View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10458_low_6 (Length: 490)
Name: NF10458_low_6
Description: NF10458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10458_low_6 |
 |  |
|
| [»] scaffold0097 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 438; Significance: 0; HSPs: 19)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 1 - 462
Target Start/End: Original strand, 20351535 - 20351996
Alignment:
| Q |
1 |
tgaggaggagcacagactcgacatagttggctcttgcaatggattgctctgcttgtttggcaatactttcacttccaatttcgacattgagacgtggatt |
100 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20351535 |
tgaggacgagcacatactcgacatagttggctcttgcaatggattgctctgcttgtttggcaatactttcacttccaatttcgacattgagacgtggatt |
20351634 |
T |
 |
| Q |
101 |
cgcttttggaacccagccacaaggacaatatctgaaaaactaggatatactattcataacaacctacatttccatcataatttgacgttcggttacgtta |
200 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
20351635 |
cgcttttggaaccaagccacaaggacaatatctgaaaaactaggatatactattcataacaagctacatttccatcataatttgacgtttggttacgtta |
20351734 |
T |
 |
| Q |
201 |
attcaaccgacacttataaggtggcgtatttagttccaaatacaaataatgtgcatgttttaagtttgggcgataatgtttggagaaatattcaaaattc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20351735 |
attcaaccgacacttataaggtggcgtatttagttccaaatacaaataatgtgcatgttttaagtttgggcgataatgtttggagaaatattcaaaattc |
20351834 |
T |
 |
| Q |
301 |
tcccgtggatcatggttattcgatgaatgttgtgaacctacatgagagtattaattggctggaaattcgcgattacaactctcattatgaccgcaacaat |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20351835 |
tcccgtggatcatggttattcgatgaatgttgtgaacctacatgagattattaattggctggaaattcgcgattacaactctcattatgaccgcaacaat |
20351934 |
T |
 |
| Q |
401 |
attactatcaagcaatttgtgatcatttctcttgatttggacactgaaacgcattctctgct |
462 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20351935 |
attactatcaagcaatttgtgatcatttctcttgatttggacactgaaacgcattctctgct |
20351996 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 17 - 458
Target Start/End: Complemental strand, 20361817 - 20361375
Alignment:
| Q |
17 |
ctcgacatagttggctcttgcaatggattgctctgcttgtttggcaatactttcacttccaatttcgacattgagacgtggattcgcttttggaacccag |
116 |
Q |
| |
|
|||||| |||||| ||||||||||||||| ||||||||||||||| || ||||| || |||||||||| |||||||||||||||| ||||||||| || |
|
|
| T |
20361817 |
ctcgacctagttgtctcttgcaatggatttctctgcttgtttggccattctttccctaccaatttcgagattgagacgtggattcaaatttggaaccaag |
20361718 |
T |
 |
| Q |
117 |
ccacaaggacaatatctgaaaaactaggatatactattcataacaacctacatttccatcataatttgacgttcggttacgttaattcaaccgacactta |
216 |
Q |
| |
|
|||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||| |
|
|
| T |
20361717 |
ccacgaggacaatatttggaaaactaggatatactattcataacaacctacatttccatcataatttgacgtttggttatgttaattcaatcgacgctta |
20361618 |
T |
 |
| Q |
217 |
taaggtggcgtatttagttccaaatacaaataatgtgcatgttttaagtttgggcgataatgtttggagaaatattcaaaattctcccgtggatcatggt |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||||| ||| ||| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20361617 |
taaggtggcgtatttagttccaaatacaaataatgtacgtgttttcagtaagggagataatatttggagaaatattcaaaattctcccgtggatcatggt |
20361518 |
T |
 |
| Q |
317 |
tattcgatgaatgttgtgaacctacatgagagtattaattggctggaaattcgcgattacaactctcattatgaccg-caacaatattactatcaagcaa |
415 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| |||| ||||| ||| ||||| | ||||| |||||| | ||||||||||||||| | ||| |
|
|
| T |
20361517 |
tattcgatgaatgttgtgaacctaagtgagagtattagttggttggaatttcacgatttccgctctcgttatgatggccaacaatattactattcatcaa |
20361418 |
T |
 |
| Q |
416 |
tttgtgatcatttctcttgatttggacactgaaacgcattctc |
458 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||| ||||| |
|
|
| T |
20361417 |
tttgtgatcatttctcttgatttgggcaccgaaacgctttctc |
20361375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 17 - 458
