold0103 (551-601)||(51798-51848)
[»] scaffold0223 (1 HSPs)
scaffold0223 (519-595)||(20165-20239)
[»] scaffold0044 (1 HSPs)
scaffold0044 (551-595)||(53173-53217)
[»] scaffold0020 (1 HSPs)
scaffold0020 (524-595)||(135309-135378)
[»] scaffold0123 (1 HSPs)
scaffold0123 (518-588)||(44516-44584)
[»] scaffold0110 (1 HSPs)
scaffold0110 (553-604)||(28834-28885)
[»] scaffold0018 (1 HSPs)
scaffold0018 (554-601)||(192274-192321)
[»] scaffold0008 (1 HSPs)
scaffold0008 (517-587)||(263362-263430)
[»] scaffold0003 (1 HSPs)
scaffold0003 (511-601)||(241581-241669)
[»] scaffold0085 (1 HSPs)
scaffold0085 (553-595)||(26386-26428)
[»] scaffold0136 (1 HSPs)
scaffold0136 (511-591)||(3833-3911)
[»] scaffold0024 (1 HSPs)
scaffold0024 (510-586)||(68225-68299)


Alignment Details
Target: chr4 (Bit Score: 648; Significance: 0; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 648; E-Value: 0
Query Start/End: Original strand, 17 - 795
Target Start/End: Complemental strand, 1747791 - 1747013
Alignment:
Q  17 cagttatcagatgagtgctgggctaatgtcatcgaattcctcatcgacgatgacgacaacaactccttgaaggttctctccctcgtctcaaaacagttac 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  1747791 cagttatcagatgagtgctgggctaatgtcatcgaattcctcatcgacgatgacgacaacaactccttgaaggttctctccctcatctcaaagcagttac 1747692  T
Q  117 tctccctaaccaactgtcacaaattctctctttcaatctcaaaccaaaccctaccttacttcccacgtctcttccagcgtttccccaacatcgcctgcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  1747691 tctccctaaccaactgtcacaaattctctctttcaatctcaaaccaaaccctaccttacctcccacgtctcttccagcgtttccccaatatcgcctgcct 1747592  T
Q  217 taacctcacacgcttccgcggtaacctcaaccacctcaaccggcttctcctcctaatctccactttccgattgcacctcaaattgctcaacctatccaac 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1747591 taacctcacacgcttccgcggtaacctcaaccacctcaaccggcttctcctcctaatctccactttccgattgcacctcaaattgctcaacctatccaac 1747492  T
Q  317 caatccacttttcctgcaaagggattgcgagctttgtccaaagagattaagattacaatgtttacccctctcacttgttccaactttgaccactctctcc 416  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1747491 caatccacttttccagcaaagggattgcgagctttgtccaaagagattaagattacaatgtttacccctctcacttgttccaactttgaccactctctcc 1747392  T
Q  417 ataaaaacgacctagttgttagctacgactacgatgacttcccttccttgaagaggttgacctgcaacactccttagattaagcgtgtccccatgtgttc 516  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  1747391 ataaaaacgacctagttgttagccacgactacaatgacttccctcccttgaagaggttgacctacaacactccttagattaggcgtgtccccatgtgttc 1747292  T
Q  517 gacaccaacacgacactgacacataaaat--------gttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcggtgt 608  Q
    ||||||||||||||||||||||||| |||         |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1747291 gacaccaacacgacactgacacatataataacgtataattaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgctcggtgt 1747192  T
Q  609 ccttgcttcattgattgaaactagnnnnnnnctttgaaaatgccaacttagattttctgtatttgattattactctatgcaccataatttcctagtaatc 708  Q
    ||||||||||||||||||||||||       |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  1747191 ccttgcttcattgattgaaactagtttttttctttgaaaatgccaactta--------gtatttgattattactctatgcaccataatttcctagtaatc 1747100  T
Q  709 ttgtatgttaagatttttatataatgtgcaatataatgcaattagttatgtgttatacaaagttataaattacattgtttttctttg 795  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1747099 ttgtatggtaagatttttatataaggtgcaatataatgcaattagttatgtgttatacaaagttataaattacattgtttttctttg 1747013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 601
Target Start/End: Original strand, 35723373 - 35723457
Alignment:
Q  516 cgacaccaacacgacactgacacataaaatgttaaactgaattatgtg-attttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||| | |||||||||||||||| |||  || | ||||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  35723373 cgacaccgatacgacactgacacatataat--tacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgt 35723457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 40613487 - 40613443
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  40613487 actgaattatgtgattttctcaaaatattagcggtgtcggcgtgt 40613443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 551 - 590
Target Start/End: Original strand, 8423740 - 8423779
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcgg 590  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  8423740 actgaattatgtgattttctcaaattattagcggtgtcgg 8423779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 609
Target Start/End: Original strand, 20743300 - 20743358
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcggtgtc 609  Q
    |||||||||||| |||||||||| |||||| | |||||||||||| |||||||| ||||    
T  20743300 actgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgttcgatgtc 20743358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 36635361 - 36635311
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||| |||||    
T  36635361 actgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgt 36635311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 570
Target Start/End: Original strand, 44132627 - 44132685
Alignment:
Q  510 tgtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttct 570  Q
    ||||||||||||||||||||||| |||||||| ||  ||| ||||||||| ||||||||||    
T  44132627 tgtgttcgacaccaacacgacaccgacacatataa--ttatactgaattacgtgattttct 44132685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 7012103 - 7012059
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||    
T  7012103 actgaattatgtcattttctcaaattattatcggtgtcggcgtgt 7012059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 595
Target Start/End: Original strand, 22234880 - 22234957
Alignment:
Q  517 gacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttct-caatttattagcggtgtcggcgtgt 595  Q
    |||||| ||||||||| |||||||| |||  || |||||||||||||||||| | ||| || ||||||||||||||||||    
T  22234880 gacaccgacacgacaccgacacatagaat--tacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgt 22234957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 595
Target Start/End: Original strand, 23293008 - 23293052
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||||||||||||||| |||| |||||||| ||||||||||||    
T  23293008 actgaattatgtgattttttcaaattattagctgtgtcggcgtgt 23293052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 589
Target Start/End: Original strand, 38148716 - 38148785
Alignment:
Q  518 acaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcg 589  Q
    ||||||||||||||  ||||  ||||||  || |||||||||||||||||||||||  ||||||||||||||    
T  38148716 acaccaacacgacatcgacatttaaaat--tacactgaattatgtgattttctcaaactattagcggtgtcg 38148785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 903959 - 903909
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||||||||||||||| |||||| ||||| ||| |||| |||||    
T  903959 actgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgt 903909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 589
Target Start/End: Original strand, 22440622 - 22440660
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcg 589  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  22440622 actgaattatgtgattttctcaaattattaacggtgtcg 22440660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 590
Target Start/End: Original strand, 23861455 - 23861492
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcgg 590  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  23861455 tgaatcatgtgattttatcaatttattagcggtgtcgg 23861492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 546 - 587
Target Start/End: Original strand, 30522932 - 30522973
Alignment:
Q  546 gttaaactgaattatgtgattttctcaatttattagcggtgt 587  Q
    |||| ||||||||||||||||||||||| | |||||||||||    
T  30522932 gttacactgaattatgtgattttctcaaataattagcggtgt 30522973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 5e-21; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 518 - 601
Target Start/End: Complemental strand, 32308188 - 32308107
Alignment:
Q  518 acaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||| |||||||||||||||||| |||  || ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  32308188 acaccgacacgacactgacacatacaat--tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 32308107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 517 - 595
Target Start/End: Complemental strand, 19206119 - 19206043
Alignment:
Q  517 gacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||||||| ||||| |||||||| |||  |||  ||||||||||||||||||||| |||||||||||||||||||||    
T  19206119 gacaccaacaagacaccgacacatataattataa--tgaattatgtgattttctcaaattattagcggtgtcggcgtgt 19206043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 510 - 601
Target Start/End: Original strand, 6630895 - 6630984
Alignment:
Q  510 tgtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||| ||||||||||||||||  |||||||| |||  || ||||||||| |||| |||||||| ||||||| ||||||||||||| |||||    
