View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10457_high_1 (Length: 464)

Name: NF10457_high_1
Description: NF10457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10457_high_1
NF10457_high_1
[»] chr5 (41 HSPs)
chr5 (255-464)||(1759786-1759994)
chr5 (4-177)||(1759535-1759708)
chr5 (286-399)||(35653252-35653364)
chr5 (283-388)||(43414072-43414176)
chr5 (286-399)||(25017288-25017400)
chr5 (286-394)||(5151489-5151596)
chr5 (288-395)||(16315535-16315639)
chr5 (286-399)||(39567903-39568015)
chr5 (283-395)||(4421965-4422076)
chr5 (286-398)||(8410142-8410253)
chr5 (286-392)||(12068178-12068283)
chr5 (290-391)||(34546782-34546882)
chr5 (306-393)||(27823279-27823365)
chr5 (287-392)||(3639079-3639182)
chr5 (286-399)||(28143120-28143232)
chr5 (290-399)||(35945250-35945358)
chr5 (295-399)||(1479133-1479236)
chr5 (286-374)||(13951258-13951345)
chr5 (286-399)||(338761-338873)
chr5 (286-399)||(4962514-4962625)
chr5 (283-384)||(25568304-25568404)
chr5 (331-399)||(15915876-15915944)
chr5 (291-399)||(37243852-37243958)
chr5 (287-392)||(10017626-10017727)
chr5 (287-373)||(12914176-12914261)
chr5 (290-375)||(6823773-6823858)
chr5 (287-394)||(27535098-27535202)
chr5 (283-367)||(39693007-39693090)
chr5 (283-373)||(10406785-10406873)
chr5 (283-329)||(4838278-4838324)
chr5 (287-368)||(16899599-16899680)
chr5 (301-379)||(3015067-3015144)
chr5 (287-332)||(39335474-39335519)
chr5 (290-373)||(28599677-28599759)
chr5 (302-381)||(39042050-39042128)
chr5 (318-399)||(40099363-40099443)
chr5 (349-399)||(104926-104976)
chr5 (301-394)||(17168691-17168783)
chr5 (301-374)||(39069298-39069370)
chr5 (342-379)||(39167650-39167687)
chr5 (301-393)||(678465-678556)
[»] chr4 (48 HSPs)
chr4 (286-399)||(35808393-35808505)
chr4 (286-399)||(55669739-55669851)
chr4 (287-399)||(2362630-2362743)
chr4 (290-399)||(26040357-26040465)
chr4 (283-392)||(32131139-32131247)
chr4 (287-392)||(34016626-34016730)
chr4 (286-399)||(41956210-41956322)
chr4 (283-399)||(10100110-10100225)
chr4 (286-398)||(23765578-23765689)
chr4 (286-392)||(51266924-51267029)
chr4 (286-399)||(27839303-27839415)
chr4 (286-399)||(34316719-34316832)
chr4 (286-399)||(45688743-45688855)
chr4 (286-398)||(31754938-31755049)
chr4 (283-391)||(33951697-33951804)
chr4 (287-391)||(30475426-30475529)
chr4 (286-399)||(26831783-26831894)
chr4 (286-386)||(20811263-20811362)
chr4 (287-399)||(31168135-31168246)
chr4 (286-374)||(19328950-19329037)
chr4 (286-392)||(50514618-50514722)
chr4 (286-366)||(47188695-47188774)
chr4 (294-398)||(54339121-54339223)
chr4 (331-393)||(19876186-19876248)
chr4 (287-380)||(52341602-52341694)
chr4 (287-399)||(35675187-35675298)
chr4 (287-395)||(29462802-29462909)
chr4 (286-398)||(40436081-40436192)
chr4 (331-399)||(51290474-51290542)
chr4 (286-398)||(53566948-53567062)
chr4 (332-398)||(46695960-46696026)
chr4 (288-393)||(13498120-13498224)
chr4 (331-398)||(9693380-9693446)
chr4 (308-399)||(31487743-31487833)
chr4 (311-392)||(35511184-35511264)
chr4 (289-380)||(3769816-3769906)
chr4 (287-368)||(45088071-45088148)
chr4 (286-332)||(9693534-9693580)
chr4 (291-395)||(30617954-30618057)
chr4 (311-379)||(52895749-52895816)
chr4 (287-370)||(15986267-15986349)
chr4 (349-399)||(16559991-16560041)
chr4 (286-388)||(20456569-20456670)
chr4 (290-376)||(35927294-35927379)
chr4 (301-379)||(36486703-36486780)
chr4 (301-379)||(55120106-55120183)
chr4 (366-395)||(19328748-19328777)
chr4 (291-392)||(48513624-48513724)
[»] chr1 (47 HSPs)
chr1 (286-399)||(34874567-34874679)
chr1 (286-399)||(932151-932263)
chr1 (286-399)||(22346231-22346343)
chr1 (286-399)||(41147472-41147584)
chr1 (286-391)||(42607326-42607430)
chr1 (287-399)||(27209715-27209826)
chr1 (294-393)||(11385810-11385908)
chr1 (286-399)||(49508728-49508839)
chr1 (283-391)||(6170553-6170660)
chr1 (287-399)||(43433776-43433887)
chr1 (286-398)||(49901926-49902037)
chr1 (290-398)||(50295428-50295535)
chr1 (286-392)||(47655372-47655477)
chr1 (286-399)||(11385981-11386093)
chr1 (286-399)||(29966822-29966935)
chr1 (286-391)||(33929966-33930070)
chr1 (283-399)||(2125701-2125816)
chr1 (286-398)||(24140773-24140883)
chr1 (286-393)||(4940740-4940846)
chr1 (293-399)||(32213883-32213988)
chr1 (288-392)||(40845253-40845356)
chr1 (286-394)||(52396443-52396549)
chr1 (286-399)||(7190469-7190581)
chr1 (290-399)||(28850904-28851011)
chr1 (287-391)||(26469584-26469687)
chr1 (283-391)||(28277484-28277591)
chr1 (283-379)||(50154470-50154565)
chr1 (283-399)||(44286869-44286984)
chr1 (307-399)||(45721773-45721864)
chr1 (283-366)||(47895331-47895413)
chr1 (290-392)||(4656020-4656121)
chr1 (313-399)||(5945447-5945532)
chr1 (301-399)||(14331852-14331949)
chr1 (301-399)||(16691309-16691406)
chr1 (301-395)||(17402963-17403056)
chr1 (283-391)||(31975484-31975591)
chr1 (301-379)||(48938651-48938727)
chr1 (349-399)||(8244150-8244200)
chr1 (301-395)||(43168156-43168249)
chr1 (290-363)||(30222624-30222697)
chr1 (301-399)||(44359666-44359763)
chr1 (290-392)||(40920189-40920292)
chr1 (289-394)||(41492912-41493015)
chr1 (301-374)||(41898878-41898950)
chr1 (311-379)||(8892785-8892852)
chr1 (311-385)||(27210750-27210823)
chr1 (359-393)||(30222991-30223025)
[»] chr2 (38 HSPs)
chr2 (286-397)||(6999202-6999312)
chr2 (287-399)||(765147-765258)
chr2 (290-392)||(2966544-2966645)
chr2 (286-395)||(862589-862697)
chr2 (286-399)||(39401532-39401643)
chr2 (283-399)||(16361563-16361678)
chr2 (286-399)||(17603811-17603923)
chr2 (286-399)||(33726380-33726492)
chr2 (286-399)||(39085789-39085901)
chr2 (286-391)||(41436478-41436582)
chr2 (287-399)||(27495124-27495235)
chr2 (283-392)||(17118377-17118484)
chr2 (286-399)||(1321168-1321280)
chr2 (286-395)||(35445291-35445400)
chr2 (283-392)||(9201499-9201606)
chr2 (290-395)||(17095068-17095171)
chr2 (283-392)||(33864352-33864460)
chr2 (287-379)||(44173120-44173211)
chr2 (294-398)||(44299679-44299782)
chr2 (277-387)||(13997913-13998022)
chr2 (290-395)||(17056059-17056162)
chr2 (290-395)||(17068506-17068609)
chr2 (283-387)||(464792-464896)
chr2 (290-395)||(17074489-17074592)
chr2 (283-360)||(23685688-23685764)
chr2 (283-332)||(11445382-11445431)
chr2 (286-390)||(34334167-34334270)
chr2 (290-392)||(2239586-2239687)
chr2 (299-391)||(43140328-43140419)
chr2 (286-347)||(15004927-15004987)
chr2 (331-374)||(11445313-11445356)
chr2 (301-392)||(34220650-34220740)
chr2 (287-392)||(2805382-2805488)
chr2 (301-399)||(11659277-11659374)
chr2 (346-399)||(12695233-12695286)
chr2 (331-395)||(1729528-1729592)
chr2 (342-378)||(34316342-34316378)
chr2 (334-378)||(37230267-37230311)
[»] chr7 (38 HSPs)
chr7 (286-399)||(43567503-43567615)
chr7 (286-399)||(29034687-29034799)
chr7 (286-399)||(5240329-5240441)
chr7 (290-399)||(40763253-40763361)
chr7 (283-392)||(42222218-42222326)
chr7 (287-399)||(8380442-8380553)
chr7 (283-392)||(43958087-43958195)
chr7 (286-398)||(8292745-8292856)
chr7 (287-395)||(27053494-27053601)
chr7 (286-391)||(7322958-7323062)
chr7 (286-395)||(22521586-22521694)
chr7 (286-391)||(24359713-24359817)
chr7 (286-398)||(22707049-22707159)
chr7 (283-398)||(49069552-49069666)
chr7 (283-399)||(30538477-30538589)
chr7 (287-397)||(41188785-41188894)
chr7 (290-398)||(40066915-40067021)
chr7 (291-390)||(3681699-3681797)
chr7 (286-395)||(1910244-1910351)
chr7 (310-399)||(48454819-48454907)
chr7 (286-381)||(40194826-40194920)
chr7 (306-399)||(36279139-36279231)
chr7 (283-392)||(46478560-46478667)
chr7 (287-399)||(8258640-8258746)
chr7 (286-395)||(5347973-5348078)
chr7 (287-378)||(46042749-46042838)
chr7 (289-386)||(31626051-31626147)
chr7 (290-376)||(42291284-42291371)
chr7 (286-358)||(29687476-29687547)
chr7 (287-392)||(1907593-1907697)
chr7 (295-363)||(30388693-30388760)
chr7 (331-379)||(31360309-31360357)
chr7 (289-359)||(6548533-6548602)
chr7 (287-316)||(29959068-29959097)
chr7 (290-375)||(32204186-32204270)
chr7 (331-376)||(37869384-37869429)
chr7 (287-379)||(42552489-42552579)
chr7 (311-379)||(3720131-3720198)
[»] chr3 (37 HSPs)
chr3 (286-394)||(36730155-36730262)
chr3 (283-398)||(4759848-4759962)
chr3 (286-395)||(8715503-8715610)
chr3 (286-395)||(9067390-9067497)
chr3 (287-399)||(29915572-29915683)
chr3 (287-399)||(29964725-29964836)
chr3 (283-392)||(46317483-46317591)
chr3 (283-399)||(32415566-32415681)
chr3 (283-398)||(44695669-44695783)
chr3 (283-398)||(37509108-37509222)
chr3 (286-387)||(12905292-12905391)
chr3 (286-399)||(44570383-44570495)
chr3 (286-399)||(10854859-10854975)
chr3 (287-377)||(52570783-52570872)
chr3 (286-391)||(35306332-35306436)
chr3 (286-395)||(51817313-51817421)
chr3 (286-399)||(8847449-8847561)
chr3 (286-391)||(12051038-12051142)
chr3 (290-399)||(25102319-25102426)
chr3 (331-399)||(1803932-1804000)
chr3 (287-399)||(45899540-45899652)
chr3 (283-371)||(20227405-20227492)
chr3 (294-395)||(18788-18888)
chr3 (286-347)||(31647304-31647364)
chr3 (288-376)||(34060786-34060873)
chr3 (359-399)||(41346346-41346386)
chr3 (343-399)||(48136720-48136776)
chr3 (288-362)||(41345977-41346050)
chr3 (293-381)||(11675320-11675405)
chr3 (314-385)||(39436493-39436563)
chr3 (294-378)||(18946-19029)
chr3 (304-380)||(49976157-49976232)
chr3 (290-369)||(11316970-11317048)
chr3 (301-398)||(12060057-12060153)
chr3 (344-409)||(44019107-44019172)
chr3 (301-398)||(48313836-48313932)
chr3 (291-375)||(21324521-21324603)
[»] chr8 (33 HSPs)
chr8 (286-399)||(19389307-19389419)
chr8 (286-398)||(21016234-21016345)
chr8 (286-392)||(25249345-25249450)
chr8 (287-387)||(18068963-18069062)
chr8 (287-395)||(45338005-45338112)
chr8 (283-397)||(6939155-6939268)
chr8 (290-392)||(8018765-8018866)
chr8 (286-393)||(4989936-4990039)
chr8 (286-390)||(21016063-21016166)
chr8 (286-386)||(26195383-26195482)
chr8 (295-391)||(26672799-26672894)
chr8 (290-391)||(10694811-10694911)
chr8 (286-395)||(3174456-3174568)
chr8 (286-391)||(34713924-34714030)
chr8 (286-386)||(14855394-14855493)
chr8 (287-391)||(37433267-37433369)
chr8 (306-393)||(5129459-5129545)
chr8 (331-395)||(7532829-7532893)
chr8 (304-379)||(31596438-31596512)
chr8 (299-385)||(26892799-26892884)
chr8 (331-393)||(44874369-44874431)
chr8 (318-399)||(35930168-35930248)
chr8 (290-378)||(6433548-6433635)
chr8 (283-347)||(33741523-33741586)
chr8 (304-392)||(25636694-25636780)
chr8 (301-375)||(25690855-25690929)
chr8 (301-394)||(11332796-11332888)
chr8 (342-398)||(19976488-19976545)
chr8 (301-379)||(34421335-34421412)
chr8 (287-332)||(30351592-30351637)
chr8 (337-385)||(6841707-6841755)
chr8 (287-371)||(39972177-39972260)
chr8 (295-323)||(41689098-41689126)
[»] chr6 (21 HSPs)
chr6 (286-398)||(6866915-6867026)
chr6 (286-398)||(12191493-12191604)
chr6 (297-399)||(10855443-10855544)
chr6 (286-399)||(5578274-5578386)
chr6 (286-376)||(7875201-7875290)
chr6 (309-399)||(29692338-29692427)
chr6 (283-399)||(8324101-8324216)
chr6 (286-399)||(26572079-26572186)
chr6 (286-394)||(16437592-16437691)
chr6 (283-398)||(7274212-7274326)
chr6 (289-395)||(28014638-28014743)
chr6 (286-376)||(7880447-7880536)
chr6 (286-330)||(32786069-32786113)
chr6 (301-379)||(27127524-27127601)
chr6 (287-380)||(12175561-12175652)
chr6 (331-399)||(32786260-32786327)
chr6 (287-398)||(31220325-31220435)
chr6 (337-377)||(12769254-12769294)
chr6 (304-379)||(20775010-20775084)
chr6 (310-391)||(22414598-22414676)
chr6 (310-378)||(12402842-12402909)
[»] scaffold0062 (3 HSPs)
scaffold0062 (286-395)||(16773-16880)
scaffold0062 (286-395)||(26941-27048)
scaffold0062 (286-395)||(37107-37214)
[»] scaffold0002 (1 HSPs)
scaffold0002 (286-366)||(392162-392241)
[»] scaffold0809 (2 HSPs)
scaffold0809 (331-398)||(4268-4335)
scaffold0809 (286-332)||(4709-4755)
[»] scaffold0144 (1 HSPs)
scaffold0144 (313-379)||(39614-39679)
[»] scaffold0050 (2 HSPs)
scaffold0050 (344-392)||(37393-37441)
scaffold0050 (291-347)||(37428-37483)


Alignment Details
Target: chr5 (Bit Score: 158; Significance: 7e-84; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 255 - 464
Target Start/End: Original strand, 1759786 - 1759994
Alignment:
Q  255 agtcacactattttgttaagggtcttgctaacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccatttt 354  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||||||||||||||||| |||| ||||||| ||||| |||||||    
T  1759786 agtcacactattttgttaagtgtcttgctaacacatttgcattggttttaacaacattttgacttttaaaaagttaaa-tttatcacttttctccatttt 1759884  T
Q  355 ccaatactatatttctatttttatccccttatccaatgccccaagcattcaccttttgttaaatataaagaagaaaacagaagcaacagagagcggaaga 454  Q
     ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1759885 tcaatactatatttctatttttatcctcttatccaatgccccaagcattctccttttgttaaatataaagaagaaaacaaaagcaacagagagcggaaga 1759984  T
Q  455 ggaagagagt 464  Q
    ||||||||||    
T  1759985 ggaagagagt 1759994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 1759535 - 1759708
Alignment:
Q  4 tatttctataattcttctctgattatctagcattgcagaatgaccaaaattttcatctttaataagagcccttctaggactgcagggtcattttcagact 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1759535 tatttctataattcttctctgattatctagcattgcagaatgaccaaaattttcatctttaataagagcccttctaggactgcagggtcattttcagact 1759634  T
Q  104 taatcccatacttcaaacttcnnnnnnnattacaccaaccgataatataagttgaattttaaaacacacaattg 177  Q
    ||| |||||||||||||||||       ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  1759635 taagcccatacttcaaacttctttttttattacaccaactgataatataagttaaattttaaaacacacaattg 1759708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 35653364 - 35653252
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||||||||||| ||| |||||| |||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  35653364 catgtttgcattggtttcaacaacattttgattttcaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttctatttttatcccctta 35653266  T
Q  386 tccaatgccccaag 399  Q
    |||||||| |||||    
T  35653265 tccaatgcaccaag 35653252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 283 - 388
Target Start/End: Complemental strand, 43414176 - 43414072
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||    
T  43414176 taacatgtttgcattggtttcaacaacattttgatttttaaaaagttaaa-ttgatcatttttcaccattttccaatgctatatttctatttttatcccc 43414078  T
Q  383 ttatcc 388  Q
    ||||||    
T  43414077 ttatcc 43414072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 25017400 - 25017288
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||| |||||||||||| | |||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  25017400 catgtttgtattggtttcaacgatattttgacttttaaaaagttaaa-tttatcacttttcacaattttccaatactatatttctatttttatcccctta 25017302  T
Q  386 tccaatgccccaag 399  Q
    ||||||||| ||||    
T  25017301 tccaatgcctcaag 25017288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 286 - 394
Target Start/End: Original strand, 5151489 - 5151596
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  5151489 catgtttgcattagtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcatcattttccaatgttatatttctatttttatcccctta 5151587  T
Q  386 tccaatgcc 394  Q
    || ||||||    
T  5151588 tcaaatgcc 5151596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 16315639 - 16315535
Alignment:
Q  288 tgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatc 387  Q
    ||||||||||||||||||||||||||||||| |||||||| ||   ||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  16315639 tgtttgcattggtttcaacaacattttgactattaaaaagtta---tttatcacttttcaccattttccaatgctatatttctatttttatccccttatc 16315543  T
Q  388 caatgccc 395  Q
    | ||||||    
T  16315542 cgatgccc 16315535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 39567903 - 39568015
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||  |||||| |||||||||| |||| |||||||||||||| ||||||||||| |||||||| |||||||||||| |||    
T  39567903 catgtttgcattggtttcaacaatgttttgatttttaaaaagttaaa-tttatcatttttcatcattttccaatgctatatttatatttttatcccatta 39568001  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  39568002 tccaatgccccaag 39568015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 4422076 - 4421965
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||||||||  |||||||||||||||| || ||||||| |||| ||||||| |||||||||||||||||| |||||||||||||||||||| |    
T  4422076 taacatgtttgcattgacttcaacaacattttgatttgtaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttctatttttatcctc 4421978  T
Q  383 ttatccaatgccc 395  Q
    |||||||||||||    
T  4421977 ttatccaatgccc 4421965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 8410142 - 8410253
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||| |||||||| || ||||||||||||||||||||| |||| |||||||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  8410142 catgtttgtattggttttaataacattttgacttttaaaaagttaaa-tttatcattttttaccattttctaatactatatttttatttttatcccctta 8410240  T
Q  386 tccaatgccccaa 398  Q
    || ||| ||||||    
T  8410241 tctaataccccaa 8410253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 12068283 - 12068178
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||| |||||| |||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||  ||| |    
T  12068283 catgtttgtattggtgtcaataacattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatatcctca 12068185  T
