View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10461_high_11 (Length: 309)
Name: NF10461_high_11
Description: NF10461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10461_high_11 |
 | |
|
| [»] chr8 (4 HSPs) |
| |
|
| [»] chr4 (3 HSPs) |
| |
|
| [»] chr1 (8 HSPs) |
| |
|
| [»] chr6 (17 HSPs) |
| |
|
Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 28 - 309
Target Start/End: Complemental strand, 15796225 - 15795937
Alignment:
| Q |
28 |
aaaaagggcaagtgagagagacctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacacaaaacctctacagatc-------gactg |
120 |
Q |
| |
|
|||||||| ||| ||| |||| |||||||||| ||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
15796225 |
aaaaagggtaagagagggagatctagaaagcctaagagtcccaaatcactttctgacaccaaatcaaaacactaaacctctacagatcttaccgagactg |
15796126 |
T |
|
| Q |
121 |
gctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgtt |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15796125 |
gctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgtt |
15796026 |
T |
|
| Q |
221 |
gcataatagatgctatatctgattagatttctttaggggcatgtgcagccctatgctttatggcaggctacactttgttttgttgctat |
309 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
15796025 |
gcataatagatgttatatctgattagatttctttaggggcatgtgcagccctatgctttctggcaggctacactttgttttgttgctat |
15795937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 40318802 - 40318487
Alignment:
| Q |
1 |
tacttatcgtaaacgacagaaactgttaaaaagggcaagtgagagagacctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacaca |
100 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||| |||||||| ||||||||||||||||| |
|
|
| T |
40318802 |
tacttatcacaaactacagaaactgttaaaaagggcaagagagggagacctaggaagcccaagagtcccaacgcactttctggcaccaaatcaaaacaca |
40318703 |
T |
|
| Q |
101 |
aaacctctacagatc-------gactggctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggat |
193 |
Q |
| |
|
||||||||| ||||| |||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
40318702 |
aaacctctatagatcttactgagactagctctgatactgtgaatacaagagccaaacatgacattatcaaaagtaatcccaaatatggtgattagaggat |
40318603 |
T |
|
| Q |
194 |
taggaaatttcgttactcatctatgttgcataatagatgctatatctgattagatttctttaggggcatgtgcagccctatgcttt-atggcaggctaca |
292 |
Q |
| |
|
|||||||||| | ||||||||||| |||||||| ||||||||||||||||| || ||||||| |||||||||| ||||||||||| |||||||||||| |
|
|
| T |
40318602 |
taggaaattttgatactcatctattttgcataagagatgctatatctgatttgaattcttta-aggcatgtgcaaccctatgctttcttggcaggctaca |
40318504 |
T |
|
| Q |
293 |
ctttgttttgttgctat |
309 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
40318503 |
ctttgttttgttgctat |
40318487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 48 - 307
Target Start/End: Complemental strand, 2612090 - 2611823
Alignment:
| Q |
48 |
acctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacacaaaacctctacagatc-------gactggctctgatactgtgaataca |
140 |
Q |
| |
|
||||||||||||||||||||||| | |||| ||| |||||||||||||||||||||||||| ||||| ||| |||||||||||||||| |||| |
|
|
| T |
2612090 |
acctagaaagcccaagagtctcatagcactatctggcaccaaatcaaaacacaaaacctctagagatcttattgagaccggctctgatactgtgactaca |
2611991 |
T |
|
| Q |
141 |
agatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatct |
240 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||||||| ||||||| |||||||||||||| | || |||||| | |||| | | ||||||||||||| |
|
|
| T |
2611990 |
agatccaaacatggtgttatcaaaagcaatctcaaatatggtgattagcggattaggaaattttgatattcatcttttttgctttacagatgctatatct |
2611891 |
T |
|
| Q |
241 |
gattagatttctttaggggcatgtgcagccctatgcttt-atggcaggctacactttgttttgttgct |
307 |
Q |
| |
|
||||||| ||||||| || ||| ||||||| |||| ||| ||||||||||| ||| ||||||||||| |
|
|
| T |
2611890 |
gattagaattctttaaggacatatgcagccatatgttttcttggcaggctactcttagttttgttgct |
2611823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 40715986 - 40716032
Alignment:
| Q |
153 |
gatgttatcaaaagcaatcccaaatatgatgattagaggattaggaa |
199 |
Q |
| |
|
|||| ||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
40715986 |
gatgctatcaaaagcaatcctaaatattgtgattagaggattaggaa |
40716032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 41309732 - 41310048
Alignment:
| Q |
1 |
