View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10459_high_7 (Length: 212)

Name: NF10459_high_7
Description: NF10459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10459_high_7
NF10459_high_7
[»] chr2 (39 HSPs)
chr2 (76-212)||(28489266-28489402)
chr2 (1-74)||(36449779-36449852)
chr2 (1-79)||(38840520-38840598)
chr2 (1-74)||(23869562-23869634)
chr2 (1-74)||(7899909-7899982)
chr2 (1-74)||(18904368-18904441)
chr2 (1-78)||(18300751-18300826)
chr2 (1-74)||(18299374-18299447)
chr2 (1-74)||(18868925-18868998)
chr2 (1-79)||(18797242-18797321)
chr2 (1-72)||(36450948-36451018)
chr2 (1-74)||(1034496-1034569)
chr2 (9-74)||(11938823-11938888)
chr2 (1-74)||(16446155-16446228)
chr2 (1-74)||(18906014-18906087)
chr2 (1-74)||(22848192-22848265)
chr2 (1-74)||(41879239-41879312)
chr2 (1-51)||(11258838-11258888)
chr2 (1-74)||(38839243-38839316)
chr2 (1-72)||(7898694-7898765)
chr2 (1-74)||(24476871-24476942)
chr2 (1-74)||(41878093-41878168)
chr2 (1-74)||(802618-802690)
chr2 (1-74)||(13570584-13570657)
chr2 (1-74)||(22587981-22588053)
chr2 (1-76)||(13030291-13030363)
chr2 (1-72)||(13567975-13568046)
chr2 (1-51)||(32739647-32739697)
chr2 (1-74)||(11257623-11257695)
chr2 (22-74)||(1033212-1033263)
chr2 (1-43)||(810808-810850)
chr2 (1-43)||(11996739-11996781)
chr2 (17-74)||(21837298-21837353)
chr2 (1-51)||(24475248-24475298)
chr2 (1-51)||(28617946-28617996)
chr2 (4-77)||(26544147-26544219)
chr2 (1-72)||(8535683-8535752)
chr2 (9-77)||(26545556-26545624)
chr2 (22-74)||(28365513-28365565)
[»] chr5 (37 HSPs)
chr5 (1-74)||(16650882-16650955)
chr5 (1-74)||(28538677-28538750)
chr5 (1-74)||(22940649-22940722)
chr5 (1-74)||(25523070-25523143)
chr5 (1-70)||(36486515-36486584)
chr5 (1-74)||(19752913-19752985)
chr5 (1-74)||(25056408-25056481)
chr5 (1-74)||(40255699-40255772)
chr5 (1-72)||(28539847-28539917)
chr5 (1-74)||(1796055-1796128)
chr5 (1-83)||(18154486-18154567)
chr5 (1-79)||(33160313-33160391)
chr5 (1-74)||(18486929-18487002)
chr5 (1-74)||(33158099-33158172)
chr5 (1-73)||(36485302-36485374)
chr5 (1-72)||(24332916-24332987)
chr5 (1-79)||(25524154-25524233)
chr5 (1-74)||(5777902-5777973)
chr5 (1-74)||(5778863-5778936)
chr5 (1-74)||(20214197-20214269)
chr5 (1-83)||(19754157-19754240)
chr5 (1-72)||(20216790-20216861)
chr5 (1-74)||(5730442-5730516)
chr5 (1-74)||(18485139-18485212)
chr5 (1-72)||(42195137-42195206)
chr5 (1-67)||(1015492-1015558)
chr5 (1-51)||(2686428-2686478)
chr5 (1-51)||(34893689-34893739)
chr5 (1-74)||(25055413-25055486)
chr5 (19-74)||(31576607-31576662)
chr5 (19-74)||(38476725-38476780)
chr5 (1-72)||(38834090-38834160)
chr5 (1-51)||(7311614-7311664)
chr5 (4-74)||(42196230-42196300)
chr5 (1-74)||(21835042-21835114)
chr5 (22-74)||(20653821-20653873)
chr5 (22-74)||(23040287-23040339)
[»] chr6 (29 HSPs)
chr6 (1-74)||(16704524-16704597)
chr6 (1-79)||(10784588-10784667)
chr6 (1-72)||(1829630-1829701)
chr6 (1-74)||(8822820-8822893)
chr6 (8-74)||(3721613-3721679)
chr6 (1-74)||(3722534-3722607)
chr6 (18-79)||(7316338-7316399)
chr6 (1-74)||(8659266-8659339)
chr6 (1-74)||(8821874-8821947)
chr6 (1-51)||(10785940-10785990)
chr6 (1-75)||(12382738-12382812)
chr6 (4-74)||(26574620-26574690)
chr6 (1-74)||(8660231-8660303)
chr6 (1-51)||(26575081-26575131)
chr6 (1-79)||(27437824-27437902)
chr6 (1-74)||(6842310-6842383)
chr6 (1-74)||(14822361-14822434)
chr6 (1-74)||(27322095-27322167)
chr6 (17-73)||(26717127-26717183)
chr6 (1-79)||(14823602-14823681)
chr6 (1-72)||(34834606-34834677)
chr6 (1-74)||(7314881-7314953)
chr6 (22-74)||(16415581-16415633)
chr6 (27-79)||(27447966-27448018)
chr6 (27-70)||(29473082-29473125)
chr6 (1-74)||(16703571-16703641)
chr6 (1-51)||(17496821-17496871)
chr6 (1-79)||(27318311-27318388)
chr6 (1-74)||(3333053-3333126)
[»] scaffold0302 (2 HSPs)
scaffold0302 (1-74)||(17471-17544)
scaffold0302 (1-74)||(18803-18876)
[»] chr3 (48 HSPs)
chr3 (1-74)||(7758403-7758476)
chr3 (1-74)||(51038817-51038890)
chr3 (1-74)||(54539756-54539829)
chr3 (1-74)||(54540817-54540890)
chr3 (1-74)||(29931227-29931300)
chr3 (1-74)||(29980381-29980454)
chr3 (1-72)||(7267647-7267717)
chr3 (1-80)||(19984844-19984923)
chr3 (1-74)||(22776839-22776912)
chr3 (1-74)||(47609698-47609771)
chr3 (1-74)||(49216248-49216321)
chr3 (1-74)||(12700176-12700247)
chr3 (1-74)||(29932726-29932798)
chr3 (1-74)||(29981880-29981952)
chr3 (1-74)||(46719942-46720015)
chr3 (1-74)||(46721247-46721320)
chr3 (17-74)||(47615591-47615648)
chr3 (1-62)||(55192022-55192083)
chr3 (1-72)||(47610607-47610678)
chr3 (1-79)||(5001196-5001274)
chr3 (1-71)||(24516464-24516534)
chr3 (1-55)||(34019172-34019226)
chr3 (1-74)||(534500-534573)
chr3 (1-66)||(6170281-6170346)
chr3 (1-74)||(51037537-51037609)
chr3 (1-74)||(51469973-51470046)
chr3 (1-77)||(53616043-53616119)
chr3 (1-72)||(7268854-7268924)
chr3 (1-76)||(8456477-8456551)
chr3 (1-74)||(535809-535882)
chr3 (1-66)||(6249618-6249683)
chr3 (1-74)||(12703527-12703599)
chr3 (1-70)||(23769862-23769931)
chr3 (1-74)||(47614186-47614259)
chr3 (1-74)||(51470482-51470554)
chr3 (2-74)||(53901416-53901486)
chr3 (1-74)||(19986097-19986172)
chr3 (1-74)||(5029710-5029782)
chr3 (1-74)||(52840631-52840704)
chr3 (1-48)||(31645000-31645047)
chr3 (4-74)||(11671371-11671440)
chr3 (25-55)||(31214506-31214536)
chr3 (28-74)||(53614820-53614866)
chr3 (1-74)||(8875907-8875980)
chr3 (21-74)||(28263158-28263211)
chr3 (1-74)||(52839038-52839111)
chr3 (1-42)||(55191544-55191585)
chr3 (32-72)||(40426837-40426877)
[»] chr1 (43 HSPs)
chr1 (1-74)||(24422801-24422874)
chr1 (1-74)||(52274969-52275042)
chr1 (1-74)||(14999286-14999358)
chr1 (1-74)||(36613931-36614004)
chr1 (1-74)||(51684367-51684440)
chr1 (1-74)||(52827348-52827421)
chr1 (1-74)||(11437226-11437299)
chr1 (1-74)||(35594218-35594290)
chr1 (1-74)||(39698564-39698637)
chr1 (1-74)||(39699794-39699866)
chr1 (1-72)||(24426102-24426173)
chr1 (1-72)||(43058789-43058859)
chr1 (1-74)||(23980493-23980566)
chr1 (2-74)||(39222501-39222574)
chr1 (1-74)||(45148582-45148654)
chr1 (2-74)||(14999983-15000055)
chr1 (1-72)||(39153143-39153214)
chr1 (1-72)||(45149998-45150068)
chr1 (1-79)||(7674524-7674600)
chr1 (1-79)||(35067029-35067107)
chr1 (1-74)||(11436043-11436116)
chr1 (1-74)||(33088644-33088717)
chr1 (1-74)||(45157236-45157308)
chr1 (1-72)||(39151934-39152005)
chr1 (1-72)||(43378740-43378810)
chr1 (1-72)||(45156052-45156123)
chr1 (1-72)||(50680335-50680405)
chr1 (1-74)||(41364830-41364902)
chr1 (1-74)||(43060033-43060106)
chr1 (1-74)||(51685792-51685865)
chr1 (2-74)||(50681632-50681704)
chr1 (1-72)||(37526904-37526975)
chr1 (1-72)||(52828097-52828168)
chr1 (1-83)||(11190377-11190459)
chr1 (9-74)||(7675494-7675558)
chr1 (9-74)||(12390016-12390081)
chr1 (6-74)||(35595224-35595293)
chr1 (1-74)||(36612854-36612926)
chr1 (1-74)||(44404443-44404516)
chr1 (26-77)||(2260629-2260680)
chr1 (6-72)||(52276195-52276261)
chr1 (1-74)||(41366157-41366230)
chr1 (3-47)||(48441093-48441137)
[»] chr8 (34 HSPs)
chr8 (1-72)||(29968364-29968434)
chr8 (1-74)||(1823553-1823626)
chr8 (1-74)||(1857998-1858071)
chr8 (1-74)||(22221391-22221464)
chr8 (1-74)||(22227733-22227806)
chr8 (1-74)||(12351922-12351995)
chr8 (1-74)||(30335640-30335713)
chr8 (1-74)||(10007790-10007863)
chr8 (10-74)||(12353396-12353459)
chr8 (1-72)||(11287779-11287850)
chr8 (1-79)||(18979147-18979225)
chr8 (1-74)||(5513983-5514055)
chr8 (1-74)||(22220389-22220462)
chr8 (1-74)||(24122884-24122956)
chr8 (1-74)||(32207352-32207423)
chr8 (1-70)||(1824105-1824174)
chr8 (1-70)||(1858550-1858619)
chr8 (1-74)||(10006345-10006418)
chr8 (1-70)||(43661850-43661919)
chr8 (1-73)||(29043400-29043472)
chr8 (9-72)||(11282011-11282074)
chr8 (1-66)||(18970920-18970984)
chr8 (1-66)||(18978029-18978093)
chr8 (1-74)||(42982684-42982757)
chr8 (1-72)||(8389716-8389787)
chr8 (28-79)||(11288914-11288965)
chr8 (1-74)||(8388465-8388536)
chr8 (9-74)||(23170034-23170097)
chr8 (1-74)||(30336528-30336601)
chr8 (1-70)||(45114543-45114612)
chr8 (18-74)||(24483144-24483200)
chr8 (1-73)||(43661267-43661339)
chr8 (27-74)||(36249553-36249600)
chr8 (1-72)||(40471174-40471244)
[»] chr4 (44 HSPs)
chr4 (1-70)||(31599794-31599863)
chr4 (1-74)||(31601012-31601085)
chr4 (1-74)||(48780249-48780322)
chr4 (1-73)||(19750602-19750673)
chr4 (1-73)||(19789133-19789204)
chr4 (1-79)||(49308054-49308131)
chr4 (1-74)||(1290225-1290298)
chr4 (1-74)||(1835129-1835202)
chr4 (1-74)||(1964468-1964541)
chr4 (1-74)||(10471415-10471488)
chr4 (1-72)||(8758864-8758935)
chr4 (1-72)||(12129626-12129697)
chr4 (1-83)||(26421649-26421730)
chr4 (1-74)||(1963197-1963270)
chr4 (9-74)||(10470547-10470612)
chr4 (1-74)||(25684935-25685008)
chr4 (1-72)||(35935560-35935631)
chr4 (1-74)||(1834120-1834193)
chr4 (1-74)||(25685849-25685922)
chr4 (1-74)||(52491634-52491707)
chr4 (1-65)||(21539098-21539162)
chr4 (1-74)||(13386559-13386633)
chr4 (1-74)||(5525361-5525433)
chr4 (1-74)||(8757676-8757748)
chr4 (1-74)||(17382994-17383066)
chr4 (1-74)||(17388238-17388310)
chr4 (1-83)||(13386006-13386089)
chr4 (1-74)||(5526153-5526225)
chr4 (1-74)||(13509386-13509458)
chr4 (1-72)||(1289100-1289171)
chr4 (5-72)||(55603562-55603628)
chr4 (1-74)||(10447007-10447081)
chr4 (1-55)||(27257987-27258041)
chr4 (1-51)||(37728592-37728642)
chr4 (1-74)||(50909700-50909773)
chr4 (1-72)||(8155741-8155811)
chr4 (1-74)||(3927667-3927740)
chr4 (1-74)||(3928885-3928958)
chr4 (1-74)||(10448287-10448360)
chr4 (1-74)||(14868891-14868963)
chr4 (1-74)||(14876971-14877043)
chr4 (1-74)||(21177998-21178070)
chr4 (1-74)||(48781073-48781145)
chr4 (1-50)||(49306799-49306848)
[»] scaffold0294 (2 HSPs)
scaffold0294 (1-74)||(5465-5538)
scaffold0294 (1-74)||(4443-4516)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-74)||(49111-49184)
[»] scaffold0019 (2 HSPs)
scaffold0019 (1-74)||(60091-60164)
scaffold0019 (1-76)||(61486-61561)
[»] chr7 (30 HSPs)
chr7 (1-73)||(17781663-17781735)
chr7 (1-83)||(3227621-3227703)
chr7 (1-74)||(31659623-31659697)
chr7 (1-74)||(18371425-18371498)
chr7 (1-74)||(22630479-22630552)
chr7 (1-74)||(48934930-48935003)
chr7 (3-74)||(20163585-20163656)
chr7 (1-74)||(11658380-11658453)
chr7 (1-74)||(17782580-17782653)
chr7 (1-72)||(128628-128699)
chr7 (1-80)||(31949829-31949908)
chr7 (1-72)||(42886313-42886384)
chr7 (1-83)||(7501879-7501961)
chr7 (1-70)||(14999182-14999249)
chr7 (1-74)||(127338-127410)
chr7 (1-74)||(7500456-7500528)
chr7 (1-74)||(31949323-31949396)
chr7 (1-68)||(47524532-47524599)
chr7 (1-43)||(18372484-18372526)
chr7 (9-74)||(769414-769479)
chr7 (1-74)||(3227109-3227181)
chr7 (1-81)||(22629477-22629560)
chr7 (1-74)||(34174010-34174082)
chr7 (1-74)||(47525394-47525467)
chr7 (1-72)||(11662578-11662649)
chr7 (17-72)||(46483551-46483605)
chr7 (17-74)||(32253441-32253498)
chr7 (1-79)||(21505412-21505488)
chr7 (1-74)||(31661036-31661109)
chr7 (1-74)||(47369782-47369855)
[»] scaffold1303 (1 HSPs)
scaffold1303 (1-82)||(1432-1513)
[»] scaffold0320 (1 HSPs)
scaffold0320 (1-74)||(19489-19562)
[»] scaffold0059 (1 HSPs)
scaffold0059 (1-77)||(4757-4832)
[»] scaffold2034 (2 HSPs)
scaffold2034 (1-74)||(234-307)
scaffold2034 (1-54)||(1005-1058)
[»] scaffold0632 (1 HSPs)
scaffold0632 (1-74)||(3335-3407)
[»] scaffold0093 (2 HSPs)
scaffold0093 (8-75)||(2499-2565)
scaffold0093 (8-75)||(7122-7188)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-73)||(18730-18802)
[»] scaffold0112 (1 HSPs)
scaffold0112 (1-74)||(37149-37221)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-79)||(49460-49538)
scaffold0003 (27-79)||(39340-39392)
[»] scaffold0186 (1 HSPs)
scaffold0186 (2-74)||(23082-23152)
[»] scaffold0586 (1 HSPs)
scaffold0586 (1-72)||(6346-6417)
[»] scaffold0002 (1 HSPs)
scaffold0002 (18-55)||(15702-15739)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-74)||(13194-13265)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-74)||(7442-7515)


