View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10458_low_16 (Length: 257)
Name: NF10458_low_16
Description: NF10458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10458_low_16 |
 | |
|
| [»] scaffold1668 (1 HSPs) |
| | |
|
| [»] scaffold0066 (1 HSPs) |
| | |
|
| [»] scaffold0006 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 19)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 39468394 - 39468161
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaataaaatccatgcccataattcatcaattcaatgaactactccattctcattcctc |
116 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39468394 |
acatcatagtttgtattggtgtaagttttgagttcgaattcacaacagaatccatgcccataattcatcaattcaatgaactactccattctcattcctc |
39468295 |
T |
|
| Q |
117 |
tcatcttgccgccatcattgtttcttcttcaatctgcttttacatattctcttttgtctaatccctttgattttgcttttatcatcttcttgaatctgc- |
215 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
39468294 |
tcatcttgccgccatcattgttt---cttcaatctgcttttacatattctcctttgtctaatcgctttgatattgcttttatcatcttcttgaatctgct |
39468198 |
T |
|
| Q |
216 |
tttttcatattctctcttgtctaatccctttgcttct |
252 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
39468197 |
ttttttatattctctcttgtctaatccctttgattct |
39468161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 40147564 - 40147608
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40147564 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
40147608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 32637146 - 32637192
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaata |
63 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
32637146 |
acatcatagtttgtattggtgtgagttttgaatccgaattcacaata |
32637192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 534081 - 534125
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
534081 |
acatcatagtttctattggtgtgagttttgagtccgaattcacaa |
534125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 3075595 - 3075551
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
3075595 |
acatcatagtttgtattggtgtgagtttttagtccgaattcacaa |
3075551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 30682768 - 30682724
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
30682768 |
acatcatagtttgtattggtgtgagttttgagtccgtattcacaa |
30682724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 538343 - 538389
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaata |
63 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
538343 |
acatcatagtttatattggtgtgagttttgagtctgaattcacaata |
538389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 13488523 - 13488567
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
13488523 |
acatcatattttgtattggtgtgagatttgagtccgaattcacaa |
13488567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 28750501 - 28750457
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
28750501 |
acatcataatttgtattggtgtgagttttgagtccaaattcacaa |
28750457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 42426081 - 42426037
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
42426081 |
acatcatagtttgtatttgtgtgagttttgagttcgaattcacaa |
42426037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 5887278 - 5887232
Alignment:
| Q |
19 |
atcatagtttgtattggtgtgagttttgagtccgaattcacaataaaa |
66 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
5887278 |
atcatagtttgtattggtgtga-ttttgagtccgaattcacaacaaaa |
5887232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 42428276 - 42428237
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaatt |
56 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
42428276 |
acatcatagtttgtattggtgtgagttttgagttcgaatt |
42428237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 19806685 - 19806727
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
19806685 |
acatcatagtttgtattggtg--agttttgagtccgaattcacaa |
19806727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 31183296 - 31183344
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaataaaa |
66 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
31183296 |
acatcatggtttgtattggtgtga-ttttgagtccgaattcacaacaaaa |
31183344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 38747307 - 38747351
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
38747307 |
acatcatagtttgtattggtgtgaaatttgagtccaaattcacaa |
38747351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 13240074 - 13240117
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||| |||||| |||||||| ||||||||||| |
|
|
| T |
13240074 |
acatcatagtttgtattagtgtga-ttttgagttcgaattcacaa |
13240117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 16649680 - 16649637
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||| ||||||||||| |
|
|
| T |
16649680 |
acatcatagtttgtattggtatga-ttttgagttcgaattcacaa |
16649637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 33832001 - 33832044
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||| |||| | |||||||||||||||||||| |
|
|
| T |
33832001 |
acatcatagtttgtatttgtgtaa-ttttgagtccgaattcacaa |
33832044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 39468213 - 39468157
Alignment:
| Q |
139 |
tcttcttcaatctgcttttac-atattctcttttgtctaatccctttgattttgctt |
194 |
Q |
| |
|
||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
39468213 |
tcttcttgaatctgctttttttatattctctcttgtctaatccctttgattctgctt |
39468157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 19)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 52467203 - 52467157
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaata |
63 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52467203 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaata |
52467157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 12739399 - 12739355
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12739399 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
12739355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 26175482 - 26175438
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26175482 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
26175438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 12743770 - 12743730
Alignment:
| Q |
21 |
catagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12743770 |
catagtttgtattggtgtgagttttgagtccgaattcacaa |
12743730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 36994852 - 36994896
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
36994852 |
acatcatagtttgtattggtgtgagttttgagtcagaattcacaa |
36994896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 37740948 - 37740992
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
37740948 |
acatcatagtttgtattggtgtgagttttgagtccgaatttacaa |
37740992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 9927304 - 9927260
