View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10460_low_23 (Length: 288)
Name: NF10460_low_23
Description: NF10460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10460_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 13 - 275
Target Start/End: Original strand, 46618553 - 46618815
Alignment:
| Q |
13 |
gtattattctgtaggagtggatgtacctggaagaggaaaagaagtgaccaagtttcttctgtaggcgttgtttggctttgaaagcagtttcatctaaggt |
112 |
Q |
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| T |
46618553 |
gtattattctgtaggagtggatgtaccttgaagaggaaaagaagtgaccaagtttcttctgtaggcgttgtttggctttgaaagcagtttcatctaaggt |
46618652 |
T |
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| Q |
113 |
agtagtcattgaagtccatggtgcatccaatgattcctttaggtaagagtctctgtaggtagcataatgttcatgtctgttgtgataatgttctgatctt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46618653 |
agtagtcattgaagtccatggtgcatccaatgattcctttaggtaagagtctctgtaggtagcataatgttcatgtctgttgtgataatgttctgatctt |
46618752 |
T |
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| Q |
213 |
ttccttggtgacaatccaacaccaggtagcctaccagccattcactcttctttacctatgctt |
275 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
46618753 |
ttccttggtgacaatccaacaccaggtagcctaccagccattcactcttctttacctaagctt |
46618815 |
T |
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