Alignment Details
Target: chr2 (Bit Score: 129; Significance: 6e-67; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 76 - 212
Target Start/End: Complemental strand, 28489402 - 28489266
Alignment:
Q  76 tattaaaattgattagttgaagtgggtttgattactcaacttctttgagtaaaagaataaataattgaaggttttgagctcaaacctagacaaagaacta 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  28489402 tattaaaattgattagttgaagtgggtttgattactcaacttctttgagtaaaagaataaataattgaaggttttgagctcaaacctagacaaagaatta 28489303  T
Q  176 aatattaatctaacaactaatggtcatgctaagttgc 212  Q
    ||||||||||||||||||| |||||||||||||||||    
T  28489302 aatattaatctaacaactagtggtcatgctaagttgc 28489266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36449852 - 36449779
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  36449852 aattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 36449779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38840520 - 38840598
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatt 79  Q
    |||||||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||||||||||||||| ||||    
T  38840520 aattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctatt 38840598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23869562 - 23869634
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23869562 aattgtagtttttgtatttagggggccaaaattgcaagttttt-aaagttaagggtggaaaagtgcactttagc 23869634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7899909 - 7899982
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||| ||||||||||||  ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  7899909 aattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 7899982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18904441 - 18904368
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||||| |||| |||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  18904441 aattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcactttagc 18904368  T

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Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18300751 - 18300826
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttat 78  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||  || ||||||||||| ||||||||||    
T  18300751 aattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagtta--gggggaaaagtgcaatttagcttat 18300826  T

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Target: chr2; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18299447 - 18299374
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||| |||||||| || |||||||| |||||||| ||||||| ||||||||||||||||||||||    
T  18299447 aattgtagtttttatacttaggtggccaaaattgaaagtttttgaaagttacgggtggaaaagtgcactttagc 18299374  T

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Target: chr2; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18868998 - 18868925
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||| ||||| || ||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  18868998 aattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagc 18868925  T

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Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18797321 - 18797242
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta-agggtggaaaagtgcactttagcttatt 79  Q
    ||||||||||||  |||||| |||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||||    
T  18797321 aattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgcactttagcctatt 18797242  T

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Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 36450948 - 36451018
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||| ||||||||||||  ||||||||||||||||| ||||||||||| ||||||||||||||||    
T  36450948 aattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcacttta 36451018  T

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Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1034496 - 1034569
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||| ||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  1034496 aattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagc 1034569  T

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Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 11938823 - 11938888
Alignment:
Q  9 tttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||| |  ||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  11938823 tttttgtacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagc 11938888  T

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Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16446228 - 16446155
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||| ||| | ||| |||||||||||||||| |||||||||||| ||||| |||||||||||    
T  16446228 aattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcactttagc 16446155  T