tacttatcgtaaacgacagaaactgttaaaaagggcaagtgagagagacctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacaca |
100 |
Q |
| |
|
|||||||| |||| | ||||||||||||||| |||||| ||| |||||||||||||||||||||||||||| |||||||| |||||| |||||||||| |
|
|
| T |
41309732 |
tacttatcacaaactatagaaactgttaaaaaaggcaagagagggagacctagaaagcccaagagtctcaaagcactttctggcaccaactcaaaacaca |
41309831 |
T |
|
| Q |
101 |
aaacctctacagatc-------gactggctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggat |
193 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||||| |
|
|
| T |
41309832 |
aaacctctacagatcttactgagactggctctgatactgtgaatacaagatccaaacatggtgtaatcaaaatcaatcccaaatatggtgattagaggat |
41309931 |
T |
|
| Q |
194 |
taggaaatttcgttactcatctatgttgcataatagatgctatatctgattagatttctttaggggcatgtgcagccctatgcttt-atggcaggctaca |
292 |
Q |
| |
|
|||||||||| | ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
41309932 |
taggaaattttgatactcatctattttgcataacagatgctatatctgattagaattctttaggggcatgtgcagccctatgctttcttggcaggctaca |
41310031 |
T |
|
| Q |
293 |
ctttgttttgttgctat |
309 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
41310032 |
ctttgttttgttgctat |
41310048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 16 - 309
Target Start/End: Complemental strand, 34161222 - 34160921
Alignment:
| Q |
16 |
acagaaactgttaaaaagggcaagtgagagagacctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacacaaaacctctacagatc |
115 |
Q |
| |
|
||||| |||||||||||||||||| ||| ||||||||||||||||||||||| |||| || ||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
34161222 |
acagacactgttaaaaagggcaagagagggagacctagaaagcccaagagtcccaaagcattttctggcaccaaatcaaaacacaaaaccgctacagatc |
34161123 |
T |
|
| Q |
116 |
-------gactggctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgtta |
208 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||| | || |
|
|
| T |
34161122 |
ctattgagtctggctctgatgctgtgaatacaagatccaaacatggtgttatcaaaagcaatcctaaatatggtgattagaggattaggaaattttgata |
34161023 |
T |
|
| Q |
209 |
ctcatctatgttgcataatagatgctatatctgattagatttctttaggggcatgtgcagccctatgcttt-atggcaggctacactttgttttgttgct |
307 |
Q |
| |
|
||||||||| |||| | | | ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||| |
|
|
| T |
34161022 |
ctcatctattttgctttacatatgctttatctgattagatttctttaggggcatgtgcaaccctatgctttcttggcaagttacactttgttttgttgct |
34160923 |
T |
|
| Q |
308 |
at |
309 |
Q |
| |
|
|| |
|
|
| T |
34160922 |
at |
34160921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 247
Target Start/End: Original strand, 2049026 - 2049118
Alignment:
| Q |
155 |
tgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgattaga |
247 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||| || | ||||||| ||| |||||||| | |||||| |||||||||| |
|
|
| T |
2049026 |
tgttatcaaaagcaatcccaaatattgtgattagaggattaggaaggtttgatactcatgtattttgcataacatctgctatgtctgattaga |
2049118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 34467018 - 34466715
Alignment:
| Q |
1 |
tacttatcgtaaacgacagaaactgttaaaaagggcaagtgagagagacctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacaca |
100 |
Q |
| |
|
|||||||| |||| ||| |||||||||||||||||||| ||| ||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |
|
|
| T |
34467018 |
tacttatcacaaactacaaaaactgttaaaaagggcaagagagggagacctagaaagcccaagagtcccaaagcactttctggcaccaaatcaaaacaca |
34466919 |
T |
|
| Q |
101 |
aaacctctacagatc-------gactggctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggat |
193 |
Q |
| |
|
||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
34466918 |
aaatctctacagatcttactgagactgactctcatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatggtgattagaggat |
34466819 |
T |
|
| Q |
194 |
taggaaatttcgttactcatctatgttgcataatagatgctatatctgattagatttctttaggggcatgtgcagccctatgcttt-atggcaggctaca |
292 |
Q |
| |
|
|||||||||| | ||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||| || |||||||||| |
|
|
| T |
34466818 |
taggaaattttgatactcatctattttgcataacagatgctatatctaattagatttctttaggggcatgtgcagctctatgctttcatagcaggctaca |
34466719 |
T |
|
| Q |
293 |
cttt |
296 |
Q |
| |
|
|||| |
|
|
| T |
34466718 |
cttt |
34466715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 179; Significance: 1e-96; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 13128969 - 13129285