T  6630895 tgtgtccgacaccaacacgacatcgacacatataat--tacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgt 6630984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 551 - 595
Target Start/End: Original strand, 29787391 - 29787435
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  29787391 actgaattatgtgattttctcaaattattagcggtgtcggcgtgt 29787435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 517 - 594
Target Start/End: Complemental strand, 30731104 - 30731031
Alignment:
Q  517 gacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtg 594  Q
    |||||||||||||||| |||||| ||    ||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  30731104 gacaccaacacgacaccgacacacaa----ttacactgaattatgtgattttctcaaattattcgcggtgtcggcgtg 30731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 552 - 601
Target Start/End: Original strand, 11722121 - 11722170
Alignment:
Q  552 ctgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgt 11722170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 524 - 591
Target Start/End: Complemental strand, 5548738 - 5548673
Alignment:
Q  524 acacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggc 591  Q
    |||||||||||||||||| |||  || |||||||||| |||||||||||| |||| ||||||||||||    
T  5548738 acacgacactgacacatataat--tacactgaattatttgattttctcaaattatcagcggtgtcggc 5548673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 20549850 - 20549778
Alignment:
Q  527 cgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||| |||||||| |||  || ||||||||| ||||||||||||| |||||||||||||||| |||| |||||    
T  20549850 cgacaccgacacatataat--tacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgt 20549778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 531 - 601
Target Start/End: Complemental strand, 22868097 - 22868029
Alignment:
Q  531 actgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||| |||  || ||||||||||||||||||||||  ||||||| ||||||||||||| |||||    
T  22868097 actgacacatataat--tacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgt 22868029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 593
Target Start/End: Complemental strand, 23191933 - 23191891
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgt 593  Q
    |||||| |||||||||||||||| |||||||||||||||||||    
T  23191933 actgaaatatgtgattttctcaaattattagcggtgtcggcgt 23191891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 26733341 - 26733291
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||||| |||| ||||||||||||||| ||||| |||||    
T  26733341 actgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgt 26733291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 27945078 - 27945028
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||| |||||    
T  27945078 actgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgt 27945028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 600
Target Start/End: Original strand, 22602707 - 22602781
Alignment:
Q  524 acacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtg 600  Q
    ||||||||| |||||||| |||  || ||||||||||||||||||||||| | |||  |||||||||||||| ||||    
T  22602707 acacgacaccgacacatataat--tacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtg 22602781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 595
Target Start/End: Complemental strand, 24339717 - 24339635
Alignment:
Q  511 gtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||| ||||||| ||||||||| ||||| |  |||  || |||||||||||||||||| |||| |||||||| ||||||||||||    
T  24339717 gtgtccgacaccgacacgacaccgacacttgtaat--tacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 24339635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 595
Target Start/End: Complemental strand, 28155604 - 28155563
Alignment:
Q  554 gaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||| |||||||||| |||||||||||||||||||||    
T  28155604 gaattatgtaattttctcaaattattagcggtgtcggcgtgt 28155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 24289857 - 24289813
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||||||||| |||||||||| ||||| |||||||||||||||    
T  24289857 actgaattatgtaattttctcaaattattggcggtgtcggcgtgt 24289813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 25481939 - 25481895
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||||||||||||||| |||| |||||||| ||||||||||||    
T  25481939 actgaattatgtgattttttcaaattattagctgtgtcggcgtgt 25481895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 601
Target Start/End: Complemental strand, 10042970 - 10042924
Alignment:
Q  555 aattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||| ||| |||| ||||||| |||||||||||||||||||    
T  10042970 aattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgt 10042924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 601
Target Start/End: Original strand, 21828402 - 21828477
Alignment:
Q  524 acacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||| ||||||||||||| |||  || | || |||||||||||||||||| ||| || |||||||||||||| |||||    
T  21828402 acacaacactgacacatacaat--tacaatggattatgtgattttctcaaattactaacggtgtcggcgtgtcagtgt 21828477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 22484062 - 22484012
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||  ||||||| || ||||||||||||||||||||| |||||    
T  22484062 actgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgt 22484012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 589
Target Start/End: Original strand, 32287485 - 32287523
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcg 589  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  32287485 actgaattatgtgattttctcagattattagcggtgtcg 32287523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 601
Target Start/End: Complemental strand, 25791685 - 25791640
Alignment:
Q  556 attatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||| |||||||| | ||||||||||||||||||| |||||    
T  25791685 attatgtgaatttctcaaataattagcggtgtcggcgtgtcagtgt 25791640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 601
Target Start/End: Original strand, 26329372 - 26329454
Alignment:
Q  517 gacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||| ||||||| | |||||||| |||  || |||||||| |||| ||||||||| |||||| || ||||||||||| |||||    
T  26329372 gacaccgacacgacgccgacacatataat--tacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgt 26329454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 580
Target Start/End: Original strand, 35297657 - 35297723
Alignment:
Q  512 tgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttatta 580  Q
    ||||||||| |||||||||||  ||||||| |||  |||  ||||||||||||||||||||| ||||||    
T  35297657 tgttcgacatcaacacgacaccaacacatataattataa--tgaattatgtgattttctcaaattatta 35297723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 602
Target Start/End: Complemental strand, 35861999 - 35861950
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgtt 602  Q
    |||||||||||||||| |||| |||||||  |||||||||||| ||||||    
T  35861999 tgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgtt 35861950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 3e-16; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 511 - 603
Target Start/End: Original strand, 10339109 - 10339200
Alignment:
Q  511 gtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttc 603  Q
    |||| ||||||| ||||| |||||||||||| ||| | | ||||||||||||||||||||||| ||| | ||||||||||||||| |||||||    
T  10339109 gtgtccgacaccgacacggcactgacacatataat-taacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttc 10339200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 527 - 604
Target Start/End: Complemental strand, 19040411 - 19040336
Alignment:
Q  527 cgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcg 604  Q
    |||||| |||||||| |||  || ||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  19040411 cgacacagacacatataat--tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtattcg 19040336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 511 - 604
Target Start/End: Complemental strand, 26562764 - 26562673
Alignment:
Q  511 gtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcg 604  Q
    |||||||||||| ||||||||  |||||||| |||  || ||||||||||||||||||||||| || ||||| ||||||||||||  |||||||    
T  26562764 gtgttcgacaccgacacgacatcgacacatataat--tacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcg 26562673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 601
Target Start/End: Original strand, 7265593 - 7265665
Alignment:
Q  527 cgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||| |||||||| |||  || ||||||||||||||||||||||| ||||||||||||| ||||||| |||||    
T  7265593 cgacaccgacacatataat--tacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgt 7265665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 524 - 601
Target Start/End: Complemental strand, 9027240 - 9027165
Alignment:
Q  524 acacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||| |||||||| |||  || || ||||||||||||| |||||| ||||||||||||||||||||| |||||    
T  9027240 acacgacaccgacacatataat--tacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgt 9027165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 9658916 - 9658866
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  9658916 actgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgt 9658866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 601
Target Start/End: Complemental strand, 16766773 - 16766684
Alignment:
Q  510 tgtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||| ||||||| ||||||||| ||||| |  |||  || |||||||||||||||||| |||| |||||||| |||||||||||| |||||    
T  16766773 tgtgtccgacaccgacacgacaccgacacttgtaat--tacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 16766684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 517 - 595
Target Start/End: Original strand, 5000616 - 5000692
Alignment:
Q  517 gacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||| ||| |||||||||| |||||||  || ||||||| ||||||||||||| | ||||||||||||||| |||||    
T  5000616 gacaccgacatgacactgacatataaaat--tatactgaatcatgtgattttctcgaattattagcggtgtcgacgtgt 5000692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 606
Target Start/End: Original strand, 7801179 - 7801233
Alignment:
Q  552 ctgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcggt 606  Q
    ||||||||||||||||| |||| |||||||  |||||||||||| ||||||||||    
T  7801179 ctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgttcggt 7801233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 595
Target Start/End: Complemental strand, 9629418 - 9629376
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||||||| ||||| |||||||||||||||    
T  9629418 tgaattatgtgattttctcaaattattggcggtgtcggcgtgt 9629376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 595
Target Start/End: Original strand, 20371138 - 20371176
Alignment:
Q  557 ttatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  20371138 ttatgtgattttctcaaattattagcggtgtcggcgtgt 20371176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 588
Target Start/End: Original strand, 9025491 - 9025553
Alignment:
Q  524 acacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtc 588  Q
    ||||||||| |||||||| |||  || ||||||||||||||||||||||| |||||||| |||||    
T  9025491 acacgacaccgacacatataat--tacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 600
Target Start/End: Original strand, 17341686 - 17341735
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtg 600  Q
    |||||||||||||||||| |||| |||||| |||||||||||||| ||||    
T  17341686 actgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtg 17341735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 510 - 601
Target Start/End: Original strand, 9107353 - 9107442
Alignment:
Q  510 tgtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||| ||||||| ||||||||| ||||| |  |||  || |||||||| ||||||||| |||| |||||||| |||||||||||| |||||    
T  9107353 tgtgtccgacaccgacacgacaccgacacttgtaat--tacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgt 9107442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 555 - 595
Target Start/End: Complemental strand, 10842565 - 10842525
Alignment:
Q  555 aattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  10842565 aattatgtgattttttcaaattattagcggtgtcggcgtgt 10842525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 601
Target Start/End: Original strand, 5732539 - 5732582
Alignment:
Q  558 tatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||| |||||| |||||||||||||| |||||    
T  5732539 tatgtgattttctcaaattattaacggtgtcggcgtgtcagtgt 5732582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 595
Target Start/End: Original strand, 8931592 - 8931668
Alignment:
Q  517 gacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||| ||||||||  |||||||| |||  || |||||||||||| |||||||||| || ||||| ||||||||||||    
T  8931592 gacaccgacacgacatcgacacatataat--tatactgaattatgttattttctcaaatttttagctgtgtcggcgtgt 8931668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 553 - 595
Target Start/End: Complemental strand, 7378014 - 7377972
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||||||| || ||||||||||||| ||||    
T  7378014 tgaattatgtgattttctcaaatttttagcggtgtcggggtgt 7377972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 7996400 - 7996450
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||| |||||||||||| |||||||| |||||||| ||| |||||    
T  7996400 actgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgt 7996450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 8022401 - 8022351
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||| |||||||||||| |||||||| |||||||| ||| |||||    
T  8022401 actgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgt 8022351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 12696361 - 12696311
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||| ||||| |||| |||||||| |||||||||||| |||||    
T  12696361 actgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgt 12696311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 13851773 - 13851723
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||| || |||||||||| ||||||||||||||| ||||| |||||    
T  13851773 actgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgt 13851723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 601
Target Start/End: Original strand, 17841615 - 17841661
Alignment:
Q  555 aattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||| |||| |||||||| |||||||||||| |||||    
T  17841615 aattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 17841661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 19044501 - 19044451
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||||||| ||||||| |||||||  |||||||||||| |||||    
T  19044501 actgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgt 19044451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 553 - 587
Target Start/End: Original strand, 30866168 - 30866202
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgt 587  Q
    ||||||||||||||||||||| |||||||||||||    
T  30866168 tgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 593
Target Start/End: Complemental strand, 6665249 - 6665208
Alignment:
Q  552 ctgaattatgtgattttctcaatttattagcggtgtcggcgt 593  Q
    |||||||||||||||| ||||| ||||||||||| |||||||    
T  6665249 ctgaattatgtgatttactcaaattattagcggtttcggcgt 6665208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 511 - 591
Target Start/End: Complemental strand, 10294182 - 10294104
Alignment:
Q  511 gtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggc 591  Q
    |||| ||||||||||||||||| |||||||| ||  ||| | |||| |||| |||| |||||| ||||||||||| |||||    
T  10294182 gtgtccgacaccaacacgacaccgacacatataa--ttacattgaaatatgcgattatctcaaattattagcggtatcggc 10294104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 604
Target Start/End: Original strand, 13360394 - 13360447
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcg 604  Q
    ||||||||||||||||||||||| ||| ||| ||||||| |||||  |||||||    
T  13360394 actgaattatgtgattttctcaaattactagtggtgtcgacgtgtctgtgttcg 13360447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 604
Target Start/End: Complemental strand, 31959196 - 31959143
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcg 604  Q
    |||| ||||||||||||| |||| |||||||| ||| |||||||| ||||||||    
T  31959196 actgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgttcg 31959143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 588
Target Start/End: Original strand, 32511688 - 32511725
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtc 588  Q
    |||||||||||||||||||| || ||||||||||||||    
T  32511688 actgaattatgtgattttcttaaattattagcggtgtc 32511725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 601
Target Start/End: Original strand, 34073337 - 34073419
Alignment:
Q  517 gacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||| ||||||||| ||| |||| |||  || ||||||||||| ||||||||||| ||||||||| ||| ||| ||| |||||    
T  34073337 gacaccgacacgacaccgacccatataat--tacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgt 34073419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 517 - 595
Target Start/End: Original strand, 24362192 - 24362268
Alignment:
Q  517 gacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||| |||||||| ||||||||| |||  || |||||||||||||||| |||||| |||||||||||||||||||||    
T  24362192 gacaccgacacgacattgacacatataat--tacactgaattatgtgattctctcaaattattagcggtgtcggcgtgt 24362268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 517 - 593
Target Start/End: Original strand, 11927076 - 11927150
Alignment:
Q  517 gacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgt 593  Q
    |||||||||||||||| |||||||| |||  || |||||||||||||||||| |||| |||||| | ||||||||||    