Target Start/End: Complemental strand, 20375117 - 20374676
Alignment:
| Q |
17 |
ctcgacatagttggctcttgcaatggattgctctgcttgtttggcaatactttcacttccaatttcgacattgagacgtggattcgcttttggaacccag |
116 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||| || ||||||| | ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
20375117 |
ctcgacatagttggctcttgcaatggattactctgcttgtttggccattctttcaccgctaatttcgacattgagacgtggatacgcttttggaacccag |
20375018 |
T |
 |
| Q |
117 |
ccacaaggacaatatctgaaaaactaggatatactattcataacaacctacatttccatcataatttgacgttcggttacgttaattcaaccgacactta |
216 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| |
|
|
| T |
20375017 |
ccacgaggacaatatctgaaaaattaggatatactattcataacaacctacatttccatcataatttgacgttttgttatgttaactcaaccgacactta |
20374918 |
T |
 |
| Q |
217 |
taaggtggcgtatttagttccaaatacaaataatgtgcatgttttaagtttgggcgataatgtttggagaaatattcaaaattctcccgtggatcatggt |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| ||| | ||||||||||||||| ||||||||||||| || ||| ||||||||||| |
|
|
| T |
20374917 |
taaggtggcgtatttagttccaaatacaaataatgtatgtgtttttagtattggcgataatgtttggcgaaatattcaaaactcccccttggatcatggt |
20374818 |
T |
 |
| Q |
317 |
tattcgatgaatgttgtgaacctacatgagagtattaattggctggaaattcgcgattacaactctcattatgaccgcaacaatattactatcaagcaat |
416 |
Q |
| |
|
|||||| | ||||||| ||| | | |||||||||||||||||| ||| | |||||| ||| |||||||| |||||||||||||||| |||||| |
|
|
| T |
20374817 |
tattcgttaaatgttgcaaacttgggtaagagtattaattggctggcaatccatgattaccgctcccattatgattgcaacaatattactattcagcaat |
20374718 |
T |
 |
| Q |
417 |
ttgtgatcatttctcttgatttggacactgaaacgcattctc |
458 |
Q |
| |
|
|| | || |||||||||||||||| |||||||| ||||||| |
|
|
| T |
20374717 |
ttatcattatttctcttgatttgggtactgaaacacattctc |
20374676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 17 - 235
Target Start/End: Original strand, 20360618 - 20360834
Alignment:
| Q |
17 |
ctcgacatagttggctcttgcaatggattgctctgcttgtttggcaatactttcacttccaatttcgacattgagacgtggattcgcttttggaacccag |
116 |
Q |
| |
|
|||||| ||||||| ||||||||| |||| ||||||||||||||| || |||||||| |||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
20360618 |
ctcgacctagttggatcttgcaattgatttctctgcttgtttggccattctttcactgccaatttcgacattgagacgcggattcacttttggaacccag |
20360717 |
T |
 |
| Q |
117 |
ccacaaggacaatatctgaaaaactaggatatactattcataacaacctacatttccatcataatttgacgttcggttacgttaattcaaccgacactta |
216 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||| |
|
|
| T |
20360718 |
ccacggggacaatatctgaaaaactagg--atactattcataacaacctacatatccatcataatttgacgtttggttttgttaattcaaccaacactta |
20360815 |
T |
 |
| Q |
217 |
taaggtggcgtatttagtt |
235 |
Q |
| |
|
|||||||| |||||||||| |
|
|
| T |
20360816 |
taaggtggtgtatttagtt |
20360834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 267 - 457
Target Start/End: Original strand, 20360836 - 20361026
Alignment:
| Q |
267 |
tgggcgataatgtttggagaaatattcaaaattctcccgtggatcatggttattcgatgaatgttgtgaacctacatgagagtattaattggctggaaat |
366 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| |||||| | |||| |
|
|
| T |
20360836 |
tgggcgataatgtttggagaaatgttcaaaattctcccttggatcatggttattcgataaatgttgtgaacctgagtgagagtattcattggccgaaaat |
20360935 |
T |
 |
| Q |
367 |
tcgcgattacaactctcattatgaccgcaacaatattactatcaagcaatttgtgatcatttctcttgatttggacactgaaacgcattct |
457 |
Q |
| |
|
| |||||||| || |||||||||| ||||||| |||||| | | |||||||| || |||||||| ||||||| ||||||||| |||||| |
|
|
| T |
20360936 |
ttgcgattactacactcattatgattgcaacaaaattactcttcaacaatttgtcattatttctctcgatttgggcactgaaacacattct |
20361026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 99 - 336
Target Start/End: Complemental strand, 20133849 - 20133612
Alignment:
| Q |
99 |
ttcgcttttggaacccagccacaaggacaatatctgaaaaactaggatatactattcataacaacctacatttccatcataatttgacgttcggttacgt |
198 |
Q |
| |
|