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
9927304 |
acatcatagtttatattggtgcgagttttgagtccgaattcacaa |
9927260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 48893488 - 48893445
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
48893488 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
48893445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 56178481 - 56178438
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
56178481 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
56178438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 45687032 - 45686984
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaataaaa |
66 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||| |||| |
|
|
| T |
45687032 |
acatcatagtttgtattggtgtga-ttttgagtctgaattcacaacaaaa |
45686984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 52095204 - 52095164
Alignment:
| Q |
20 |
tcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
52095204 |
tcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
52095164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 36463241 - 36463198
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
36463241 |
acatcatagtttgtattagtgtga-ttttgagtccgaattcacaa |
36463198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 46147241 - 46147197
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||| |||||||||||||||||| | |||||||||| |
|
|
| T |
46147241 |
acatcatagtttgcattggtgtgagttttgaggcggaattcacaa |
46147197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 50262533 - 50262489
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
50262533 |
acatcatagtttgtattggtgtgaaatttgagtctgaattcacaa |
50262489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 52082508 - 52082465
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
52082508 |
acatcataatttgtattggtgtga-ttttgagtccgaattcacaa |
52082465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 54199753 - 54199710
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
54199753 |
acatcatcgtttgtattggtgtga-ttttgagtccgaattcacaa |
54199710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 47038261 - 47038219
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcaca |
60 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
47038261 |
acatcatagtttgtattggtgtga-ttttgagtccaaattcaca |
47038219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 48143371 - 48143415
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtcc-gaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
48143371 |
acatcatagtttgtattggtgtga-ttttgagtccggaattcacaa |
48143415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 41639755 - 41639799
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||| |||||||||| |
|
|
| T |
41639755 |
acatcatagtttgtattgatgtgaaatttgagtctgaattcacaa |
41639799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 21)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 28220072 - 28220022
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaataaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
28220072 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaacaaaat |
28220022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 37559711 - 37559666
Alignment:
| Q |
16 |
gacatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
37559711 |
gacatcatagtttatattggtgtgagttttgagtccgaattcacaa |
37559666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 28223267 - 28223223
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28223267 |
acatcatagtttgtattggtctgagttttgagtccgaattcacaa |
28223223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 834015 - 833972
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
834015 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
833972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 8550629 - 8550586
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
8550629 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
8550586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 13137826 - 13137782
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
13137826 |
acatcataatttgtattggtgtgagttttgagtccgaatttacaa |
13137782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 30476292 - 30476248
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
30476292 |
acattatagtttgtattggtgtgagttttgagttcgaattcacaa |
30476248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 37503407 - 37503364
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
37503407 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
37503364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 40122045 - 40122003
Alignment:
| Q |
18 |
catcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
40122045 |
catcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
40122003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 19752986 - 19753030
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
19752986 |
acatcatagtttgtattggtgtgaaatttgagtctgaattcacaa |
19753030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 28265404 - 28265365
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattc |
57 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
28265404 |
acatcatagtttgtattggtgtga-ttttgagtccgaattc |
28265365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 45644203 - 45644160
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
45644203 |
acatcatagtttgtatttgtgtga-ttttgagtccgaattcacaa |
45644160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 4552493 - 4552454
Alignment:
| Q |
18 |
catcatagtttgtattggtgtgagttttgagtccgaattc |
57 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4552493 |
catcatagtttgtattggtgtgaaatttgagtccgaattc |
4552454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 44455485 - 44455531
Alignment:
| Q |
19 |
atcatagtttgtattggtgtgagttttgagtccgaattcacaataaaa |
66 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||||||||||| |||| |
|
|
| T |
44455485 |
atcatagtttgtattggtgtga-ttttgagtacgaattcacaacaaaa |
44455531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 1833833 - 1833874
Alignment:
| Q |
19 |
atcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
1833833 |
atcatagtttgtattggtgtga-tattgagtccgaattcacaa |
1833874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 3846966 - 3846923
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||| || ||| |||||||||||||||||||| |
|
|
| T |
3846966 |
acatcatagtttgtattagtatga-ttttgagtccgaattcacaa |
3846923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 10925549 - 10925588
Alignment:
| Q |
21 |
catagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
10925549 |
catagtttgtattgttgtga-ttttgagtccgaattcacaa |
