View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10458_low_14 (Length: 273)
Name: NF10458_low_14
Description: NF10458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10458_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 43394461 - 43394208
Alignment:
| Q |
1 |
tggtggtgtgcttaagagtttggtatctggtgctaaaaggggtttctctgatgctattactgatggaagttctgggaagtgggttttgtctggaaatggt |
100 |
Q |
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| T |
43394461 |
tggtggtgtgcttaagagtttggtatctggtgctaaaaggggtttctctgatgctattactgatggtggttctgggaagtgggttttgtctggaaatggt |
43394362 |
T |
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| Q |
101 |
ggatctgaagtggggttgtgtaaagatggaaacttgttctctcctaaagctaaaggtgttggtgaatgtaataaccaacaaaaccctttctctgcttcag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43394361 |
ggatctgaagtggggttgtgtaaagatggaaacttgttctctcctaaagctaaaggtgttggtgaatgtaataaccaacaaaaccctttctctgcttcag |
43394262 |
T |
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| Q |
201 |
ttgttgttaaagaaactgttacacactctccaaagcctttgcatgataacaaac |
254 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43394261 |
ttgttgttaaagaaactgttacacactctccaaagcctttgcatgataacaaac |
43394208 |
T |
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