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Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18906014 - 18906087
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||||||||||  |||||||||||||||| |||||||   | ||||||||||||||||||    
T  18906014 aattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagc 18906087  T

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Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22848265 - 22848192
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||| |||||||  ||||||||||||||||| ||||||| ||| | ||||||||||||||||    
T  22848265 aattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagc 22848192  T

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Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 41879239 - 41879312
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| ||| ||||||| | ||||||| ||||||||    
T  41879239 aattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtactttagc 41879312  T

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Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11258838 - 11258888
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 51  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  11258838 aattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta 11258888  T

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Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38839316 - 38839243
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||| ||||||||  |||||||||||||||| ||| ||||||| | |||| |||||||||||    
T  38839316 aattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcactttagc 38839243  T

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Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 7898765 - 7898694
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||| | |||||||| ||  |||||||||||||||| |||||||||||  |||||||||||||||    
T  7898765 aattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcacttta 7898694  T

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Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24476871 - 24476942
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||||  ||| | ||||||||||| ||||    
T  24476871 aattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt--gggggaaaaagtgcactctagc 24476942  T

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Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41878168 - 41878093
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgca---agtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||| ||||||||||||| ||||||||||   ||||||| ||||||||||| || |||||||||||||||    
T  41878168 aattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaaggg-gggaaagtgcactttagc 41878093  T

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Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 802618 - 802690
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||  |||||| ||||||||||||||||| ||| || |||| |||||||| |||||||||    
T  802618 aattgtagtttttgtacacagggggccaaaattgcaagtttttgaaactt-aggggggaaaagtacactttagc 802690  T

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Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13570584 - 13570657
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||| ||||||||||||||| |||   |||||||||||||||| ||||||| |||| ||||| |||||||||||    
T  13570584 aattatagtttttgtacttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatgcactttagc 13570657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22587981 - 22588053
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||| ||||||  ||||||||||||||||| ||||||| | | |||||| |||||||||||    
T  22587981 aattgtagtttttgtacataggggc-caaaattgcaagtttttgaaagttatgaggggaaaaatgcactttagc 22588053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13030363 - 13030291
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagctt 76  Q
    ||||||| ||||||||||||||||  ||||||| ||||||||| ||||||| |||  |||||||||||||||||||    
T  13030363 aattgtaatttttgtacttaggggc-caaaattacaagtttttgaaagttagggg--gaaaagtgcactttagctt 13030291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 13568046 - 13567975
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||| |||   | |||||||| |||||||    
T  13568046 aattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacacttta 13567975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32739697 - 32739647
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 51  Q
    ||||||||||||||||| || |||| ||||||||||||||||| |||||||    
T  32739697 aattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagtta 32739647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11257695 - 11257623
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||| |||||||||  | |||||||||||||||| |||||||  || | ||||||||||||||||    
T  11257695 aattgtagtttttatacttagggttt-aaaattgcaagtttttgaaagttagaggagtaaaagtgcactttagc 11257623  T