T  11927076 gacaccaacacgacaccgacacatataat--tacactgaattatgtgattttatcaaattattaacagtgtcggcgt 11927150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 34897122 - 34897078
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  34897122 actgaattatgtgattttctcaaattattagcggtgtcgacgtgt 34897078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 555 - 595
Target Start/End: Original strand, 39954305 - 39954345
Alignment:
Q  555 aattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  39954305 aattatgtgattttctcaaattattagcggtgtcggcgtgt 39954345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 511 - 601
Target Start/End: Original strand, 15816113 - 15816201
Alignment:
Q  511 gtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||| ||||||||||||||||| ||||| || |||  || ||| |||||||||||||| |||| |||||||  |||||||||||| |||||    
T  15816113 gtgtccgacaccaacacgacaccgacacttataat--tacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 15816201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 527 - 601
Target Start/End: Original strand, 31109518 - 31109590
Alignment:
Q  527 cgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||||||| |  |||| |||||||| | |||||||||||| |||||| |||||||||||||| |||||    
T  31109518 cgacactgacacatata--gttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgt 31109590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 595
Target Start/End: Original strand, 31236601 - 31236643
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  31236601 tgaattatgtgattttctcaaattattagcagtgtcggcgtgt 31236643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 595
Target Start/End: Original strand, 13844596 - 13844662
Alignment:
Q  527 cgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||| |||||||| |||  || ||| ||||||||||||||||||| |||||||| ||||||||||||    
T  13844596 cgacaccgacacatataat--tacactcaattatgtgattttctcaaattattagcagtgtcggcgtgt 13844662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 588
Target Start/End: Original strand, 18067956 - 18067993
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtc 588  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  18067956 actgaattatgtgattttctcaaattattagcggtgtc 18067993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 553 - 601
Target Start/End: Original strand, 13436988 - 13437036
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||| |||| |||||||| |||||||||||| |||||    
T  13436988 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 13437036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 553 - 601
Target Start/End: Complemental strand, 22652011 - 22651963
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||| |||| |||||||| |||||||||||| |||||    
T  22652011 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 22651963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 555 - 595
Target Start/End: Complemental strand, 27101548 - 27101508
Alignment:
Q  555 aattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  27101548 aattatgtgattttttcaaattattagcggtgtcggcgtgt 27101508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 619
Target Start/End: Original strand, 30271313 - 30271381
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcggtgtccttgcttcat 619  Q
    |||| ||||||||||||| |||| | |||||| |||||||||||| ||||| |||||||  ||||||||    
T  30271313 actgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccggtgtctgtgcttcat 30271381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 551 - 590
Target Start/End: Complemental strand, 4611571 - 4611532
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcgg 590  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  4611571 actgaattatgttattttctcaaattattagcggtgtcgg 4611532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 601
Target Start/End: Original strand, 4786338 - 4786410
Alignment:
Q  527 cgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||| |||||||| |||  || |||||||||||||||||||| || ||||||  ||||||||||||| |||||    
T  4786338 cgacaccgacacatataat--tacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgt 4786410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 595
Target Start/End: Complemental strand, 11944734 - 11944658
Alignment:
Q  517 gacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||| ||||||||||| |||||||| |||  || ||||| |||||||||||| |||| |||||| | ||||||||||||    
T  11944734 gacatcaacacgacaccgacacatataat--tacactgagttatgtgattttatcaaattattaacagtgtcggcgtgt 11944658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 593
Target Start/End: Complemental strand, 7658500 - 7658458
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgt 593  Q
    |||||||||||| |||||||||| ||||||| |||||||||||    
T  7658500 actgaattatgtaattttctcaaattattagtggtgtcggcgt 7658458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 553 - 595
Target Start/End: Complemental strand, 27213582 - 27213540
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||||||||||||||| || |||||||| ||||||||||||    
T  27213582 tgaattatgtgattttctgaaattattagcagtgtcggcgtgt 27213540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 29510326 - 29510376
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||| ||||||||| |||| |||||||| |||||||||||| |||||    
T  29510326 actgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 29510376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 511 - 593
Target Start/End: Complemental strand, 25361961 - 25361881
Alignment:
Q  511 gtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgt 593  Q
    |||| ||||||| |||||||||||||||||| |||  || ||||||||||||||||||||||| |||| || |||||||||||    
T  25361961 gtgtccgacaccgacacgacactgacacatataat--tacactgaattatgtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 2896143 - 2896193
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  2896143 actgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 2896193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 36878498 - 36878448
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  36878498 actgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 36878448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 588
Target Start/End: Complemental strand, 34371783 - 34371714
Alignment:
Q  516 cgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtc 588  Q
    ||||||||||||||||| |||||||| |||  || ||||||||||||||||||||||| ||||||||||||||    
T  34371783 cgacaccaacacgacaccgacacatataat--tacactgaattatgtgattttctcaa-ttattagcggtgtc 34371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 524 - 595
Target Start/End: Complemental strand, 9828106 - 9828037
Alignment:
Q  524 acacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||| ||||||||||||  || |||||||||||||||||| |||| ||||||| |||||||||||||    
T  9828106 acacgacaccgacacataaaat--tacactgaattatgtgattttatcaaattattagtggtgtcggcgtgt 9828037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 551 - 595
Target Start/End: Original strand, 10474999 - 10475043
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  10474999 actgaattatgtgattttctcaagttattagcggtgtcggcgtgt 10475043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 517 - 603
Target Start/End: Original strand, 10572579 - 10572663
Alignment:
Q  517 gacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttc 603  Q
    ||||||||||| |||| |||||||  |||  || || |||||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  10572579 gacaccaacacaacaccgacacatttaat--tacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttc 10572663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 398787 - 398837
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||||| |||| ||||||||||||||||||||| |||||    
T  398787 actgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgt 398837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 17831553 - 17831603
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||| |||||    
T  17831553 actgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 17831603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 601
Target Start/End: Complemental strand, 6427385 - 6427337
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| |||||    
T  6427385 tgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgt 6427337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 524 - 595
Target Start/End: Original strand, 7918208 - 7918277
Alignment:
Q  524 acacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||||||||||||||| |||  || ||||||||||||||||||||||| ||||||| | |||| ||||||    
T  7918208 acacgacactgacacatataat--tacactgaattatgtgattttctcaaattattagtgatgtcagcgtgt 7918277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 595
Target Start/End: Original strand, 12443482 - 12443526
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  12443482 actgaattatgtgattttctcaaattattagctgtgtcggcgtgt 12443526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 553 - 604