10925588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 13659196 - 13659153
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||| ||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
13659196 |
acattatagtttgtattgatgtga-ttttgagtccgaattcacaa |
13659153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 31659561 - 31659604
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||| ||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
31659561 |
acatcatattttatattggtgtga-ttttgagtccgaattcacaa |
31659604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 41361233 - 41361276
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
41361233 |
acatcatagttt-tattggttagagttttgagtccgaattcacaa |
41361276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 49918673 - 49918716
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||| |||| |
|
|
| T |
49918673 |
acatcatagtttgtattggtgtga-ttttgagtctgaatttacaa |
49918716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 15213109 - 15213153
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15213109 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
15213153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 41366463 - 41366417
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaataa |
64 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
41366463 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaataa |
41366417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 3303516 - 3303474
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcac |
59 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3303516 |
acatcatagtttgtattggtgtgagatttgagtccgaattcac |
3303474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 4743073 - 4743029
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4743073 |
acattatagtttgtattggtgtgagatttgagtccgaattcacaa |
4743029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 6599288 - 6599331
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
6599288 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
6599331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 6674741 - 6674784
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
6674741 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
6674784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 5689590 - 5689633
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
5689590 |
acatcatagtttgtattggtgtga-ttttgagtcggaattcacaa |
5689633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 12702476 - 12702433
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
12702476 |
acatcatagtttgtattgatgtga-ttttgagtccgaattcacaa |
12702433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 30143663 - 30143706
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
30143663 |
acatcatagtttgtattggtgtga-ttttgagtctgaattcacaa |
30143706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 43036745 - 43036786
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattca |
58 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
43036745 |
acatcattttttgtattggtgtgagttttgagtccaaattca |
43036786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 4731981 - 4732024
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||| |||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
4731981 |
acatcattgtttgtattggtgtga-ttttgagttcgaattcacaa |
4732024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 19491548 - 19491505
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
19491548 |
acatcatagttt-tattggttagagttttgagtccgaattcacaa |
19491505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 27)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 6430450 - 6430494
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6430450 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
6430494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 14069679 - 14069635
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14069679 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
14069635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 14379707 - 14379663
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14379707 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
14379663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 18126969 - 18127013
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18126969 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
18127013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 23555364 - 23555408
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23555364 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
23555408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 26417641 - 26417683
Alignment:
| Q |
19 |
atcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26417641 |
atcatagtttgtattggtgtgagttttgagtccgaattcacaa |
26417683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 43864567 - 43864609
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcac |
59 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43864567 |
acatcatagtttgtattggtgtgagttttgagtccgaattcac |
43864609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 31732814 - 31732770
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
31732814 |
acatcatagtttgtactggtgtgagttttgagtccgaattcacaa |
31732770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 47675982 - 47675938
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
47675982 |
acatcatagtttgtattggtgtgagttttgtgtccgaattcacaa |
47675938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 41648859 - 41648811
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaataaaa |
66 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
41648859 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaaaa |
41648811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 47673790 - 47673749
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattca |
58 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
47673790 |
acatcatagtttgtattggtgtgagttttgtgtccgaattca |
47673749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 2360818 - 2360774
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
2360818 |
acatcatagtttgtattggtgtgaattttgagtccaaattcacaa |
2360774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 4510385 - 4510341
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4510385 |
acatcatagtttgtattggtgtgaaatttgagtccgaattcacaa |
4510341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 4512227 - 4512183
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4512227 |
acatcatagtttgtattggtgtgaaatttgagtccgaattcacaa |
4512183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 19502501 - 19502545
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
19502501 |
acatcatagtttgtattagtgtgagttttgagtctgaattcacaa |