||||||| |||||||||||||| |||| |||||| |||| |||| ||| || ||||||| ||||| ||| ||| |||||||| ||| || || || |
|
|
| T |
20133849 |
ttcgcttctggaacccagccacgaggaaaatatcaccaaaattagggtattctcttcataaagacctatggttctatcctaatttgaagtttggctatgt |
20133750 |
T |
 |
| Q |
199 |
taattcaaccgacacttataaggtggcgtatttagttccaaatacaaataatgtgcatgttttaagtttgggcgataatgtttggagaaatattcaaaat |
298 |
Q |
| |
|
|||||||||||||||||| ||||| | |||||||||||||||||||| ||||| |||||| ||||| ||||||||| ||||||||| ||||||| || |
|
|
| T |
20133749 |
taattcaaccgacacttacaaggtcgtgtatttagttccaaatacaacaaatgtaagtgttttcagttttggcgataatatttggagaactattcaagat |
20133650 |
T |
 |
| Q |
299 |
tctcccgtggatcatggttattcgatgaatgttgtgaa |
336 |
Q |
| |
|
||||||||| |||||| || || ||| ||||||||||| |
|
|
| T |
20133649 |
tctcccgtgaatcatgattgttggataaatgttgtgaa |
20133612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 170 - 458
Target Start/End: Complemental strand, 20141279 - 20140991
Alignment:
| Q |
170 |
ttccatcataatttgacgttcggttacgttaattcaaccgacacttataaggtggcgtatttagttccaaatacaaataatgtgcatgttttaagtttgg |
269 |
Q |
| |
|
||||||| ||||||||| || | ||| || |||||||| |||||||| |||||| ||||||||||||| | || ||||| |||| || ||||||| |
|
|
| T |
20141279 |
ttccatcctaatttgacatttgcttatgtcaattcaactgacacttacaaggtgttgtatttagttccaggtgaaacaaatgtatatgtcttcagtttgg |
20141180 |
T |
 |
| Q |
270 |
gcgataatgtttggagaaatattcaaaattctcccgtggatcatggttattcgatgaatgttgtgaacctacatgagagtattaattggctggaaattcg |
369 |
Q |
| |
|
|||||||| ||||||||| ||||||| ||||||| |||||||||| ||| | ||| ||| ||||||| || ||||| |||||| |||| ||| |||||| |
|
|
| T |
20141179 |
gcgataatatttggagaactattcaagattctcctgtggatcatgattactggatcaattttgtgaatctgcatgactgtattagttggttggcaattcg |
20141080 |
T |
 |
| Q |
370 |
cgattacaactctcattatgaccgcaacaatattactatcaagcaatttgtgatcatttctcttgatttggacactgaaacgcattctc |
458 |
Q |
| |
|
| |||| ||| |||||| ||||||||||||| | | ||||||||||| |||||||| |||||| ||| || || ||||||| |
|
|
| T |
20141079 |
caattattctgctcgttatgatttcaacaatattactcttgaccaatttgtgattgtttctctttatttgggcaccgagacacattctc |
20140991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 99 - 334
Target Start/End: Original strand, 20338462 - 20338697
Alignment:
| Q |
99 |
ttcgcttttggaacccagccacaaggacaatatctgaaaaactaggatatactattcataacaacctacatttccatcataatttgacgttcggttacgt |
198 |
Q |
| |
|
|||| ||||||||||| |||||||||| |||||||| |||| |||| | ||||||| ||| |||| ||||| ||| |||||| ||| | || || | |
|
|
| T |
20338462 |
ttcgtttttggaaccctgccacaaggaaaatatctgcaaaattagggttctctattcacaacggcctatatttctatcctaatttaacgcttggctatga |
20338561 |
T |
 |
| Q |
199 |
taattcaaccgacacttataaggtggcgtatttagttccaaatacaaataatgtgcatgttttaagtttgggcgataatgtttggagaaatattcaaaat |
298 |
Q |
| |
|
||| ||| || ||||||||||||||| |||||| ||||| ||||||| ||||| |||||| | |||| ||||| ||||||||||||||||||| |
|
|
| T |
20338562 |
taaatcagccaacacttataaggtggtgtattttgttccgaatacaataaatgtcagtgttttcaatttgcagcataatagttggagaaatattcaaaat |
20338661 |
T |
 |
| Q |
299 |
tctcccgtggatcatggttattcgatgaatgttgtg |
334 |
Q |
| |
|
||||| ||| ||||| ||| || ||||||| |||| |
|
|
| T |
20338662 |
tctcctgtgactcatgattactccatgaatgctgtg |
20338697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 661225 - 661175
Alignment:
| Q |
94 |
gtggattcgcttttggaacccagccacaaggacaatatctgaaaaactagg |
144 |
Q |
| |
|
|||| |||| ||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
661225 |
gtggcttcgtttttggaacccggccacaaggacaatatctaaaaaactagg |
661175 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 20126743 - 20126625
Alignment:
| Q |
26 |
gttggctcttgcaatggattgctctgcttgtttggcaatactttcacttccaatttcgacattgagacgtggattcgcttttggaacccagccacaagga |
125 |
Q |
| |
|
||||| || ||||||||||| |||||||||||||| | |||||| |||||||| | | || |||||| |||| |||||||| ||||||||| || |
|
|
| T |
20126743 |
