View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10455_2 (Length: 724)

Name: NF10455_2
Description: NF10455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10455_2
NF10455_2
[»] chr8 (1 HSPs)
chr8 (28-708)||(36950386-36951069)


Alignment Details
Target: chr8 (Bit Score: 625; Significance: 0; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 625; E-Value: 0
Query Start/End: Original strand, 28 - 708
Target Start/End: Original strand, 36950386 - 36951069
Alignment:
Q  28 aatgttgcttcctttgtgatgttgattacagaaaagtttagggattctcaattgtcatagctcttgtaaaaatcaacatatctgttgttgatcttctagg 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36950386 aatgttgcttcctttgtgatgttgattacagaaaagtttagggattctcaattgtcatagctcttgtaaaaatcaacatatctgttgttgatcttctagg 36950485  T
Q  128 tgtgttgtgttgtatgtagtttaaattgtttcaaattaccagagaataaagaaacaaattattatttaccactcataaaaagattattgaaaataatggt 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36950486 tgtgttgtgttgtatgtagtttaaattgtttcaaattaccagagaataaagaaacaaattattatttaccactcataaaaagattattgaaaataatggt 36950585  T
Q  228 tggtaaaaacatctaaataagtggatggtccctcctttttctgtctttggaattttgcgggaaaagattccaaaagcattctttagcgttgaaacctgtt 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36950586 tggtaaaaacatctaaataagtggatggtccctcctttttctgtctttggaattttgcgggaaaagattccaaaagcattctttagtgttgaaacctgtt 36950685  T
Q  328 aaaggattcattgttgttttttcttccgtgttttcaaactcattatattggctgtatatgtttcagattgggtcacaataaaaagctggtggatgagaag 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36950686 aaaggattcattgttgttttttcttccgtgttttcaaactcattatattggctgtatatgtttcagattgggtcacaataaaaagctggtcgatgagaag 36950785  T
Q  428 atgaannnnnnnnatcttagctgtgagtaacatgtttaacctttcaaaagaaatggctcacttcctgaagttatctaaataaattagtgatattctgcta 527  Q
    |||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36950786 atgaattttttttatcttagctgtgagtaacatgtttaacctttcaaaagaaatggctcacttcctgaagttatctaaataaattagtgatattctgcta 36950885  T
Q  528 gtcatggaggacaatggaaggtaatgttcatagaaattacta--ctttcctattcattctcctttg-ttttgtattttgttttgaccgtgtattctgttc 624  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36950886 gtcatggaggacaatggaaggtaatgttcatagaaattactattctttcctattcattctcctttgtttttgtattttgttttgaccgtgtattctgttc 36950985  T
Q  625 tgtatgcatgtagcaatgtattgttatttaactgtttcttgttaacgtaggtttgaagagaagtcctttacaaatgatgatgtc 708  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  36950986 tgtatgcatgtagcaatgtattgttatttaactgtttcctgttaacgtaggtttgaagagaagtcctttacaaatggtgatgtc 36951069  T

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