Alignment:
| Q |
1 |
tacttatcgtaaacgacagaaactgttaaaaagggcaagtgagagagacctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacaca |
100 |
Q |
| |
|
|||||||| |||| ||||||||||||||||| |||||| ||| |||||||| |||| |||||||||||||||| |||| | |||||| |||||||||| |
|
|
| T |
13128969 |
tacttatcacaaactacagaaactgttaaaaaaggcaagagagggagacctaaaaagtccaagagtctcaaatctctttttggcaccaactcaaaacaca |
13129068 |
T |
|
| Q |
101 |
aaacctctacagatc-------gactggctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggat |
193 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||||||| ||||||||||| ||| ||||||| |||||||||||||| |||||||||||| |
|
|
| T |
13129069 |
aaacctctacagatcttattgagactggctctaatactgtgaatacaatatccaaacatggtgtcatcaaaatcaatcccaaatatggtgattagaggat |
13129168 |
T |
|
| Q |
194 |
taggaaatttcgttactcatctatgttgcataatagatgctatatctgattagatttctttaggggcatgtgcagccctatgcttt-atggcaggctaca |
292 |
Q |
| |
|
|||||||||| | ||||||| ||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
13129169 |
taggaaattttgatactcatttattttgcataacagatgctatatctgattagaattctttaggggcatgtgcagccctatgctttcttggcaggctaca |
13129268 |
T |
|
| Q |
293 |
ctttgttttgttgctat |
309 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
13129269 |
ctttgttttgttgctat |
13129285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 11 - 309
Target Start/End: Original strand, 3525745 - 3526049
Alignment:
| Q |
11 |
aaacgacagaaactgttaaaaagggcaagtgagagagacctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacacaaaacctctac |
110 |
Q |
| |
|
|||| ||||| ||||||||||||| |||| ||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||| | |||| |
|
|
| T |
3525745 |
aaactacagacactgttaaaaaggtcaagagagggagacctagaaagcccaagagttccaaagcactttctaacaccaaatcaaaacacaat--cgctac |
3525842 |
T |
|
| Q |
111 |
agatc-------gactggctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaattt |
203 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||||||||||| ||||||||| |
|
|
| T |
3525843 |
agatcttactgagattggctctgatactgtgaatacaagatccaaacatggtgttatcaaaagcaatcctagatatggtgattagaggatcaggaaattt |
3525942 |
T |
|
| Q |
204 |
cgttactcatctatgttgcataatagatgctatatctgattagatttctttaggggcatgtgcagccctatgcttt-atggcaggctacactttgttttg |
302 |
Q |
| |
|
| ||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| |
|
|
| T |
3525943 |
tgatactcatctattttgcataacatatgctatatttgattagatttctttaggggcatgtgcagctctatgctttcttggcaggttacactttgttttg |
3526042 |
T |
|
| Q |
303 |
ttgctat |
309 |
Q |
| |
|
||||||| |
|
|
| T |
3526043 |
ttgctat |
3526049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 11 - 309
Target Start/End: Original strand, 27491674 - 27491980
Alignment:
| Q |
11 |
aaacgacagaaactgttaaaaagggcaagtgagagagacctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacacaaaacctctac |
110 |
Q |
| |
|
|||| |||||||| ||||||||||||||| ||| ||||||||| ||||||||||||| ||| | |||||| |||||||||||||||||||| |||||| |
|
|
| T |
27491674 |
aaactacagaaacggttaaaaagggcaagagagggagacctaggaagcccaagagtcccaacgctctttctggcaccaaatcaaaacacaaaatctctac |
27491773 |
T |
|
| Q |
111 |
agatc-------gactggctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaattt |
203 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||| ||||||||||||||| |||||| |
|
|
| T |
27491774 |
agatcttactaagactgactctgatactgtgaatacaagatccaaacttggtgttatcaaaagcaaccccaaatatggtgattagaggattagaaaattt |
27491873 |
T |
|
| Q |
204 |
cgttactcatctatgttgcataatagatgctatatctgattagatttctttaggggcatgtgcagccctatgcttt-atggcaggctacactttgttttg |
302 |
Q |
| |
|
| ||||||||||| |||||||| |||||||||||||||||||| ||||||| | |||||||||||||||||||| | | ||||||||||||| |||| |
|
|
| T |
27491874 |
tgatactcatctattttgcataacagatgctatatctgattagacttctttaaagacatgtgcagccctatgctttcttagtaggctacactttgctttg |
27491973 |
T |
|
| Q |
303 |
ttgctat |
309 |
Q |
| |
|
||||||| |
|
|
| T |
27491974 |
ttgctat |
27491980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 22 - 309
Target Start/End: Original strand, 52315938 - 52316220
Alignment:
| Q |
22 |
actgttaaaaagggcaagtgagagagacctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacacaaaacctctacagatc------ |
115 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
52315938 |