Q  386 tccaatg 392  Q
    |||||||    
T  12068184 tccaatg 12068178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 290 - 391
Target Start/End: Original strand, 34546782 - 34546882
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    |||||||| |||||||||||||||| ||||||||||| || |||||||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  34546782 tttgcattagtttcaacaacattttaacttttaaaaa-attaaatttatcacttttcaccatttttcaatgttatatttctatttttatccccttatcca 34546880  T
Q  390 at 391  Q
    ||    
T  34546881 at 34546882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 393
Target Start/End: Original strand, 27823279 - 27823365
Alignment:
Q  306 caacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 393  Q
    ||||||||| | |||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27823279 caacattttaatttttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatccccttatccaatgc 27823365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 3639182 - 3639079
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||||||||||||||||||| |||| |||||||||||| || |||||||||| | ||||||||||||||||  |||||||||||||||||||||||||    
T  3639182 atgtttgcattggtttcaacaatattt-gacttttaaaaa-attaaatttatcactcttcaccattttccaatgttatatttctatttttatccccttat 3639085  T
Q  387 ccaatg 392  Q
     |||||    
T  3639084 tcaatg 3639079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 28143232 - 28143120
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||| ||| |||||||||||||||||| |||||||||| |||| ||||| |||||||||||||| |||||  |||||||||||||||||| |||||    
T  28143232 catgtttgtattagtttcaacaacattttgatttttaaaaagttaaa-tttattatttttcaccatttcccaatgttatatttctatttttatctcctta 28143134  T
Q  386 tccaatgccccaag 399  Q
    | ||||| ||||||    
T  28143133 ttcaatgtcccaag 28143120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 35945250 - 35945358
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    |||||||| |||||||||||||||| || ||||||||| |||| ||||||| ||||||| ||||||||||  ||||||||||||||||| ||||||||||    
T  35945250 tttgcattagtttcaacaacattttaacatttaaaaagttaaa-tttatcacttttcactattttccaatgttatatttctatttttattcccttatcca 35945348  T
Q  390 atgccccaag 399  Q
    || |||||||    
T  35945349 ataccccaag 35945358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 295 - 399
Target Start/End: Complemental strand, 1479236 - 1479133
Alignment:
Q  295 attggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgcc 394  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||  ||||| |||| |||||||||||||||||||||||||| |||||||    
T  1479236 attggtttcaataacattttgacttttaaaaagttaaa-tttatcacttttcattatttttcaatgctatatttctatttttatccccttattcaatgcc 1479138  T
Q  395 ccaag 399  Q
     ||||    
T  1479137 tcaag 1479133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 13951345 - 13951258
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattt 374  Q
    |||| |||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| |||| ||||||||||||||    
T  13951345 catgcttgcattggtttcaacaacattttgacttttaaaaaaat-aaatttatcacttttcaccatttttcaatgctatatttctattt 13951258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 338873 - 338761
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||| |||||||||| ||||||| |||||||||| |||| ||||||| |||| | |||||| |||||  |||||| |||||||||||| |||    
T  338873 catgtttgcatttgtttcaacaatattttgatttttaaaaagttaaa-tttatcactttttatcatttttcaatatcatatttttatttttatcccttta 338775  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  338774 tccaatgccccaag 338761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 4962625 - 4962514
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||| ||| |||||||||||||||||||||| |||||| |||| ||||||| |||||| |||||||||||  |||||||||||||||||  |||||    
T  4962625 catgtttgtattagtttcaacaacattttgactttaaaaaagttaaa-tttatcacttttcatcattttccaatgttatatttctatttttat-tcctta 4962528  T
Q  386 tccaatgccccaag 399  Q
    ||||||| ||||||    
T  4962527 tccaatgtcccaag 4962514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 384
Target Start/End: Complemental strand, 25568404 - 25568304
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| | |||| ||||| |||||| |||||| |||| |||||||| |||||||||||||    
T  25568404 taacatgtttgcattggtttcaataacattttgatttttaaaaag-ttaaatgtatcacttttcatcatttttcaatgctatatttatatttttatcccc 25568306  T
Q  383 tt 384  Q
    ||    
T  25568305 tt 25568304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 331 - 399
Target Start/End: Original strand, 15915876 - 15915944
Alignment:
Q  331 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  15915876 aaatttatcacttttcaccattttccaatgctatatttctatttttattcccttatccaatgccccaag 15915944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 37243852 - 37243958
Alignment:
Q  291 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaa 390  Q
    |||||||| ||||||||||||||| | |||||||||| |||| ||||||| ||||||||||||||||||| ||||||| ||||||||| || ||||||||    
T  37243852 ttgcattgatttcaacaacattttaatttttaaaaagttaaa-tttatcacttttcaccattttccaatattatatttttatttttat-cctttatccaa 37243949  T
Q  391 tgccccaag 399  Q
    |||| ||||    
T  37243950 tgcctcaag 37243958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 10017727 - 10017626
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||||||||||||| ||||||||||| |||||||||||| |   |||||||| ||||||||| |||||| |||||||||||||||||||||| |||||    
T  10017727 atgtttgcattggttttaacaacattttaacttttaaaaagtt---atttatcaattttcacca-tttccagtactatatttctatttttatcctcttat 10017632  T
Q  387 ccaatg 392  Q
    | ||||    
T  10017631 caaatg 10017626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 12914176 - 12914261
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatt 373  Q
    |||||||||||||||||||||| ||||||| ||||||||| || |||||||||| ||||||||||||| |||| |||||||||||||    
T  12914176 atgtttgcattggtttcaacaatattttgatttttaaaaa-attaaatttatcacttttcaccatttttcaatgctatatttctatt 12914261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 290 - 375
Target Start/End: Complemental strand, 6823858 - 6823773
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttt 375  Q
    |||||||||| |||||||| ||||| |||||||||||| |||||||||| | ||| |||| |||||| |||| |||||||||||||    
T  6823858 tttgcattggattcaacaatattttaacttttaaaaagttaaaatttattactttccaccgttttccgatacaatatttctatttt 6823773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 27535098 - 27535202
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    ||||||||||||| |||||||   |||| |||||||||||  ||||||| |||| ||||||||||||| |||||| |||||| |||||||||||  ||||    
T  27535098 atgtttgcattggattcaaca---ttttaacttttaaaaacttaaaattcatcacttttcaccatttttcaatacaatatttatatttttatccttttat 27535194  T
Q  387 ccaatgcc 394  Q
     |||||||    
T  27535195 tcaatgcc 27535202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 367
Target Start/End: Original strand, 39693007 - 39693090
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatt 367  Q
    ||||||||||| |||| ||||||||| ||||| |||||||||||||| ||||||||||||||| |||| ||| |||| |||||||    
T  39693007 taacatgtttgtattgatttcaacaatattttaacttttaaaaagat-aaatttatcattttttaccacttttcaatgctatatt 39693090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 373
Target Start/End: Original strand, 10406785 - 10406873
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatt 373  Q
    |||||| |||||||||| |||||||| ||||||| ||| |||||  | |||||||||| ||||| ||||||| |||||| |||||||||||    
T  10406785 taacatttttgcattggattcaacaatattttgaatttaaaaaa--ttaaatttatcacttttctccatttttcaatacaatatttctatt 10406873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 283 - 329
Target Start/End: Original strand, 4838278 - 4838324
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagat 329  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  4838278 taacatgtttgcattagtttcaacaatattttgacttttaaaaagat 4838324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 368
Target Start/End: Complemental strand, 16899680 - 16899599
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatattt 368  Q
    ||||||| ||||| ||||||||||||||||||||||||||| ||||||| || | |||||| | ||| |||| || ||||||    
T  16899680 atgtttgtattggattcaacaacattttgacttttaaaaagttaaaattcattacttttcatcctttcccaacacaatattt 16899599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 379
Target Start/End: Complemental strand, 3015144 - 3015067
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    |||||||| ||||| |||||||||||| |||| || |||||||| ||| |||||| || || |||||||||||||||||    
T  3015144 ttcaacaatattttaacttttaaaaagttaaa-ttaatcattttacactattttctaacacaatatttctatttttatc 3015067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 39335474 - 39335519
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaa 332  Q
    ||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  39335474 atgtttgtattggattcaacaacattttgacttttaaaaagttaaa 39335519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 28599759 - 28599677
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatt 373  Q
    |||||||||  ||||| ||  |||| |||||||||||| | |||||||||||||||||| |||||||||||  |||||| ||||    
T  28599759 tttgcattgaattcaataaatttttaacttttaaaaag-tcaaatttatcatttttcactattttccaatataatatttttatt 28599677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 381
Target Start/End: Complemental strand, 39042128 - 39042050
Alignment:
Q  302 tcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccc 381  Q
    ||||||||||||| ||||||||||| || ||||| | |||||||||  ||||| ||||  ||||||| ||||||||||||    
T  39042128 tcaacaacattttaacttttaaaaa-attaaattaaccatttttcattattttacaatgttatatttttatttttatccc 39042050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 399
Target Start/End: Original strand, 40099363 - 40099443
Alignment:
Q  318 ttttaaaaagataaaatttatcatttttcacca-ttttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    |||| ||||| | |||||||||| ||||||||| |||| |||| |||||||| ||||||  ||||||||||||||||| ||||    
T  40099363 tttttaaaaggttaaatttatcacttttcaccattttttcaatgctatatttttatttt--tccccttatccaatgccacaag 40099443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 399
Target Start/End: Complemental strand, 104976 - 104926
Alignment:
Q  349 cattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    ||||||| |||| ||||||||||||||||  |||||||||||| |||||||    
T  104976 cattttctaatattatatttctatttttactcccttatccaataccccaag 104926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 394
Target Start/End: Original strand, 17168691 - 17168783
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgcc 394  Q
    |||| ||| ||||| | |||||||||| | ||||| ||||||||||||| |||| |||| | |||||||||||| ||||  |||| ||||||||    
T  17168691 ttcagcaatattttaaattttaaaaag-tcaaattcatcatttttcaccgtttttcaatgcaatatttctatttgtatcttcttaaccaatgcc 17168783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 39069370 - 39069298
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattt 374  Q
    |||||||| |||||||||||||||| | | ||||| |||| ||||||| |||||||||||| || || ||||||    
T  39069370 ttcaacaatattttgacttttaaaatg-ttaaattcatcacttttcacaattttccaatacaatgttcctattt 39069298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 379
Target Start/End: Original strand, 39167650 - 39167687
Alignment:
Q  342 ttttcaccattttccaatactatatttctatttttatc 379  Q
    |||||||||||||||||||| || ||||||||||||||    
T  39167650 ttttcaccattttccaatacaatgtttctatttttatc 39167687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 393
Target Start/End: Original strand, 678465 - 678556
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 393  Q
    ||||||||  |||| |||||||||| | |||| || || | |||||||||||||||||||| | | |||||||||| ||| |||| |||||||    
T  678465 ttcaacaattttttaacttttaaaaggttaaa-ttcattacttttcaccattttccaatacaacaattctatttttgtcctcttaaccaatgc 678556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 1e-45; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 35808505 - 35808393
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  35808505 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcacaattttccaatgctatatttctatttttatcccctta 35808407  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  35808406 tccaatgccccaag 35808393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 55669739 - 55669851
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  55669739 catgtttgcattgtttttaacaacattttgacttttaaaaagttaaa-tttatcatttttcaccattttccaatgctatatttctatttttatcccctta 55669837  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  55669838 tccaatgccccaag 55669851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 2362630 - 2362743
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaaga-taaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||| ||||||||||||||||||||||| | | |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  2362630 atgtttgcattggttttaacaacattttgacttttaaaaaaaattaaatttatcacttttcaccattttccaatactatatttttatttttatcccctta 2362729  T
Q  386 tccaatgccccaag 399  Q
    ||| ||||||||||    
T  2362730 tccgatgccccaag 2362743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 26040465 - 26040357
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    |||||||||| |||||||| |||||||||||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26040465 tttgcattggcttcaacaatattttgacttttaaaaagttaaactt-atcacttttcaccattttccaatactatatttctatttttatccccttatcca 26040367  T
Q  390 atgccccaag 399  Q
    ||||||||||    
T  26040366 atgccccaag 26040357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 32131139 - 32131247
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| || ||||||||||||||||||||||||||||||||||| |     
T  32131139 taacatgtttgcattggtttcaacaacatcttgacttttaaaaagttaaa-tttatcacttatcaccattttccaatactatatttctatttttatctct 32131237  T
Q  383 ttatccaatg 392  Q
    ||||||||||    
T  32131238 ttatccaatg 32131247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 34016626 - 34016730
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  34016626 atgtttgcattgatttcaacaacattttgacttttaaaaagttaaa-ttcatcacttttcaccattttccaatgctatatttctatttttatccccttat 34016724  T
Q  387 ccaatg 392  Q
    ||||||    
T  34016725 ccaatg 34016730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 41956322 - 41956210
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||  ||||||||||||||||||| ||||    
T  41956322 catgtttgcattggcttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcatcattttccaatgttatatttctatttttatcctctta 41956224  T
Q  386 tccaatgccccaag 399  Q
    ||| ||||||||||    
T  41956223 tccgatgccccaag 41956210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 283 - 399
Target Start/End: Complemental strand, 10100225 - 10100110
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| | |||||||||||||| |||| ||||||| |||||||||||||    
T  10100225 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttataacttttcaccattttctaatattatatttatatttttatcccc 10100127  T
Q  383 ttatccaatgccccaag 399  Q
    |||||| ||| ||||||    
T  10100126 ttatccgatgtcccaag 10100110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 23765578 - 23765689
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| |||||||||||||||||| ||||||||| |||||||||||||||    
T  23765578 catgtttgcattggtttcaacaacattttgatttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttcaatttttatcccctta 23765676  T
Q  386 tccaatgccccaa 398  Q
    || ||||| ||||    
T  23765677 tctaatgcaccaa 23765689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 51266924 - 51267029
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||| |||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  51266924 catgtttgtattgatttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatctcctta 51267022  T
Q  386 tccaatg 392  Q
    |||||||    
T  51267023 tccaatg 51267029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 27839415 - 27839303
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||| || ||||||||||||||||||||  |||| |||||||||||||| |||||| |||| |||||||||||||||||| ||||||    
T  27839415 catgtttgcattggttttaataacattttgacttttaaaaacttaaa-tttatcatttttcatcatttttcaatgctatatttctatttttattccctta 27839317  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  27839316 tccaatgccccaag 27839303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 34316832 - 34316719
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| ||||| ||||  ||||||| |||||||||| |||||    
T  34316832 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaattttatcacttttcactatttttcaatgttatatttatatttttatctcctta 34316733  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  34316732 tccaatgccccaag 34316719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 45688743 - 45688855
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||| |||||| |||| |||| ||||||||||||||||||||    
T  45688743 catgtttgcattagtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcatcatttttcaatgctatgtttctatttttatcccctta 45688841  T
Q  386 tccaatgccccaag 399  Q
    |||||| |||||||    
T  45688842 tccaataccccaag 45688855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 31754938 - 31755049
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||| |||||| |||||| |||| |||||||| ||||||||||||||||    
