View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10455_4 (Length: 597)

Name: NF10455_4
Description: NF10455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10455_4
NF10455_4
[»] chr6 (10 HSPs)
chr6 (14-72)||(25325513-25325571)
chr6 (14-72)||(26155206-26155264)
chr6 (69-130)||(25325598-25325659)
chr6 (69-130)||(26155291-26155352)
chr6 (206-269)||(3552047-3552109)
chr6 (205-268)||(35213454-35213515)
chr6 (216-268)||(5522532-5522583)
chr6 (205-268)||(13143275-13143336)
chr6 (149-187)||(9083088-9083126)
chr6 (205-265)||(31883199-31883258)
[»] chr4 (26 HSPs)
chr4 (203-269)||(47744404-47744470)
chr4 (204-272)||(19748750-19748817)
chr4 (204-272)||(19790989-19791056)
chr4 (216-272)||(12595519-12595574)
chr4 (209-272)||(1872728-1872790)
chr4 (205-267)||(45143567-45143627)
chr4 (205-267)||(45152336-45152396)
chr4 (206-269)||(1627447-1627512)
chr4 (149-185)||(20760261-20760297)
chr4 (149-185)||(20766652-20766688)
chr4 (205-269)||(50831647-50831710)
chr4 (198-269)||(6520725-6520795)
chr4 (205-268)||(17683458-17683519)
chr4 (205-268)||(22819766-22819827)
chr4 (198-249)||(24990224-24990275)
chr4 (206-272)||(19174663-19174728)
chr4 (149-183)||(52204856-52204890)
chr4 (207-272)||(23667997-23668061)
chr4 (203-268)||(37060430-37060494)
chr4 (206-269)||(46038780-46038840)
chr4 (205-269)||(336699-336762)
chr4 (149-197)||(2738285-2738333)
chr4 (151-183)||(15984780-15984812)
chr4 (220-268)||(40609745-40609793)
chr4 (205-269)||(42491190-42491253)
chr4 (150-182)||(46523816-46523848)
[»] chr2 (15 HSPs)
chr2 (206-272)||(39147883-39147948)
chr2 (149-197)||(17159572-17159620)
chr2 (216-272)||(8427680-8427735)
chr2 (149-181)||(17917395-17917427)
chr2 (206-269)||(14255420-14255482)
chr2 (206-273)||(20532350-20532416)
chr2 (206-269)||(27490622-27490684)
chr2 (205-268)||(36517313-36517374)
chr2 (205-268)||(37105755-37105816)
chr2 (226-268)||(38821501-38821543)
chr2 (149-186)||(3771377-3771414)
chr2 (220-265)||(30546255-30546300)
chr2 (220-268)||(13765531-13765578)
chr2 (149-185)||(26481119-26481155)
chr2 (204-272)||(31296653-31296720)
[»] chr3 (16 HSPs)
chr3 (206-272)||(46965898-46965963)
chr3 (205-272)||(819102-819168)
chr3 (205-268)||(46852025-46852086)
chr3 (207-269)||(46965992-46966053)
chr3 (149-181)||(39350605-39350637)
chr3 (205-268)||(9158765-9158827)
chr3 (205-268)||(39697115-39697176)
chr3 (205-268)||(51465807-51465868)
chr3 (226-268)||(10811272-10811314)
chr3 (151-185)||(43143524-43143558)
chr3 (149-185)||(19150348-19150384)
chr3 (205-265)||(26645143-26645201)
chr3 (216-272)||(33256436-33256491)
chr3 (206-266)||(37561829-37561888)
chr3 (149-181)||(38363254-38363286)
chr3 (216-272)||(41637187-41637242)
[»] chr7 (9 HSPs)
chr7 (206-267)||(1504254-1504314)
chr7 (205-269)||(41018780-41018843)
chr7 (149-187)||(42598235-42598273)
chr7 (204-268)||(11352867-11352929)
chr7 (198-269)||(20337420-20337490)
chr7 (205-269)||(1284530-1284593)
chr7 (223-267)||(22638777-22638821)
chr7 (220-268)||(34757363-34757411)
chr7 (205-269)||(43159467-43159530)
[»] chr1 (19 HSPs)
chr1 (205-268)||(32914965-32915026)
chr1 (149-187)||(12306161-12306199)
chr1 (149-187)||(45430805-45430843)
chr1 (149-185)||(30535997-30536033)
chr1 (149-181)||(48325228-48325260)
chr1 (205-268)||(10889939-10890000)
chr1 (205-268)||(13489779-13489840)
chr1 (205-268)||(50328034-50328095)
chr1 (235-273)||(6340872-6340910)
chr1 (149-182)||(7648256-7648289)
chr1 (149-185)||(1689397-1689433)
chr1 (149-181)||(16987453-16987485)
chr1 (204-272)||(32923362-32923429)
chr1 (149-185)||(33173720-33173756)
chr1 (149-185)||(45863750-45863786)
chr1 (220-268)||(47215622-47215670)
chr1 (149-185)||(49931559-49931595)
chr1 (149-185)||(50775186-50775222)
chr1 (205-269)||(51571238-51571301)
[»] chr5 (13 HSPs)
chr5 (204-269)||(27546181-27546245)
chr5 (220-268)||(32912169-32912216)
chr5 (205-268)||(8675326-8675387)
chr5 (205-268)||(9226417-9226479)
chr5 (205-268)||(19839879-19839940)
chr5 (204-269)||(24405847-24405911)
chr5 (220-268)||(189596-189643)
chr5 (149-181)||(5996673-5996705)
chr5 (149-181)||(6529025-6529057)
chr5 (149-181)||(11881020-11881052)
chr5 (149-197)||(13309888-13309936)
chr5 (149-185)||(26686887-26686923)
chr5 (149-185)||(26956618-26956654)
[»] chr8 (6 HSPs)
chr8 (149-197)||(36023090-36023138)
chr8 (149-185)||(37942936-37942972)
chr8 (205-268)||(42110075-42110137)
chr8 (226-268)||(37657126-37657168)
chr8 (204-269)||(39856153-39856217)
chr8 (205-269)||(13106596-13106659)
[»] scaffold0141 (1 HSPs)
scaffold0141 (205-268)||(12049-12110)


Alignment Details
Target: chr6 (Bit Score: 59; Significance: 1e-24; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 25325513 - 25325571
Alignment:
Q  14 cgttttgttggaacacaagtatgtttgtgatttgaaaaattcctagaaatctaacatag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25325513 cgttttgttggaacacaagtatgtttgtgatttgaaaaattcctagaaatctaacatag 25325571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 26155206 - 26155264
Alignment:
Q  14 cgttttgttggaacacaagtatgtttgtgatttgaaaaattcctagaaatctaacatag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26155206 cgttttgttggaacacaagtatgtttgtgatttgaaaaattcctagaaatctaacatag 26155264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 25325598 - 25325659
Alignment:
Q  69 atagtggaggtagacctcttggtgtgtgctctatttggtaccctgttttgtaagaggacgat 130  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25325598 atagtggaggtagacctcttggtgtgtgctctattgggtaccctgttttgtaagaggacgat 25325659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 26155291 - 26155352
Alignment:
Q  69 atagtggaggtagacctcttggtgtgtgctctatttggtaccctgttttgtaagaggacgat 130  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26155291 atagtggaggtagacctcttggtgtgtgctctattgggtaccctgttttgtaagaggacgat 26155352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 3552109 - 3552047
Alignment:
Q  206 ttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    ||||||||| |||||||||||| || |||||||| |||||| |||| |||||||||||||||||    
T  3552109 ttttctttgtaaatttatgattatcacaaaagttatcatcc-aaatggttgttcaaataacaca 3552047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 35213515 - 35213454
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| |||||||||||||||||||||| || |||| ||||||||||||||||    
T  35213515 tttttctttgtaaatt-atgattgtcccaaaagttgtcaacc-aaatggttgttcaaataacac 35213454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 5522583 - 5522532
Alignment:
Q  216 aaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    ||||||||| |||| ||||||||||||| ||||||| ||||||||||||||||    
T  5522583 aaatttatggttgttccaaaagttgtca-ccaaaattgttgttcaaataacac 5522532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 13143336 - 13143275
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| ||| |||||||||||||||||| || |||| ||||||||||||||||    
T  13143336 tttttctttgtaaatt-atggttgtcccaaaagttgtcaacc-aaatggttgttcaaataacac 13143275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 187
Target Start/End: Complemental strand, 9083126 - 9083088
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtgata 187  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  9083126 tgatatttgtataactattttttaacaatttttgtgata 9083088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 31883258 - 31883199
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataa 265  Q
    |||||||||| ||| ||||| ||||||||||| ||||||  | ||||||||||||||||||    
T  31883258 tttttctttgtaaaattatggttgtcccaaaaattgtcaatc-aaatagttgttcaaataa 31883199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 203 - 269
Target Start/End: Complemental strand, 47744470 - 47744404
Alignment:
Q  203 catttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    |||||||||||| ||| ||||| |||||||||||||| |||  ||||||||||||||||||||||||    
T  47744470 catttttctttgtaaaattatggttgtcccaaaagttatcaatcaaaatagttgttcaaataacaca 47744404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 204 - 272
Target Start/End: Original strand, 19748750 - 19748817
Alignment:
Q  204 atttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacacatct 272  Q
    ||||||||||| ||||||||||||||  |||||||| ||| |||||||| |||||||||||||||||||    
T  19748750 atttttctttgtaaatttatgattgtttcaaaagttatca-ccaaaataattgttcaaataacacatct 19748817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 19791056 - 19790989
Alignment:
Q  204 atttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacacatct 272  Q
    ||||||||||| ||||||||||||||  |||||||| ||| |||||||| |||||||||||||||||||    
T  19791056 atttttctttgtaaatttatgattgtttcaaaagttatca-ccaaaataattgttcaaataacacatct 19790989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 12595574 - 12595519
Alignment:
Q  216 aaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacacatct 272  Q
    ||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||    
T  12595574 aaatttatggttgtcccaaaaattgtcatc-aaaatggttgttcaaataacacatct 12595519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 209 - 272
Target Start/End: Original strand, 1872728 - 1872790
Alignment:
Q  209 tctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacacatct 272  Q
    |||||| |||||||||||||||||||||||| |||||| | ||  |||||||||||||||||||    
T  1872728 tctttgtaaatttatgattgtcccaaaagttatcatcc-agatgattgttcaaataacacatct 1872790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 45143627 - 45143567
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataaca 267  Q
    |||||||||| ||||| ||| |||||||||||||||||| || ||||||||||||||||||||    