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Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 1033263 - 1033212
Alignment:
Q  22 ggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||| |||||||||||||||||||||||| |||| |||||||| |||||||||    
T  1033263 ggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtacactttagc 1033212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 810808 - 810850
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagttttt 43  Q
    |||||||||||||||||  |||||| |||||||||||||||||    
T  810808 aattgtagtttttgtacacagggggccaaaattgcaagttttt 810850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11996781 - 11996739
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagttttt 43  Q
    ||||||||||||||||| |||||||||||||| |||| |||||    
T  11996781 aattgtagtttttgtacatagggggtcaaaatcgcaacttttt 11996739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 21837298 - 21837353
Alignment:
Q  17 cttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||| ||||||||||||||||| |||||||  || | ||||||||||||||||    
T  21837298 cttagggggccaaaattgcaagtttttgaaagtta--ggggaaaaagtgcactttagc 21837353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24475298 - 24475248
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 51  Q
    ||||||||||||| |||||||||||  |||||| ||||||||| |||||||    
T  24475298 aattgtagtttttatacttagggggcaaaaattacaagtttttgaaagtta 24475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28617996 - 28617946
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 51  Q
    ||||| ||||||||||||| ||||| |||||||||||| |||| |||||||    
T  28617996 aattgaagtttttgtacttggggggccaaaattgcaagattttgaaagtta 28617946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 26544219 - 26544147
Alignment:
Q  4 tgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagctta 77  Q
    |||||||||||||||||||    |||||||| || ||||||||| ||| |||| ||||||||||||||| ||||    
T  26544219 tgtagtttttgtacttaggaac-caaaattgtaaatttttaaaaattaggggtagaaaagtgcactttatctta 26544147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 8535683 - 8535752
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||| | ||||||  || |||||||| |||||||||||||||||  || ||||||||| ||||||    
T  8535683 aattgtagtttctctacttaaaggatcaaaattacaagtttttaaaagtta--ggaggaaaagtgtacttta 8535752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 26545556 - 26545624
Alignment:
Q  9 tttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagctta 77  Q
    |||||||| ||| |||||||||||||||| ||||| ||||| | |   | |||||||||||||||||||    
T  26545556 tttttgtatttaaggggtcaaaattgcaaatttttgaaagtcatgaaggaaaaagtgcactttagctta 26545624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 28365565 - 28365513
Alignment:
Q  22 ggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||| |||| ||||||||| |||||||  |||||||||| ||||||    
T  28365565 ggggtcaaaatcgcaactttttaaaatttaaggggtgaaaagtgcattttagc 28365513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16650882 - 16650955
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16650882 aattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 16650955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28538750 - 28538677
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  28538750 aattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcactttagc 28538677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22940649 - 22940722
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22940649 aattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 22940722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25523143 - 25523070
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||||||||||  |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  25523143 aattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 25523070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36486515 - 36486584
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||    
T  36486515 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcactt 36486584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19752985 - 19752913
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  19752985 aattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagc 19752913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25056408 - 25056481
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||  ||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||    
T  25056408 aattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagc 25056481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40255699 - 40255772
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  40255699 aattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcactttagc 40255772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 28539847 - 28539917
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| |||||||||    
T  28539847 aattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagtt-aggggggaaaaatgcacttta 28539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1796128 - 1796055
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||||||| || |||| |||||||||||| ||||||| |||||||||| |||||||||||    
T  1796128 aattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactttagc 1796055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18154567 - 18154486
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttattaaaa 83  Q
    |||||||||||||||||||||||| ||||||||| |||||||| |||||||||||   |||||| ||||||||| ||||||||    
T  18154567 aattgtagtttttgtacttagggg-tcaaaattgtaagtttttgaaagttaaggggaaaaaagttcactttagcctattaaaa 18154486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 33160313 - 33160391
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatt 79  Q
    ||||||||||| | |||||||||||  |||||||||||||||| ||| ||||||| |||||||||||||||||| ||||    
T  33160313 aattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagcctatt 33160391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18486929 - 18487002
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||| | ||||||||||| ||||||||||||||||| ||||||||||| || |||||||||||||||    
T  18486929 aattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcactttagc 18487002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33158172 - 33158099
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||   |||| |||||||||||    
T  33158172 aattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagc 33158099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36485374 - 36485302
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttag 73  Q
    |||| ||||||||||||||| | ||||||||||| |||||||| ||||||| |||||||||| ||||||||||    
T  36485374 aattatagtttttgtacttaagaggtcaaaattgtaagttttttaaagttaggggtggaaaaatgcactttag 36485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 24332987 - 24332916
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||||||||| || |||| ||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  24332987 aattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25524154 - 25524233
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta-agggtggaaaagtgcactttagcttatt 79  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||||| |||  ||| |||||||||||||||||| ||||    
T  25524154 aattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagcctatt 25524233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5777973 - 5777902
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||  || || |||||||||||||||    
T  5777973 aattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta--ggggggaaagtgcactttagc 5777902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5778863 - 5778936
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| ||||||||||||  |||||||||||||||| |||||||  || ||||||||||||||||||    
T  5778863 aattgtggttttggtacttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 5778936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20214269 - 20214197
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||| ||| | |  |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  20214269 aattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttagc 20214197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 19754157 - 19754240
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtg-gaaaagtgcactttagcttattaaaa 83  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||||| ||| |  |||| ||||||||||| ||| ||||    
T  19754157 aattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagttaggggggaaaaaaatgcactttagcctatcaaaa 19754240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 20216790 - 20216861
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||||||||  ||||| |  |||||||||||||||| ||| ||||||| ||||||||||||||||    
T  20216790 aattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttta 20216861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5730516 - 5730442
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaa-gggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||  | ||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  5730516 aattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagc 5730442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18485212 - 18485139
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||||  ||||||||||| ||||||||||||||||| |||||||  || | ||||||||||||||||    
T  18485212 aattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttagc 18485139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 42195206 - 42195137
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||||| |||||||| ||||||| |||||| |||| |||||||| |||||||| ||||||||||||||||    
T  42195206 aattgtagattttgtacatagggggccaaaatcgcaactttttaaa-gttaaggg-ggaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1015558 - 1015492
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgca 67  Q
    |||||||| ||||||||  |||||| |||||||| || ||||||||||||| ||| |||||||||||    
T  1015558 aattgtaggttttgtacacagggggccaaaattgtaactttttaaaagttaggggaggaaaagtgca 1015492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2686428 - 2686478
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 51  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||||||    
T  2686428 aattatagtttttgtacttaagagatcaaaattgcaagtttttaaaagtta 2686478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 34893739 - 34893689
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 51  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| |||||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagtta 34893689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25055486 - 25055413
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||| ||| |||||| |||||||||||||   || |||||||  || ||||||||||||||||||    
T  25055486 aattgtagtttttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcactttagc 25055413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 31576607 - 31576662
Alignment:
Q  19 tagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||| |||||| |||| ||||||||| |||||||  |||||||||||||||||    
T  31576607 tagggggacaaaatcgcaactttttaaaacttaaggggtgaaaagtgcactttagc 31576662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 38476725 - 38476780
Alignment:
Q  19 tagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||  ||| ||||||||| |||||||  |||||||||||||||||    
T  38476725 tagggggtcaaaatcacaactttttaaaacttaaggggtgaaaagtgcactttagc 38476780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 38834160 - 38834090
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||||||||| || ||| ||||||| |||| |||||||||||||||||   |||| |||||||||    
T  38834160 aattgtagtttttgtacataaggg-tcaaaatcgcaactttttaaaagttaaggggaaaaaaatgcacttta 38834090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7311664 - 7311614
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 51  Q
    ||||||||||||||||||| || || ||| ||||||||||||| |||||||    
T  7311664 aattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagtta 7311614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 42196230 - 42196300
Alignment:
Q  4 tgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||| ||| ||| |||| |  ||| ||||||||||||| ||| || |||||||||||||||    
T  42196230 tgtagtttttgtacatagagggccaaattcacaactttttaaaagttaggggggggaaagtgcactttagc 42196300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21835114 - 21835042
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||| ||||||||||||||  ||| ||||| ||| || || | || |||||||||||||||    
T  21835114 aattgtagtttttgtacatagggggtcaaaatcacaactttttcaaactt-agagggggaaagtgcactttagc 21835042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 20653873 - 20653821
Alignment:
Q  22 ggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||| |||| ||||||||| ||||| |  |||||||||||||||||    
T  20653873 ggggtcaaaatcgcaactttttaaaacttaagagatgaaaagtgcactttagc 20653821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 23040287 - 23040339
Alignment:
Q  22 ggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||| |||| ||||||||| |||||||  |||||||| ||||||||    
T  23040287 ggggtcaaaatcgcaactttttaaaacttaagggatgaaaagtgtactttagc 23040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 2e-29; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16704524 - 16704597
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16704524 aattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttagc 16704597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 10784667 - 10784588
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggg-tggaaaagtgcactttagcttatt 79  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  10784667 aattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcactttagcctatt 10784588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 1829630 - 1829701
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||    
T  1829630 aattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcacttta 1829701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8822820 - 8822893
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||| |  ||||||||||||||||||    
T  8822820 aattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcactttagc 8822893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 3721679 - 3721613
Alignment:
Q  8 gtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||| |||||||||||||||||||||||||||||| |||||||  || ||||||||||||||||||    
T  3721679 gttttggtacttagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 3721613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3722534 - 3722607
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| ||||||| ||  ||||||||||||||||||    
T  3722534 aattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagc 3722607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 7316338 - 7316399
Alignment:
Q  18 ttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatt 79  Q
    |||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| ||||    
T  7316338 ttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctatt 7316399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8659339 - 8659266
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| |||||||  || ||||||||||||||||||    
T  8659339 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 8659266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8821947 - 8821874
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| |||||||  || ||||||||||||||||||    
T  8821947 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 8821874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10785940 - 10785990
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 51  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  10785940 aattgtagtttttgtacttagggggttaaaattgcaaatttttaaaagtta 10785990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12382738 - 12382812
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagct 75  Q
    |||| |||||||  ||||||||||||||||||| ||| ||||||||| |||  ||||||||||||||||||||||    
T  12382738 aattatagttttaatacttagggggtcaaaattacaaatttttaaaaattagaggtggaaaagtgcactttagct 12382812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 26574690 - 26574620
Alignment:
Q  4 tgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||| || |||||||||||||||||| |||||||  ||||| ||| |||||||||||    
T  26574690 tgtagtttttgtacttagaggttcaaaattgcaagtttttgaaagttagaggtgggaaattgcactttagc 26574620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8660231 - 8660303
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| ||||||| | | ||||||||||||||||||    
T  8660231 aattgtggttttggtacttagggg-tcaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagc 8660303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26575081 - 26575131
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 51  Q
    |||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  26575081 aattgtagtttttgtacttaaggggttaaaattgcaagtttttgaaagtta 26575131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 27437902 - 27437824
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatt 79  Q
    ||||||||||||| |   ||||||| ||||||||||| ||||| |||||||||||  ||||||||||||||||| ||||    
T  27437902 aattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcctatt 27437824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6842310 - 6842383
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||| || ||||||| ||||||||||| ||||| ||| |||  || ||||||||||||||||||    
T  6842310 aattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagc 6842383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14822434 - 14822361
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||| | |||||| |||| ||||||||||||||||| ||| |||||||  |||||||||||| ||||    
T  14822434 aattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactctagc 14822361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27322095 - 27322167
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||| |||||||||||| |||| |||| | |||| ||||||||||||||||||    
T  27322095 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagc 27322167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 26717127 - 26717183
Alignment:
Q  17 cttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttag 73  Q
    |||| |||||||||||||||||||| | ||| ||||||| |||||||||||||||||    
T  26717127 cttaaggggtcaaaattgcaagtttctgaaacttaaggggggaaaagtgcactttag 26717183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 14823602 - 14823681
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtg-gaaaagtgcactttagcttatt 79  Q
    ||||||||||| |||||||| ||||  |||||||||||||||| ||| ||||||| |  |||||||||||||||| ||||    
T  14823602 aattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagcctatt 14823681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 34834606 - 34834677
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||| |||||  |||||||| | |||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  34834606 aattgtggttttgatacttaggagatcaaaattgcaagtttttgaaagttagggagggaaaagtgcacttta 34834677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7314953 - 7314881
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||||  ||||||||||  ||||||||||||||||| |||||||  || ||||||||||||||||||    
T  7314953 aattgttgttttgatacttaggggc-caaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 7314881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 16415581 - 16415633
Alignment:
Q  22 ggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||| |||| ||||||||| |||||||  |||||||||||||||||    
T  16415581 ggggtcaaaatcgcaactttttaaaatttaaggggtgaaaagtgcactttagc 16415633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 27447966 - 27448018
Alignment:
Q  27 caaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatt 79  Q
    |||||||| || ||||||||| ||||||| |||||||||||||||||| ||||    
T  27447966 caaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcctatt 27448018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 29473125 - 29473082
Alignment:
Q  27 caaaattgcaagtttttaaaagttaagggtggaaaagtgcactt 70  Q
    ||||||||||| ||||||||| ||||||| ||||||||||||||    
T  29473125 caaaattgcaactttttaaaacttaaggggggaaaagtgcactt 29473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16703641 - 16703571
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||| ||| ||  |||||||||||||||||| |||| ||  || ||||||||||||||||||    
T  16703641 aattgtagtttttgtatttatgga-tcaaaattgcaagtttttgaaagata--gggggaaaagtgcactttagc 16703571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17496871 - 17496821
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 51  Q
    ||||| ||||||||||||||| |||| ||||||| |||||||| |||||||    
T  17496871 aattgcagtttttgtacttagagggttaaaattgtaagtttttgaaagtta 17496821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 27318388 - 27318311
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatt 79  Q
    |||||| ||||| |||||||||||| |||||||||||| |||| |||| | |||| | ||| |||||||||||| ||||    
T  27318388 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-agggggaaaaggtgcactttagcctatt 27318311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3333053 - 3333126
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||| ||||||| |||||| |||| ||||| ||| |||   | ||||||||||| ||||||    
T  3333053 aattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttagaaggggaaaagtgcaatttagc 3333126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17544 - 17471
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||    
T  17544 aattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagc 17471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18803 - 18876
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||| |||||||||||| ||||||  ||||||||||| ||||||||||||| | | | ||||||||||||||||    
T  18803 aattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcactttagc 18876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7758476 - 7758403
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  7758476 aattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagc 7758403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 51038817 - 51038890
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51038817 aattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagc 51038890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 54539829 - 54539756
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  54539829 aattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttagc 54539756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 54540817 - 54540890
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  54540817 aattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 54540890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29931300 - 29931227
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||| ||||||||  |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  29931300 aattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagc 29931227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29980454 - 29980381
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||| ||||||||  |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  29980454 aattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagc 29980381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 7267717 - 7267647
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||    
T  7267717 aattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcacttta 7267647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 19984923 - 19984844
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatta 80  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| ||| ||| ||| |||||||||||||||||| |||||    
T  19984923 aattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcctatta 19984844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22776839 - 22776912
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||| ||||||| ||||||||||| ||| | ||||||| ||||||||||||||||||||||    
T  22776839 aattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactttagc 22776912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 47609771 - 47609698
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| ||||||    
T  47609771 aattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcattttagc 47609698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 49216321 - 49216248
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| ||| ||| | ||||||||||||||||||||    
T  49216321 aattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagc 49216248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12700247 - 12700176
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||  || || |||||||||||||||    
T  12700247 aattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta--ggggggaaagtgcactttagc 12700176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29932726 - 29932798
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||||||  || ||||||||||||||||||    
T  29932726 aattgtagtttttgtacttaggggc-caaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 29932798  T

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Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29981880 - 29981952
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||||||  || ||||||||||||||||||    
T  29981880 aattgtagtttttgtacttaggggc-caaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 29981952  T

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Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 46720015 - 46719942
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||| ||| ||||||| |||||| |||| ||||||||||||||||| |||||| |||||||||||    
T  46720015 aattgtagtttttatacatagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcactttagc 46719942  T

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Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 46721247 - 46721320
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||| |||||||| ||||| |||| ||||||||||||| |||  |||||||||||||||||    
T  46721247 aattgtagtttttgtacatagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcactttagc 46721320  T

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Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 47615591 - 47615648
Alignment:
Q  17 cttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  47615591 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 47615648  T

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Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 55192022 - 55192083
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaa 62  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| ||||||    
T  55192022 aattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggggggaaaa 55192083  T

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Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 47610607 - 47610678
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| |||||||  || ||||||||||||||||    
T  47610607 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 47610678  T