T  31754938 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcatcatttttcaattctatatttatatttttatcccctta 31755036  T
Q  386 tccaatgccccaa 398  Q
    |||||| ||||||    
T  31755037 tccaataccccaa 31755049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 283 - 391
Target Start/End: Original strand, 33951697 - 33951804
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||| |||||||||||||||||||| | |||||||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  33951697 taacatgtttgtattggtttcaacaacattttaatttttaaaaagttaaa-tttatcacttttcacaattttccaatactatatttctatttttatcccc 33951795  T
Q  383 ttatccaat 391  Q
    |||| ||||    
T  33951796 ttattcaat 33951804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 30475426 - 30475529
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||| ||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||    
T  30475426 atgtttgcattggtttcaacaatattttgacatttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttttatttttatctccttat 30475524  T
Q  387 ccaat 391  Q
    |||||    
T  30475525 ccaat 30475529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 26831894 - 26831783
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||| ||||||||||||||| | ||||||||||||||| ||||||| |||| |||||||| ||||| ||||||||||||||||||| ||||    
T  26831894 catgtttgcattg-tttcaacaacattttaatttttaaaaagataaa-tttatcactttttaccattttacaatattatatttctatttttatcctctta 26831797  T
Q  386 tccaatgccccaag 399  Q
    | ||||||||||||    
T  26831796 ttcaatgccccaag 26831783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 386
Target Start/End: Original strand, 20811263 - 20811362
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||| ||||||||| ||||||||  ||||||||||||||||||||||||    
T  20811263 catgtttgcattgattttaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccaatttccaatgttatatttctatttttatcccctta 20811361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 31168135 - 31168246
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||| ||||||||||||||||||||||||||| ||||| || |||||||||| |||||||||||||||||| ||| | |||||||||||||||||| |    
T  31168135 atgtttacattggtttcaacaacattttgactttaaaaaa-attaaatttatcacttttcaccattttccaatgctaaaattctatttttatccccttgt 31168233  T
Q  387 ccaatgccccaag 399  Q
    | ||||| |||||    
T  31168234 ctaatgctccaag 31168246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 19329037 - 19328950
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattt 374  Q
    ||||||||||||||||||||||| |||||||||||||||||| | ||||||||||  ||||||||||||||||| ||||||||||||||    
T  19329037 catgtttgcattggtttcaacaatattttgacttttaaaaag-ttaaatttatcacatttcaccattttccaatgctatatttctattt 19328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 50514722 - 50514618
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||||||||| |||||||||||| | |||||||||| |||| |||||||| ||||  |||||||||| |||||||| ||||    
T  50514722 catgtttgcattggtttcaacaacattttaacttttaaaaag-ttaaatttatcactttttaccatttttcaatgttatatttcta-ttttatcctctta 50514625  T
Q  386 tccaatg 392  Q
    |||||||    
T  50514624 tccaatg 50514618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 47188774 - 47188695
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatat 366  Q
    |||||||||||||||||||||||||||||||||||| | ||| | |||||||||| |||||||||||||||||||||||||    
T  47188774 catgtttgcattggtttcaacaacattttgactttttagaag-ttaaatttatcacttttcaccattttccaatactatat 47188695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 398
Target Start/End: Original strand, 54339121 - 54339223
Alignment:
Q  294 cattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 393  Q
    |||||||||||| || ||||||||||||||||| || |||||||||||||| ||||||||| ||||  ||||||| |||||||||||| |||||||||||    
T  54339121 cattggtttcaaaaatattttgacttttaaaaa-attaaatttatcatttt-caccatttttcaatgttatatttatatttttatccctttatccaatgc 54339218  T
Q  394 cccaa 398  Q
    |||||    
T  54339219 cccaa 54339223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 331 - 393
Target Start/End: Complemental strand, 19876248 - 19876186
Alignment:
Q  331 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 393  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19876248 aaatttatcacttttcactattttccaatactatatttctatttttatccccttatccaatgc 19876186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 287 - 380
Target Start/End: Original strand, 52341602 - 52341694
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcc 380  Q
    ||||||||||||| ||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||| |  |||||||||||| |||||    
T  52341602 atgtttgcattggattcaacaacattttgacttttaaaaag-ttaaattcatcatttttcatcattttccaacataatatttctatttgtatcc 52341694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 35675298 - 35675187
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    ||||||||||||  |||||||| ||||| |||||||||||| |||| || |||| ||||||| |||| ||||||| |||||||||||||||||  ||||     
T  35675298 atgtttgcattgaattcaacaatattttaacttttaaaaagttaaa-ttcatcacttttcactatttcccaatacaatatttctatttttatcgtcttaa 35675200  T
Q  387 ccaatgccccaag 399  Q
    |||||||||||||    
T  35675199 ccaatgccccaag 35675187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 29462802 - 29462909
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||| |||||| |||||||||||||||||||| ||||| ||||||||  |||||||||| |||||| |||||  |||||| ||||||||||| ||||     
T  29462802 atgtttacattggattcaacaacattttgactttgaaaaa-ataaaattcctcatttttcatcatttttcaatataatatttttatttttatcctcttaa 29462900  T
Q  387 ccaatgccc 395  Q
     ||||||||    
T  29462901 acaatgccc 29462909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 40436081 - 40436192
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||| ||||||||||||| |||||||  ||||||||| |||| ||||| |||||||| ||||||  ||| |||| |||  |||||||||||||||    
T  40436081 catgtttgctttggtttcaacaatattttgatatttaaaaagttaaa-tttattatttttcatcattttttaatgctattttttcatttttatcccctta 40436179  T
Q  386 tccaatgccccaa 398  Q
    ||||||| |||||    
T  40436180 tccaatgtcccaa 40436192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 331 - 399
Target Start/End: Original strand, 51290474 - 51290542
Alignment:
Q  331 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    |||||||||| |||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  51290474 aaatttatcacttttcatcattttccaatgctatatttctaattttatccccttatccaatgtcccaag 51290542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 398
Target Start/End: Complemental strand, 53567062 - 53566948
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaat--ttatcatttttcaccattttccaatactatatttctatttttatcccct 383  Q
    |||||||||||  |||||||||||||||| |||||||||||| |||| |  |||  | |||| || ||||| |||| ||||||||||||||||||| | |    
T  53567062 catgtttgcatgagtttcaacaacattttaacttttaaaaagttaaatttattagtactttttactatttttcaatgctatatttctatttttatctctt 53566963  T
Q  384 tatccaatgccccaa 398  Q
    || ||||||||||||    
T  53566962 taaccaatgccccaa 53566948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 398
Target Start/End: Complemental strand, 46696026 - 46695960
Alignment:
Q  332 aatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaa 398  Q
    ||||||||| ||||||||||||| |||| |||||||| ||||||||||| |||||||||| ||||||    
T  46696026 aatttatcacttttcaccatttttcaatcctatatttttatttttatccacttatccaataccccaa 46695960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 393
Target Start/End: Complemental strand, 13498224 - 13498120
Alignment:
Q  288 tgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatc 387  Q
    ||||| |||||| ||||||||  ||||||||||||||||| |||| || ||| || || || |||||||||||| |||||||||||||||||  |||| |    
T  13498224 tgtttacattggattcaacaaagttttgacttttaaaaagttaaa-ttcatcgttctttactattttccaatacaatatttctatttttatcatcttaac 13498126  T
Q  388 caatgc 393  Q
    ||||||    
T  13498125 caatgc 13498120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 398
Target Start/End: Complemental strand, 9693446 - 9693380
Alignment:
Q  331 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaa 398  Q
    ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||| ||||    
T  9693446 aaatttatcatttttcacctttttc-aatattatatctttatttttatccccttatccaatgcgccaa 9693380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 399
Target Start/End: Original strand, 31487743 - 31487833
Alignment:
Q  308 acattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    |||||||||  ||||||||| | |||||||||| |||| || ||||| |||| |||||||| ||||||||||||||||| |||||| |||||    
T  31487743 acattttgatctttaaaaag-tcaaatttatcacttttaactatttttcaatgctatatttttatttttatccccttattcaatgctccaag 31487833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 392
Target Start/End: Complemental strand, 35511264 - 35511184
Alignment:
Q  311 ttttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatg 392  Q
    |||| |||||||||||| | ||||| |||| |||||||||||||||||||| ||||||||||||| |||  |||| ||||||    
T  35511264 ttttaacttttaaaaag-tcaaattcatcacttttcaccattttccaatacaatatttctattttcatctacttaaccaatg 35511184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 380
Target Start/End: Original strand, 3769816 - 3769906
Alignment:
Q  289 gtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcc 380  Q
    ||||||||||  || ||||| ||||| |||||||||||| | |||||||||| ||||||||||||| |||| | |||||||||  |||||||    
T  3769816 gtttgcattgaatttaacaatattttaacttttaaaaag-tcaaatttatcacttttcaccatttttcaatgcaatatttctaaatttatcc 3769906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 368
Target Start/End: Original strand, 45088071 - 45088148
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatattt 368  Q
    |||||||||||| ||||||||   |||||||||| ||||| || |||||||||| |||||| ||||||||||| ||||||||    
T  45088071 atgtttgcattgatttcaaca---ttttgactttcaaaaa-attaaatttatcacttttcatcattttccaatgctatattt 45088148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 9693580 - 9693534
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaa 332  Q
    ||||||||||||||||||||||| |||| ||||||||||||| ||||    
T  9693580 catgtttgcattggtttcaacaatatttcgacttttaaaaagttaaa 9693534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 395
Target Start/End: Original strand, 30617954 - 30618057
Alignment:
Q  291 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaa 390  Q
    ||||||||| |||||||| ||||  |||||||||||| | ||||| ||   |||||| ||||| ||||| | |||||||||| ||||||| |||| ||||    
T  30617954 ttgcattggattcaacaatatttgaacttttaaaaag-ttaaattcattgcttttcatcatttcccaatgcaatatttctatgtttatcctcttaaccaa 30618052  T
Q  391 tgccc 395  Q
    |||||    
T  30618053 tgccc 30618057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 52895749 - 52895816
Alignment:
Q  311 ttttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    ||||||||||||||||| |||||||| ||| ||||||| ||||  |||||| || ||||||||||||||    
T  52895749 ttttgacttttaaaaagttaaaattt-tcacttttcacaatttctcaatacaatgtttctatttttatc 52895816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 370
Target Start/End: Original strand, 15986267 - 15986349
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttct 370  Q
    ||||||||||||  |||||||| ||| |||||||||||||  | ||||| | || ||||||||||||| |||||| ||||||||    
T  15986267 atgtttgcattgaattcaacaatattctgacttttaaaaa-tttaaattcaccacttttcaccatttttcaatacaatatttct 15986349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 399
Target Start/End: Complemental strand, 16560041 - 16559991
Alignment:
Q  349 cattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    |||||||||| || | |||||||||||||| || |||||||||||||||||    
T  16560041 cattttccaacacaaaatttctatttttattcctttatccaatgccccaag 16559991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 388
Target Start/End: Original strand, 20456569 - 20456670
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||  |||||||| ||||| || ||||||||  |||| || || | |||||| |||||| |||||  | |||||||||||||||| ||||    
T  20456569 catgtttgcattgaattcaacaatattttaacatttaaaaatttaaa-ttcataacttttcatcatttttcaataaaacatttctatttttatcctctta 20456667  T
Q  386 tcc 388  Q
    |||    
T  20456668 tcc 20456670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 376
Target Start/End: Complemental strand, 35927379 - 35927294
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt 376  Q
    |||||||| | |||||||| ||||| |||||||||||| | ||||| ||| ||||||||||||||| ||| | | ||| ||||||||    
T  35927379 tttgcattagattcaacaatattttaacttttaaaaag-ttaaattcatcgtttttcaccattttctaatgcaaaattgctattttt 35927294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 379
Target Start/End: Complemental strand, 36486780 - 36486703
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    ||||| || ||||||||||||||||| || |||||  ||| |||||||||||||||||||  || ||| ||||||||||    
T  36486780 ttcaataatattttgacttttaaaaa-attaaattcttcacttttcaccattttccaatataatgtttatatttttatc 36486703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 379
Target Start/End: Original strand, 55120106 - 55120183
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    ||||||||  ||||||||||||||||| | |||||  ||||||||||| ||||| |||||| ||||||  |||||||||    
T  55120106 ttcaacaatgttttgacttttaaaaag-tcaaattcttcatttttcactatttttcaatacaatattttaatttttatc 55120183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 395
Target Start/End: Complemental strand, 19328777 - 19328748
Alignment:
Q  366 tttctatttttatccccttatccaatgccc 395  Q
    ||||||||||||||||||||||||||||||    
T  19328777 tttctatttttatccccttatccaatgccc 19328748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 392
Target Start/End: Original strand, 48513624 - 48513724
Alignment:
Q  291 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaa 390  Q
    ||||||||  ||||||||  ||||||||||||||||| | |||| | ||| |||||| |||||| |||||| || ||| ||||||||||  |||| ||||    
T  48513624 ttgcattgaattcaacaatgttttgacttttaaaaag-ttaaatctttcacttttcatcatttttcaatacaatgtttttatttttatcgtcttaaccaa 48513722  T
Q  391 tg 392  Q
    ||    
T  48513723 tg 48513724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 1e-45; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 34874567 - 34874679
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  34874567 catgtttgcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccattttccaatgctatatttctatttttatcccctta 34874665  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  34874666 tccaatgccccaag 34874679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 932263 - 932151
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  932263 catgtttgcattagtttcaacaacattttgacttttaaaaa-attaaatttataatttttcatcattttccaatgctatatttctatttttatcccctta 932165  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  932164 tccaatgccccaag 932151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 22346343 - 22346231
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||| ||||||||||||||||| || |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||    
T  22346343 catgtttgcattggtttcaacaatattttgacttttaaaaa-attaaatttatcacttttcaccatttttcaatactatatttctatttttattccctta 22346245  T
Q  386 tccaatgccccaag 399  Q
    ||||| ||||||||    
T  22346244 tccaaagccccaag 22346231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 41147584 - 41147472
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| || ||||||||| |||||||| |||| |||||||||||||||||||||||||    
T  41147584 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-ttaatcattttttaccatttttcaatgctatatttctatttttatcccctta 41147486  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  41147485 tccaatgccccaag 41147472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 42607430 - 42607326
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  42607430 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcaccatttttcaatgctatatttttatttttatcccctta 42607332  T
Q  386 tccaat 391  Q
    ||||||    
T  42607331 tccaat 42607326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 27209826 - 27209715
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||||||||||||||  |||||||||||||||||||| ||||    
T  27209826 atgtttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatcaattttcaccattttccaatgttatatttctatttttatccctttat 27209728  T
Q  387 ccaatgccccaag 399  Q
    |||||||||||||    
T  27209727 ccaatgccccaag 27209715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 294 - 393
Target Start/End: Complemental strand, 11385908 - 11385810
Alignment:
Q  294 cattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 393  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11385908 cattggtttcaacaacattttgacttttaaaaagttaaa-tttataacttttcaccattttccaatactatatttctatttttatccccttatccaatgc 11385810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 49508839 - 49508728
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||| |||| |||||||||||||||||| |||| ||||||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  49508839 catgtttgcattggtttcgacaatattttgacttttaaaaagttaaa-tttatcacttt-caccattttccaatgctatatttctatttttatcccctta 49508742  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  49508741 tccaatgccccaag 49508728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 283 - 391