19502545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 38671070 - 38671027
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
38671070 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
38671027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 41317284 - 41317240
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
41317284 |
acatcatagtttgtattggtgtgagatttgagttcgaattcacaa |
41317240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 1113975 - 1114019
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||| |||||||||||| || |||||||||| |
|
|
| T |
1113975 |
acatcatagtttgtattgatgtgagttttgattcggaattcacaa |
1114019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 4586484 - 4586528
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
4586484 |
acatcatagtttacattggtgtgagatttgagtccgaattcacaa |
4586528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 48489754 - 48489797
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
48489754 |
acatcatagttggtattggtgtga-ttttgagtccgaattcacaa |
48489797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 4508540 - 4508497
Alignment:
| Q |
20 |
tcatagtttgtattggtgtgagttttgagtccgaattcacaata |
63 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
4508540 |
tcatagtttgtattggtgtgaaatttgagaccgaattcacaata |
4508497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 22270275 - 22270316
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattca |
58 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
22270275 |
acatcatagtttgtattgctgtgaaatttgagtccgaattca |
22270316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 27348140 - 27348188
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaataaaa |
66 |
Q |
| |
|
|||||||| |||||||| |||||| |||||||||||||||||||| |||| |
|
|
| T |
27348140 |
acatcataatttgtatttgtgtga-ttttgagtccgaattcacaacaaaa |
27348188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 25616178 - 25616221
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| || |||||||| |
|
|
| T |
25616178 |
acatcatagtttgtattggtgtga-ttttgagtacgtattcacaa |
25616221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 30814724 - 30814768
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||| |||||| |||||||| ||||||||||||||||||| |
|
|
| T |
30814724 |
acatcatattttgtactggtgtgaaatttgagtccgaattcacaa |
30814768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 31105245 - 31105202
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||| ||||||||||||||||| || ||||||||||| |
|
|
| T |
31105245 |
acatcatagttt-tattggtgtgagttttgtgttcgaattcacaa |
31105202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 36146257 - 36146214
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||| |||| | |||||||||||||||||||| |
|
|
| T |
36146257 |
acatcatagtttgtatttgtgtaa-ttttgagtccgaattcacaa |
36146214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 602949 - 602905
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
602949 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
602905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 26954136 - 26954093
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
26954136 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
26954093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 14521523 - 14521480
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
14521523 |
acatcatagtttc-attggtgtgagttttgagtccgaattcacaa |
14521480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 3038772 - 3038727
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaata |
63 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||| ||||||||||||| |
|
|
| T |
3038772 |
acatcatagtttgtattggtctga-ttttgagttcgaattcacaata |
3038727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 17758355 - 17758400
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagt-ccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
17758355 |
acatcatagtttgtattggtgtgaaatttgagtcccgaattcacaa |
17758400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 28137253 - 28137213
Alignment:
| Q |
20 |
tcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
28137253 |
tcatagtttgtattggtgtga-ttttgagaccgaattcacaa |
28137213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 21)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 4160105 - 4160061
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4160105 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
4160061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 29813384 - 29813428
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29813384 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
29813428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 29196235 - 29196191
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
29196235 |
acatcatagtttgtattggtgtgagatttgagtccgaattcacaa |
29196191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 5236302 - 5236259
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
5236302 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
5236259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 22834852 - 22834809
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22834852 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
22834809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 23391758 - 23391714
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
23391758 |
acatcatagtttgtattggtgtgagttttgtgttcgaattcacaa |
23391714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 23410177 - 23410133
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
23410177 |
acatcatagtttgtattgatgtgagttttgtgtccgaattcacaa |
23410133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 39153210 - 39153170
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattc |
57 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
39153210 |
acatcatagtttgtattggtgtgagttttgagcccgaattc |
39153170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 9666313 - 9666272
Alignment:
| Q |
19 |
atcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
9666313 |
atcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
9666272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 29811193 - 29811235
Alignment:
| Q |
19 |
atcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
29811193 |
atcatattttgtattggtgtgagttttgagttcgaattcacaa |
29811235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 761167 - 761209
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
761167 |
acatcatagtttgtattggtgtga--tttgagtccgaattcacaa |
761209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 44700328 - 44700280
Alignment:
| Q |
18 |
catcatagtttgtattggtgtgagttttgagtccgaattcacaataaaat |
67 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| || ||||| |
