View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10455_8 (Length: 358)
Name: NF10455_8
Description: NF10455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10455_8 |
 |  |
|
| [»] chr6 (5 HSPs) |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 133; Significance: 4e-69; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 199 - 358
Target Start/End: Original strand, 8041542 - 8041702
Alignment:
| Q |
199 |
tggcacac-ataaaggaagctagtgttattatatttttcaaataaatgaaagtcaacaaagcttataatctcaagtatatccaaagaccaatattaattc |
297 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
8041542 |
tggcacacgataaaggaagctagtgttattatatgtttcaaataaatgaaagtcaacaaagcttataatctcaagtatatctaaagaccaatattaattc |
8041641 |
T |
 |
| Q |
298 |
gttgctattcgtgcactaccatgtcgcaccaacaagctttttcctttaatgaatcaatatt |
358 |
Q |
| |
|
|||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
8041642 |
gttgctattcatgcactaacatgttgcaccaacaagctttttcctttaatgaatcaatatt |
8041702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 7972081 - 7972036
Alignment:
| Q |
147 |
gataaaggtttcactaaaatgaatggtagaagttgcaaattctatg |
192 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
7972081 |
gataaaggtttcactaaaatgaatggtataagttgcaaattctatg |
7972036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 8041417 - 8041469
Alignment:
| Q |
147 |
gataaaggtttcactaaaatgaatggtagaagttgcaaattctatgaacgact |
199 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||| || |||||| |
|
|
| T |
8041417 |
gataaaggtttcactaaaatgattagtagaagttgcaaattctctgtacgact |
8041469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 19090239 - 19090210
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
19090239 |
tgctcaaaagagagtgttgctagcattcct |
19090210 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 19737467 - 19737431
Alignment:
| Q |
12 |
agagacaatgctcaaaagagagtgttgctagcattcc |
48 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
19737467 |
agagagaatgttcaaaagagagtgttgctagcattcc |
19737431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 195 - 341
Target Start/End: Complemental strand, 23523199 - 23523052
Alignment:
| Q |
195 |
cgactggcacac-ataaaggaagctagtgttattatatttttcaaataaatgaaagtcaacaaagcttataatctcaagtatatccaaagaccaatatta |
293 |
Q |
| |
|
||||| |||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||| |
|
|
| T |
23523199 |
cgactagcacacgataaaggcagctagtgttattatatttttctaataaatgaaagtcaacaaagcttacaatctcaattatatccaaaggccaatatta |
23523100 |
T |
 |
| Q |
294 |
attcgttgctattcgtgcactaccatgtcgcaccaacaagctttttcc |
341 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
23523099 |
attcgttgctattcgtgcactaccatgtcacaccaacaagctttttcc |
23523052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 42862445 - 42862416
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
42862445 |
tgctcaaaagagagtgttgctagcattcct |
42862416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 44832619 - 44832648
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
44832619 |
tgctcaaaagagagtgttgctagcattcct |
44832648 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 45123670 - 45123544
Alignment:
| Q |
217 |
ctagtgttattatatttttcaaataaatgaaagtcaacaaagcttataatctcaagtatatccaaagaccaatattaattcgttgctattcgtgcactac |
316 |
Q |
| |
|
|||||||||||| ||||||| |||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
45123670 |
ctagtgttattacatttttctaataaatgaatgtcaacaaagcttacaatctcaagtatatccaaaggccaatattaattcgttgctatttgtgcactac |
45123571 |
T |
 |
| Q |
317 |
catgtcgcaccaacaagctttttcctt |
343 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
45123570 |
catgtcgcaccaacaagctttttcctt |
45123544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 1110233 - 1110196
Alignment:
| Q |
12 |
agagacaatgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
1110233 |
agagagaatgctcgaaagagagtgttgctagcattcct |
1110196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 20951633 - 20951604
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
20951633 |
tgctcaaaagagagtgttgctagcattcct |
20951604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 29806192 - 29806229
Alignment:
| Q |
12 |
agagacaatgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
29806192 |
agagagaatgctcaaaagagagtgttgctaacattcct |
29806229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 37398846 - 37398809
Alignment:
| Q |
12 |
agagacaatgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
37398846 |
agagagaatgctcaaaaaagagtgttgctagcattcct |
37398809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 195 - 343
Target Start/End: Original strand, 31384737 - 31384886
Alignment:
| Q |
195 |
cgactggcacaca-taaaggaagctagtgttattatatttttcaaataaatgaaagtcaacaaagcttataatctcaagtatatccaaagaccaatatta |
293 |
Q |
| |
|
|||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||| | |||| ||||||||| ||||||||| | || |||| |
|
|
| T |
31384737 |
cgactggcacacggtaaaggcagctagtgttgttatatttttcaaataaatgaaagtcaacgcaacttacaatctcaagcatatccaaaagctaacatta |
31384836 |
T |
 |
| Q |
294 |
attcgttgctattcgtgcactaccatgtcgcaccaacaagctttttcctt |
343 |
Q |
| |
|
|||||||||| ||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
31384837 |
attcgttgcttttcgtccactagcatgtcgcaccaacaagctttttcctt |
31384886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 195 - 344
Target Start/End: Complemental strand, 26558535 - 26558385
Alignment:
| Q |
195 |
cgactggcacac-ataaaggaagctagtgttattatatttttcaaataaatgaaagtcaacaaagcttataatctcaagtatatccaaagaccaatatta |
293 |
Q |
| |
|
|||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| ||||| |||| | |||||| |
|