Target Start/End: Complemental strand, 6170660 - 6170553
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| | |||||||||| ||||||||||||||||||| |     
T  6170660 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcatttttctctattttccaatgctatatttctatttttatctct 6170562  T
Q  383 ttatccaat 391  Q
    |||||||||    
T  6170561 ttatccaat 6170553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 43433776 - 43433887
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    ||||||| |||||||||||||||||||| | |||||||||| |||| ||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  43433776 atgtttgtattggtttcaacaacattttaatttttaaaaagttaaa-tttatcacttttcaccattttttaatactatatttctatttttatccccttat 43433874  T
Q  387 ccaatgccccaag 399  Q
    |||||||||||||    
T  43433875 ccaatgccccaag 43433887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 49901926 - 49902037
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||| |||| || ||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  49901926 catgtttgcattggtttcaacaacgttttaacgtttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatcctctta 49902024  T
Q  386 tccaatgccccaa 398  Q
    |||||| ||||||    
T  49902025 tccaataccccaa 49902037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 290 - 398
Target Start/End: Complemental strand, 50295535 - 50295428
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    ||||||||| ||||||||| |||||||||||||||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||    
T  50295535 tttgcattgatttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcactattttccaatactatatttctatttttacccccttatcca 50295437  T
Q  390 atgccccaa 398  Q
    |||||||||    
T  50295436 atgccccaa 50295428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 47655477 - 47655372
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||    
T  47655477 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcaattttcaccatttttcaatgctatacttctatttttatcccctta 47655379  T
Q  386 tccaatg 392  Q
    | |||||    
T  47655378 ttcaatg 47655372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 11385981 - 11386093
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||| ||||||||||||||||||||  |||    
T  11385981 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcaatttttaccattttccaatgctatatttctatttttatccaatta 11386079  T
Q  386 tccaatgccccaag 399  Q
    || |||| ||||||    
T  11386080 tctaatgtcccaag 11386093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 29966822 - 29966935
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||| ||||||||||| ||||| || |||||||||||||||  ||||||| |||| |||||||| ||||||||||||||||    
T  29966822 catgtttgcattggtttcaacaatattttgactttaaaaaaaattaaatttatcattttttgccatttttcaatgctatatttatatttttatcccctta 29966921  T
Q  386 tccaatgccccaag 399  Q
    |||||||| |||||    
T  29966922 tccaatgctccaag 29966935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 33929966 - 33930070
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||||| |||| |||||||| ||||||||||||||||    
T  33929966 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcagttttcactatttttcaatgctatatttatatttttatcccctta 33930064  T
Q  386 tccaat 391  Q
    ||||||    
T  33930065 tccaat 33930070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 283 - 399
Target Start/End: Complemental strand, 2125816 - 2125701
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||| ||| ||| |||||| |||||||||||||||||||||| |||| ||||||| ||||||| ||||| |||| ||||||||||||||||||||||    
T  2125816 taacatggttgtatttgtttcatcaacattttgacttttaaaaagttaaa-tttatcacttttcacaatttttcaatgctatatttctatttttatcccc 2125718  T
Q  383 ttatccaatgccccaag 399  Q
    |||||||||||||||||    
T  2125717 ttatccaatgccccaag 2125701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 24140773 - 24140883
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||  |||||||  |||||||||||||||||| ||||||||||||||||||||||||    
T  24140773 catgtttgcattggtttcaacaacattttgactttaaaaaagttaag-tttatcacgtttcaccattttccaatagtatatttctatttttatcccctta 24140871  T
Q  386 tccaatgccccaa 398  Q
    | |||||||||||    
T  24140872 t-caatgccccaa 24140883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 286 - 393
Target Start/End: Complemental strand, 4940846 - 4940740
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||| |||||||| ||||| |||||||||||||||||| |||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
T  4940846 catgtttgtattggttttaacaatattttgacttttaaaaagttaaa-tttatcacttttaaccattttccaatgctatatttctatttttatcccctta 4940748  T
Q  386 tccaatgc 393  Q
    ||||||||    
T  4940747 tccaatgc 4940740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 293 - 399
Target Start/End: Complemental strand, 32213988 - 32213883
Alignment:
Q  293 gcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatg 392  Q
    |||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||  | |||||||||||||||||||||||| ||||    
T  32213988 gcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccattttccaatgttctatttctatttttatccccttatctaatg 32213890  T
Q  393 ccccaag 399  Q
     ||||||    
T  32213889 tcccaag 32213883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 40845253 - 40845356
Alignment:
Q  288 tgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatc 387  Q
    ||||||| ||||||||||||| ||||||| |||||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||     
T  40845253 tgtttgctttggtttcaacaatattttgatttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatccccttatt 40845351  T
Q  388 caatg 392  Q
    |||||    
T  40845352 caatg 40845356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 394
Target Start/End: Original strand, 52396443 - 52396549
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||| ||||||| || |||||||||||||||||| |||| ||||||| |||| | |||||| ||||||||||||||||||||||||||||||    
T  52396443 catgtttgcatttgtttcaataatattttgacttttaaaaagttaaa-tttatcactttt-atcatttttcaatactatatttctatttttatcccctta 52396540  T
Q  386 tccaatgcc 394  Q
    |||||||||    
T  52396541 tccaatgcc 52396549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 7190581 - 7190469
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||| ||||||||| |||||| |||||||||||| |||| ||||||| |||||| ||||||  ||| |||||||||||||||||||| ||||    
T  7190581 catgtttgcattagtttcaacaccattttaacttttaaaaagttaaa-tttatcacttttcatcatttttgaatgctatatttctatttttatcctctta 7190483  T
Q  386 tccaatgccccaag 399  Q
     |||||||||||||    
T  7190482 accaatgccccaag 7190469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 28851011 - 28850904
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    |||||||||||||||||||  ||||||||||||||||| |||| ||||||| ||||||||||||||||||  ||||||||||||||||| | |||||| |    
T  28851011 tttgcattggtttcaacaat-ttttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatgttatatttctatttttattctcttatcta 28850914  T
Q  390 atgccccaag 399  Q
    ||||||||||    
T  28850913 atgccccaag 28850904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 26469687 - 26469584
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||| |||||||||||| || |||||||||||||||||| |||| ||||||||||||||  ||||| |||| |||||||| |||||||||||| ||||    
T  26469687 atgttttcattggtttcaataatattttgacttttaaaaagttaaa-tttatcatttttcattatttttcaatgctatatttttatttttatccctttat 26469589  T
Q  387 ccaat 391  Q
    |||||    
T  26469588 ccaat 26469584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 391
Target Start/End: Complemental strand, 28277591 - 28277484
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    |||||||||||||||| ||||||||||||||| | |||||||||| | |||||||||| |||| | |||||| ||||  ||||||||||||||||||| |    
T  28277591 taacatgtttgcattgttttcaacaacattttaatttttaaaaag-ttaaatttatcactttttatcatttttcaatgttatatttctatttttatcctc 28277493  T
Q  383 ttatccaat 391  Q
    |||||||||    
T  28277492 ttatccaat 28277484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 379
Target Start/End: Original strand, 50154470 - 50154565
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    |||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||| | |||||| |||| |||||||| ||||||||||    
T  50154470 taacatgtttgcattggtttcaacaacattttaactttt-aaaaggttaaatttatcattttttatcatttttcaatgctatatttatatttttatc 50154565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 399
Target Start/End: Original strand, 44286869 - 44286984
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    |||||||||||||||||||| || || ||||| | |||||||||| |||| ||||||||||||||| ||| || |||||| ||||| |||||||||||      
T  44286869 taacatgtttgcattggttttaataatattttaatttttaaaaagttaaa-tttatcatttttcactattctctaatactgtatttttatttttatcctt 44286967  T
Q  383 ttatccaatgccccaag 399  Q
    ||||  |||||||||||    
T  44286968 ttatataatgccccaag 44286984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 307 - 399
Target Start/End: Original strand, 45721773 - 45721864
Alignment:
Q  307 aacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    |||||||||| |||||||||| |||| ||||||| |||| |||||||||||||  ||||||| |||||||||| ||||||||||||| |||||    
T  45721773 aacattttgatttttaaaaagttaaa-tttatcagtttttaccattttccaatgttatatttttatttttatcaccttatccaatgctccaag 45721864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 366
Target Start/End: Original strand, 47895331 - 47895413
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatat 366  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||| | ||||||||||  |||||||||||| |||||||||||    
T  47895331 taacatgtttgcattagtttcaacaatattttgacatttaaaaag-ttaaatttatcacctttcaccatttttcaatactatat 47895413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 392
Target Start/End: Original strand, 4656020 - 4656121
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    |||||||| |||||||||||||||| | |||||||||| |||| ||||||| |||| || ||||||||||  ||||||| |||||||||  |||||||||    
T  4656020 tttgcattagtttcaacaacattttaatttttaaaaagttaaa-tttatcactttttactattttccaatgttatatttttatttttatttccttatcca 4656118  T
Q  390 atg 392  Q
    |||    
T  4656119 atg 4656121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 5945447 - 5945532
Alignment:
Q  313 ttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||   ||||||||||||||||  | ||||||||||| |||||    
T  5945447 ttgacttttaaaaag-taaaatttatcacttttcaccatttttcaatgtcatatttctatttttatttcgttatccaatgctccaag 5945532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 399
Target Start/End: Original strand, 14331852 - 14331949
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    ||||||||  ||||||||||||||||| |||| | | |||||||||||||||| ||||||| || ||||||||||||||   ||| |||||||||||||    
T  14331852 ttcaacaatgttttgacttttaaaaagttaaattct-tcatttttcaccatttcccaatacaatgtttctatttttatcattttaaccaatgccccaag 14331949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 399
Target Start/End: Original strand, 16691309 - 16691406
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    ||||||||  ||||||||||||||||| |||| | | |||||||| ||||||| ||||||| || ||||||||||||||  |||| |||||||||||||    
T  16691309 ttcaacaatgttttgacttttaaaaagttaaattct-tcattttttaccatttcccaatacaatgtttctatttttatcatcttaaccaatgccccaag 16691406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 395
Target Start/End: Original strand, 17402963 - 17403056
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccc 395  Q
    |||||||| |||||||||||||||||| |||| || |||| |||| ||||||||  ||||| ||||||  ||||||||||||||| |||||||||    
T  17402963 ttcaacaatattttgacttttaaaaagttaaa-ttcatcactttttaccattttttaatacaatattttaatttttatccccttaaccaatgccc 17403056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 391
Target Start/End: Original strand, 31975484 - 31975591
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||||||| |||| ||||| ||||||| |||||||||| | ||||||| || |||| | |||||| ||||  ||||||||||||| |||| |     
T  31975484 taacatgtttgcattagttttaacaatattttgatttttaaaaag-ttaaatttaccactttttatcatttttcaatgttatatttctatttatatctct 31975582  T
Q  383 ttatccaat 391  Q
    |||||||||    
T  31975583 ttatccaat 31975591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 379
Target Start/End: Original strand, 48938651 - 48938727
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    ||||||||  |||||||||||||||||   |||||| ||| |||||||||||||| ||||| |||||||||||||||||    
T  48938651 ttcaacaatgttttgacttttaaaaagt--aaatttttcacttttcaccattttctaatacaatatttctatttttatc 48938727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 399
Target Start/End: Original strand, 8244150 - 8244200
Alignment:
Q  349 cattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  8244150 cattttccaatgttatatttctatatttatccccttatccaatgccccaag 8244200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 395
Target Start/End: Original strand, 43168156 - 43168249
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccc 395  Q
    ||||||||  ||||||||||||||||| |||| | | ||| |||||||||||| ||||||| || ||||||||||||||  |||| |||||||||    
T  43168156 ttcaacaatgttttgacttttaaaaagttaaactct-tcacttttcaccatttcccaatacaatgtttctatttttatcatcttaaccaatgccc 43168249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 30222624 - 30222697
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatacta 363  Q
    ||||||||||||||||||| ||||| |||||| |||| || |||||||||| ||| || ||||||| |||||||    
T  30222624 tttgcattggtttcaacaatattttaactttttaaaaaattaaatttatcactttccatcattttctaatacta 30222697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 399
Target Start/End: Complemental strand, 44359763 - 44359666
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    ||||||||  ||||||||||||||||| |||| | | ||| |||||||||||| || |||| || ||||||||||||||  |||| |||||| ||||||    
T  44359763 ttcaacaatgttttgacttttaaaaagttaaattct-tcacttttcaccatttcccgatacaatgtttctatttttatcatcttaaccaatggcccaag 44359666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 290 - 392
Target Start/End: Original strand, 40920189 - 40920292
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcat--ttttcaccattttccaatactatatttctatttttatccccttatc 387  Q
    |||||||||| |||||||| ||||| |||||||||||| |||| || ||||   ||||||||| ||  |||| | |||||||||||||||||| |||| |    
T  40920189 tttgcattggattcaacaatattttaacttttaaaaagttaaa-ttaatcacacttttcaccacttctcaatgcaatatttctatttttatcctcttaac 40920287  T
Q  388 caatg 392  Q
    |||||    
T  40920288 caatg 40920292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 41492912 - 41493015
Alignment:
Q  289 gtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcc 388  Q
    |||||||| || |||| ||| ||||| |||||||||| | ||||||| |||| ||||||||| || ||||| | ||||||||| |||||||| |||| ||    
T  41492912 gtttgcatgggattcatcaatattttaacttttaaaatg-taaaattcatcacttttcaccacttcccaatgcaatatttcta-ttttatcctcttaacc 41493009  T
Q  389 aatgcc 394  Q
    ||||||    
T  41493010 aatgcc 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 41898950 - 41898878
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattt 374  Q
    |||||||| ||||| |||||||||||| |||| || |||| |||| |||||||| |||||| ||||||||||||    
T  41898950 ttcaacaatattttaacttttaaaaagttaaa-ttcatcactttttaccatttttcaatacaatatttctattt 41898878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 8892852 - 8892785
Alignment:
Q  311 ttttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    ||||||||||||||||| |||| | | | | |||||||||||||||||||| || ||||||||||||||    
T  8892852 ttttgacttttaaaaagttaaattcttt-acttttcaccattttccaatacgatgtttctatttttatc 8892785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 27210750 - 27210823
Alignment:
Q  311 ttttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||| |||||||||||| |||| || |||||||||||||||||| || ||| ||| || ||||||||||| ||||    
T  27210750 ttttaacttttaaaaagttaaa-ttgatcatttttcaccatttttcattacaatagttttatttttatcctctta 27210823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 393
Target Start/End: Original strand, 30222991 - 30223025
Alignment:
Q  359 tactatatttctatttttatccccttatccaatgc 393  Q
    |||||||||| ||||||||||||||||||||||||    
T  30222991 tactatatttatatttttatccccttatccaatgc 30223025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 2e-44; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 286 - 397
Target Start/End: Original strand, 6999202 - 6999312
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6999202 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcaccattttccaatactatatttctatttttatctcctta 6999300  T
Q  386 tccaatgcccca 397  Q
    |||| |||||||    
T  6999301 tccattgcccca 6999312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 765258 - 765147
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||| ||||||||||  |||||||||||||||||||||||||    
T  765258 atgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcacaattttccaatgttatatttctatttttatccccttat 765160  T
Q  387 ccaatgccccaag 399  Q
    |||||||||||||    
T  765159 ccaatgccccaag 765147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 290 - 392
Target Start/End: Original strand, 2966544 - 2966645
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  2966544 tttgcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccattttccaatgttatatttctatttttatccccttatcca 2966642  T