T  45143627 tttttctttgtaaatt-atggttgtcccaaaagttgtcaacc-aaatagttgttcaaataaca 45143567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 45152396 - 45152336
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataaca 267  Q
    |||||||||| ||||| ||| |||||||||||||||||| || ||||||||||||||||||||    
T  45152396 tttttctttgtaaatt-atggttgtcccaaaagttgtcaacc-aaatagttgttcaaataaca 45152336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 1627512 - 1627447
Alignment:
Q  206 ttttctttgaaaatttatgattgtcccaa---aagttgtcatccaaaatagttgttcaaataacaca 269  Q
    ||||||||| ||||||||| ||||| |||   ||||||||||||||| |||||||||||||||||||    
T  1627512 ttttctttgtaaatttatggttgtcacaacaaaagttgtcatccaaa-tagttgttcaaataacaca 1627447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 20760261 - 20760297
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtga 185  Q
    |||||||||||||||||||||||||||| ||||||||    
T  20760261 tgatatttgtacaattattttttaacaacttttgtga 20760297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 20766652 - 20766688
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtga 185  Q
    |||||||||||||||||||||||||||| ||||||||    
T  20766652 tgatatttgtacaattattttttaacaacttttgtga 20766688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 50831710 - 50831647
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    |||||||||| ||| ||||| ||||||||||||||||||  | |||| |||||||||||||||||    
T  50831710 tttttctttgtaaaattatggttgtcccaaaagttgtcaatc-aaatggttgttcaaataacaca 50831647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 6520795 - 6520725
Alignment:
Q  198 acacccatttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    ||||| |||||||||||||| |||||| |||| |||||  ||||||| | |||| |||||||||||||||||    
T  6520795 acacctatttttctttgaaattttatggttgtaccaaatattgtcatac-aaatggttgttcaaataacaca 6520725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 17683458 - 17683519
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| ||| |||||||||||||||||| || |||| ||||||||||||||||    
T  17683458 tttttctttgtaaatt-atggttgtcccaaaagttgtcaacc-aaatggttgttcaaataacac 17683519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 22819766 - 22819827
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| ||| |||||||||||||||||| || |||| ||||||||||||||||    
T  22819766 tttttctttgtaaatt-atggttgtcccaaaagttgtcaacc-aaatggttgttcaaataacac 22819827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 24990224 - 24990275
Alignment:
Q  198 acacccatttttctttgaaaatttatgattgtcccaaaagttgtcatccaaa 249  Q
    ||||| ||||||||||| ||||||||| |||||||| |||||||||| ||||    
T  24990224 acacctatttttctttgtaaatttatggttgtcccataagttgtcatacaaa 24990275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 272
Target Start/End: Complemental strand, 19174728 - 19174663
Alignment:
Q  206 ttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacacatct 272  Q
    ||||||||| ||||||||| ||||| |||||||||||| |  || | ||||||||||||||||||||    
T  19174728 ttttctttgtaaatttatgtttgtctcaaaagttgtca-cacaattggttgttcaaataacacatct 19174663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 52204856 - 52204890
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgt 183  Q
    ||||||||| |||||||||||||||||||||||||    
T  52204856 tgatatttgaacaattattttttaacaatttttgt 52204890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 23667997 - 23668061
Alignment:
Q  207 tttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacacatct 272  Q
    |||||||| ||||| |||||||||||||||||||||| | |||||  ||||| || ||||||||||    
T  23667997 tttctttgtaaattaatgattgtcccaaaagttgtca-ctaaaatgattgtttaattaacacatct 23668061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 37060430 - 37060494
Alignment:
Q  203 catttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||||| ||||||| | ||||| |||||||||||| | ||||| ||| ||||||||||||    
T  37060430 catttttctttgtaaatttagg-ttgtctcaaaagttgtcaacaaaaatggttattcaaataacac 37060494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 46038780 - 46038840
Alignment:
Q  206 ttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    ||||||||| |||||||||||| ||  ||||||||||||   ||||| ||||||||||||||||    
T  46038780 ttttctttgtaaatttatgattatcataaaagttgtcat---aaataattgttcaaataacaca 46038840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 336762 - 336699
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    |||||||||| ||||| ||| ||||  |||||||||||||  |||| ||||||||||||||||||    
T  336762 tttttctttgcaaattaatggttgtatcaaaagttgtcat-aaaaaaagttgttcaaataacaca 336699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 2738333 - 2738285
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtgatatctctctctc 197  Q
    ||||||||| ||||| ||||||| ||||||||||||||| || ||||||    