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Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 5001274 - 5001196
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatt 79  Q
    |||||| ||||| |||||||||||| |||||||||||| |||| |||| || ||| |||||||||||||||||| ||||    
T  5001274 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagcctatt 5001196  T

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Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24516534 - 24516464
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttt 71  Q
    ||||||||||||| ||||||||| | ||||||||||||||||| ||||||| ||| | |||||||||||||    
T  24516534 aattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcacttt 24516464  T

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Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34019172 - 34019226
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggg 55  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||    
T  34019172 aattgtagtgtttgtacctagggggtcaaaattgcaagtttttgaaagttaaggg 34019226  T

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Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 534573 - 534500
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||| |||| |||||||||||||||||||| | |||||  || | ||||||||||||||||    
T  534573 aattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcactttagc 534500  T

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Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6170346 - 6170281
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgc 66  Q
    ||||||| |||||||||||| ||| |||||||||||||||||| ||||||| ||||| ||||||||    
T  6170346 aattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagttatgggtgaaaaagtgc 6170281  T

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Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 51037609 - 51037537
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||| | ||| ||||||||||||||| ||||| |||||||||||  |||||||||||||||||    
T  51037609 aattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaaggg-agaaaagtgcactttagc 51037537  T

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Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 51470046 - 51469973
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| ||| ||| ||  ||||||||||||||||||    
T  51470046 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagc 51469973  T

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Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 53616043 - 53616119
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagctta 77  Q
    ||||||||||||||||| || ||  | |||||| ||||| ||||||||||||||| |||||||||||||||| ||||    
T  53616043 aattgtagtttttgtacataaggaattaaaattacaagtgtttaaaagttaagggaggaaaagtgcactttatctta 53616119  T

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Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 7268854 - 7268924
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||| | |||||||| || ||||||||||||||||| |||||| |||| ||||||||||||||||    
T  7268854 aattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 7268924  T

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Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8456551 - 8456477
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagctt 76  Q
    |||||||||||||||| |||||||  ||||||||||||||||| ||| || |||| | ||||||||||||||||||    
T  8456551 aattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaaatt-agggggaaaaagtgcactttagctt 8456477  T

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Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 535809 - 535882
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||| |||||||  |||||| |||  ||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  535809 aattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagc 535882  T

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Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6249683 - 6249618
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgc 66  Q
    |||||||||||||||||||| ||| | |||||||||||||||| ||||||| || || ||||||||    
T  6249683 aattgtagtttttgtacttaagggattaaaattgcaagtttttgaaagttatggatgaaaaagtgc 6249618  T

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Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 12703527 - 12703599
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||| |||||| || | | ||||||||||||||||    
T  12703527 aattgtagtttttgtacttagggggccaaaattacaaatttttgaaagtt-agagggaaaaagtgcactttagc 12703599  T

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Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23769931 - 23769862
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactt 70  Q
    |||||||||||||| || ||| || | |||||||||| || || ||||||||||||||||||||||||||    
T  23769931 aattgtagtttttgcacatagaggattaaaattgcaacttgttgaaagttaagggtggaaaagtgcactt 23769862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 47614259 - 47614186
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||||  ||||||||||| ||||||||||||||||| |||||||  || | ||||||||||||||||    
T  47614259 aattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcactttagc 47614186  T

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Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 51470482 - 51470554
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| ||||||||||| || ||||||||||||||| |||||| |||| |||| |||||||||||||    
T  51470482 aattgtggttttggtacttaggggatctaaattgcaagtttttgaaagtt-aggggggaagagtgcactttagc 51470554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 53901416 - 53901486
Alignment:
Q  2 attgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||| || ||||||||||||| ||||| ||| |||  || ||||||||||||||||||    
T  53901416 attgtagtttttgtacttaaggagtcaaaattgcaacttttttaaactta--gggggaaaagtgcactttagc 53901486  T

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Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19986097 - 19986172
Alignment:
Q  1 aattgtagtttttgtacttagg--gggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||| ||| ||||  ||| ||||||||||||||||| ||| ||||| | ||||||||||||||||||    
T  19986097 aattgtagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttagc 19986172  T

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Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5029710 - 5029782
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| ||||||||| || |||||||||||| |||| |||| | |||| ||||||||||||||||||    
T  5029710 aattgtggttttggtacttaggaggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagc 5029782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 52840631 - 52840704
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||||  || |||||| | ||||||||||||||||| ||||||| ||| ||||||| ||||||||||    
T  52840631 aattgttgttttgataattagggagccaaaattgcaagtttttgaaagttaggggaggaaaagggcactttagc 52840704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31645047 - 31645000
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaag 48  Q
    |||||||||||||| |||||||||| |||||||| |||||||| ||||    
T  31645047 aattgtagtttttgcacttagggggccaaaattgtaagtttttgaaag 31645000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 11671371 - 11671440
Alignment:
Q  4 tgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||| || ||||||||  |||||||||||||||| |||||| |||  | ||||||||||||||||    
T  11671371 tgtagtttttatatttagggggctaaaattgcaagtttttgaaagtt-aggcggaaaaagtgcactttagc 11671440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Original strand, 31214506 - 31214536
Alignment:
Q  25 gtcaaaattgcaagtttttaaaagttaaggg 55  Q
    |||||||||||||||||||||||||||||||    
T  31214506 gtcaaaattgcaagtttttaaaagttaaggg 31214536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 53614866 - 53614820
Alignment:
Q  28 aaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||| |||||||| ||||||||||| |||||| |||||||||||    
T  53614866 aaaattgtaagtttttgaaagttaagggaggaaaaatgcactttagc 53614820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8875980 - 8875907
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||| || ||||  |||||||||  |||||  || |||||||  |||||||||||||||||    
T  8875980 aattgtagtttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagc 8875907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 28263158 - 28263211
Alignment:
Q  21 gggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||| |||||| ||||  |||||||||||| ||| ||||||||||||||||||    
T  28263158 gggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcactttagc 28263211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 52839111 - 52839038
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||| ||||||||||| ||| |||||  ||||||  || |||||| |||||||||||    
T  52839111 aattgttgttttggtacttagagggtcaaaattacaaatttttggaagttagagggggaaaattgcactttagc 52839038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 55191585 - 55191544
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttt 42  Q
    |||| ||||||||||| |||||| ||||||||||||||||||    
T  55191585 aattatagtttttgtatttagggtgtcaaaattgcaagtttt 55191544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 40426837 - 40426877
Alignment:
Q  32 ttgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||| ||||| ||||||||||| ||||||||||||||||    
T  40426837 ttgcaacttttttaaagttaaggggggaaaagtgcacttta 40426877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 6e-27; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24422874 - 24422801
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  24422874 aattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcactttagc 24422801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 52275042 - 52274969
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | ||||||||||||||||    
T  52275042 aattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagc 52274969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14999358 - 14999286
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| |||||||||    
T  14999358 aattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaagtacactttagc 14999286  T