Q  390 atg 392  Q
    |||    
T  2966643 atg 2966645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 862589 - 862697
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  862589 catgtttgcattggtttcaacaagattttgactcttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatcccatta 862687  T
Q  386 tccaatgccc 395  Q
    | ||||||||    
T  862688 ttcaatgccc 862697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 39401643 - 39401532
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||| |||||||||||||| |||||||||||||||||| ||||  |||||| ||||||||||||| ||||  ||||||||||||||||||||||||    
T  39401643 catgtttgtattggtttcaacaaaattttgacttttaaaaagttaaa--ttatcacttttcaccatttttcaatgttatatttctatttttatcccctta 39401546  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  39401545 tccaatgccccaag 39401532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 283 - 399
Target Start/End: Original strand, 16361563 - 16361678
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||||| |||| |||||||||||||  ||||||||||||||||| |||    
T  16361563 taacatgtttgcattggtttcgacaacattttgacttttataaagttaaa-tttatcaatttttaccattttccaatgttatatttctatttttattccc 16361661  T
Q  383 ttatccaatgccccaag 399  Q
    ||||||||||| |||||    
T  16361662 ttatccaatgctccaag 16361678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 17603811 - 17603923
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||| |||||| ||||||||||||||||||||| |||| |||||||||||| | |||||| |||| ||||||||||||||||||| | |||    
T  17603811 catgtttgcattgatttcaataacattttgacttttaaaaagttaaa-tttatcattttttatcatttttcaatgctatatttctatttttatcgcgtta 17603909  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  17603910 tccaatgccccaag 17603923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 33726380 - 33726492
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||| |||| ||||||||| ||||| ||||||| |||| |||| ||||| ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  33726380 catgtttgtattgatttcaacaatattttaacttttagaaagttaaa-tttattatttttcaccatttttcaatactatatttttatttttatcccctta 33726478  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  33726479 tccaatgccccaag 33726492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 39085901 - 39085789
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||| | |||||||||||  |||||||||||||||||||| |||    
T  39085901 catgtttgcattgatttcaacaacattttgacttttaaaaagttaaa-tttatcactttttatcattttccaatgttatatttctatttttatcccttta 39085803  T
Q  386 tccaatgccccaag 399  Q
    ||||||| ||||||    
T  39085802 tccaatgtcccaag 39085789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 41436478 - 41436582
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||||||||||||||||||||| | || ||||||| |||||| |||||| ||||||||||||| ||||||||||||||||    
T  41436478 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaagtttatcacttttcatcatttttcaatactatatttttatttttatcccctta 41436576  T
Q  386 tccaat 391  Q
    | ||||    
T  41436577 ttcaat 41436582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 27495124 - 27495235
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||||||||||||||||||||||||||| |||||||| | |||| ||||||| |||||||||||||| |||  ||||||| |||||||||||||||||    
T  27495124 atgtttgcattggtttcaacaacattttgatttttaaaatgttaaa-tttatcacttttcaccattttctaatgttatatttttatttttatccccttat 27495222  T
Q  387 ccaatgccccaag 399  Q
     ||||||||||||    
T  27495223 tcaatgccccaag 27495235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 17118484 - 17118377
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    |||||| |||||||||||||||||||||||| || |||||||||| |||| |||||||||||||| ||||||||| || ||||||||||||||||||||     
T  17118484 taacatatttgcattggtttcaacaacattt-gagttttaaaaagttaaa-tttatcatttttcaacattttccagtattatatttctatttttatccct 17118387  T
Q  383 ttatccaatg 392  Q
    ||||||||||    
T  17118386 ttatccaatg 17118377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 1321168 - 1321280
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||| ||||| ||||||||||||||||| ||||||| || |||| ||||| |||||| |||||||||||||  ||||||||||||||||||| ||||    
T  1321168 catgtttacattgatttcaacaacattttgatttttaaagagttaaa-tttattattttttaccattttccaatgttatatttctatttttatcctctta 1321266  T
Q  386 tccaatgccccaag 399  Q
    |||||||| |||||    
T  1321267 tccaatgctccaag 1321280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 35445400 - 35445291
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||| |||||||||||||| |||||||||||| ||||  | |||||||||| ||||||||||||| ||||  ||||||| ||||||||||||||||    
T  35445400 catgtttgtattggtttcaacaatattttgacttttgaaaaagttaaatttatcacttttcaccatttttcaatgttatatttatatttttatcccctta 35445301  T
Q  386 tccaatgccc 395  Q
    | ||||||||    
T  35445300 ttcaatgccc 35445291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 9201606 - 9201499
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||| |||||||||||||  |||| |||||| ||||||||||| |     
T  9201606 taacatgtttgtattggtt-caacaacattttgacttttaaaaagttaaa-tttatcacttttcaccattttttaatattatattcctatttttatctca 9201509  T
Q  383 ttatccaatg 392  Q
    ||||||||||    
T  9201508 ttatccaatg 9201499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 290 - 395
Target Start/End: Complemental strand, 17095171 - 17095068
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||  |    |||||||||||||||||||| |||||||    
T  17095171 tttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttttcaccatttt-tagagttatatttctatttttatccctttatcca 17095074  T
Q  390 atgccc 395  Q
    ||||||    
T  17095073 atgccc 17095068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 33864352 - 33864460
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    |||||| ||||||||||||||||||| |||||||||||||||| | | |||||||| | |||||||||||||||||| | |||||| ||||||||||| |    
T  33864352 taacatatttgcattggtttcaacaatattttgacttttaaaatg-ttaaatttattacttttcaccattttccaatgcgatatttttatttttatcctc 33864450  T
Q  383 ttatccaatg 392  Q
    |||| |||||    
T  33864451 ttattcaatg 33864460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 379
Target Start/End: Original strand, 44173120 - 44173211
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    ||||||| |||||||||||||||||||| | ||||||||| || ||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  44173120 atgtttgtattggtttcaacaacattttaatttttaaaaa-attaaatttatcatttttcatcatttttcaatgctatatttctatttttatc 44173211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 398
Target Start/End: Complemental strand, 44299782 - 44299679
Alignment:
Q  294 cattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 393  Q
    ||||||||||||||| |||||||||||||||| | |||| ||||||| ||||||||||||| | |  |||||||||||||||||||| |||| |||||||    
T  44299782 cattggtttcaacaatattttgacttttaaaatgttaaa-tttatcacttttcaccatttttcgaggctatatttctatttttatcctcttacccaatgc 44299684  T
Q  394 cccaa 398  Q
    |||||    
T  44299683 cccaa 44299679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 387
Target Start/End: Complemental strand, 13998022 - 13997913
Alignment:
Q  277 tcttgctaacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt 376  Q
    ||||| || |||||||| |||| ||||||||| ||||| | |||||||||| |||| ||||||||||||||| ||||| |||| ||||||||||||||||    
T  13998022 tcttgttagcatgtttgtattgatttcaacaatattttaatttttaaaaagttaaa-tttatcatttttcacaatttttcaatgctatatttctattttt 13997924  T
Q  377 atccccttatc 387  Q
    || ||||||||    
T  13997923 attcccttatc 13997913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 290 - 395
Target Start/End: Complemental strand, 17056162 - 17056059
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||  | |  ||||||||| |||||||||| |||||||    
T  17056162 tttgcattggtttcaacaacattttgtcttttaaaaag-ttaaatttatcacttttcaccatttt-tagtgttatatttctttttttatccctttatcca 17056065  T
Q  390 atgccc 395  Q
    ||||||    
T  17056064 atgccc 17056059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 290 - 395
Target Start/End: Complemental strand, 17068609 - 17068506
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||  | |  ||||||||| |||||||||| |||||||    
T  17068609 tttgcattggtttcaacaacattttgtcttttaaaaag-ttaaatttatcacttttcaccatttt-tagtgttatatttctttttttatccctttatcca 17068512  T
Q  390 atgccc 395  Q
    ||||||    
T  17068511 atgccc 17068506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 464792 - 464896
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatca-tttttcaccattttccaatactatatttctatttttatccc 381  Q
    ||||||||||| |||| |||||| |||||||| |||||||||||| ||||| |||||| ||||| |||||||| ||||  ||||||||||||||||||||    
T  464792 taacatgtttgtattgatttcaataacattttaacttttaaaaagttaaaa-ttatcatttttttaccatttttcaatgttatatttctatttttatccc 464890  T
Q  382 cttatc 387  Q
     |||||    
T  464891 tttatc 464896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 395
Target Start/End: Complemental strand, 17074592 - 17074489
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    |||||||| ||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||  | |  |||||||||||||||||||| ||||| |    
T  17074592 tttgcattagtttcaacaacattttgtcttttaaaaag-ttaaatttatcacttttcaccatttt-tagtgttatatttctatttttatccctttatcta 17074495  T
Q  390 atgccc 395  Q
    ||||||    
T  17074494 atgccc 17074489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 23685764 - 23685688
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaata 360  Q
    |||||||||||||||| |||||| ||||||||||||||||||||| | |||||||||| ||||| |||||||||||||    
T  23685764 taacatgtttgcattgatttcaataacattttgacttttaaaaag-ttaaatttatcacttttccccattttccaata 23685688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 332
Target Start/End: Complemental strand, 11445431 - 11445382
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaa 332  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  11445431 taacatgtttgcattggtttcaacaacattttgacatttaaaaagttaaa 11445382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 34334270 - 34334167
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||| ||||| |||||||| ||||| | || ||||||| | || ||| |||||||| ||||||||| ||||| |||||||||||||||||  ||||    
T  34334270 catgtttgtattggattcaacaatattttaatttgtaaaaagtttaa-tttgtcattttttaccattttcaaatacaatatttctatttttatcatctta 34334172  T
Q  386 tccaa 390  Q
    |||||    
T  34334171 tccaa 34334167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 290 - 392
Target Start/End: Original strand, 2239586 - 2239687
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    |||| ||||| |||||||| ||||| |||||||||||| | ||||| ||||||||| |||||||| || | | |||||||||| ||||||| |||| |||    
T  2239586 tttgtattggattcaacaatattttaacttttaaaaag-ttaaattcatcattttttaccatttttcattgcaatatttctatctttatcctcttaacca 2239684  T
Q  390 atg 392  Q
    |||    
T  2239685 atg 2239687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 391
Target Start/End: Complemental strand, 43140419 - 43140328
Alignment:
Q  299 gtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaat 391  Q
    ||||||| || ||||| | |||||||||| |||| |||||||||||||  |||||| ||||  ||||||| ||||||||||| ||||||||||    
T  43140419 gtttcaataatatttttaattttaaaaagttaaa-tttatcatttttcgtcatttttcaatgttatatttttatttttatcctcttatccaat 43140328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 15004927 - 15004987
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttca 347  Q
    |||||||| |||||||||||||||||||| | |||||||||| | |||||||||| ||||||    
T  15004927 catgtttgtattggtttcaacaacattttaatttttaaaaag-ttaaatttatcacttttca 15004987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 374
Target Start/End: Complemental strand, 11445356 - 11445313
Alignment:
Q  331 aaatttatcatttttcaccattttccaatactatatttctattt 374  Q
    |||||||||||||||||||||||| ||||  |||||||||||||    
T  11445356 aaatttatcatttttcaccatttttcaatgttatatttctattt 11445313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 392
Target Start/End: Complemental strand, 34220740 - 34220650
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatg 392  Q
    |||||||| ||||| |||||||||||  |||| || |||| ||||||||| || ||||| | | |||||||||||||||| |||| ||||||    
T  34220740 ttcaacaatattttaacttttaaaaacttaaa-ttcatcacttttcaccacttcccaatgcaagatttctatttttatcctcttaaccaatg 34220650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 2805382 - 2805488
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaaga-taaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||| ||| | |||||||| ||||||||||||||||| | | ||||| |||| |||| |  ||||| |||||| ||| || ||||||||||| ||||    
T  2805382 atgtttgtattagattcaacaatattttgacttttaaaaaaagttaaattcatcacttttaattatttttcaatacaatacttatatttttatcctctta 2805481  T
Q  386 tccaatg 392  Q
     ||||||    
T  2805482 accaatg 2805488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 399
Target Start/End: Original strand, 11659277 - 11659374
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    |||||||| ||||| | |||||||||| |||| | | ||| ||||||| ||||| |||||| |||||| ||||||||||| |||| | ||||| |||||    
T  11659277 ttcaacaatattttaatttttaaaaagttaaattct-tcacttttcactatttttcaatacaatatttttatttttatcctcttaacgaatgctccaag 11659374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 12695286 - 12695233
Alignment:
Q  346 caccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    |||||||||||||||| || ||||||||||||||  |||| ||||||| |||||    
T  12695286 caccattttccaatacaatgtttctatttttatcatcttaaccaatgctccaag 12695233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 1729528 - 1729592
Alignment:
Q  331 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccc 395  Q
    |||| ||||||||||||||||||| |||||| | |||||||  ||| ||| |||| |||||||||    
T  1729528 aaatctatcatttttcaccatttttcaatacaacatttctaagtttgtcctcttaaccaatgccc 1729592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 378
Target Start/End: Complemental strand, 34316378 - 34316342
Alignment:
Q  342 ttttcaccattttccaatactatatttctatttttat 378  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  34316378 ttttcaccatttttcaatacaatatttctatttttat 34316342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 378
Target Start/End: Original strand, 37230267 - 37230311
Alignment:
Q  334 tttatcatttttcaccattttccaatactatatttctatttttat 378  Q
    ||||||| ||||||||||||| |||||| ||||||||||| ||||    
T  37230267 tttatcacttttcaccatttttcaatacaatatttctattcttat 37230311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 43567615 - 43567503
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  43567615 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatactataattctatttttatctcctta 43567517  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  43567516 tccaatgccccaag 43567503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 29034687 - 29034799
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  29034687 catgtttgcattagtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttatatttttatcccctta 29034785  T
Q  386 tccaatgccccaag 399  Q
    ||||||||| ||||    
T  29034786 tccaatgcctcaag 29034799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 5240441 - 5240329
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||    
T  5240441 catgtttgcattggtttcaataacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatcccttta 5240343  T
Q  386 tccaatgccccaag 399  Q
    ||||||||| ||||    
T  5240342 tccaatgcctcaag 5240329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 40763253 - 40763361
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    ||||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  40763253 tttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatcacttttcaccatttttcaatgttatatttctatttttatccccttatcca 40763351  T
Q  390 atgccccaag 399  Q
    ||||||||||    
T  40763352 atgccccaag 40763361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 42222218 - 42222326
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  42222218 taacatgtttgtattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaataccatatttctatttttatcccc 42222316  T
Q  383 ttatccaatg 392  Q
    ||||| ||||    
T  42222317 ttatctaatg 42222326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 8380442 - 8380553
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| ||||||| |||||| ||||||||||| |||||||| |||||||||||||||||    
T  8380442 atgttttcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcatcattttccaatgctatatttttatttttatccccttat 8380540  T
Q  387 ccaatgccccaag 399  Q
    ||||| |||||||    
T  8380541 ccaataccccaag 8380553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 43958195 - 43958087
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||||||||||||||  || ||||||||||||||||| || |||||||||||||||||| |||||| ||||||||||||||||||||||| ||    
T  43958195 taacatgtttgcattggtttcagtaatattttgacttttaaaaa-attaaatttatcatttttcacaattttctaatactatatttctatttttatcgcc 43958097  T
Q  383 ttatccaatg 392  Q
    ||||||||||    
T  43958096 ttatccaatg 43958087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 8292745 - 8292856
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||| |||| ||||||||||||||||||||||||||||  ||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  8292745 catgtttggattgatttcaacaacattttgacttttaaaaaggcaaa-tttataacttttcaccattttccaatgctatatttctatttttatcccctta 8292843  T
