View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10458_low_13 (Length: 293)
Name: NF10458_low_13
Description: NF10458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10458_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 17 - 283
Target Start/End: Original strand, 19418327 - 19418596
Alignment:
| Q |
17 |
aaataaaagtattttggcatttatcattggtccatctggaagttat----gtattgatctgatctttttcgggaagataataatgaatgtatagccactg |
112 |
Q |
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| T |
19418327 |
aaataaaagtattttggcacttatcattggtccatctggaagttatatatgtattgatctgatctttttcgggaagataataatgaatgtatagccactg |
19418426 |
T |
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| Q |
113 |
gtagagagtaattctcctcttgaaaatgggttttaaaatatttaaggtaatccctatccattttgagtggttagtggaacctttattctcctcgagtcat |
212 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |
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| T |
19418427 |
gtagagagtaactctcctcttgaaaatgggttttaaaatatttaaggtaatccctatccattttgagtggttagtggaacctttattctcctctaatcat |
19418526 |
T |
|
| Q |
213 |
ttatagaggtttgtatggttgttaaggatggagnnnnnnngtgtgtttggtacttgatgttgtcacctttg |
283 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
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| T |
19418527 |
ttatagaggtttgtatggttgttaaggatggagttttttt-tgtgtttggcgcttgatgttgtcacctttg |
19418596 |
T |
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