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Target: chr1; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36613931 - 36614004
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||| |||||||||||    
T  36613931 aattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagc 36614004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 51684440 - 51684367
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||| ||| ||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  51684440 aattgtagtttttatacatagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcactttagc 51684367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 52827421 - 52827348
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  52827421 aattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagc 52827348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11437226 - 11437299
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||||| |||  ||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  11437226 aattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagc 11437299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35594290 - 35594218
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||  |||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  35594290 aattgtagttttaatacttagggg-tcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagc 35594218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 39698637 - 39698564
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||| |||||| ||||||||||||| |||||||| |||||||||||||||||||| || |||||||||||||||    
T  39698637 aattatagtttctgtacttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagc 39698564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39699794 - 39699866
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||| |||||||||||||||||||||||||||| || |||||| |||| ||||||||||||||||||    
T  39699794 aattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagtt-aggggggaaaagtgcactttagc 39699866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 24426102 - 24426173
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||  || || |||||||||||||    
T  24426102 aattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagaggggggaaagtgcacttta 24426173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 43058859 - 43058789
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||| | ||||||| ||||||    
T  43058859 aattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaagtt-agggggaaaaagtgtacttta 43058789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23980493 - 23980566
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||| |||||||||||||||||| | ||||||||||||||||| |||||||  || ||||||||||||||||||    
T  23980493 aattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcactttagc 23980566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 39222501 - 39222574
Alignment:
Q  2 attgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aagggtggaaaagtgcactttagc 74  Q
    |||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||| | ||||||||||||||||    
T  39222501 attgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgcactttagc 39222574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 45148654 - 45148582
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| | | ||||||||||||||||    
T  45148654 aattgtagttttt-tacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcactttagc 45148582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 14999983 - 15000055
Alignment:
Q  2 attgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||| ||  | ||||||| ||||||||    
T  14999983 attgtagattttgtacttaggggatcaaaattgcaagtttttaaaagttagggaggaaaaagtgaactttagc 15000055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 39153143 - 39153214
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||||||||| || |||| ||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  39153143 aattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 39153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 45149998 - 45150068
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||| ||||||||||||| |||| ||||||||||||||||| |||||| |||| ||||||||||||||||    
T  45149998 aattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 45150068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7674600 - 7674524
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatt 79  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||| |||| ||||||| |||||||||| ||||    
T  7674600 aattgtagtttttgtacttagggcc-caaaattgcaagtttttaaaagtt-aggggggaaaagggcactttagcctatt 7674524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 35067029 - 35067107
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatt 79  Q
    ||||||||||||||| | ||||||| |||||| |||| ||||| ||| ||||||| |||||||||||||||||| ||||    
T  35067029 aattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcactttagcctatt 35067107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11436116 - 11436043
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||| ||||||   || ||||||||||||||||| |||||||| || ||||||||||||||||||    
T  11436116 aattgtagtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcactttagc 11436043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33088644 - 33088717
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||  ||||||||||||||||||||| || ||||  |  ||||||||||||||||||    
T  33088644 aattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcactttagc 33088717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45157236 - 45157308
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| ||| || |||| || |||||||||||||||    
T  45157236 aattgtagtttttgtacatagggggccaaaattgcaagtttttgaaactt-agggggggaaagtgcactttagc 45157308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 39152005 - 39151934
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||||||||| ||||||| ||||||| ||||||||| ||| ||||||| | |||| |||||||||    
T  39152005 aattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaaaatgcacttta 39151934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 43378740 - 43378810
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||| |||||||||||||||| ||||||||| |||||||| ||||||||| |  |||||||||||||||    
T  43378740 aattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaagag-agaaaagtgcacttta 43378810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 45156123 - 45156052
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||||||||| |||  ||||||||||| |||||||| ||| ||||||| ||||||||| ||||||    
T  45156123 aattgtagtttttgtacatagaaggtcaaaattgtaagtttttgaaacttaagggaggaaaagtgaacttta 45156052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 50680405 - 50680335
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||| |||||||| ||||||||||| |||||||||||||||||  |||||||||| |||||| |||||||||    
T  50680405 aattatagtttttatacttagggggccaaaattgcaagtttttggaagttaaggg-ggaaaaatgcacttta 50680335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41364902 - 41364830
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| ||| |||||||| ||||||||||||||||| |||||| ||||  |||||||||||||||||    
T  41364902 aattgtggttttggtatttagggggccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcactttagc 41364830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43060033 - 43060106
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||||| |||||||||||| ||| ||||| |||||||  || || ||||| |||||||||    
T  43060033 aattgtagtttttgtacttaaggggtcaaaatttcaaatttttgaaagttagagggggtaaagtacactttagc 43060106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 51685792 - 51685865
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||| ||| ||| |||||| |||| ||||| |||||||  || ||||||||||||||||||    
T  51685792 aattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 51685865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 50681632 - 50681704
Alignment:
Q  2 attgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||| || |||| | | ||||||||||||||||| ||| ||||| | ||||||||||||||||||    
T  50681632 attgtagtttttatagttagagagccaaaattgcaagtttttgaaaattaagaggggaaaagtgcactttagc 50681704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 37526904 - 37526975
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||| |||| | || |||||| | ||||||||||||||||| ||||||||||| |||||||| |||||||    
T  37526904 aattgtggtttctatatttagggagccaaaattgcaagtttttgaaagttaaggggggaaaagtacacttta 37526975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 52828097 - 52828168
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||| ||||| |||||||||| | ||||||||||||||||| ||| |||  || ||||||||||||||||    
T  52828097 aattgtggttttggtacttagggagccaaaattgcaagtttttgaaaattagagggggaaaagtgcacttta 52828168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11190459 - 11190377
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttattaaaa 83  Q
    ||||| ||||||||||  |||||   ||||||||||| ||||||||| |||||||  ||||||||||||||||| || |||||    
T  11190459 aattgcagtttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagcctaataaaa 11190377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 7675494 - 7675558
Alignment:
Q  9 tttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||| |||||||| || ||||||||||||||||| |||||||| ||||| ||||| |||||||||    
T  7675494 tttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtgg-aaagtacactttagc 7675558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 12390016 - 12390081
Alignment:
Q  9 tttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||| |||||| ||||||| |||| ||||| ||||||||||  |||||| |||||||||||    
T  12390016 tttttgtacataggggatcaaaatcgcaactttttgaaagttaaggagggaaaaatgcactttagc 12390081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 35595224 - 35595293
Alignment:
Q  6 tagtttttgtacttagggggtcaaaattgc-aagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||| ||| ||||||||||||||||| |||||||| |||||||  || |||||||| |||||||||    
T  35595224 tagtttttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtacactttagc 35595293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36612926 - 36612854
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||||| |    ||||||||||| ||||| ||||||||||| |||||| |||||||||||    
T  36612926 aattgtagtttttgtacttaagatc-caaaattgcaaatttttgaaagttaaggggggaaaaatgcactttagc 36612854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 44404516 - 44404443
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||| ||||||||||||||||||||  |||||||| ||||||| ||||||| | | | ||||||||| ||||||    
T  44404516 aattatagtttttgtacttagggggctaaaattgctagtttttgaaagttatgagggaaaaagtgcattttagc 44404443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 2260629 - 2260680
Alignment:
Q  26 tcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagctta 77  Q
    ||||||| |||| ||||||||| |||||||  ||||||||||||||||||||    
T  2260629 tcaaaatcgcaactttttaaaacttaagggatgaaaagtgcactttagctta 2260680  T

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Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 52276195 - 52276261
Alignment:
Q  6 tagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||||||||||||||||| ||||||| ||| ||||| |||||||   | || |||||||||||||    
T  52276195 tagtttttgtacttagggggccaaaattacaaatttttgaaagttagaagggggaaagtgcacttta 52276261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 41366157 - 41366230
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||||  |||||| ||||  ||||||||| |||||| ||||||| | | ||||||||||||||||||    
T  41366157 aattgtggttttgatacttaaggggctaaaattgcatgtttttgaaagttaggaggggaaaagtgcactttagc 41366230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 48441137 - 48441093
Alignment:
Q  3 ttgtagtttttgtacttagggggtcaaaattgcaagtttttaaaa 47  Q
    ||||||||||| || ||| |||||||||||||||| |||||||||    
T  48441137 ttgtagtttttttatttaaggggtcaaaattgcaattttttaaaa 48441093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 9e-26; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 29968364 - 29968434
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  29968364 aattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaaggg-ggaaaagtgcacttta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1823626 - 1823553
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||| |||||||||    
T  1823626 aattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagc 1823553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1858071 - 1857998
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||| |||||||||    
T  1858071 aattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagc 1857998  T

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Target: chr8; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22221391 - 22221464
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  22221391 aattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagc 22221464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22227733 - 22227806
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  22227733 aattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagc 22227806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12351995 - 12351922
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||| |||||||||||    
T  12351995 aattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagc 12351922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30335713 - 30335640
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||| ||||||||||||| | | |||||||||||||||||||||||||||||||||||| |||||||||||    
T  30335713 aattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcactttagc 30335640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10007790 - 10007863
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||| | ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  10007790 aattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 10007863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 12353396 - 12353459
Alignment:
Q  10 ttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  12353396 ttttgtacttagggggccaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttagc 12353459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 11287850 - 11287779
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  11287850 aattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 18979147 - 18979225
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatt 79  Q
    ||||||||||||| || |||||||| |||||||||||||| || ||||||| ||| |||||||||||||||||| ||||    
T  18979147 aattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcactttagcgtatt 18979225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5514055 - 5513983
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||| |||| | ||||||||||||||||    
T  5514055 aattgtagtttttgtacttagggggccaaaattggaagtttttgaaagtt-agggggtaaaagtgcactttagc 5513983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22220462 - 22220389
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||| ||| ||||||||||||||||||||| ||| |||||||  || ||||||||||||||||||    
T  22220462 aattgtagtttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcactttagc 22220389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24122956 - 24122884
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||| |||||||||||||||||||||||||||||||| ||||| |||||| |||| |||||| |||||||||||    
T  24122956 aattatagtttttgtacttagggggtcaaaattgcaaattttttaaagtt-aggggggaaaaatgcactttagc 24122884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 32207352 - 32207423
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || ||||  || || |||||||||||||||    
T  32207352 aattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggtta--ggggggaaagtgcactttagc 32207423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1824105 - 1824174
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactt 70  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||||||  || |||||| |||||||    
T  1824105 aattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1858550 - 1858619
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactt 70  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||||||  || |||||| |||||||    
T  1858550 aattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 10006418 - 10006345
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||||  ||||||||||| ||||||||||||||||| |||||||  || ||||||||||||||||||    
T  10006418 aattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 10006345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43661850 - 43661919
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactt 70  Q
    |||| |||||||||||| ||| || | |||||||||| ||||| ||||||||||||||||||||||||||    
T  43661850 aattttagtttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcactt 43661919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 29043472 - 29043400
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttag 73  Q
    ||||||||||||||||| |||||||||||||| || | ||||| || |||||||| ||||||||| |||||||    
T  29043472 aattgtagtttttgtacatagggggtcaaaatcgcgactttttgaaggttaagggaggaaaagtgaactttag 29043400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 11282074 - 11282011
Alignment:
Q  9 tttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||  ||||||| ||||||||||| ||||||||||||||||| | ||||||||||||||    
T  11282074 tttttgtatatagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcacttta 11282011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18970984 - 18970920
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgc 66  Q
    ||||||||||||||||||||||||| |||||||| ||| |||| |||||| |||| ||||||||||    
T  18970984 aattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18970920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18978093 - 18978029
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgc 66  Q
    ||||||||||||||||||||||||| |||||||| ||| |||| |||||| |||| ||||||||||    
T  18978093 aattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42982684 - 42982757
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||    |||||| ||||||| ||| ||||||||| |||| |||||||||||||||||||||    
T  42982684 aattgtagtttttgtttacagggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcactttagc 42982757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 8389716 - 8389787
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||||||||| || |||  ||||||||||| ||||| ||| ||||| | ||||||||||||||||    
T  8389716 aattgtagtttttgtacataagggaccaaaattgcaactttttgaaacttaagaggggaaaagtgcacttta 8389787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 11288914 - 11288965
Alignment:
Q  28 aaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatt 79  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||| ||||    
T  11288914 aaaattgcaagtttttgaaagttaggggtgaaaaagtgcactttagcctatt 11288965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8388536 - 8388465
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||| |||||||||||| |||||||  |||||||||| |||||||||||||  || || |||||||||||||||    
T  8388536 aattatagtttttgtacatagggggctaaaattgcaactttttaaaagtta--ggggggaaagtgcactttagc 8388465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 23170034 - 23170097
Alignment:
Q  9 tttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||| |||||||||||||||||| ||| || |||| |||||| |||||||||||    
T  23170034 tttttgtacttaggggatcaaaattgcaagtttttgaaaatt-aggggggaaaa-tgcactttagc 23170097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30336528 - 30336601
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||||||| ||  ||||||  |||||||| ||||||| ||| | | ||||||||||||||    
T  30336528 aattgtagtttttgtacttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcactttagc 30336601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 45114543 - 45114612
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactt 70  Q
    ||||||||||| ||||| ||| |   ||||||||||||||||| ||||||| ||| ||||||||||||||    
T  45114543 aattgtagtttgtgtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgcactt 45114612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 24483200 - 24483144
Alignment:
Q  18 ttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||| ||||||||||||||||| ||| ||| | | ||||||||||||||||||    
T  24483200 ttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagc 24483144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 43661339 - 43661267
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttag 73  Q
    |||| |||||||||||| || |||  |||||||| || ||||| ||| |||||||| ||||||||||||||||    
T  43661339 aattatagtttttgtacataagggaccaaaattgtaacttttttaaaattaagggtagaaaagtgcactttag 43661267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 36249600 - 36249553
Alignment:
Q  27 caaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||| ||||| ||| ||||||| ||||||||||||||||||    
T  36249600 caaaattgcaactttttgaaacttaaggggggaaaagtgcactttagc 36249553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 40471174 - 40471244
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||||||||||||| ||| ||   |||||||| |||||||| |||||||| || ||||||||||||||||    
T  40471174 aattgtagtttttgtatttatggac-caaaattgtaagttttttaaagttaaagggggaaaagtgcacttta 40471244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 1e-24; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31599863 - 31599794
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||    
T  31599863 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcactt 31599794  T