Q  386 tccaatgccccaa 398  Q
    |||||||| ||||    
T  8292844 tccaatgctccaa 8292856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 27053601 - 27053494
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||  || ||||||||||||||||||||| ||||    
T  27053601 atgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttctgatgctatatttctatttttatccctttat 27053503  T
Q  387 ccaatgccc 395  Q
    |||||||||    
T  27053502 ccaatgccc 27053494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 7323062 - 7322958
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| |||   ||||||||||||||||||| ||||    
T  7323062 catgtttgcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccatttttcaaggttatatttctatttttatcctctta 7322964  T
Q  386 tccaat 391  Q
    ||||||    
T  7322963 tccaat 7322958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 22521586 - 22521694
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| || ||| ||||||||||| ||||||||||| |||||||| ||||    
T  22521586 catgtttgcattggtttcaacaacattttgacttttaagaagttaaa-tttatcacttctcatcattttccaatgctatatttctagttttatcctctta 22521684  T
Q  386 tccaatgccc 395  Q
    ||||||||||    
T  22521685 tccaatgccc 22521694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 24359817 - 24359713
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||| ||||||  |||| ||||||||||| | |||||||||||||||||||||||||    
T  24359817 catgtttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatccctttttaccattttccattgctatatttctatttttatcccctta 24359719  T
Q  386 tccaat 391  Q
    ||||||    
T  24359718 tccaat 24359713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 22707049 - 22707159
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||  |||||||||| |||||||||||||||||| || |||    
T  22707049 catgtttgcattggtttcaacaacatgttaacttttaaaaag-taaaatttatcatttttcattattttccaatgctatatttctatttttat-ccttta 22707146  T
Q  386 tccaatgccccaa 398  Q
    | |||||||||||    
T  22707147 ttcaatgccccaa 22707159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 283 - 398
Target Start/End: Original strand, 49069552 - 49069666
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||| |||||||||||||| || |||| |||||||||| || | ||||||| ||||||||||||| ||||||||||||||||||||||||  |    
T  49069552 taacatgtttgtattggtttcaacaatatattgatttttaaaaagttaga-tttatcacttttcaccatttttcaatactatatttctatttttatcttc 49069650  T
Q  383 ttatccaatgccccaa 398  Q
    ||||||||||||||||    
T  49069651 ttatccaatgccccaa 49069666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 399
Target Start/End: Complemental strand, 30538589 - 30538477
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    |||||||||||||||| ||||||||   |||||| |||||||||| |||| ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  30538589 taacatgtttgcattgatttcaaca---ttttgatttttaaaaagttaaa-tttatcatttttcactattttctaatactatatttctatttttatcccc 30538494  T
Q  383 ttatccaatgccccaag 399  Q
    ||||| |||| ||||||    
T  30538493 ttatctaatgtcccaag 30538477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 41188894 - 41188785
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||| |||||||  ||||||||||||||||| |||||||| ||||||||||| |||||    
T  41188894 atgtttgcattgatttcaacagcattttgacttttaaaaagttaaa-tttatcacctttcaccattttccaatgctatatttatatttttatcctcttat 41188796  T
Q  387 ccaatgcccca 397  Q
    | |||||||||    
T  41188795 caaatgcccca 41188785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 290 - 398
Target Start/End: Complemental strand, 40067021 - 40066915
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    |||| |||||||| ||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  40067021 tttgtattggttttaacaacatttt-atttttaaaaagttaaa-tttatcatttttcaccatttttcaatattatatttctatttttatccccttatcca 40066924  T
Q  390 atgccccaa 398  Q
    |||| ||||    
T  40066923 atgcaccaa 40066915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 291 - 390
Target Start/End: Original strand, 3681699 - 3681797
Alignment:
Q  291 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaa 390  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||||||||||||||  | ||||| |||||||||||||||||||||    
T  3681699 ttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatcacttttcaccattttccaatgttgtatttttatttttatccccttatccaa 3681797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 1910244 - 1910351
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||| |||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  1910244 catgtttacatttgtttcaacaacattttaacttttaaaaagttaaa-tttatcatttttcaccattttctaatgttatatttctatttttat-ccctta 1910341  T
Q  386 tccaatgccc 395  Q
    || |||||||    
T  1910342 tcaaatgccc 1910351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 310 - 399
Target Start/End: Complemental strand, 48454907 - 48454819
Alignment:
Q  310 attttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    |||||||||||||||||| |||| ||||||| |||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  48454907 attttgacttttaaaaagttaaa-tttatcacttttcaccatttcccaatgttatatttctatttttatccccttatccaatgccccaag 48454819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 286 - 381
Target Start/End: Original strand, 40194826 - 40194920
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccc 381  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||| || |||  |||||||||||| ||||||||||||    
T  40194826 catgtttgcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcatcaatttataatactatatttatatttttatccc 40194920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 306 - 399
Target Start/End: Original strand, 36279139 - 36279231
Alignment:
Q  306 caacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    ||||||||||| |||||||||| |||| ||||||| |||||||||||||||||| |||||||| |||||||||||  |||||||||||||||||    
T  36279139 caacattttgatttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttatatttttatcctattatccaatgccccaag 36279231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 46478667 - 46478560
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    |||||| |||||||| |||||||||| ||||| |||||||||||| |||| ||||||||||| ||| ||||| ||||  |||||||||||||||||||||    
T  46478667 taacatatttgcattagtttcaacaatattttaacttttaaaaagttaaa-tttatcatttt-cactatttttcaatgatatatttctatttttatcccc 46478570  T
Q  383 ttatccaatg 392  Q
    ||||||||||    
T  46478569 ttatccaatg 46478560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 8258746 - 8258640
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||||||||||||||||||| ||| ||||| |||||||| | |||||||||| ||||||||||||| ||     ||||||||||||||||||||||||    
T  8258746 atgtttgcattggtttcaacaaaattatgactattaaaaag-ttaaatttatcacttttcaccatttttca-----atatttctatttttatccccttat 8258653  T
Q  387 ccaatgccccaag 399  Q
    || ||||||||||    
T  8258652 ccgatgccccaag 8258640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 5348078 - 5347973
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||   ||||||||||||||||| |||| ||||||| |||||| |||||||||||  ||||||||||||| ||| ||||||    
T  5348078 catgtttgcattggtttcaaca---ttttgacttttaaaaagttaaa-tttatcacttttcatcattttccaatgttatatttctatttatattccctta 5347983  T
Q  386 tccaatgccc 395  Q
    | ||||||||    
T  5347982 ttcaatgccc 5347973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 287 - 378
Target Start/End: Original strand, 46042749 - 46042838
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttat 378  Q
    ||||||||||||||||||||||||||| |||||| |||||| | |||||||| | ||||||||||||| |||||||||||||||||||||||    
T  46042749 atgtttgcattggtttcaacaacatttagactttaaaaaag-ttaaatttataacttttcaccatttt-caatactatatttctatttttat 46042838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 31626147 - 31626051
Alignment:
Q  289 gtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||||||||||||||||||||||||| |||||||||| | |||||||||| |||||| ||||||  |||| ||||||| |||||||||| ||||||    
T  31626147 gtttgcattggtttcaacaacattttgatttttaaaaag-ttaaatttatcacttttcatcattttttaatattatatttttatttttatctccttat 31626051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 376
Target Start/End: Original strand, 42291284 - 42291371
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcacca-ttttccaatactatatttctattttt 376  Q
    |||||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||| | ||||||||||| ||||||||||||||    
T  42291284 tttgcattggattcaacaatattttaacttttaaaaaaataaaatttattatttttcactatttttccaatacaatatttctattttt 42291371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 29687476 - 29687547
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaa 358  Q
    ||||||||||||||||||||||||||||| |||||||||||| | ||||| |||| |||||||||||||||||    
T  29687476 catgtttgcattggtttcaacaacattttaacttttaaaaag-ttaaattcatcacttttcaccattttccaa 29687547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 1907697 - 1907593
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    ||||||||||||  |||||||| ||||||| | ||||||| || ||||| || |||||| |||||||| |||||| |||||||| |||||||||  ||||    
T  1907697 atgtttgcattgcattcaacaatattttgattattaaaaa-attaaattcattattttttaccatttttcaatacaatatttctctttttatccttttat 1907599  T
Q  387 ccaatg 392  Q
    ||||||    
T  1907598 ccaatg 1907593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 30388760 - 30388693
Alignment:
Q  295 attggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatacta 363  Q
    |||| |||||| || |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||    
T  30388760 attgatttcaataatattttgacttttaaaaagttaaa-tttatcatttttcaccatttttcaatacta 30388693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 31360357 - 31360309
Alignment:
Q  331 aaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    |||||||||| |||| ||||||| ||||||| |||||||||||||||||    
T  31360357 aaatttatcactttttaccatttcccaatacaatatttctatttttatc 31360309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 359
Target Start/End: Original strand, 6548533 - 6548602
Alignment:
Q  289 gtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaat 359  Q
    ||||||||||| | |||||| ||||| |||||||||||| | ||||| ||||||||||||| ||| |||||    
T  6548533 gtttgcattggatccaacaatattttaacttttaaaaag-ttaaattcatcatttttcaccgtttcccaat 6548602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 316
Target Start/End: Original strand, 29959068 - 29959097
Alignment:
Q  287 atgtttgcattggtttcaacaacattttga 316  Q
    ||||||||||||||||||||||||||||||    
T  29959068 atgtttgcattggtttcaacaacattttga 29959097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 375
Target Start/End: Original strand, 32204186 - 32204270
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttt 375  Q
    |||||||||  ||||| || ||||| |||||||||||| |||| || |||| |||||| |||||| |||| | |||||||||||||    
T  32204186 tttgcattgtattcaaaaatattttaacttttaaaaagttaaa-ttcatcacttttcatcatttttcaatgcaatatttctatttt 32204270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 376
Target Start/End: Complemental strand, 37869429 - 37869384
Alignment:
Q  331 aaatttatcatttttcaccattttccaatactatatttctattttt 376  Q
    |||| |||||||||||| ||||||||||||| |||||| |||||||    
T  37869429 aaatatatcatttttcatcattttccaatacaatatttttattttt 37869384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 379
Target Start/End: Complemental strand, 42552579 - 42552489
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    ||||||||||||  || ||||| |||||||||||||||||| |  |||| || |||||| || ||||| ||| || |||||| ||||||||||    
T  42552579 atgtttgcattgaatttaacaatattttgacttttaaaaagtt--aattcattattttttactatttttcaacacaatatttttatttttatc 42552489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 3720198 - 3720131
Alignment:
Q  311 ttttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    |||| |||||||||||| |||| ||||||||||| ||||||||  |||| | ||||| |||||||||||    
T  3720198 ttttaacttttaaaaagttaaa-tttatcattttacaccatttgtcaatgcaatattactatttttatc 3720131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 286 - 394
Target Start/End: Complemental strand, 36730262 - 36730155
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||    
T  36730262 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttatatttttatcccctta 36730164  T
Q  386 tccaatgcc 394  Q
    |||||||||    
T  36730163 tccaatgcc 36730155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 283 - 398
Target Start/End: Complemental strand, 4759962 - 4759848
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |||| |||||||||||||||||||||     
T  4759962 taacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatgctatatttctatttttatccct 4759864  T
Q  383 ttatccaatgccccaa 398  Q
    ||||||||||| ||||    
T  4759863 ttatccaatgctccaa 4759848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 8715610 - 8715503
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  8715610 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttttcaccattttccaatgctatatttctattttta-cccctta 8715513  T
Q  386 tccaatgccc 395  Q
    ||||||||||    
T  8715512 tccaatgccc 8715503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 9067497 - 9067390
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  9067497 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttttcaccattttccaatgctatatttctattttta-cccctta 9067400  T
Q  386 tccaatgccc 395  Q
    ||||||||||    
T  9067399 tccaatgccc 9067390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 29915683 - 29915572
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||||||||||||||||| |||||||||||||||||||| |||| ||||| |||||| |||||||||||||||||||||| |||||||||||||||||    
T  29915683 atgtttgcattggtttcaaccacattttgacttttaaaaagttaaa-tttataattttttaccattttccaatactatatttttatttttatccccttat 29915585  T
Q  387 ccaatgccccaag 399  Q
    |||| ||||||||    
T  29915584 ccaacgccccaag 29915572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 29964836 - 29964725
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||||||||||||||||| |||||||||||||||||||| |||| ||||| |||||| |||||||||||||||||||||| |||||||||||||||||    
T  29964836 atgtttgcattggtttcaaccacattttgacttttaaaaagttaaa-tttataattttttaccattttccaatactatatttttatttttatccccttat 29964738  T
Q  387 ccaatgccccaag 399  Q
    |||| ||||||||    
T  29964737 ccaacgccccaag 29964725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 46317483 - 46317591
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||  ||||||||||||||||||  |    
T  46317483 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcatttttcatcattttccaatgttatatttctatttttatctac 46317581  T
Q  383 ttatccaatg 392  Q
    ||||||||||    
T  46317582 ttatccaatg 46317591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 283 - 399
Target Start/End: Original strand, 32415566 - 32415681
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| | ||||||| ||||| |||| |||||||||||||||||||||     
T  32415566 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatgacttttcacaatttttcaatgctatatttctatttttatccct 32415664  T
Q  383 ttatccaatgccccaag 399  Q
    |||||||||||| ||||    
T  32415665 ttatccaatgcctcaag 32415681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 283 - 398
Target Start/End: Complemental strand, 44695783 - 44695669
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    |||||||||||||||| ||||||||||||||| | |||||||||| |||| ||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  44695783 taacatgtttgcattgatttcaacaacattttaatttttaaaaagttaaa-tttatcatttttcaccattttccaagattatatttatatttttatcccc 44695685  T
Q  383 ttatccaatgccccaa 398  Q
    |||||||||| |||||    
T  44695684 ttatccaatgtcccaa 44695669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 283 - 398
Target Start/End: Original strand, 37509108 - 37509222
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| |||||||||| ||  ||||| ||||||||||||    
T  37509108 taacatatttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcactattttccaatgctgcatttcaatttttatcccc 37509206  T
Q  383 ttatccaatgccccaa 398  Q
    ||||||||||||||||    
T  37509207 ttatccaatgccccaa 37509222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 387
Target Start/End: Complemental strand, 12905391 - 12905292
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  12905391 catgtttgcattggtttcaacaacattttgacttttaaaatg-ttaaatttatcatttttcaccatttt-caatgttatatttctatttttatcccctta 12905294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 44570495 - 44570383
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| || |||| ||||||||||||||||||  |||||||||||||| ||||| |||    
T  44570495 catgtttgcattgatttcaacaacattttgacttttaaaaagttaaagtt-atcacttttcaccattttccaatgttatatttctattttgatcccttta 44570397  T
Q  386 tccaatgccccaag 399  Q
    || |||||||||||    
T  44570396 tcgaatgccccaag 44570383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 10854859 - 10854975
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt----atccc 381  Q
    ||||||||||||||||||||||||||||| |||||||||||| | |||||||| | |||||||||||||||||| ||||||||||| ||||    |||||    
T  10854859 catgtttgcattggtttcaacaacattttaacttttaaaaag-ttaaatttattagttttcaccattttccaatgctatatttctacttttatccatccc 10854957  T