T  2738333 tgatatttgaacaatcattttttgacaatttttgtgataactttctctc 2738285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 15984812 - 15984780
Alignment:
Q  151 atatttgtacaattattttttaacaatttttgt 183  Q
    |||||||||||| ||||||||||||||||||||    
T  15984812 atatttgtacaactattttttaacaatttttgt 15984780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 40609745 - 40609793
Alignment:
Q  220 ttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    ||||| ||||| |||||||||||| ||||| | ||||||||||||||||    
T  40609745 ttatggttgtcacaaaagttgtcaaccaaattggttgttcaaataacac 40609793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 42491190 - 42491253
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    ||||||||||  || ||||| ||||||||||||||||||  | |||| |||||||||||||||||    
T  42491190 tttttctttgtgaaattatggttgtcccaaaagttgtcaatc-aaatggttgttcaaataacaca 42491253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 182
Target Start/End: Complemental strand, 46523848 - 46523816
Alignment:
Q  150 gatatttgtacaattattttttaacaatttttg 182  Q
    ||||||||||||| |||||||||||||||||||    
T  46523848 gatatttgtacaactattttttaacaatttttg 46523816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 206 - 272
Target Start/End: Original strand, 39147883 - 39147948
Alignment:
Q  206 ttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacacatct 272  Q
    |||| |||| |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  39147883 ttttttttgtaaatttatgattgtcccaaaagttgtcat-taaaatggttgttcaaataacacatct 39147948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 17159572 - 17159620
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtgatatctctctctc 197  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  17159572 tgatatttgtacaactattttttaacaattttttagatatctctctctc 17159620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 8427680 - 8427735
Alignment:
Q  216 aaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacacatct 272  Q
    ||||||||| |||| |||||||||| || |||||||| |||||||||||||||||||    
T  8427680 aaatttatggttgttccaaaagttgcca-ccaaaataattgttcaaataacacatct 8427735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 17917395 - 17917427
Alignment:
Q  149 tgatatttgtacaattattttttaacaattttt 181  Q
    |||||||||||||||||||||||||||||||||    
T  17917395 tgatatttgtacaattattttttaacaattttt 17917427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 14255420 - 14255482
Alignment:
Q  206 ttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    ||||||||| ||||||||| |||||||||||||||||  |  |||| |||||||||||||||||    
T  14255420 ttttctttgtaaatttatggttgtcccaaaagttgtc-gcataaatggttgttcaaataacaca 14255482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 20532416 - 20532350
Alignment:
Q  206 ttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacacatctt 273  Q
    ||||||||  ||||||||| || ||||| ||||| |||| |||| |||||||||||||||||||||||    
T  20532416 ttttctttataaatttatggttatcccataagttatcatacaaa-tagttgttcaaataacacatctt 20532350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 27490684 - 27490622
Alignment:
Q  206 ttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    ||||||||| ||| || |||||||| ||||||||||||| |||||| | |||||||||||||||    
T  27490684 ttttctttgtaaaattttgattgtcacaaaagttgtcat-caaaatggatgttcaaataacaca 27490622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 36517313 - 36517374
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| |||||||||||||||||| |||  |||| ||||||||||||||||||    
T  36517313 tttttctttgtaaatt-atgattgtcccaaaagttatcaatcaaa-tagttgttcaaataacac 36517374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 37105755 - 37105816
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| ||| ||||| |||||||||||| ||||| ||||||||||||||||||    
T  37105755 tttttctttgtaaatt-atggttgtcacaaaagttgtcaaccaaa-tagttgttcaaataacac 37105816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 38821501 - 38821543
Alignment:
Q  226 ttgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||||||||||| | ||||| ||||||||||||||||    
T  38821501 ttgtcccaaaagttgtcaacaaaaattgttgttcaaataacac 38821543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 3771377 - 3771414
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtgat 186  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  3771377 tgatatttgtacaatcattttttaataatttttgtgat 3771414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 30546300 - 30546255
Alignment:
Q  220 ttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataa 265  Q
    ||||| ||||| |||||||||||| ||||| |||||||||||||||    
T  30546300 ttatggttgtcacaaaagttgtcaaccaaattagttgttcaaataa 30546255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 13765531 - 13765578
Alignment:
Q  220 ttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||||||    
T  13765531 ttatggttgtcccaaaagttgtcaacc-aaatggttgttcaaataacac 13765578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 26481155 - 26481119
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtga 185  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  26481155 tgatatttgaacaattattttttaacaacttttgtga 26481119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 272
Target Start/End: Original strand, 31296653 - 31296720
Alignment:
Q  204 atttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacacatct 272  Q
    ||||||||||| ||||||||| |||||  ||||||||||| |   ||| ||||||||||||||||||||    
T  31296653 atttttctttgtaaatttatggttgtcataaaagttgtca-cactaatggttgttcaaataacacatct 31296720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 206 - 272
Target Start/End: Complemental strand, 46965963 - 46965898
Alignment:
Q  206 ttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacacatct 272  Q
    ||||||||| |||||||||||||||| ||||||||||| |  |||| ||||||||||||||||||||    
T  46965963 ttttctttgtaaatttatgattgtcctaaaagttgtca-cacaaattgttgttcaaataacacatct 46965898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 205 - 272
Target Start/End: Complemental strand, 819168 - 819102
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacacatct 272  Q
    |||||||||| ||||| |||||| || ||||||||||||| |||||| |||||| |||||||||||||    
T  819168 tttttctttgtaaattaatgattatctcaaaagttgtcat-caaaatggttgtttaaataacacatct 819102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 46852086 - 46852025
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| |||||||||||||||||||||| || |||| ||||||||||||||||    
T  46852086 tttttctttgtaaatt-atgattgtcccaaaagttgtcaacc-aaatggttgttcaaataacac 46852025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 46966053 - 46965992
Alignment:
Q  207 tttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    |||||||| |||||||||||||||| ||||||||||| |  |||| |||||||||||||||||    
T  46966053 tttctttgtaaatttatgattgtccgaaaagttgtca-cacaaatggttgttcaaataacaca 46965992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 39350637 - 39350605
Alignment:
Q  149 tgatatttgtacaattattttttaacaattttt 181  Q
    |||||||||||||||||||||||||||||||||    
T  39350637 tgatatttgtacaattattttttaacaattttt 39350605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 9158827 - 9158765
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| ||| ||||| || ||||||||| ||||| ||||||||||||||||||    
T  9158827 tttttctttgtaaatt-atggttgtcacataagttgtcaaccaaattagttgttcaaataacac 9158765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 39697176 - 39697115
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| ||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  39697176 tttttctttgtaaatt-atggttgtcccaaaagttgtcaatcaaa-tagttgttcaaataacac 39697115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 51465868 - 51465807
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| ||| |||||||||||||||||| || |||| ||||||||||||||||    
T  51465868 tttttctttgtaaatt-atggttgtcccaaaagttgtcaacc-aaatggttgttcaaataacac 51465807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 10811272 - 10811314
Alignment:
Q  226 ttgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||||||||||| | ||||| ||||||||||||||||    
T  10811272 ttgtcccaaaagttgtcaacaaaaatggttgttcaaataacac 10811314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 185
Target Start/End: Original strand, 43143524 - 43143558
Alignment:
Q  151 atatttgtacaattattttttaacaatttttgtga 185  Q
    |||||||||||||||||||||| ||||||||||||    
T  43143524 atatttgtacaattattttttatcaatttttgtga 43143558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 19150384 - 19150348
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtga 185  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  19150384 tgatatttgtacaatcattttttaacaacttttgtga 19150348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 26645143 - 26645201
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataa 265  Q
    |||||||||| ||||| |||||| ||||| || ||||||||| ||||||||||||||||||    
T  26645143 tttttctttgtaaatt-atgattatcccataaattgtcatcc-aaatagttgttcaaataa 26645201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 33256436 - 33256491
Alignment:
Q  216 aaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacacatct 272  Q
    ||||||||| |||||| |||||||||||  |||| | ||||||||||||||||||||    
T  33256436 aaatttatggttgtcctaaaagttgtcacacaaa-tggttgttcaaataacacatct 33256491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 37561829 - 37561888
Alignment:
Q  206 ttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataac 266  Q