Target Start/End: Complemental strand, 1262919 - 1262868
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcg 604  Q
    ||||||||||||||||||||| |||||||| ||||||||||||  |||||||    
T  1262919 tgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcg 1262868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 5376522 - 5376572
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||| ||||||| || ||||||||||||||||||||| |||||    
T  5376522 actgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgt 5376572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 601
Target Start/End: Original strand, 6415019 - 6415073
Alignment:
Q  547 ttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||| |||||||||||||||||| | ||||||| ||||||||||| |||||    
T  6415019 ttaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgt 6415073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 595
Target Start/End: Complemental strand, 17754379 - 17754304
Alignment:
Q  518 acaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||| |||| ||||||||||||| |  |||| |||||||||||| ||||| |||| |||||||||||||||| ||||    
T  17754379 acaccgacaccacactgacacatata--gttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgt 17754304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 511 - 584
Target Start/End: Complemental strand, 44482305 - 44482234
Alignment:
Q  511 gtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcgg 584  Q
    |||| ||||||| ||||||||| |||||||| |||  || ||||||||||||||||||||||| |||| |||||    
T  44482305 gtgtccgacaccgacacgacaccgacacatataat--tacactgaattatgtgattttctcaaattataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 602
Target Start/End: Original strand, 609482 - 609531
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgtt 602  Q
    |||||||||| |||||||||| ||||||| ||||||||||||| ||||||    
T  609482 tgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtt 609531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 604
Target Start/End: Original strand, 19562643 - 19562696
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcg 604  Q
    |||||| |||| ||||||||||| |||||||| |||||||||||| ||||||||    
T  19562643 actgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgttcg 19562696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 113336 - 113292
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||||||||||||||| |||| |||||||| ||||||||||||    
T  113336 actgaattatgtgattttttcaaattattagctgtgtcggcgtgt 113292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 587
Target Start/End: Complemental strand, 10233290 - 10233254
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgt 587  Q
    ||||||||||||||||||||||||||||||| |||||    
T  10233290 actgaattatgtgattttctcaatttattagtggtgt 10233254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 591
Target Start/End: Original strand, 25098577 - 25098617
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggc 591  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  25098577 actgaattatgtgattttctcaaattatcagcggtgtcggc 25098617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 34298473 - 34298429
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||    
T  34298473 actgaattatgtgattttctcaaattattagtggtgtcggtgtgt 34298429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 601
Target Start/End: Complemental strand, 9709854 - 9709807
Alignment:
Q  554 gaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||||||| ||||||||||||| ||| ||| |||||    
T  9709854 gaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgt 9709807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 551 - 590
Target Start/End: Original strand, 26238134 - 26238173
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcgg 590  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  26238134 actgaattatgttattttctcaaattattagcggtgtcgg 26238173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 551 - 602
Target Start/End: Original strand, 27471588 - 27471639
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgtt 602  Q
    ||||||||||||| ||||||||| ||||||||||| |||| |||| ||||||    
T  27471588 actgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgtt 27471639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 604
Target Start/End: Original strand, 38078685 - 38078736
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcg 604  Q
    |||||||||||||||| |||| |||||||| |||||| ||||| ||||||||    
T  38078685 tgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcg 38078736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 593
Target Start/End: Original strand, 39953146 - 39953210
Alignment:
Q  527 cgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgt 593  Q
    |||||| |||||||| |||  || ||| |||||||||||||||| || |||||||||||||||||||    
T  39953146 cgacaccgacacatacaat--tacactaaattatgtgattttctaaaattattagcggtgtcggcgt 39953210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 593
Target Start/End: Original strand, 5898288 - 5898330
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgt 593  Q
    |||||||||||||||||| |||  |||||||||||||||||||    
T  5898288 actgaattatgtgattttttcagattattagcggtgtcggcgt 5898330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 547 - 601
Target Start/End: Complemental strand, 9103681 - 9103627
Alignment:
Q  547 ttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||| |||||||||||||| |||| |||||| | |||||||||||| |||||    
T  9103681 ttaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgt 9103627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 589
Target Start/End: Original strand, 20157372 - 20157410
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcg 589  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  20157372 actgaattatgtgattttctcacattattagcggtgtcg 20157410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 38503357 - 38503307
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||| ||| |||||||||||| |||||||||||||||| |||| |||||    
T  38503357 actgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgt 38503307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 40285676 - 40285726
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||| ||||||||||| ||||||||||||| || |||| |||||    
T  40285676 actgaattatgcgattttctcaaattattagcggtgttggtgtgtcagtgt 40285726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 593
Target Start/End: Original strand, 41877496 - 41877534
Alignment:
Q  555 aattatgtgattttctcaatttattagcggtgtcggcgt 593  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  41877496 aattatgtaattttctcaaattattagcggtgtcggcgt 41877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 601
Target Start/End: Original strand, 9690303 - 9690344
Alignment:
Q  560 tgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||||| ||||||||||||||| |||||| |||||    
T  9690303 tgtgattttctcagtttattagcggtgtcagcgtgtcagtgt 9690344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 595
Target Start/End: Original strand, 29163381 - 29163447
Alignment:
Q  527 cgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||| |||||||| |||  |||| |||||||||||||||||  || || ||||||||||||||||||    
T  29163381 cgacaccgacacatataat--taaattgaattatgtgattttcctaaatttttagcggtgtcggcgtgt 29163447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 592
Target Start/End: Complemental strand, 31015080 - 31015039
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcg 592  Q
    ||||||||||||||||||||||| |||||||| |||| ||||    
T  31015080 actgaattatgtgattttctcaaattattagctgtgtaggcg 31015039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 601
Target Start/End: Complemental strand, 36906033 - 36905984
Alignment:
Q  552 ctgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||||||||  ||||||||||||| || |||| |||||    
T  36906033 ctgaattatgtgattttctcagattattagcggtgttggtgtgtcagtgt 36905984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 588
Target Start/End: Complemental strand, 40181908 - 40181871
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtc 588  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  40181908 actgaattatgtgattttctcaaattattagcagtgtc 40181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 510 - 610
Target Start/End: Complemental strand, 3966579 - 3966481
Alignment:
Q  510 tgtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcggtgtc 609  Q
    ||||| ||||||  ||||||||| |||||||| |||  || |||||||| |||||||||||||| ||||||||||||||||| ||| ||||| | |||||    
T  3966579 tgtgtccgacactgacacgacaccgacacatataat--tacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtccagtgtc 3966482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 553 - 619
Target Start/End: Complemental strand, 30098361 - 30098295