Q  382 cttatccaatgccccaag 399  Q
    ||||||||||||||||||    
T  10854958 cttatccaatgccccaag 10854975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 377
Target Start/End: Original strand, 52570783 - 52570872
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttta 377  Q
    |||||||||||||||||||||| |||||||||||||||||| || | ||||||| ||||||||||||||||||||||||||||||||||||    
T  52570783 atgtttgcattggtttcaacaatattttgacttttaaaaagttata-tttatcacttttcaccattttccaatactatatttctattttta 52570872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 35306332 - 35306436
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||| |||||| |||||||| |||||||||||| |||| ||||||| |||||| |||||||||||  ||||||||||||||||||||||||    
T  35306332 catgtttgcattgatttcaataacattttaacttttaaaaagttaaa-tttatcacttttcatcattttccaatgttatatttctatttttatcccctta 35306430  T
Q  386 tccaat 391  Q
    ||||||    
T  35306431 tccaat 35306436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 51817421 - 51817313
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||| ||| |||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||||| ||||||||||| ||||    
T  51817421 catgtttgtattagtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttttatttttatcctctta 51817323  T
Q  386 tccaatgccc 395  Q
    | ||||||||    
T  51817322 ttcaatgccc 51817313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 8847561 - 8847449
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||| ||||| ||||||||| ||||| |||||||||||| |||| || |||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  8847561 catgtttacattgttttcaacaatattttaacttttaaaaagttaaa-ttaatcactttttaccattttccaatgttatatttctatttttatcccctta 8847463  T
Q  386 tccaatgccccaag 399  Q
    ||||||| ||||||    
T  8847462 tccaatgtcccaag 8847449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 12051038 - 12051142
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||| ||||||||||||||| | |||||||||| |||| ||||||||||||||  ||||| |||||||||||||||||||||||  |||||    
T  12051038 catgtttgcattgttttcaacaacattttaatttttaaaaagttaaa-tttatcatttttcattattttacaatactatatttctatttttatttcctta 12051136  T
Q  386 tccaat 391  Q
    ||||||    
T  12051137 tccaat 12051142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 25102426 - 25102319
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    ||||||||||||||||||| ||||| ||||| |||||  |||  ||||||| |||| ||||||||||||| ||||||||||||||||||| | |||||||    
T  25102426 tttgcattggtttcaacaatattttaactttaaaaaaattaa--tttatcactttttaccattttccaatgctatatttctatttttatctcattatcca 25102329  T
Q  390 atgccccaag 399  Q
    ||| ||||||    
T  25102328 atgtcccaag 25102319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 331 - 399
Target Start/End: Original strand, 1803932 - 1804000
Alignment:
Q  331 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    ||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  1803932 aaatttatcattttttaccctttttcaataatatatttctatttttatccccttatccaatgccccaag 1804000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 45899652 - 45899540
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatca-tttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||| |||||  |||||||| |||||||||||||||||  |||| || |||| ||||||| ||||||||||||  |||||||||||||||| | ||||    
T  45899652 atgtttacattgaattcaacaatattttgacttttaaaaatttaaa-ttcatcactttttcatcattttccaatataatatttctatttttattctctta 45899554  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  45899553 tccaatgccccaag 45899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 371
Target Start/End: Complemental strand, 20227492 - 20227405
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttcta 371  Q
    ||||||||||| ||||||||||| |||||||| |||||||| ||| | |||||||||| |||||| |||||| |||| |||||||||||    
T  20227492 taacatgtttgtattggtttcaataacattttaacttttaagaag-ttaaatttatcacttttcatcatttttcaatgctatatttcta 20227405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 395
Target Start/End: Complemental strand, 18888 - 18788
Alignment:
Q  294 cattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 393  Q
    |||||| |||||||| ||||| | |||||||||| |||| || |||| |||||||| ||| ||||| | |||||||||||||||||| |||| |||||||    
T  18888 cattggattcaacaatattttaatttttaaaaagttaaa-ttcatcacttttcaccgtttcccaatgcaatatttctatttttatcctcttaaccaatgc 18790  T
Q  394 cc 395  Q
    ||    
T  18789 cc 18788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 31647304 - 31647364
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttca 347  Q
    ||||||||||||| |||||| ||||||||||||||||||||| | |||||||||||||||||    
T  31647304 catgtttgcattgatttcaataacattttgacttttaaaaag-ttaaatttatcatttttca 31647364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 376
Target Start/End: Complemental strand, 34060873 - 34060786
Alignment:
Q  288 tgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt 376  Q
    |||||||||||  |||||||| ||||| |||||||||||| |||| || |||| ||||||||||||| |||||| |||||| |||||||    
T  34060873 tgtttgcattgaattcaacaatattttaacttttaaaaagttaaa-ttcatcacttttcaccatttttcaatacaatatttttattttt 34060786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 41346346 - 41346386
Alignment:
Q  359 tactatatttctatttttatccccttatccaatgccccaag 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41346346 tactatatttctatttttatccccttatccaatgccccaag 41346386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 343 - 399
Target Start/End: Complemental strand, 48136776 - 48136720
Alignment:
Q  343 tttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||| |||||||    
T  48136776 tttcacaattttccaatgctatatttctatttttattcccttatccaataccccaag 48136720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 288 - 362
Target Start/End: Original strand, 41345977 - 41346050
Alignment:
Q  288 tgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatact 362  Q
    ||||||||||||||||||||| ||||| ||||||||||| || |||||||| | ||||||| ||||| |||||||    
T  41345977 tgtttgcattggtttcaacaatattttaacttttaaaaa-attaaatttattacttttcactatttttcaatact 41346050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 381
Target Start/End: Original strand, 11675320 - 11675405
Alignment:
Q  293 gcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccc 381  Q
    ||||||| |||||||| |||||||| ||||||||| |||| ||  |||||||  |||||||| |||||| |||||||||||||||||||    
T  11675320 gcattggattcaacaatattttgacatttaaaaagttaaa-ttcgtcatttt--accatttttcaatacaatatttctatttttatccc 11675405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 385
Target Start/End: Original strand, 39436493 - 39436563
Alignment:
Q  314 tgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||| |||| | | | ||||||||||||||| |||||| |||||||||||||||||| ||||    
T  39436493 tgacttttaaaaagttaaattcttt-atttttcaccatttttcaatacaatatttctatttttatcctctta 39436563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 378
Target Start/End: Complemental strand, 19029 - 18946
Alignment:
Q  294 cattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttat 378  Q
    |||||| |||||||| ||||| | |||||||||| |||| || |||| |||||||| ||| ||||| | ||||||||||||||||    
T  19029 cattggattcaacaatattttaatttttaaaaagttaaa-ttcatcacttttcaccgtttcccaatgcaatatttctatttttat 18946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 380
Target Start/End: Complemental strand, 49976232 - 49976157
Alignment:
Q  304 aacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcc 380  Q
    ||||| |||||||||||||||||| |||| || |||| |||||||||||   |||||| ||| ||||||||||||||    
T  49976232 aacaatattttgacttttaaaaagttaaa-ttcatcacttttcaccattagtcaatacaataattctatttttatcc 49976157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 369
Target Start/End: Original strand, 11316970 - 11317048
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttc 369  Q
    |||||||| | ||||| || |||||||||||||||||| | ||||| || | ||||||||||||||||| || |||||||    
T  11316970 tttgcattagattcaataatattttgacttttaaaaag-ttaaattcataacttttcaccattttccaaaacaatatttc 11317048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 398
Target Start/End: Complemental strand, 12060153 - 12060057
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaa 398  Q
    ||||||||  |||| |||||||||||  | |||| ||||| |||||| ||||||||||||| |||||||||  ||| ||| |||| ||||| ||||||    
T  12060153 ttcaacaattttttaacttttaaaaac-tcaaatctatcacttttcatcattttccaatacaatatttctaaatttgtcctcttaaccaataccccaa 12060057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 409
Target Start/End: Complemental strand, 44019172 - 44019107
Alignment:
Q  344 ttcaccattttccaatactatatttctatttttatccccttatccaatgccccaagcattcacctt 409  Q
    |||||||||||  |||  ||||||| ||||||||||||||||| |||||| ||||| |||| ||||    
T  44019172 ttcaccattttttaatgatatatttatatttttatccccttattcaatgctccaaggattctcctt 44019107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 398
Target Start/End: Complemental strand, 48313932 - 48313836
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaa 398  Q
    ||||||||  |||||| |||||||||| | |||||| ||  |||||||||||| ||||||| || |||||||||||||   ||||  |||||||||||    
T  48313932 ttcaacaatgttttgatttttaaaaag-tcaaatttttcgcttttcaccatttcccaatacaatgtttctatttttatgatcttaatcaatgccccaa 48313836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 375
Target Start/End: Original strand, 21324521 - 21324603
Alignment:
Q  291 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttt 375  Q
    |||||| || |||||||| ||||| |||||||||||| | |||| ||||| |||||| || |||||||| | |||||||||||||    
T  21324521 ttgcatcggattcaacaatattttaacttttaaaaag-ttaaatctatcacttttcatca-tttccaatgcaatatttctatttt 21324603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 19389419 - 19389307
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||| ||||||| | |||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  19389419 catgtttgcattgttttcaacgatattttgacttttaaaaagttaaa-tttatcacttttcacaattttccaatactatatttctatttttatcccctta 19389321  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  19389320 tccaatgccccaag 19389307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 21016234 - 21016345
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| | ||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  21016234 catgtttgcattggcttcaacaacattttgacttttaaaaagttaaa-tctatcacttttcaccatttttcaatattatatttctatttttatcccctta 21016332  T
Q  386 tccaatgccccaa 398  Q
    ||||| |||||||    
T  21016333 tccaaagccccaa 21016345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 25249450 - 25249345
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||||| |||||||| |||||||    
T  25249450 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttttatttttaccccctta 25249352  T
Q  386 tccaatg 392  Q
    |||||||    
T  25249351 tccaatg 25249345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 287 - 387
Target Start/End: Original strand, 18068963 - 18069062
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    ||||||||||| ||||||||||||||||||| ||||||||| |||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  18068963 atgtttgcattagtttcaacaacattttgacctttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttctatttttatccccttat 18069061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 45338005 - 45338112
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||||||||||| |||| |||||||||| |||||||||| |||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  45338005 atgtttgcattggtctcaataacattttgatttttaaaaagttaaa-tttatcatttttcaccatttttcaatgttatatttctatttttatccccttat 45338103  T
Q  387 ccaatgccc 395  Q
    |||||||||    
T  45338104 ccaatgccc 45338112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 283 - 397
Target Start/End: Original strand, 6939155 - 6939268
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| || |||||||||| ||||  |||||||||||||||||| |     
T  6939155 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttgtcaccatttttcaatgttatatttctatttttatctca 6939253  T
Q  383 ttatccaatgcccca 397  Q
    |||| ||||||||||    
T  6939254 ttattcaatgcccca 6939268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 290 - 392
Target Start/End: Original strand, 8018765 - 8018866
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    |||||||| |||| ||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8018765 tttgcattagttttaacaacattttgatttttaaaaagttaaa-tttatcacttttcaccattttccaatattatatttctatttttatccccttatcca 8018863  T
Q  390 atg 392  Q
    |||    
T  8018864 atg 8018866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 393
Target Start/End: Original strand, 4989936 - 4990039
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||   ||||||| ||||||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  4989936 catgtttgcattggtttcaaca---ttttgacatttaaaaagttaaa-tttatcatttttcactattttccaatgctatatttctatttttatcccctta 4990031  T
Q  386 tccaatgc 393  Q
    ||||||||    
T  4990032 tccaatgc 4990039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 21016166 - 21016063
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||||| ||||||||||||||||||||||||||| | |||| ||||| |||| |||||||| ||||  ||||||||||||||||||||||||    
T  21016166 catgtttgcattggcttcaacaacattttgacttttaaaaag-ttaaatctatcacttttaaccatttttcaatgttatatttctatttttatcccctta 21016068  T
Q  386 tccaa 390  Q
    |||||    
T  21016067 tccaa 21016063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 386
Target Start/End: Complemental strand, 26195482 - 26195383
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||| |||||||||||||||||||| |||||||||||| |||| ||||||| ||||||| ||||||||||  ||||||||||||||||||||||||    
T  26195482 catgtttgtattggtttcaacaacattttaacttttaaaaagttaaa-tttatcacttttcacaattttccaatgttatatttctatttttatcccctta 26195384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 26672799 - 26672894
Alignment:
Q  295 attggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaat 391  Q
    |||||||||||||||||||||||||||||||| || ||||||||| ||||| | ||||||||||| ||||||||||||||||||||| |||||||||    
T  26672799 attggtttcaacaacattttgacttttaaaaa-attaaatttatccttttttatcattttccaatgctatatttctatttttatccctttatccaat 26672894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 391
Target Start/End: Original strand, 10694811 - 10694911
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 389  Q
    ||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||| ||||||||  |||||||||||| |||||| |||||||||||||    
T  10694811 tttgcattgatttcaacaacattttgacttttaaaaagttaaa-tttatcactttttaccatttttaaatactatatttttattttaatccccttatcca 10694909  T
Q  390 at 391  Q
    ||    
T  10694910 at 10694911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 3174456 - 3174568
Alignment:
Q  286 catgtttgcattggtttcaacaacattt----tgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccc 381  Q
    |||||||| |||||||||||||||||||    |||||||||||||| | |||||||| |||||||||||||||||||||  |||||||||||||||||||    
T  3174456 catgtttgtattggtttcaacaacatttattttgacttttaaaaag-tcaaatttataatttttcaccattttccaatataatatttctatttttatccc 3174554  T
Q  382 cttatccaatgccc 395  Q
    || |||||| ||||    
T  3174555 ctcatccaacgccc 3174568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 34714030 - 34713924
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatac--tatatttctatttttatcccct 383  Q
    |||||||||||||||||||||||||||||||||||||| ||| | |||||||||| ||| ||||||||| ||||||  ||||| ||||||||||||||||    
T  34714030 catgtttgcattggtttcaacaacattttgacttttaagaag-tgaaatttatcactttgcaccatttttcaatactatatatatctatttttatcccct 34713932  T
Q  384 tatccaat 391  Q
    ||| ||||    
T  34713931 tattcaat 34713924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 386
Target Start/End: Complemental strand, 14855493 - 14855394
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||| |||| ||||||||||| |||||||||| | |||| ||||||  ||||||| |||||  |||||||||||||||||||||||||||||    
T  14855493 catgtttgcattagttttaacaacattttaacttttaaaatgttaaa-tttatctcttttcactattttttaatactatatttctatttttatcccctta 14855395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 37433267 - 37433369
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||||||||||||||||||||||||| ||||| |||||| |||| ||||||| |||||| |||||| ||||  ||||| || ||||||||||||||||    
T  37433267 atgtttgcattggtttcaacaacattttaacttt-aaaaagttaaa-tttatcacttttcatcatttttcaatgttatatgtcgatttttatccccttat 37433364  T
Q  387 ccaat 391  Q
    |||||    
T  37433365 ccaat 37433369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 393
Target Start/End: Complemental strand, 5129545 - 5129459
Alignment:
Q  306 caacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 393  Q
    ||||||||||||||||||||| || |||||||||| |||||| |||||| |||| ||||||||| ||||||||||||||||| |||||    
T  5129545 caacattttgacttttaaaaa-attaaatttatcacttttcatcatttttcaatgctatatttcaatttttatccccttatcaaatgc 5129459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 7532829 - 7532893
Alignment:
Q  331 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccc 395  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  7532829 aaattcatcacttttcaccattttccaatacaatatttctatttttatccccttaaccaatgccc 7532893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 31596512 - 31596438