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Target: chr4; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 31601012 - 31601085
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  || | ||||||||||||||||    
T  31601012 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcactttagc 31601085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 48780322 - 48780249
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  48780322 aattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcactttagc 48780249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19750602 - 19750673
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttag 73  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  19750602 aattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 19750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19789204 - 19789133
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttag 73  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  19789204 aattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 19789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 49308054 - 49308131
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatt 79  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||| |||| |||||||||||||||||| ||||    
T  49308054 aattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcctatt 49308131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1290225 - 1290298
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||||||| ||| |||||||||||| |||| ||||||||||| ||||||||||||||||||    
T  1290225 aattgtagtttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcactttagc 1290298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1835129 - 1835202
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||  ||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||    
T  1835129 aattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcactttagc 1835202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1964468 - 1964541
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||| | ||||||| |||||||| || ||||||||||||||||||||||||||||||||||||    
T  1964468 aattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagc 1964541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10471415 - 10471488
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  10471415 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 10471488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 8758864 - 8758935
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  8758864 aattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttta 8758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 12129697 - 12129626
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||||||||||||||||| |||| ||||||||||||||||| ||||||||| | ||||||||||||||||    
T  12129697 aattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcacttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 26421649 - 26421730
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttattaaaa 83  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||| || | |||||||||||||||||| || |||||    
T  26421649 aattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagcctaataaaa 26421730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1963270 - 1963197
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||| |||| || ||||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  1963270 aattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagc 1963197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 10470612 - 10470547
Alignment:
Q  9 tttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  10470612 ttttggtacttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 10470547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25685008 - 25684935
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  25685008 aattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagc 25684935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 35935560 - 35935631
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||| |||||||||||||  |||||||||| ||||||||||||||||| || |||||||||||||    
T  35935560 aattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttta 35935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1834193 - 1834120
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||| ||| |||||||||||||||| |||||||| |||||||  || ||||||||||||||||||    
T  1834193 aattgtagtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgcactttagc 1834120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25685849 - 25685922
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| |||||||  || ||||||||||||||||||    
T  25685849 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 25685922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 52491634 - 52491707
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||| |||| |||| ||  ||||||||||||||||| |||||||||||||||||||| |||||||||    
T  52491634 aattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacactttagc 52491707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21539098 - 21539162
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtg 65  Q
    |||||||||||||  ||||||| || ||||||||||||||||||||| |||||||||||||||||    
T  21539098 aattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaagtg 21539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13386559 - 13386633
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtgg-aaaagtgcactttagc 74  Q
    |||||| ||||| ||||||| |||||||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  13386559 aattgtggttttggtacttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactttagc 13386633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5525433 - 5525361
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||| |||| |||||| || ||||||||    
T  5525433 aattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaaatgtactttagc 5525361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8757748 - 8757676
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||| |||||||||||||  ||||||| |||||||| ||||||||||| | ||||||||||||||||    
T  8757748 aattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagttaaggg-gaaaaagtgcactttagc 8757676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17383066 - 17382994
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||||| |||  ||||||||||||||||| |||||| ||||  |||||||||||||||||    
T  17383066 aattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcactttagc 17382994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17388238 - 17388310
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||| |||||||| |||  ||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  17388238 aattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagc 17388310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 13386089 - 13386006
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagt-ttttaaaagttaagggtggaaaagtgcactttagcttattaaaa 83  Q
    |||||| ||||| |||||||||||| ||||||||||||| |||| |||||||  || |||||||||||||||||| || |||||    
T  13386089 aattgtggttttggtacttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcactttagcctagtaaaa 13386006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5526153 - 5526225
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||||  ||||||||||| ||||||||||||||||| |||||| || | ||||||||||||||||||    
T  5526153 aattgtggttttgttacttagggggccaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagc 5526225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13509386 - 13509458
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||  ||||| ||||| ||||||||||| |||||||||||| |||| |||||||| |||||||||    
T  13509386 aattgtagttttcatacttggggggccaaaattgcaattttttaaaagtt-aggggggaaaagtacactttagc 13509458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1289171 - 1289100
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||||| ||||||| || |||||||| ||| | ||| ||||||||||| |||||||| |||||||    
T  1289171 aattgtagtttttatacttagaggatcaaaattacaaatatttgaaagttaaggggggaaaagttcacttta 1289100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 55603562 - 55603628
Alignment:
Q  5 gtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||||||||||  ||||| | |||||||||||||||| ||||||||||| | ||||||||||||||    
T  55603562 gtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaaggg-gaaaaagtgcacttta 55603628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 10447081 - 10447007
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaag-ggtggaaaagtgcactttagc 74  Q
    |||||| |||||||||| |||||||  |||||||||| ||||| ||| ||||| || ||||||||||||||||||    
T  10447081 aattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcactttagc 10447007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27257987 - 27258041
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggg 55  Q
    ||||| ||||||||||  ||| ||||||||||||||| |||||||||||||||||    
T  27257987 aattggagtttttgtatatagagggtcaaaattgcaactttttaaaagttaaggg 27258041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37728592 - 37728642
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 51  Q
    ||||||||||||||||| |||| || ||||||||||| |||||||||||||    
T  37728592 aattgtagtttttgtacataggaggccaaaattgcaactttttaaaagtta 37728642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 50909700 - 50909773
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtgg-aaaagtgcactttagc 74  Q
    ||||||||||||| ||| ||||| |||||||| |||| ||||||||| || ||||||| ||||||||||||||||    
T  50909700 aattgtagtttttatacatagggagtcaaaatcgcaactttttaaaactt-agggtggaaaaagtgcactttagc 50909773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8155811 - 8155741
Alignment:
Q  1 aattgtagtttttgtacttagggggtc-aaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||||||||||| |||||||||  | |||||||||||||||| |||||||  || ||||||||||||||||    
T  8155811 aattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 8155741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3927740 - 3927667
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||  ||| | ||||| |||||| ||||  ||||||||||||  || ||||||||||||||||||    
T  3927740 aattgtagttttcatacatggggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcactttagc 3927667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3928885 - 3928958
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||||  ||| ||||||| |||||| ||||  |||| ||||||| ||| ||||||||||||||||||    
T  3928885 aattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagc 3928958  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10448287 - 10448360
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||| |||||||  ||||| |||| ||||| ||| ||| ||| ||  ||||||||||||||    
T  10448287 aattgtagtttttgtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcactttagc 10448360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14868963 - 14868891
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||||  ||||||| ||| |||||||||||| |||| |||| | |||| ||||||||||||||||||    
T  14868963 aattgtggttttgatacttagcgggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagc 14868891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14876971 - 14877043
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||||  ||||||| ||| |||||||||||| |||| |||| | |||| ||||||||||||||||||    
T  14876971 aattgtggttttgatacttagcgggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagc 14877043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21178070 - 21177998
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||| | |||||| |||||||||||| ||| | |||||| |||| || ||||| |||||||||    
T  21178070 aattgtagtttttgttcataggggatcaaaattgcaactttatgaaagtt-agggggggaaagtacactttagc 21177998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48781073 - 48781145
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| ||||||||||   ||||||||||| ||||| |||||||  || ||||||||||||||||||    
T  48781073 aattgtggttttagtacttagggac-caaaattgcaaatttttgaaagttagagggggaaaagtgcactttagc 48781145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 49306848 - 49306799
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt 50  Q
    ||||||||||||||||||||   || ||||||||||||||||| ||||||    
T  49306848 aattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaagtt 49306799  T

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Target: scaffold0294 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5465 - 5538
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||| ||| ||| ||||||||||||||||||    
T  5465 aattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcactttagc 5538  T

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Target: scaffold0294; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4516 - 4443
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||| |||||||||||| ||||  ||||||| |||||||| ||| ||| ||| | ||| ||||||||||||    
T  4516 aattgtaatttttgtacttaaggggctaaaattgtaagtttttgaaaattaggggggaaaatgtgcactttagc 4443  T

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Target: scaffold0045 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 49111 - 49184
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||  |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  49111 aattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaatttagc 49184  T

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Target: scaffold0019 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 60164 - 60091
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  60164 aattgtagtttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcactttagc 60091  T