    ||||||||| ||||| ||||||||||||||| |||| || | ||||||||||| |||||||    
T  37561829 ttttctttgtaaattcatgattgtcccaaaaattgttatgc-aaatagttgtttaaataac 37561888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 38363286 - 38363254
Alignment:
Q  149 tgatatttgtacaattattttttaacaattttt 181  Q
    ||||||||||||||||||||||||| |||||||    
T  38363286 tgatatttgtacaattattttttaataattttt 38363254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 41637242 - 41637187
Alignment:
Q  216 aaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacacatct 272  Q
    ||||| ||| |||||||||||||| ||||| |||||| ||||||||||| |||||||    
T  41637242 aaattaatggttgtcccaaaagttatcatc-aaaataattgttcaaatagcacatct 41637187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000004; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 206 - 267
Target Start/End: Complemental strand, 1504314 - 1504254
Alignment:
Q  206 ttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataaca 267  Q
    ||||||||  |||||||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  1504314 ttttctttataaatttatgattgtcccaaaagttatca-ccaaaatggttgttcaaataaca 1504254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 41018780 - 41018843
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    |||||||||| |||||||||||||||  ||||||||||| || |||||||| |||||||||||||    
T  41018780 tttttctttgtaaatttatgattgtcataaaagttgtca-cctaaatagttattcaaataacaca 41018843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Complemental strand, 42598273 - 42598235
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtgata 187  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  42598273 tgatatttgtacaactattttttaacaatttttgtgata 42598235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 11352929 - 11352867
Alignment:
Q  204 atttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    ||||||||||| ||||| ||| |||||||||||||||||| || |||| ||||||||||||||||    
T  11352929 atttttctttgtaaatt-atggttgtcccaaaagttgtcaacc-aaatggttgttcaaataacac 11352867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 20337420 - 20337490
Alignment:
Q  198 acacccatttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    |||| |||| ||||||| ||||||||| || || || |||||||||| |||| |||||||||||||||||||    
T  20337420 acactcattgttctttgtaaatttatggttatctcataagttgtcatacaaa-tagttgttcaaataacaca 20337490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 1284530 - 1284593
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    |||||||||  ||||||||||||||  |||||||| ||||  ||||| |||||||||||||||||    
T  1284530 tttttcttttcaaatttatgattgtatcaaaagttatcat-aaaaatggttgttcaaataacaca 1284593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 22638821 - 22638777
Alignment:
Q  223 tgattgtcccaaaagttgtcatccaaaatagttgttcaaataaca 267  Q
    ||||||||||| |||||||| | |||||| |||||||||||||||    
T  22638821 tgattgtcccacaagttgtcctacaaaatggttgttcaaataaca 22638777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 34757411 - 34757363
Alignment:
Q  220 ttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    ||||| ||||| |||||||||||| ||||| | ||||||||||||||||    
T  34757411 ttatggttgtcacaaaagttgtcaaccaaattggttgttcaaataacac 34757363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 43159530 - 43159467
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    |||||||||| ||||||||| |||||   |||||||||| || |||| |||||||||||||||||    
T  43159530 tttttctttgtaaatttatggttgtcatcaaagttgtca-cctaaatggttgttcaaataacaca 43159467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000006; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 32915026 - 32914965
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| |||||||| ||||||||||||| || |||||||||||||||||||||    
T  32915026 tttttctttgtaaatt-atgattgttccaaaagttgtcaacc-aaatagttgttcaaataacac 32914965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Complemental strand, 12306199 - 12306161
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtgata 187  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  12306199 tgatatttgtacaattattttataacaatttttgtgata 12306161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 45430805 - 45430843
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtgata 187  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  45430805 tgatatttgtacaattattttttaataatttttgtgata 45430843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 30535997 - 30536033
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtga 185  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30535997 tgatatttgtacaatcattttttaacaatttttgtga 30536033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 48325228 - 48325260
Alignment:
Q  149 tgatatttgtacaattattttttaacaattttt 181  Q
    |||||||||||||||||||||||||||||||||    