Alignment:
Q  304 aacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||||||||  || || |||||||||||||||||    
T  31596512 aacaatattttgacttttaaaaag-taaaattcatcatttttcaccattttttaacacaatatttctatttttatc 31596438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 385
Target Start/End: Original strand, 26892799 - 26892884
Alignment:
Q  299 gtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||| || ||||| |||||||||||| |||| |||||||||||| || ||||| ||||| ||||||||||||||||||| ||||    
T  26892799 gtttcaataatattttaacttttaaaaagttaaa-tttatcattttttacaatttttcaatattatatttctatttttatcctctta 26892884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 393
Target Start/End: Original strand, 44874369 - 44874431
Alignment:
Q  331 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 393  Q
    |||||||||| ||||||||||||| ||||  ||||||| ||||||||||||||||||||||||    
T  44874369 aaatttatcacttttcaccatttttcaatgttatatttatatttttatccccttatccaatgc 44874431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 399
Target Start/End: Original strand, 35930168 - 35930248
Alignment:
Q  318 ttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    |||||||||| |||| ||||| |||||||| |||||| ||||||||||||| ||||||||||  |||||||||||| |||||    
T  35930168 ttttaaaaagttaaa-tttattatttttcatcatttttcaatactatatttttatttttatcttcttatccaatgctccaag 35930248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 378
Target Start/End: Original strand, 6433548 - 6433635
Alignment:
Q  290 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttat 378  Q
    ||||||||||||| ||||| ||||| |||||||||||| | |||||||| | |||| |||||||| |||| |||||||| |||||||||    
T  6433548 tttgcattggttttaacaatattttaacttttaaaaag-ttaaatttataactttttaccatttttcaatgctatatttttatttttat 6433635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 347
Target Start/End: Complemental strand, 33741586 - 33741523
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttca 347  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||| | |||||||||||||||||    
T  33741586 taacatatttgcattggtttcaacaatattttaacttttaaaaag-ttaaatttatcatttttca 33741523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 392
Target Start/End: Complemental strand, 25636780 - 25636694
Alignment:
Q  304 aacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatg 392  Q
    ||||| ||||||||||| ||||| |||||||| |||||||||  | |||||  ||||| |||||||||||||||||| |||||||||||    
T  25636780 aacaatattttgactttaaaaaa-ataaaattaatcatttttttctattttt-aatacaatatttctatttttatcctcttatccaatg 25636694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 375
Target Start/End: Complemental strand, 25690929 - 25690855
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttt 375  Q
    ||||| || ||||||||||||||||| |||||||| |||||||||| | |||||  ||||  |||||||||||||    
T  25690929 ttcaaaaatattttgacttttaaaaaaataaaattaatcatttttctctattttttaatatgatatttctatttt 25690855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 394
Target Start/End: Complemental strand, 11332888 - 11332796
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgcc 394  Q
    ||||||||  ||||||||||||||||| |||| | | ||| ||| ||||||||  |||||| |||||||||||||||||  |||| ||||||||    
T  11332888 ttcaacaatgttttgacttttaaaaagttaaattct-tcactttacaccatttctcaatacaatatttctatttttatcttcttaaccaatgcc 11332796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 19976545 - 19976488
Alignment:
Q  342 ttttcaccattttccaatactatatttctatttttatccc-cttatccaatgccccaa 398  Q
    ||||||||||||| ||||| |||||||||| ||||||||| ||||||||| |||||||    
T  19976545 ttttcaccatttttcaatattatatttctacttttatcccacttatccaaagccccaa 19976488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 379
Target Start/End: Complemental strand, 34421412 - 34421335
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    ||||||||  |||||| |||||||||| | || ||| |||||||||||||||| | ||||| || ||||||||||||||    
T  34421412 ttcaacaatgttttgatttttaaaaagttgaatttt-tcatttttcaccatttccaaatacaatgtttctatttttatc 34421335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 30351592 - 30351637
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaa 332  Q
    ||||||||||||| |||||||| ||||| |||||||||||| ||||    
T  30351592 atgtttgcattggattcaacaatattttaacttttaaaaagttaaa 30351637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 6841755 - 6841707
Alignment:
Q  337 atcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||| |||||| ||||||| ||||| |||||||||||||||||| ||||    
T  6841755 atcacttttcatcattttctaatacaatatttctatttttatcctctta 6841707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 371
Target Start/End: Complemental strand, 39972260 - 39972177
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttcta 371  Q
    ||||||||||||  || |||||  |||| |||||||||||| | ||||| |||| |||||||||||| ||||||| | |||||||    
T  39972260 atgtttgcattgaattgaacaattttttaacttttaaaaag-tcaaattcatcacttttcaccatttcccaatacaacatttcta 39972177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 323
Target Start/End: Original strand, 41689098 - 41689126
Alignment:
Q  295 attggtttcaacaacattttgacttttaa 323  Q
    |||||||||||||||||||||||||||||    
T  41689098 attggtttcaacaacattttgacttttaa 41689126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 6866915 - 6867026
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||| |||||||||||||||||||||||||| | |||| ||||||| |||||||||||||| ||| |||||||| ||||||||||||||||    
T  6866915 catgtttgcattgatttcaacaacattttgacttttaaaaggttaaa-tttatcacttttcaccattttcaaatgctatatttttatttttatcccctta 6867013  T
Q  386 tccaatgccccaa 398  Q
    |||||||||||||    
T  6867014 tccaatgccccaa 6867026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 12191493 - 12191604
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||| |||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||| ||||| |||||||||||||||||||| ||||    
T  12191493 catgtttgtattgatttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccatttaccaatgctatatttctatttttatccactta 12191591  T
Q  386 tccaatgccccaa 398  Q
    |||||||| ||||    
T  12191592 tccaatgcgccaa 12191604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 10855443 - 10855544
Alignment:
Q  297 tggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgcccc 396  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| |||||| |||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  10855443 tggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcatcatttttcaatattatatttctatttttatccccttatcaaatgcccc 10855541  T
Q  397 aag 399  Q
    |||    
T  10855542 aag 10855544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 5578274 - 5578386
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    |||||||||||| |||||||||| |||||||||||||||||| |||| ||||||| || |||  ||||| |||| ||||||||||||||||||||||| |    
T  5578274 catgtttgcatttgtttcaacaatattttgacttttaaaaagttaaa-tttatcaattctcattatttttcaatgctatatttctatttttatcccctca 5578372  T
Q  386 tccaatgccccaag 399  Q
    ||||||||| ||||    
T  5578373 tccaatgcctcaag 5578386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 286 - 376
Target Start/End: Complemental strand, 7875290 - 7875201
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt 376  Q
    ||||| ||||||||||||||||| |||||||||||||||||| | |||||||||| |||||| ||||||||||| ||||||||||||||||    
T  7875290 catgtctgcattggtttcaacaatattttgacttttaaaaag-ttaaatttatcacttttcatcattttccaatgctatatttctattttt 7875201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 309 - 399
Target Start/End: Complemental strand, 29692427 - 29692338
Alignment:
Q  309 cattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    |||||||||| |||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||    
T  29692427 cattttgactcttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatccatttatccaatgccccaag 29692338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 399
Target Start/End: Complemental strand, 8324216 - 8324101
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||  |||||||||||||||||||| | |||||||||| |||| ||||||||||||||| ||||  |||| |||| ||||||||||||||  |    
T  8324216 taacatgtttatattggtttcaacaacattttaatttttaaaaagttaaa-tttatcatttttcacaatttctcaatgctatgtttctatttttatcttc 8324118  T
Q  383 ttatccaatgccccaag 399  Q
    |||| ||||||||||||    
T  8324117 ttattcaatgccccaag 8324101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 26572186 - 26572079
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||| ||||| ||||| ||||||||||  || |||||||||| |||| | ||||||||     ||||||||||||||||||||||||    
T  26572186 catgtttgcattggttttaacaatattttaacttttaaaat-attaaatttatcactttttatcattttcc-----tatatttctatttttatcccctta 26572093  T
Q  386 tccaatgccccaag 399  Q
    ||||||||||||||    
T  26572092 tccaatgccccaag 26572079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 394
Target Start/End: Complemental strand, 16437691 - 16437592
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||| ||||| |||||||||||| ||||         ||||||||||||||||||  ||||||||||||||||||| ||||    
T  16437691 catgtttgcattggtttcaacaatatttttacttttaaaaagttaaa---------ttttcaccattttccaatgttatatttctatttttatccactta 16437601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 283 - 398
Target Start/End: Complemental strand, 7274326 - 7274212
Alignment:
Q  283 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 382  Q
    ||||||||||| |||| ||||||||||||||| |||||||||| | |||| ||||||| |||||  |||||||||||  ||||||||||| ||||| |||    
T  7274326 taacatgtttgtattgatttcaacaacattttaacttttaaaatgttaaa-tttatcacttttcgtcattttccaatgttatatttctatatttattccc 7274228  T
Q  383 ttatccaatgccccaa 398  Q
    || ||||||| |||||    
T  7274227 ttgtccaatgtcccaa 7274212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 289 - 395
Target Start/End: Original strand, 28014638 - 28014743
Alignment:
Q  289 gtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcc 388  Q
    ||||||||||| |||||||| ||||| |||||||||||| | ||| | ||||||||||||||||| ||||||| ||||||||| ||||| || |||| ||    
T  28014638 gtttgcattggattcaacaatattttaacttttaaaaag-tcaaactcatcatttttcaccatttcccaatacaatatttctaattttaccctcttaacc 28014736  T
Q  389 aatgccc 395  Q
    |||||||    
T  28014737 aatgccc 28014743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 376
Target Start/End: Complemental strand, 7880536 - 7880447
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt 376  Q
    ||||| || ||| |||||||||| |||||||||||||||||| |||| ||||||| |||||| ||||||| ||| ||||||||||||||||    
T  7880536 catgtctgtattagtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcatcattttctaatgctatatttctattttt 7880447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 32786069 - 32786113
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagata 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32786069 catgtttgcattggtttcaacaacattttgacttttaaaaagata 32786113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 379
Target Start/End: Complemental strand, 27127601 - 27127524
Alignment:
Q  301 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    |||||||| || ||||||||||||||| |||| || |||||||||||||||||  |||||| |||||||||||||||||    
T  27127601 ttcaacaatatcttgacttttaaaaagttaaa-ttcatcatttttcaccatttctcaatacaatatttctatttttatc 27127524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 380
Target Start/End: Original strand, 12175561 - 12175652
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcc 380  Q
    |||||||||||||||| || ||| |||| |||||||||||| |||| ||||||| |||| | |||||| ||||||||||||| |||||||||||    
T  12175561 atgtttgcattggttttaataac-ttttaacttttaaaaagttaaa-tttatcagtttttatcatttttcaatactatatttatatttttatcc 12175652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 399
Target Start/End: Original strand, 32786260 - 32786327
Alignment:
Q  331 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 399  Q
    |||||||||  ||||||||||||||||||  ||||||||||||||||| |||||||||||| |||||||    
T  32786260 aaatttatctcttttcaccattttccaatgttatatttctatttttat-cccttatccaataccccaag 32786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 31220435 - 31220325
Alignment:
Q  287 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 386  Q
    |||||||||||   ||||| |||||||| |||||||||||| |||| || |||| |||| |||||||| ||| || ||||||| ||||  |||| |||||    
T  31220435 atgtttgcattttattcaataacattttaacttttaaaaagttaaa-ttcatcactttttaccatttttcaaaacgatatttccatttccatcctcttat 31220337  T
Q  387 ccaatgccccaa 398  Q
    ||||||||||||    
T  31220336 ccaatgccccaa 31220325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 12769254 - 12769294
Alignment:
Q  337 atcatttttcaccattttccaatactatatttctattttta 377  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  12769254 atcatttttcaccatttttcaatattatatttctattttta 12769294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 20775084 - 20775010
Alignment:
Q  304 aacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    ||||| ||||| || ||||||||||| |||||||| ||||||||| ||||| |||| | ||||||| |||||||||    
T  20775084 aacaatattttaacctttaaaaagat-aaatttattatttttcacaatttttcaatgcaatatttcaatttttatc 20775010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 22414676 - 22414598
Alignment:
Q  310 attttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaat 391  Q
    |||||||||||||||||| ||||| | ||| ||||||| ||||||| ||||| |||||  | ||||||||| ||||||||||    
T  22414676 attttgacttttaaaaagttaaaa-tcatcttttttcatcattttctaatacaatatt--tttttttatcctcttatccaat 22414598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 378
Target Start/End: Complemental strand, 12402909 - 12402842
Alignment:
Q  310 attttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttat 378  Q
    ||||| |||||||||||  ||||||  |||||||||||||||||   ||||| ||||||||||||||||    
T  12402909 attttaacttttaaaaaactaaaatc-atcatttttcaccatttcttaatacaatatttctatttttat 12402842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 74; Significance: 9e-34; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 16880 - 16773
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||| |||||||||||||||||| | | |||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  16880 catgtttgcattggtttcaacaatattttgacttttaaaaag-ttacatttatcatttttcactatttt-caatgctatatttctatttttatcccctta 16783  T
Q  386 tccaatgccc 395  Q
    ||||||||||    
T  16782 tccaatgccc 16773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 27048 - 26941
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||| |||||||||||||||||| | | |||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  27048 catgtttgcattggtttcaacaatattttgacttttaaaaag-ttacatttatcatttttcactatttt-caatgctatatttctatttttatcccctta 26951  T
Q  386 tccaatgccc 395  Q
    ||||||||||    
T  26950 tccaatgccc 26941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 37214 - 37107
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 385  Q
    ||||||||||||||||||||||| |||||||||||||||||| | | |||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  37214 catgtttgcattggtttcaacaatattttgacttttaaaaag-ttacatttatcatttttcactatttt-caatgctatatttctatttttatcccctta 37117  T
Q  386 tccaatgccc 395  Q
    ||||||||||    
T  37116 tccaatgccc 37107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 392241 - 392162
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatat 366  Q
    ||||||||||| |||||||||||||||||||||||||||||| | |||||||||| |||| |||||||| |||| ||||||    
T  392241 catgtttgcatcggtttcaacaacattttgacttttaaaaag-ttaaatttatcactttttaccatttttcaatgctatat 392162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 398
Target Start/End: Complemental strand, 4335 - 4268
Alignment:
Q  331 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaa 398  Q
    |||||||||| ||||||| |||||||||| |||||||| ||||||||||||  ||||||||| |||||    
T  4335 aaatttatcacttttcacaattttccaatgctatatttttatttttatccctctatccaatgtcccaa 4268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 4755 - 4709
Alignment:
Q  286 catgtttgcattggtttcaacaacattttgacttttaaaaagataaa 332  Q
    ||||||||||||  |||||||||||| ||||||||||||||| ||||    
T  4755 catgtttgcattaatttcaacaacatattgacttttaaaaagttaaa 4709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 39614 - 39679
Alignment:
Q  313 ttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 379  Q
    ||||||||||||||| |||| | | ||| ||||||| |||||||||||| || ||||||||||||||    
T  39614 ttgacttttaaaaagttaaattct-tcagttttcactattttccaatacaatgtttctatttttatc 39679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 392
Target Start/End: Complemental strand, 37441 - 37393
Alignment:
Q  344 ttcaccattttccaatactatatttctatttttatccccttatccaatg 392  Q
    |||| |||||| |||||| ||||||||||||| |||| |||||||||||    
T  37441 ttcatcatttttcaatacaatatttctattttaatcctcttatccaatg 37393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 37483 - 37428
Alignment:
Q  291 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttca 347  Q
    ||||||||| ||||| ||||||||||||||| ||||| | ||||| |||||||||||    
T  37483 ttgcattggattcaataacattttgacttttgaaaag-ttaaattcatcatttttca 37428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University