actgttaaaaagggcaagagagggagacctagaaagcccaagagtcccaaagcactttctggcaccaaatcaaaacacaaaaccgctacagatcttattg |
52316037 |
T |
|
| Q |
116 |
-gactggctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatc |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||||| |
|
|
| T |
52316038 |
agactggctctgatactgtgaatacaagatccaaacatggtgttatcaaaagcaatcctagatatggtgattagaggattaggaaattt----------- |
52316126 |
T |
|
| Q |
215 |
tatgttgcataatagatgctatatctgattagatttctttaggggcatgtgcagccctatgcttt-atggcaggctacactttgttttgttgctat |
309 |
Q |
| |
|
|| ||||||| | ||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||| |
|
|
| T |
52316127 |
--tgatgcataacaaatgctttatctgattatatttctttaggggcatgtgcagccctatgctttcttggcaagttacactttgttttgttgctat |
52316220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 309
Target Start/End: Complemental strand, 34106688 - 34106378
Alignment:
| Q |
11 |
aaacgacagaaactgttaaaaagggcaagtgagagaga----cctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacacaaaacct |
106 |
Q |
| |
|
|||| ||| ||||||||||||||||| || |||||||| ||||||||||||||||||| |||| |||||||| |||||| |||||||||||||||| |
|
|
| T |
34106688 |
aaactacataaactgttaaaaagggcgagagagagagagagacctagaaagcccaagagtcccaaagcactttctggcaccaactcaaaacacaaaacct |
34106589 |
T |
|
| Q |
107 |
ctacagatc-------gactggctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaa |
199 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||| ||| |
|
|
| T |
34106588 |
ctaaagatcttattgagactggctctgatactgtgaatacaagatccaaacatggtgtcatcaaaatcaatcccaaatatggggattagaggattatgaa |
34106489 |
T |
|
| Q |
200 |
atttcgttactcatctatgttgcataatagatgctatatctgattagatttctttaggggcatgtgcagccctatgcttt-atggcaggctacactttgt |
298 |
Q |
| |
|
||| ||||||||||| |||||||| ||||| |||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||| || ||||| | |
|
|
| T |
34106488 |
ttttttatactcatctattttgcataacagatgttatatctgattagaattctttaagggcatgtgcaaccctatgctttcttggcaggttatactttat |
34106389 |
T |
|
| Q |
299 |
tttgttgctat |
309 |
Q |
| |
|
||||||||||| |
|
|
| T |
34106388 |
tttgttgctat |
34106378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 116 - 309
Target Start/End: Original strand, 11084543 - 11084737
Alignment:
| Q |
116 |
gactggctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatct |
215 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||| ||| ||||||| |||||| ||||||| ||||| |||||||||||||||| | ||||||||| |
|
|
| T |
11084543 |
gactgcctctgatactgtgaatataagatccaaacatggtgtcatcaaaatcaatcctaaatatggtgattggaggattaggaaattttgatactcatct |
11084642 |
T |
|
| Q |
216 |
atgttgcataatagatgctatatctgattagatttctttaggggcatgtgcagccctatgcttt-atggcaggctacactttgttttgttgctat |
309 |
Q |
| |
|
|| |||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
11084643 |
attttgcataacagatgctatatctgattagaattctttaggggcatgtgcagtcctatgctttcttggcaggctacactttgttttgttgctat |
11084737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 309
Target Start/End: Original strand, 43699226 - 43699522
Alignment:
| Q |
22 |
actgttaaaaagggcaagtgagagagacctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacacaaaacctctacagatc------ |
115 |
Q |
| |
|
|||| ||||||| ||||| ||| ||||||||||||||||||||||| || | |||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
43699226 |
actgctaaaaagagcaagagagtgagacctagaaagcccaagagtcccataacactatctcgcaccaaatcaaaacacaaaacctctacagatcttattg |
43699325 |
T |
|
| Q |
116 |
-gactggctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatc |
214 |
Q |
| |
|
||| |||||||||||||||| |||||||| |||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| | || ||||| |
|
|
| T |
43699326 |
agaccggctctgatactgtgagtacaagattcaaacatggtgttattaaaagcaatcccaaatatggtgattagaggattaggaaattttgatattcatc |
43699425 |
T |
|
| Q |
215 |
-tatgttgcataatagatgctatatctgattagatttctttaggggcatgtgcagccctatgcttt-atggcaggctacactttgttttgttgctat |
309 |
Q |
| |
|
| | ||| | | ||||||||||||| |||||| |||||||||| ||||||||||| |||||||| ||||| ||||||||| ||||||||||||| |
|
|
| T |
43699426 |
tttttttgttttacagatgctatatcttattagaattctttagggacatgtgcagccatatgctttcttggcaagctacacttagttttgttgctat |
43699522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 22 - 270
Target Start/End: Original strand, 41114342 - 41114597
Alignment:
| Q |
22 |
actgttaaaaagggcaagtgagagagacctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacacaaaacctctacagatc------ |
115 |
Q |
| |
|
|||| ||||||||||||| ||| ||||||||||||||||||||||| || | |||| ||| |||||||||||||||||||||||| |||||| |
|
|
| T |
41114342 |
actgctaaaaagggcaagagagggagacctagaaagcccaagagtcccatagcactatctggtaccaaatcaaaacacaaaacctctgcagatctttctg |
41114441 |
T |
|
| Q |
116 |
-gactggctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatc |
214 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| |||||||||||||||||||||| | || ||| | |
|
|
| T |
41114442 |
agatcggctctgatactgtgaatacaagatccaaatatggtgttatcaaaagtaatcccaaatatggtgattagaggattaggaaattttgatattcaac |
41114541 |
T |
|
| Q |
215 |
tatgttgcataatagatgctatatctgattagatttctttaggggcatgtgcagcc |
270 |
Q |
| |
|
| | ||| | | |||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
41114542 |
ttttttgttttacagatgctatatctgattagaattctttagggacatgtgcagcc |
41114597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 145; Significance: 3e-76; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 22 - 296
Target Start/End: Original strand, 21203136 - 21203418
Alignment:
| Q |
22 |
actgttaaaaagggcaagtgagagagacctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacacaaaacctctacagatc------ |
115 |
Q |
| |
|
|||| ||||||||||||| ||| |||||||||||||||||||||||||| | |||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
21203136 |
actgctaaaaagggcaagagagggagacctagaaagcccaagagtctcatagcactatctggcaccaaatcaaaacacaaaacctctacagatcttactg |
21203235 |
T |
|
| Q |
116 |
-gactggctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatc |
214 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||| |
|
|
| T |
21203236 |
agattggctctgatactgtgaatactagatccaaacatggtgttatcaaaagcaatcccaaatatgatgattagaggattaggaaattttgatattcatc |
21203335 |
T |
|
| Q |
215 |
tatgttgcataatagatgctatatctgattagatttctttaggggcatgtgcagccctatgcttt-atggcaggctacacttt |
296 |
Q |
| |
|
| | |||| | | | ||||||||| |||||||| |||||||||| ||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
21203336 |
ttttttgcttcacacatgctatatatgattagaattctttagggacatgtgcagccataagctttcttggcaggctacacttt |
21203418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 45212799 - 45212864
Alignment:
| Q |
182 |
tgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgattaga |
247 |
Q |
| |
|
|||||||||||||||||| || | ||||||| ||| |||||||| ||||||||| ||||||||| |
|
|
| T |
45212799 |
tgattagaggattaggaaggtttgatactcatatattttgcataacagatgctatgcctgattaga |
45212864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 133; Significance: 4e-69; HSPs: 17)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 45 - 309
Target Start/End: Original strand, 8859076 - 8859333
Alignment:
| Q |
45 |
gagacctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacacaaaacctctacagatcgactggctctgatactgtgaatacaagat |
144 |
Q |
| |
|
||||||||||||||||||||||| |||| || ||||| ||||||||||||||| |||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
8859076 |
gagacctagaaagcccaagagtcccaaagcattttctggcaccaaatcaaaacaaaaaaccgctacagatct--------tgatactgtgaatacaagat |
8859167 |
T |
|
| Q |
145 |
ccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgatt |
244 |
Q |
| |
|
||||||||| |||||||||||||||||| | |||| |||||||||||||||||||||| | |||| || ||| |||||||| ||||||||||||| ||| |
|
|
| T |
8859168 |
ccaaacatggtgttatcaaaagcaatcctagatattgtgattagaggattaggaaattttgatacttatttattttgcataacagatgctatatcttatt |
8859267 |
T |
|
| Q |
245 |
agatttctttaggggcatgtgcagccctatgcttt-atggcaggctacactttgttttgttgctat |
309 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| |
|
|
| T |
8859268 |
agatttcattaggggcatgtgcagccctatgctttcttggtaggctacactttgttttgtttctat |
8859333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5764614 - 5764446
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5764614 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5764515 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5764514 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5764446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5768149 - 5767981