T  48325228 tgatatttgtacaattattttttaacaattttt 48325260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 10890000 - 10889939
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| ||| ||||| |||||||||||| ||||| ||||||||||||||||||    
T  10890000 tttttctttgtaaatt-atggttgtcacaaaagttgtcaaccaaa-tagttgttcaaataacac 10889939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 13489779 - 13489840
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| ||| |||||||| ||||||||| ||||| ||||||||||||||||||    
T  13489779 tttttctttgtaaatt-atggttgtcccagaagttgtcaaccaaa-tagttgttcaaataacac 13489840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 50328095 - 50328034
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| ||| |||||||||||||||||| || |||| ||||||||||||||||    
T  50328095 tttttctttgtaaatt-atggttgtcccaaaagttgtcaacc-aaatggttgttcaaataacac 50328034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 6340872 - 6340910
Alignment:
Q  235 aagttgtcatccaaaatagttgttcaaataacacatctt 273  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  6340872 aagttgtcatctaaaaaagttgttcaaataacacatctt 6340910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 7648256 - 7648289
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttg 182  Q
    ||||||||||||||||||||| ||||||||||||    
T  7648256 tgatatttgtacaattattttgtaacaatttttg 7648289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 1689397 - 1689433
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtga 185  Q
    |||||||||||||| |||||| |||||||||||||||    
T  1689397 tgatatttgtacaactattttataacaatttttgtga 1689433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 16987453 - 16987485
Alignment:
Q  149 tgatatttgtacaattattttttaacaattttt 181  Q
    |||||||||||||||||||||||||||| ||||    
T  16987453 tgatatttgtacaattattttttaacaactttt 16987485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 272
Target Start/End: Original strand, 32923362 - 32923429
Alignment:
Q  204 atttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacacatct 272  Q
    |||||| |||| ||||||||||||||||||||| ||||| ||  ||||  |||||||||| ||||||||    
T  32923362 atttttatttgtaaatttatgattgtcccaaaaattgtc-tcacaaatgattgttcaaattacacatct 32923429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 33173756 - 33173720
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtga 185  Q
    ||||||||||||||||||||||| | |||||||||||    
T  33173756 tgatatttgtacaattatttttttataatttttgtga 33173720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 45863786 - 45863750
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtga 185  Q
    ||||||||||||||||||||||| | |||||||||||    
T  45863786 tgatatttgtacaattattttttgataatttttgtga 45863750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 47215670 - 47215622
Alignment:
Q  220 ttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    ||||| ||||| |||||||| ||| ||||| ||||||||||||||||||    
T  47215670 ttatggttgtcacaaaagttatcaaccaaattagttgttcaaataacac 47215622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 49931559 - 49931595
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtga 185  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  49931559 tgatatttgtacaatcattttttaacaacttttgtga 49931595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 50775222 - 50775186
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtga 185  Q
    |||||||| |||||||||||||| |||||||||||||    
T  50775222 tgatatttatacaattattttttgacaatttttgtga 50775186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 51571301 - 51571238
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    |||||||||| ||| ||||| ||||||||||| ||||||  | |||| |||||||||||||||||    
T  51571301 tttttctttgtaaaattatggttgtcccaaaaattgtcaatc-aaatggttgttcaaataacaca 51571238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000009; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 27546181 - 27546245
Alignment:
Q  204 atttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    ||||||||||| | ||||||||||||| |||||||||||| |  |||||||| |||||||||||||    
T  27546181 atttttctttgtacatttatgattgtctcaaaagttgtca-cacaaatagttattcaaataacaca 27546245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 32912169 - 32912216
Alignment:
Q  220 ttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||||||||||||||||| || |||| ||||||||||||||||    
T  32912169 ttatgattgtcccaaaagttgtcaacc-aaatggttgttcaaataacac 32912216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 8675387 - 8675326
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| ||| |||||||||||||||||| || |||| ||||||||||||||||    
T  8675387 tttttctttgtaaatt-atggttgtcccaaaagttgtcaacc-aaatggttgttcaaataacac 8675326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 9226417 - 9226479