|
|
| T |
44700328 |
catcatagtttgtattggtgtga-ttttgagtccgaattcaaaacaaaat |
44700280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 40734820 - 40734863
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
40734820 |
acatcatagtttgtattggtgtga-ttttgagaccgaattcacaa |
40734863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 51399137 - 51399180
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
51399137 |
acatcatagtttgtattggtatga-ttttgagtccgaattcacaa |
51399180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 61
Target Start/End: Complemental strand, 21350843 - 21350813
Alignment:
| Q |
31 |
attggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
21350843 |
attggtgtgagttttgagtccgaattcacaa |
21350813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 6095437 - 6095392
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagt-ccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
6095437 |
acatcatagtttgtattggtgtgaaatttgagtcccgaattcacaa |
6095392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 7764788 - 7764832
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtcc-gaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
7764788 |
acatcatagtttgtattggtgt-agttttgagtccggaattcacaa |
7764832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 44330950 - 44330983
Alignment:
| Q |
28 |
tgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |
|
|
| T |
44330950 |
tgtactggtgtgagttttgagtccgaattcacaa |
44330983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 31314763 - 31314806
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| | |||||||| |
|
|
| T |
31314763 |
acatcatagtttgtattggtgtga-ttttgagtcggtattcacaa |
31314806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 32891413 - 32891456
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
32891413 |
acatcatagtttc-attggtgtgagttttgagtccgaagtcacaa |
32891456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 40913608 - 40913644
Alignment:
| Q |
25 |
gtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |
|
|
| T |
40913608 |
gtttgtattggtgtgaaatttgagtccgaattcacaa |
40913644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 17)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 11690810 - 11690854
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11690810 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
11690854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 723592 - 723549
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
723592 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
723549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 11151441 - 11151397
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
11151441 |
acatcatagtttgtattggtatgagttttgagttcgaattcacaa |
11151397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 24885908 - 24885951
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
24885908 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
24885951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 34139618 - 34139575
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
34139618 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
34139575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 36317859 - 36317815
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
36317859 |
acatcattgtttgtattggtgtgagttttgagtccaaattcacaa |
36317815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 36987920 - 36987877
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
36987920 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
36987877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 42362668 - 42362711
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
42362668 |
acatcatagtttgtattggtgtga-ttttgagtccgaattcacaa |
42362711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 2334263 - 2334220
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
2334263 |
acatcatagtttgtattggtgtga-ttttgagtctgaattcacaa |
2334220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 6594849 - 6594806
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
6594849 |
acatcatagtttgtattggtgtga-ttttgagtccaaattcacaa |
6594806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 17057214 - 17057171
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
17057214 |
acatcatattttgtattggtgtga-ttttgagtccgaattcacaa |
17057171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 17085197 - 17085154
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
17085197 |
acatcatattttgtattggtgtga-ttttgagtccgaattcacaa |
17085154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 29868191 - 29868235
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
29868191 |
acatcatagtttgtattgctgtgaaatttgagtccgaattcacaa |
29868235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 33162299 - 33162256
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
33162299 |
acatcatagtttgtattgatgtga-ttttgagtccgaattcacaa |
33162256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 36773881 - 36773924
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
36773881 |
acatcatagtttgtattggtgtga-ttttgaatccgaattcacaa |
36773924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 14633673 - 14633630
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||| |||||| |
|
|
| T |
14633673 |
acatcatagtttgtattggtgtga-ttttgagtctgaaatcacaa |
14633630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 39285157 - 39285200
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||||| |||||||| |||||||| ||||||||||||||| |
|
|
| T |
39285157 |
acatcatagtt-gtattggtatgagttttaagtccgaattcacaa |
39285200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1668 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1668
Description:
Target: scaffold1668; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 1347 - 1303
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
||||||||| |||||||||||||||||||| || ||||||||||| |
|
|
| T |
1347 |
acatcatagattgtattggtgtgagttttgtgttcgaattcacaa |
1303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0066 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0066
Description:
Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 20260 - 20218
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
20260 |
acatcatagtttgtattggtatgag--ttgagtccgaattcacaa |
20218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 148957 - 148914
Alignment:
| Q |
17 |
acatcatagtttgtattggtgtgagttttgagtccgaattcacaa |
61 |
Q |
| |
|
|||| ||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
148957 |
acattatagtttgtattgatgtga-ttttgagtccgaattcacaa |
148914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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