gttggttcctgcaatggattactctgcttgtttggttaggttttcacctccaattttaatagtgttacgtggcttcgtttttggaatccagccacatggg |
20126644 |
T |
 |
| Q |
126 |
caatatctgaaaaactagg |
144 |
Q |
| |
|
|||||||||||||| |||| |
|
|
| T |
20126643 |
caatatctgaaaaattagg |
20126625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 661050 - 661013
Alignment:
| Q |
269 |
ggcgataatgtttggagaaatattcaaaattctcccgt |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
661050 |
ggcgataatgtttggagaaatattcaaaattcccccgt |
661013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 22080394 - 22080434
Alignment:
| Q |
99 |
ttcgcttttggaacccagccacaaggacaatatctgaaaaa |
139 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22080394 |
ttcgtttttggaacccagccacaaggacaatatcagaaaaa |
22080434 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 292
Target Start/End: Original strand, 22021061 - 22021090
Alignment:
| Q |
263 |
agtttgggcgataatgtttggagaaatatt |
292 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
22021061 |
agtttgggcgataatgtttggagaaatatt |
22021090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 22028327 - 22028364
Alignment:
| Q |
257 |
gttttaagtttgggcgataatgtttggagaaatattca |
294 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
22028327 |
gtttttagtttgggcgataatgtttggaggaatattca |
22028364 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 292
Target Start/End: Original strand, 22036779 - 22036808
Alignment:
| Q |
263 |
agtttgggcgataatgtttggagaaatatt |
292 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
22036779 |
agtttgggcgataatgtttggagaaatatt |
22036808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 22520815 - 22520770
Alignment:
| Q |
104 |
ttttggaacccagccacaaggacaatatctgaaaaactaggatata |
149 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||| |||| |||| |
|
|
| T |
22520815 |
ttttggaacccatccacaaggacaagatctgaaaaattagggtata |
22520770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 16846847 - 16846795
Alignment:
| Q |
257 |
gttttaagtttgggcgataatgtttggagaaatattcaaaattctcccgtgga |
309 |
Q |
| |
|
||||| ||| |||||||||||| ||||||||||||||||| || ||| ||||| |
|
|
| T |
16846847 |
gtttttagtctgggcgataatgcttggagaaatattcaaagttttccggtgga |
16846795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 22063180 - 22063220
Alignment:
| Q |
99 |
ttcgcttttggaacccagccacaaggacaatatctgaaaaa |
139 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||| |||||| |
|
|
| T |
22063180 |
ttcgtttttggaacccagccacaaggataatatcagaaaaa |
22063220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 22069649 - 22069689
Alignment:
| Q |
99 |
ttcgcttttggaacccagccacaaggacaatatctgaaaaa |
139 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||| |||||| |
|
|
| T |
22069649 |
ttcgtttttggaacccagccacaaggataatatcagaaaaa |
22069689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0097 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0097
Description:
Target: scaffold0097; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 16750 - 16720
Alignment:
| Q |
265 |
tttgggcgataatgtttggagaaatattcaa |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
16750 |
tttgggcgataatgtttggagaaatattcaa |
16720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 20712911 - 20712881
Alignment:
| Q |
265 |
tttgggcgataatgtttggagaaatattcaa |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
20712911 |
tttgggcgataatgtttggagaaatattcaa |
20712881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 447
Target Start/End: Complemental strand, 11971214 - 11971166
Alignment:
| Q |
399 |
atattactatcaagcaatttgtgatcatttctcttgatttggacactga |
447 |
Q |
| |
|
||||||| ||||||||||||||||| ||||| |||||||| | |||||| |
|
|
| T |
11971214 |
atattacaatcaagcaatttgtgattatttcacttgattttggcactga |
11971166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University