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| || |||||| |||||||||||| ||||| | ||||||||||||||||    
T  9226417 tttttctttgtaaatt-ataattgtcacaaaagttgtcaaccaaattggttgttcaaataacac 9226479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 19839940 - 19839879
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| ||| |||||||||||||| ||| ||||| ||||||||||||||||||    
T  19839940 tttttctttgtaaatt-atggttgtcccaaaagttatcaaccaaa-tagttgttcaaataacac 19839879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 24405911 - 24405847
Alignment:
Q  204 atttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    ||||||||||| ||||||||  ||||  ||||||||||||  |||| |||||||||||||||||||    
T  24405911 atttttctttgtaaatttatagttgtttcaaaagttgtcaaacaaa-tagttgttcaaataacaca 24405847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 189643 - 189596
Alignment:
Q  220 ttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||||||||||||||||| || ||||  |||||||||||||||    
T  189643 ttatgattgtcccaaaagttgtcaacc-aaatgattgttcaaataacac 189596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 5996673 - 5996705
Alignment:
Q  149 tgatatttgtacaattattttttaacaattttt 181  Q
    |||||||||||||| ||||||||||||||||||    
T  5996673 tgatatttgtacaactattttttaacaattttt 5996705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 6529025 - 6529057
Alignment:
Q  149 tgatatttgtacaattattttttaacaattttt 181  Q
    ||||||||||||||||||||| |||||||||||    
T  6529025 tgatatttgtacaattattttctaacaattttt 6529057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 11881052 - 11881020
Alignment:
Q  149 tgatatttgtacaattattttttaacaattttt 181  Q
    |||||||||||||||||||||||||||| ||||    
T  11881052 tgatatttgtacaattattttttaacaactttt 11881020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 13309888 - 13309936
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtgatatctctctctc 197  Q
    ||||||||| |||| |||||||| ||||||||||||||| || ||||||    
T  13309888 tgatatttgaacaactattttttgacaatttttgtgataactttctctc 13309936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 26686887 - 26686923
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtga 185  Q
    |||||||| |||||||||||||||| |||||||||||    
T  26686887 tgatatttatacaattattttttaataatttttgtga 26686923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 26956618 - 26956654
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtga 185  Q
    |||||||| |||||||||||||||| |||||||||||    
T  26956618 tgatatttatacaattattttttaataatttttgtga 26956654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000003; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 36023090 - 36023138
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtgatatctctctctc 197  Q
    ||||||||| |||||||||||||||||||||| |||| | |||||||||    
T  36023090 tgatatttgaacaattattttttaacaattttggtgacaactctctctc 36023138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 37942972 - 37942936
Alignment:
Q  149 tgatatttgtacaattattttttaacaatttttgtga 185  Q
    ||||||||||||||||||||||| |||||||||||||    
T  37942972 tgatatttgtacaattattttttgacaatttttgtga 37942936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 42110137 - 42110075
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| ||||| ||| || ||||||||| ||||| ||||||||||||||||||    
T  42110137 tttttctttgtaaatt-atgatcgtcacataagttgtcaaccaaattagttgttcaaataacac 42110075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 37657126 - 37657168
Alignment:
Q  226 ttgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||  |||||||||| |||||||||||||||||||||||    
T  37657126 ttgtccctgaagttgtcatacaaaatagttgttcaaataacac 37657168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 39856153 - 39856217
Alignment:
Q  204 atttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    |||||||||||  |||| |||||||||  ||||||| ||||  |||||||||||||||||||||||    
T  39856153 atttttctttgttaattcatgattgtcttaaaagttatcatt-aaaatagttgttcaaataacaca 39856217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 13106596 - 13106659
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacaca 269  Q
    |||||||||| ||||||||| ||||   ||||||||||| || |||| |||||||||||||||||    
T  13106596 tttttctttgtaaatttatggttgttataaaagttgtca-cctaaatggttgttcaaataacaca 13106659  T

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Target: scaffold0141 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 12049 - 12110
Alignment:
Q  205 tttttctttgaaaatttatgattgtcccaaaagttgtcatccaaaatagttgttcaaataacac 268  Q
    |||||||||| ||||| ||| ||||| |||||||||||| ||||| ||||||||||||||||||    
T  12049 tttttctttgtaaatt-atggttgtcgcaaaagttgtcaaccaaa-tagttgttcaaataacac 12110  T

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