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Target: scaffold0019; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 61486 - 61561
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagctt 76  Q
    |||| ||||||||||||||||||||  |||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  61486 aattatagtttttgtacttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcactttagctt 61561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 1e-21; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17781735 - 17781663
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttag 73  Q
    |||||| ||||| |||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  17781735 aattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttag 17781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3227621 - 3227703
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttattaaaa 83  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||| || |||||    
T  3227621 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcctaataaaa 3227703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 31659697 - 31659623
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtgg-aaaagtgcactttagc 74  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||| ||| || ||||||||||||||||    
T  31659697 aattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcactttagc 31659623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18371498 - 18371425
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||||||| |||| ||||||||||||||||| ||||||| | | ||||||||||||||||||    
T  18371498 aattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagc 18371425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22630479 - 22630552
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||||| ||  ||||||||||||||||||    
T  22630479 aattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagttatggagggaaaagtgcactttagc 22630552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48934930 - 48935003
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||| |||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||| |||||||||||    
T  48934930 aattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcactttagc 48935003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 20163585 - 20163656
Alignment:
Q  3 ttgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||| ||||| | ||||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagc 20163656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11658453 - 11658380
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||||| |||||||  ||||||||| |||||| ||||||||||| ||||||||||| ||||||    
T  11658453 aattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagc 11658380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17782580 - 17782653
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| |||||||  || ||||||||||||||||||    
T  17782580 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 17782653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 128628 - 128699
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||| ||||| |||||||||||||||||||||||| ||||| ||||||| ||  ||||||||||||||||    
T  128628 aattgtggttttggtacttagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcacttta 128699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 31949829 - 31949908
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatta 80  Q
    |||||| ||||| ||| |||||||| ||||||||||||||||| ||||||| ||| |||| ||||||||||||| |||||    
T  31949829 aattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttagggggggaagagtgcactttagcctatta 31949908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 42886313 - 42886384
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||||||||||||| |||||||||||||||||||| ||||| ||||||| | |  |||||||||||||||    
T  42886313 aattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcacttta 42886384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7501879 - 7501961
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttattaaaa 83  Q
    |||||| |||||  ||||||||||| ||||||||||||||||| |||||||  || |||||||||||||||||| || |||||    
T  7501879 aattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctaataaaa 7501961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14999182 - 14999249
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactt 70  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||  | |||| ||||||||||||||    
T  14999182 aattgtagtttttgtatttagggggtcaaaattgcaagttttgaaaa--ttaggggggaaaagtgcactt 14999249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 127410 - 127338
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||  ||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  127410 aattgtggttttggtacttaggggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagc 127338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7500528 - 7500456
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||| | ||||||| || |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  7500528 aattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttagc 7500456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 31949396 - 31949323
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| ||| ||| ||  ||||||||||||||||||    
T  31949396 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagc 31949323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcac 68  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| |||||||  || ||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18372484 - 18372526
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagttttt 43  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  18372484 aattgtagtttttgtacttagggggccaaaattgcaagttttt 18372526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 769479 - 769414
Alignment:
Q  9 tttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||||  ||||||||||||||||||| ||| |||  ||||||||| |||||||||||    
T  769479 tttttgtacttaggatgtcaaaattgcaagtttttgaaaattacaggtggaaaattgcactttagc 769414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3227181 - 3227109
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| ||| || |||| || |||||||||||||||    
T  3227181 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaaatt-agggggggaaagtgcactttagc 3227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22629560 - 22629477
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaag---ggtggaaaagtgcactttagcttattaa 81  Q
    |||||||||||||||||||||| || ||||||| ||||||||| ||| |||||   || |||||| ||||||||||| ||||||    
T  22629560 aattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggagggggaaaaatgcactttagcctattaa 22629477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34174010 - 34174082
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| ||||| |||||||||||| |||||||||||| |||| |||| | |||| ||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagc 34174082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 47525394 - 47525467
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||||  |||||||||||  |||||||||||||||| |||||||  || ||||||||||||||||||    
T  47525394 aattgtggttttgatacttagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 47525467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 11662578 - 11662649
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||| |||||||||||| ||| | |  |||||||||||||||| ||||||||||| |||||| |||||||||    
T  11662578 aattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcacttta 11662649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 46483551 - 46483605
Alignment:
Q  17 cttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    |||||||| |||||||| |||||||||||||||||| || ||||||||||||||||    
T  46483551 cttaggggatcaaaattacaagtttttaaaagttaaagg-ggaaaagtgcacttta 46483605  T

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Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 32253441 - 32253498
Alignment:
Q  17 cttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||||||||||||| |||||  || ||||||||||||||||| ||||||||    
T  32253441 cttaggtggtcaaaattgcaactttttgcaacttaagggtggaaaagtgtactttagc 32253498  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21505488 - 21505412
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatt 79  Q
    ||||||||||||||||  | ||||| |||||| |||| ||||| |||||||  || |||||||||||||||||| ||||    
T  21505488 aattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagtta--gggggaaaagtgcactttagcctatt 21505412  T

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Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 31661036 - 31661109
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||| |||||||||||| ||  ||||||||||||||| ||||| |||||||  |  || |||||||||||||||    
T  31661036 aattatagtttttgtacgtaaagggtcaaaattgcaaatttttgaaagttagagaggggaaagtgcactttagc 31661109  T

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Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 47369855 - 47369782
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||| ||||||||||||||| | ||  |||||||||||||||| ||||||| |||   ||||||||| ||||||    
T  47369855 aattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttaggggaaaaaaagtgcattttagc 47369782  T

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Target: scaffold1303 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1513 - 1432
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttattaaa 82  Q
    |||| |||||||| ||| ||||||||||||||||||||||||| |||||||  || |||||||| ||||||||| |||||||    
T  1513 aattatagtttttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacactttagcctattaaa 1432  T

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Target: scaffold0320 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19562 - 19489
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||||| ||||||||||| |||||||||||| |||| ||| ||||||| |||||| |||||||||||    
T  19562 aattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcactttagc 19489  T

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Target: scaffold0059 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4757 - 4832
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagctta 77  Q
    ||||||||||| |||| |||||||| |||||||||| ||||||||||||| |||| || ||||||||||||||||||    
T  4757 aattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagtt-agggagggaaagtgcactttagctta 4832  T

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Target: scaffold2034 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 307 - 234
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||| |||||||||||| ||||||  ||||||||||| ||||| ||||||||||| || |||||||||||||||    
T  307 aattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactttagc 234  T

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Target: scaffold2034; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1005 - 1058
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagg 54  Q
    |||| |||||||||||| || |||  ||||||||||| ||||||||||||||||    
T  1005 aattatagtttttgtacataagggaccaaaattgcaactttttaaaagttaagg 1058  T

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Target: scaffold0632 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3335 - 3407
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||| |||||||||||| || ||||||||||||| |||||||| |||| |||||| ||||||||||||||||||    
T  3335 aattatagtttttgtacctatggggtcaaaattgtaagtttttgaaag-taaggggggaaaagtgcactttagc 3407  T

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Target: scaffold0093 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 2499 - 2565
Alignment:
Q  8 gtttttgtacttagggggtcaaaattgcaag-tttttaaaagttaagggtggaaaagtgcactttagct 75  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||  || |||||||||||||||||||    
T  2499 gtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactttagct 2565  T

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Target: scaffold0093; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 7122 - 7188
Alignment:
Q  8 gtttttgtacttagggggtcaaaattgcaag-tttttaaaagttaagggtggaaaagtgcactttagct 75  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||  || |||||||||||||||||||    
T  7122 gtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactttagct 7188  T

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Target: scaffold0321 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18802 - 18730
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttag 73  Q
    ||||||||||||||| | |||| ||||||||| |||| ||||||||||||||| | | |||||||||||||||    
T  18802 aattgtagtttttgttcataggaggtcaaaatcgcaactttttaaaagttaagagggaaaaagtgcactttag 18730  T

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Target: scaffold0112 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37221 - 37149
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgc-aagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||| |||||||||||||||||||||||||||| || |||||||||| ||  || ||||||||||||||||||    
T  37221 aattgttgtttttgtacttagggggtcaaaattgcaaattttttaaaagata--gggggaaaagtgcactttagc 37149  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 49460 - 49538
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatt 79  Q
    ||||||||||||| |   ||||||| ||||||||||| ||||| |||||||||||  ||||||||||||||||| ||||    
T  49460 aattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcctatt 49538  T

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Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 39392 - 39340
Alignment:
Q  27 caaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcttatt 79  Q
    |||||||| || ||||||||| ||||||| |||||||||||||||||| ||||    
T  39392 caaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcctatt 39340  T

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Target: scaffold0186 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 23152 - 23082
Alignment:
Q  2 attgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||| ||||| |||||||| ||| ||||||||||||||||| |||||||  || ||||||||||||||||||    
T  23152 attgttgttttggtacttagagggacaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagc 23082  T

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Target: scaffold0586 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 6417 - 6346
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 72  Q
    ||||||||||||||||| |||||||  ||||| | || ||||| ||| ||||||| ||||||||||||||||    
T  6417 aattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcacttta 6346  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 15702 - 15739
Alignment:
Q  18 ttagggggtcaaaattgcaagtttttaaaagttaaggg 55  Q
    |||||||||||||||||||| |||||||||||||||||    
T  15702 ttagggggtcaaaattgcaactttttaaaagttaaggg 15739  T

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Target: scaffold0369 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13265 - 13194
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    |||||||||||| |||| |||| |||||||||  ||| ||||| |||||||  || ||||||||||||||||||    
T  13265 aattgtagttttcgtacataggaggtcaaaatcacaactttttcaaagtta--gggggaaaagtgcactttagc 13194  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7442 - 7515
Alignment:
Q  1 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagc 74  Q
    ||||||||||| ||||| |||||||||||||| | || ||||| ||| |||  || ||| ||||||||||||||    
T  7442 aattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttagagggggacaagtgcactttagc 7515  T

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