|
| T |
26558535 |
cgactggcacacgatgcaggtagctagtgttattatatttttcaaataaatgaaagtcaacacaatttacaatctcaagcatatctaaaggctgatatta |
26558436 |
T |
 |
| Q |
294 |
attcgttgctattcgtgcactaccatgtcgcaccaacaagctttttccttt |
344 |
Q |
| |
|
||||||| | ||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
26558435 |
tttcgttggttttcgtgcactaacatgtcgcaccaacaaactttttccttt |
26558385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 26072251 - 26072288
Alignment:
| Q |
12 |
agagacaatgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
26072251 |
agagagaatgctcaaaagagagtgttgctagcattcct |
26072288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 47
Target Start/End: Original strand, 32050455 - 32050490
Alignment:
| Q |
12 |
agagacaatgctcaaaagagagtgttgctagcattc |
47 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| |
|
|
| T |
32050455 |
agagagaatgctcaaaagagagtgttgctagcattc |
32050490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 34368506 - 34368544
Alignment:
| Q |
11 |
cagagacaatgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
34368506 |
cagagagagtgctcaaaagagagtgttgctagcattcct |
34368544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 2443713 - 2443684
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
2443713 |
tgctcaaaagagagtgttgctagcattcct |
2443684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 4959305 - 4959276
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
4959305 |
tgctcaaaagagagtgttgctagcattcct |
4959276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 17568726 - 17568697
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
17568726 |
tgctcaaaagagagtgttgctagcattcct |
17568697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 42224744 - 42224773
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
42224744 |
tgctcaaaagagagtgttgctagcattcct |
42224773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 255
Target Start/End: Complemental strand, 48961346 - 48961307
Alignment:
| Q |
216 |
gctagtgttattatatttttcaaataaatgaaagtcaaca |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48961346 |
gctagtgttattatatttttcaaataaatgaaagtcaaca |
48961307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 341
Target Start/End: Complemental strand, 48960204 - 48960123
Alignment:
| Q |
259 |
cttataatctcaagtatatccaaagaccaatattaattcgttgctattcgtgcactaccatgtcgcaccaacaagctttttcc |
341 |
Q |
| |
|
|||| |||||||| ||||||||| || |||||| ||||| | | ||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
48960204 |
cttacaatctcaaacatatccaaatactaatattt-ttcgtaggttttcgtgcactaacatgccgcaccaacaagctttttcc |
48960123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 10769878 - 10769907
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
10769878 |
tgctcaaaagagagtgttgctagcattcct |
10769907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 29775166 - 29775137
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
29775166 |
tgctcaaaagagagtgttgctagcattcct |
29775137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 37600154 - 37600125
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
37600154 |
tgctcaaaagagagtgttgctagcattcct |
37600125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 54140917 - 54140888
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
54140917 |
tgctcaaaagagagtgttgctagcattcct |
54140888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 23142842 - 23142813
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
23142842 |
tgctcaaaagagagtgttgctagcattcct |
23142813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 30; Significance: 0.0000001; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 13919936 - 13919965
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
13919936 |
tgctcaaaagagagtgttgctagcattcct |
13919965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 14759799 - 14759828
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
14759799 |
tgctcaaaagagagtgttgctagcattcct |
14759828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 22786178 - 22786149
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
22786178 |
tgctcaaaagagagtgttgctagcattcct |
22786149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 27888437 - 27888466
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
27888437 |
tgctcaaaagagagtgttgctagcattcct |
27888466 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 37549651 - 37549622
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
37549651 |
tgctcaaaagagagtgttgctagcattcct |
37549622 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 30; Significance: 0.0000001; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 11135766 - 11135737
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
11135766 |
tgctcaaaagagagtgttgctagcattcct |
11135737 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 11430596 - 11430625
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
11430596 |
tgctcaaaagagagtgttgctagcattcct |
11430625 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 41095633 - 41095604
Alignment:
| Q |
20 |
tgctcaaaagagagtgttgctagcattcct |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
41095633 |
tgctcaaaagagagtgttgctagcattcct |
41095604 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 9165424 - 9165452
Alignment:
| Q |
18 |
aatgctcaaaagagagtgttgctagcatt |
46 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
9165424 |
aatgctcaaaagagagtgttgctagcatt |
9165452 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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