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcggtgtccttgcttcat 619  Q
    ||||||||||||||||||||| |||||| |||| ||| ||||| ||||| |||||||| ||||||||    
T  30098361 tgaattatgtgattttctcaaattattaacggtttcgtcgtgtcagtgtccggtgtccgtgcttcat 30098295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 629
Target Start/End: Original strand, 19737506 - 19737582
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcggtgtccttgcttcattgattgaaac 629  Q
    |||||||||| |||||||||| |||||| |||| || |||||| ||||| || |||||||||||||  |||||||||    
T  19737506 tgaattatgtaattttctcaaattattatcggtttcagcgtgtcagtgtccgttgtccttgcttcagagattgaaac 19737582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 595
Target Start/End: Original strand, 28588696 - 28588740
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||    
T  28588696 actgaattatgtgattttctcaaattattaccggtgtcggcgtgt 28588740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 551 - 594
Target Start/End: Complemental strand, 27932272 - 27932229
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtg 594  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  27932272 actgaattatgtaattttctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 511 - 601
Target Start/End: Complemental strand, 39698616 - 39698528
Alignment:
Q  511 gtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||| ||||||| ||||||||||||||| |  |||  || |||||||||||||||||| |||| |||||||| ||||| |||||| |||||    
T  39698616 gtgtccgacaccgacacgacactgacacttgtaat--tacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgt 39698528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 601
Target Start/End: Complemental strand, 27144496 - 27144450
Alignment:
Q  555 aattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  27144496 aattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgt 27144450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 601
Target Start/End: Complemental strand, 17123080 - 17123035
Alignment:
Q  556 attatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||||| ||||||||||||| ||||||| |||||    
T  17123080 attatgtgattttctcaaattattagcggtgttggcgtgtcagtgt 17123035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 553 - 601
Target Start/End: Complemental strand, 31084358 - 31084310
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||| |||| |||||||| |||||||||||| |||||    
T  31084358 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 31084310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 601
Target Start/End: Complemental strand, 2436956 - 2436909
Alignment:
Q  554 gaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||  ||| ||||||||||||||||||||| |||||    
T  2436956 gaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgt 2436909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 483 - 601
Target Start/End: Complemental strand, 6035585 - 6035470
Alignment:
Q  483 acactccttagattaagcgtgtccccatgtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagc 582  Q
    |||||||| |||||| |||||||||   ||||  | |||| ||||||||| |||| ||| |||  || |||||||||| | |||| ||||| ||||||||    
T  6035585 acactcctcagattaggcgtgtcccggcgtgtctgtcaccgacacgacaccgacaaatataat--tacactgaattatattattt-ctcaaattattagc 6035489  T
Q  583 ggtgtcggcgtgtaagtgt 601  Q
    ||||||||||||| |||||    
T  6035488 ggtgtcggcgtgtcagtgt 6035470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 6247659 - 6247609
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||||| |||| |||||||  |||||||||||| |||||    
T  6247659 actgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgt 6247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 6326319 - 6326369
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||| |||||||||| ||| ||||| ||||||||||| |||||    
T  6326319 actgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgt 6326369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 601
Target Start/End: Complemental strand, 14674302 - 14674256
Alignment:
Q  555 aattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||| |||| |||||||| |||||||||||| |||||    
T  14674302 aattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 14674256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 593
Target Start/End: Complemental strand, 19579734 - 19579696
Alignment:
Q  555 aattatgtgattttctcaatttattagcggtgtcggcgt 593  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  19579734 aattatgtgattttctcaaattattagctgtgtcggcgt 19579696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 21191078 - 21191128
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||||| |||| |||||||| |||||||| ||| |||||    
T  21191078 actgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgt 21191128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 588
Target Start/End: Original strand, 6471911 - 6471948
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtc 588  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  6471911 actgaattatgtgattttctcaaattattagccgtgtc 6471948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 594
Target Start/End: Complemental strand, 9449504 - 9449463
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtg 594  Q
    ||||||||||||||||||||| ||||||  ||||||||||||    
T  9449504 tgaattatgtgattttctcaaattattattggtgtcggcgtg 9449463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 604
Target Start/End: Original strand, 21576767 - 21576820
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcg 604  Q
    |||||||||||||||||| |||| |||||||| |||| ||||| | ||||||||    
T  21576767 actgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgttcg 21576820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 591
Target Start/End: Complemental strand, 26716178 - 26716141
Alignment:
Q  554 gaattatgtgattttctcaatttattagcggtgtcggc 591  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  26716178 gaattatgtgattttctcaaattattagcagtgtcggc 26716141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 591
Target Start/End: Complemental strand, 26985918 - 26985881
Alignment:
Q  554 gaattatgtgattttctcaatttattagcggtgtcggc 591  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  26985918 gaattatgtgattttctcaaattattagcagtgtcggc 26985881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 587
Target Start/End: Original strand, 30502388 - 30502446
Alignment:
Q  527 cgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgt 587  Q
    |||||| |||||||| |||  || ||||||||| ||||||||||||| |||||||||||||    
T  30502388 cgacaccgacacatataat--tacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 587
Target Start/End: Original strand, 30542731 - 30542789
Alignment:
Q  527 cgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgt 587  Q
    |||||| |||||||| |||  || ||||||||| ||||||||||||| |||||||||||||    
T  30542731 cgacaccgacacatataat--tacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 590
Target Start/End: Original strand, 32766930 - 32767004
Alignment:
Q  514 ttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcgg 590  Q
    ||||||||| |||||||||  ||||||| |||  || | |||||| || ||||||||||| ||||||||||||||||    
T  32766930 ttcgacaccgacacgacacaaacacatataat--tacattgaattgtgcgattttctcaaattattagcggtgtcgg 32767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 587
Target Start/End: Complemental strand, 36838606 - 36838544
Alignment:
Q  523 aacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgt 587  Q
    |||||||||| |||||||| |||  || ||| |||||||| |||||||||| |||||||||||||    
T  36838606 aacacgacaccgacacatataat--tacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 21616799 - 21616755
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  21616799 actgaattatgtgattttctcaaattattagcggtgtcggcgtgt 21616755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 551 - 602
Target Start/End: Original strand, 21782840 - 21782891
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgtt 602  Q
    ||||||||||||||||||||||| |||||||| |||||||||||| ||||||    
T  21782840 actgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtt 21782891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 518 - 588
Target Start/End: Complemental strand, 44860388 - 44860320
Alignment:
Q  518 acaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtc 588  Q
    ||||||||||||||| |||||||| |||  || ||||||||||| ||||||||||| ||||||||||||||    
T  44860388 acaccaacacgacaccgacacatataat--tacactgaattatgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 556 - 601
Target Start/End: Complemental strand, 31284080 - 31284035
Alignment:
Q  556 attatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||    
T  31284080 attatgtgattttctcaaattattagcagtgtcggcgtgtaagtgt 31284035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 591
Target Start/End: Original strand, 37411266 - 37411306