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5768149 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5768050 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5768049 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5767981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5771684 - 5771516
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5771684 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5771585 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5771584 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5771516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5775219 - 5775051
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5775219 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5775120 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5775119 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5775051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5778754 - 5778586
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5778754 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5778655 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5778654 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5778586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5782289 - 5782121
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5782289 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5782190 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5782189 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5782121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5785824 - 5785656
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5785824 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5785725 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5785724 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5785656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5789359 - 5789191
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5789359 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5789260 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5789259 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5789191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5792894 - 5792726
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5792894 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5792795 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5792794 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5792726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5796429 - 5796261
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5796429 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5796330 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5796329 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5796261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5799964 - 5799796
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5799964 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5799865 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5799864 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5799796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5803499 - 5803331
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5803499 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5803400 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5803399 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5803331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5807034 - 5806866
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5807034 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5806935 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5806934 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5806866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5810569 - 5810401
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5810569 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5810470 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5810469 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5810401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5814104 - 5813936
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5814104 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5814005 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5814004 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5813936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 309
Target Start/End: Complemental strand, 5817639 - 5817471
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| |||||| |||| ||||| ||||||| | |||||||||||||||| || | |||| || ||| |||||||| | |||||| |||||| |
|
|
| T |
5817639 |
tccaaaaatggtgttataaaaaacaatctcaaatattgtaattagaggattaggaaggtttgatacttatgtattttgcataacatctgctatgtctgat |
5817540 |
T |
|
| Q |
244 |
tagatttctttaggggcatgtgcagccctatg--ctttatggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||| |||||||||| || || |||||| || ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5817539 |
tagaattctttagggatatatgtagccctgtgttttttatggcaggctactctttgtttttgttgctat |
5817471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 22 - 305
Target Start/End: Original strand, 37370269 - 37370560
Alignment:
| Q |
22 |
actgttaaaaagggcaagtgagagagacctagaaagcccaagagtctcaaatcactttctaacaccaaatcaaaacacaaaacctctacagatc------ |
115 |
Q |
| |
|
|||| ||||||||||||| ||| ||||||||||||| ||||||| | || | || | ||| ||||||||| ||||||||||||||||||| ||| |
|
|
| T |
37370269 |
actgctaaaaagggcaagagagggagacctagaaaggccaagaggcccataacagtatctgacaccaaataaaaacacaaaacctctacaaatcttattg |
37370368 |
T |
|
| Q |
116 |
-gactggctctgatactgtgaatacaagatccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatc |
214 |
Q |
| |
|
||||| |||||||| | |||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| | || ||||| |
|
|
| T |
37370369 |
agactgactctgataatatgaatacaagattcaaacatggtgttatcaaaaacaatcccaaatatgatgattagaggattaggaaattttgatattcatc |
37370468 |
T |
|
| Q |
215 |
tatgttgcataatagatgctatatctgattagatttctttaggggcatgtgcagccctatgcttta-tggcaggctacactttgttttgttg |
305 |
Q |
| |
|
| | |||| | | ||||||||||||||||||||||||| ||||| ||| || |||| ||| ||||| ||||||||||||||| ||||||||| |
|
|
| T |
37370469 |
ttttttgctttacagatgctatatctgattagatttctgtagggacatttgaagccatattctttattggcaggctacacttagttttgttg |
37370560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 149 - 309
Target Start/End: Original strand, 34483856 - 34484017
Alignment:
| Q |
149 |
acatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgattagat |
248 |
Q |
| |
|
||||| |||||||||||||||||| | ||||| ||||||||||| || ||||||| | ||||||||||| || ||||||||||||| ||||||||||||| |
|
|
| T |
34483856 |
acatggtgttatcaaaagcaatcctagatatggtgattagaggaatatgaaattttgatactcatctattttacataatagatgctttatctgattagat |
34483955 |
T |
|
| Q |
249 |
ttctttaggggcatgtgcagccctatgctt-tatggcaggctacactttgttttgttgctat |
309 |
Q |
| |
|
|| ||| | | ||||||||||| ||||||| ||||| | ||||||||||||||||||||| |
|
|
| T |
34483956 |
tttttttgagacatgtgcagccttatgcttccttggcatgttacactttgttttgttgctat |
34484017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 155 - 309
Target Start/End: Complemental strand, 49094573 - 49094415
Alignment:
| Q |
155 |
tgttatcaaaagcaatcccaaatatga-tgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgattagatttctt |
253 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||| || | ||||||| ||| ||||||||||| |||||| || || |||| ||||| |
|
|
| T |
49094573 |
tgttatcaaaagcaatcccaaatatttgtgattagaggattaggaaggtttggtactcatatattttgcataatagttgctatgtcagagtagaattctt |
49094474 |
T |
|
| Q |
254 |
taggggcatgtgcagccctatgcttt--atggcaggctacactttg-ttttgttgctat |
309 |
Q |
| |
|
|||||| | |||||||| | |||||| ||| |||| ||| ||||| |||||||||||| |
|
|
| T |
49094473 |
taggggtacgtgcagccatttgcttttcatgccaggatactctttgtttttgttgctat |
49094415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 38836170 - 38836273
Alignment:
| Q |
144 |
tccaaacatgatgttatcaaaagcaatcccaaatatgatgattagaggattaggaaatttcgttactcatctatgttgcataatagatgctatatctgat |
243 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||| |||||||||||||||||| || | ||||||| ||| |||||||| | ||| ||| |||||| |
|
|
| T |
38836170 |
tccaaaaatggtgttatcaaaagcaatcccaaatattgtgattagaggattaggaagatttgatactcatgtattttgcataacatatgatatgtctgat |
38836269 |
T |
|
| Q |
244 |
taga |
247 |
Q |
| |
|
|||| |
|
|
| T |
38836270 |
taga |
38836273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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