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggc 591  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  37411266 actgaattatgtgattttctcaaattattagcggtgtcggc 37411306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 511 - 589
Target Start/End: Original strand, 18889575 - 18889651
Alignment:
Q  511 gtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcg 589  Q
    |||| |||||| |||| ||||| ||||||||  ||  || |||||||||||||||||||||||||||||||||| ||||    
T  18889575 gtgtccgacacaaacaagacaccgacacatatgat--tacactgaattatgtgattttctcaatttattagcggcgtcg 18889651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 23718063 - 23718013
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||| |||||||| |||||||||||||||| |||| |||||    
T  23718063 actgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgt 23718013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 24105735 - 24105685
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||| |||||||| |||||||||||||||| |||| |||||    
T  24105735 actgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgt 24105685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 593
Target Start/End: Complemental strand, 28677946 - 28677904
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgt 593  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  28677946 actgaattatgtgattttttcaaattattagcggtgtcggcgt 28677904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 619
Target Start/End: Complemental strand, 24894426 - 24894357
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcg-gtgtccttgcttcat 619  Q
    |||||||||||||||||| | || |||||||| |||||||||||| ||||| || |||||| ||||||||    
T  24894426 actgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtgtgtccgtgcttcat 24894357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 601
Target Start/End: Complemental strand, 31808134 - 31808064
Alignment:
Q  529 acactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||||| |||  || |||||||||||||||||| | || |||||||||||||||| |||| |||||    
T  31808134 acactgacacatataat--tacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgt 31808064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 591
Target Start/End: Complemental strand, 18276558 - 18276518
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggc 591  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  18276558 actgaattaagtgattttctcaaattattagcggtgtcggc 18276518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 593
Target Start/End: Original strand, 10535781 - 10535823
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgt 593  Q
    |||||||||||| |||||||||| |||||| ||||||||||||    
T  10535781 actgaattatgtcattttctcaaattattatcggtgtcggcgt 10535823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 553 - 595
Target Start/End: Original strand, 18420458 - 18420500
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||||||| |||||||| |||| |||||||    
T  18420458 tgaattatgtgattttctcaaattattagcagtgttggcgtgt 18420500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 21374721 - 21374771
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||| ||||| |||| |||||||| |||||||||||| |||||    
T  21374721 actgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgt 21374771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 30404872 - 30404922
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||||| |||| |||||| | |||||||||||| |||||    
T  30404872 actgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgt 30404922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 591
Target Start/End: Original strand, 36409619 - 36409689
Alignment:
Q  517 gacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggc 591  Q
    |||||||||| ||||| |||||||||    ||| ||| |||||||||||||| |||| |||| ||||||||||||    
T  36409619 gacaccaacatgacaccgacacataa----ttacactaaattatgtgattttttcaaattatcagcggtgtcggc 36409689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 92844 - 92794
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  92844 actgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgt 92794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000002; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 603
Target Start/End: Original strand, 4987313 - 4987365
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttc 603  Q
    |||||||||||||||||| |||| |||||||| |||||||||||| |||||||    
T  4987313 actgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgttc 4987365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 595
Target Start/End: Original strand, 8039824 - 8039901
Alignment:
Q  516 cgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||| ||||||||| |||||||| |||  || |||||||||| | |||||||||| ||||||||||||| |||||||    
T  8039824 cgacaccgacacgacaccgacacatataat--tacactgaattatataattttctcaaattattagcggtgttggcgtgt 8039901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 8383294 - 8383250
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||||||| |||||||||||| |||||||||||||||||||||    
T  8383294 actgaattatatgattttctcaaattattagcggtgtcggcgtgt 8383250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 601
Target Start/End: Complemental strand, 26290431 - 26290358
Alignment:
Q  526 acgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||| |||  ||||| ||| |||||||||||||||| ||||||  ||||||||||||| |||||    
T  26290431 acgacactgacacatataat--taaaccgaactatgtgattttctcaaattattaatggtgtcggcgtgtcagtgt 26290358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 547 - 622
Target Start/End: Original strand, 8412963 - 8413038
Alignment:
Q  547 ttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcggtgtccttgcttcattga 622  Q
    ||||||||||||||||| ||||||||| |||||||  |||||||  ||| | ||| |||||||| |||||||||||    
T  8412963 ttaaactgaattatgtgtttttctcaaattattagttgtgtcggtctgtcaatgtccggtgtccgtgcttcattga 8413038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 595
Target Start/End: Original strand, 5407271 - 5407313
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  5407271 tgaattatgtgattttctcaaatttttagcggtgtcggcgtgt 5407313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 600
Target Start/End: Original strand, 10690284 - 10690333
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtg 600  Q
    ||||||||||||||||||||||  |||||||||||||| | |||||||||    
T  10690284 actgaattatgtgattttctcagattattagcggtgtccgagtgtaagtg 10690333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 604
Target Start/End: Complemental strand, 10954989 - 10954936
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcg 604  Q
    |||||||||||||||||| |||| |||||||  |||||||||||| ||||||||    
T  10954989 actgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcg 10954936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 595
Target Start/End: Original strand, 49505154 - 49505220
Alignment:
Q  527 cgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||| |||  || ||| ||||||||||||||||||| ||||||||||| || ||||||    
T  49505154 cgacactgacacatataat--tacactaaattatgtgattttctcaaattattagcggtctctgcgtgt 49505220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 553 - 601
Target Start/End: Original strand, 5441055 - 5441103
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||||||||||||| || ||||||||| |||||||| |||||    
T  5441055 tgaattatgtgattttctcaaatttttagcggtgacggcgtgtcagtgt 5441103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 527 - 590
Target Start/End: Complemental strand, 7928509 - 7928448
Alignment:
Q  527 cgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcgg 590  Q
    |||||| |||||||| |||  || |||||||||||||||||| |||| ||||||||||||||||    
T  7928509 cgacaccgacacatataat--tacactgaattatgtgattttttcaaattattagcggtgtcgg 7928448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 12704044 - 12704000
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||||    
T  12704044 actgaattatgtgcttttctcaaattattagtggtgtcggcgtgt 12704000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 595
Target Start/End: Original strand, 34307802 - 34307846
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||||| |||||||||||||||| |||||||||||||| ||||||    
T  34307802 actgaaatatgtgattttctcaaattattagcggtgtcagcgtgt 34307846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 553 - 601
Target Start/End: Complemental strand, 40052367 - 40052319
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||| |||| |||||||| |||||||||||| |||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 40052319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 601
Target Start/End: Original strand, 2620070 - 2620125
Alignment:
Q  546 gttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||| ||| ||||||||||||||||||| | ||||| ||||||||||||| |||||    
T  2620070 gttacacttaattatgtgattttctcaaatgattagtggtgtcggcgtgtcagtgt 2620125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 601
Target Start/End: Complemental strand, 9800074 - 9800027
Alignment:
Q  554 gaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||| |||||||||| ||||||| ||||||||||||| |||||    
T  9800074 gaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgt 9800027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 590
Target Start/End: Original strand, 11313797 - 11313861
Alignment:
Q  524 acacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcgg 590  Q
    |||||||||| ||||||| |||  || ||| ||||||||||||||||||| |||||||| |||||||    
T  11313797 acacgacactaacacatataat--tacactaaattatgtgattttctcaaattattagcagtgtcgg 11313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 551 - 594
Target Start/End: Complemental strand, 14979218 - 14979175
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtg 594  Q
    |||||||||||||||||| |||| |||||||| |||||||||||    
T  14979218 actgaattatgtgattttttcaaattattagctgtgtcggcgtg 14979175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 595
Target Start/End: Complemental strand, 25064982 - 25064902
Alignment:
Q  511 gtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||| |||||||||||||| ||  ||||||||    ||| ||| |||||||||||||| |||| | |||||||||||||||||||    
T  25064982 gtgtccgacaccaacacgataccaacacataa----ttacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgt 25064902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 1438841 - 1438791
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||||||||||||||| || |||||| |||||| |||| |||||    
T  1438841 actgaattatgtgattttctcaaattgttagcgatgtcggtgtgtcagtgt 1438791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 21479155 - 21479105
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||| ||||||||| |||| |||||||| |||||||||||| |||||    
T  21479155 actgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 21479105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 21720801 - 21720751
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||| ||| ||||||| |||||| |||||||||||||| |||||    
T  21720801 actgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgt 21720751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 511 - 595
Target Start/End: Complemental strand, 14209188 - 14209106
Alignment:
Q  511 gtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||| ||||||| ||||||||||||||| |  |||  || |||||||||||||||||| | || |||||||  ||||||||||||    
T  14209188 gtgtccgacaccgacacgacactgacacttgtaat--tacactgaattatgtgattttttaaaattattagttgtgtcggcgtgt 14209106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 591
Target Start/End: Complemental strand, 24633800 - 24633763
Alignment:
Q  554 gaattatgtgattttctcaatttattagcggtgtcggc 591  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  24633800 gaattatgtgattttctcaaattattagtggtgtcggc 24633763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 601
Target Start/End: Complemental strand, 28678372 - 28678290
Alignment:
Q  517 gacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||| |||||||| ||  ||| ||| |||||||||||||| | || |||||||| | |||||| ||| |||||    
T  28678372 gacaccaacacgacaccgacacatacaa--ttatactaaattatgtgattttattaaattattagcagcgtcggcatgtcagtgt 28678290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 604
Target Start/End: Original strand, 32429402 - 32429455
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcg 604  Q
    |||||||||||||||||||| || ||||||||| |||||| |||| | ||||||    
T  32429402 actgaattatgtgattttcttaaattattagcgttgtcggagtgtcaatgttcg 32429455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 517 - 591
Target Start/End: Original strand, 9737 - 9809
Alignment:
Q  517 gacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggc 591  Q
    |||||||||||||||| |||||||| |||  || ||||||||| ||||||||||||| ||||||| || ||||||    
T  9737 gacaccaacacgacaccgacacatataat--tacactgaattaagtgattttctcaaattattagtggcgtcggc 9809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 595
Target Start/End: Complemental strand, 1103 - 1028
Alignment:
Q  518 acaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||| |||| ||||||||||||| |  |||| |||||||||||| ||||| |||| |||||||||||||||| ||||    
T  1103 acaccgacaccacactgacacatata--gttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgt 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 13437 - 13387
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||||||||||||||| |||||||  |||||||||||| |||||    
T  13437 actgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgt 13387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 21890 - 21940
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||||||||||||||||| |||||||  |||||||||||| |||||    
T  21890 actgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgt 21940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 51848 - 51798
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||||||||||||||||| |||| |||||||| |||||||||||| |||||    
T  51848 actgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 51798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 595
Target Start/End: Complemental strand, 20239 - 20165
Alignment:
Q  519 caccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    |||| ||||||||||||||| |  |||  || |||||||||||||||||| |||| |||||||| ||||||||||||    
T  20239 caccgacacgacactgacacttgtaat--tacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 20165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 53217 - 53173
Alignment:
Q  551 actgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||    
T  53217 actgaattatgtgattttctcaaattattggcggtatcggcgtgt 53173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 524 - 595
Target Start/End: Original strand, 135309 - 135378
Alignment:
Q  524 acacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||| |||||||| |||  || || |||||||||||||||||||| |||||||| ||||||| ||||    
T  135309 acacgacaccgacacatataat--tacacagaattatgtgattttctcaaattattagcagtgtcggtgtgt 135378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 588
Target Start/End: Original strand, 44516 - 44584
Alignment:
Q  518 acaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtc 588  Q
    ||||| |||||| || |||||||| |||  || ||||||||||||||||||||||| || |||||||||||    
T  44516 acaccgacacgataccgacacatataat--tacactgaattatgtgattttctcaaatttttagcggtgtc 44584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 604
Target Start/End: Complemental strand, 28885 - 28834
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgttcg 604  Q
    ||||||||| |||||||| || |||||| |||||||||||||| ||||||||    
T  28885 tgaattatgcgattttcttaaattattaacggtgtcggcgtgttagtgttcg 28834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 601
Target Start/End: Original strand, 192274 - 192321
Alignment:
Q  554 gaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    ||||||||| |||||||||| |||||| |||||||||||||| |||||    
T  192274 gaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgt 192321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 587
Target Start/End: Original strand, 263362 - 263430
Alignment:
Q  517 gacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgt 587  Q
    |||||| ||||||||||||||| || |||  || ||||||||||||| ||||||||| |||||||| ||||    
T  263362 gacaccgacacgacactgacacttataat--tacactgaattatgtggttttctcaaattattagcagtgt 263430  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 601
Target Start/End: Complemental strand, 241669 - 241581
Alignment:
Q  511 gtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtgt 601  Q
    |||| ||||||||||||||||| |||||  | |||  || ||| ||||||||||||||  ||| |||||||| |||||||||||| |||||    
T  241669 gtgtccgacaccaacacgacaccgacactcataat--tacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgt 241581  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 553 - 595
Target Start/End: Complemental strand, 26428 - 26386
Alignment:
Q  553 tgaattatgtgattttctcaatttattagcggtgtcggcgtgt 595  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||    
T  26428 tgaattatgtgattttctcaaattattagtggtgtcgacgtgt 26386  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 511 - 591
Target Start/End: Original strand, 3833 - 3911
Alignment:
Q  511 gtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtgtcggc 591  Q
    |||| ||||||||||||||||||||||| |  ||  ||| |||||||||||||||||| | || |||||| | ||||||||    
T  3833 gtgtccgacaccaacacgacactgacacttgtaa--ttacactgaattatgtgatttttttaaattattaaccgtgtcggc 3911  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 586
Target Start/End: Original strand, 68225 - 68299
Alignment:
Q  510 tgtgttcgacaccaacacgacactgacacataaaatgttaaactgaattatgtgattttctcaatttattagcggtg 586  Q
    ||||||||||||| | ||||||||||||| || ||  ||| ||| |||||| |||||||||||| |||||| |||||    
T  68225 tgtgttcgacaccgatacgacactgacacctataa--ttatactaaattatatgattttctcaaattattaacggtg 68299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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