View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10461_low_20 (Length: 268)

Name: NF10461_low_20
Description: NF10461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10461_low_20
NF10461_low_20
[»] scaffold0004 (2 HSPs)
scaffold0004 (4-268)||(109413-109677)
scaffold0004 (14-179)||(59601-59771)
[»] scaffold0056 (1 HSPs)
scaffold0056 (14-267)||(66269-66522)
[»] chr2 (23 HSPs)
chr2 (10-268)||(27851832-27852090)
chr2 (10-268)||(27860538-27860796)
chr2 (14-264)||(44071749-44071999)
chr2 (8-268)||(18390869-18391130)
chr2 (19-244)||(25141349-25141574)
chr2 (19-268)||(22259235-22259484)
chr2 (19-268)||(3539002-3539252)
chr2 (67-268)||(5985396-5985595)
chr2 (94-245)||(10897102-10897253)
chr2 (134-268)||(25045384-25045516)
chr2 (19-149)||(25141159-25141289)
chr2 (17-268)||(14693472-14693723)
chr2 (73-180)||(6477919-6478026)
chr2 (141-206)||(23004968-23005033)
chr2 (148-227)||(18546762-18546840)
chr2 (14-179)||(19358194-19358357)
chr2 (141-227)||(23287581-23287666)
chr2 (155-268)||(21242914-21243026)
chr2 (142-215)||(34137159-34137232)
chr2 (34-90)||(9784906-9784962)
chr2 (147-206)||(20520030-20520089)
chr2 (148-206)||(26392606-26392664)
chr2 (141-205)||(43947210-43947274)
[»] chr5 (26 HSPs)
chr5 (4-268)||(20469665-20469930)
chr5 (22-268)||(21618581-21618826)
chr5 (92-265)||(25250442-25250614)
chr5 (92-265)||(25314227-25314399)
chr5 (19-268)||(29914537-29914786)
chr5 (19-180)||(22357585-22357747)
chr5 (14-180)||(8952679-8952844)
chr5 (19-149)||(20565673-20565803)
chr5 (143-263)||(10953362-10953481)
chr5 (141-268)||(25576632-25576758)
chr5 (142-215)||(23470021-23470094)
chr5 (19-90)||(20565863-20565934)
chr5 (148-206)||(20572112-20572170)
chr5 (14-185)||(24277230-24277400)
chr5 (14-185)||(24384813-24384983)
chr5 (141-206)||(25574307-25574372)
chr5 (141-206)||(25575500-25575565)
chr5 (158-205)||(5889016-5889063)
chr5 (14-111)||(32608055-32608151)
chr5 (144-180)||(18318942-18318978)
chr5 (142-206)||(21731298-21731362)
chr5 (142-206)||(21809418-21809482)
chr5 (54-172)||(21406320-21406438)
chr5 (153-206)||(21328052-21328105)
chr5 (141-206)||(26740484-26740549)
chr5 (144-180)||(20765993-20766029)
[»] chr1 (30 HSPs)
chr1 (10-264)||(13302041-13302295)
chr1 (14-179)||(51476234-51476400)
chr1 (67-264)||(42697031-42697227)
chr1 (14-180)||(52983403-52983570)
chr1 (134-265)||(45754838-45754968)
chr1 (14-179)||(18275173-18275343)
chr1 (14-180)||(18823864-18824031)
chr1 (14-180)||(13528417-13528588)
chr1 (14-179)||(18270519-18270689)
chr1 (16-104)||(21239953-21240042)
chr1 (155-268)||(22124517-22124630)
chr1 (19-99)||(51323584-51323664)
chr1 (181-268)||(24726742-24726829)
chr1 (143-209)||(19761824-19761889)
chr1 (141-206)||(52940715-52940780)
chr1 (147-206)||(26065163-26065222)
chr1 (148-206)||(20346029-20346087)
chr1 (148-206)||(27653060-27653118)
chr1 (142-215)||(21043110-21043183)
chr1 (14-90)||(14238324-14238399)
chr1 (141-205)||(47190819-47190883)
chr1 (158-205)||(28194289-28194336)
chr1 (14-90)||(20587941-20588018)
chr1 (14-90)||(20592479-20592556)
chr1 (155-268)||(20958340-20958452)
chr1 (153-206)||(35260918-35260971)
chr1 (14-111)||(38887818-38887914)
chr1 (49-90)||(51082515-51082556)
chr1 (14-90)||(7052767-7052842)
chr1 (14-77)||(44822851-44822915)
[»] chr7 (46 HSPs)
chr7 (4-268)||(4070973-4071237)
chr7 (19-268)||(15096225-15096474)
chr7 (14-268)||(15281520-15281773)
chr7 (19-268)||(14219553-14219802)
chr7 (18-243)||(15139384-15139610)
chr7 (14-264)||(19557869-19558119)
chr7 (19-268)||(13132907-13133156)
chr7 (22-248)||(48809090-48809315)
chr7 (21-244)||(16077586-16077809)
chr7 (14-179)||(11053888-11054054)
chr7 (19-149)||(13133216-13133346)
chr7 (19-209)||(8135720-8135910)
chr7 (14-179)||(3289446-3289616)
chr7 (22-268)||(22000804-22001049)
chr7 (142-268)||(42462168-42462294)
chr7 (143-268)||(36705208-36705332)
chr7 (14-180)||(21735127-21735296)
chr7 (19-99)||(1489934-1490014)
chr7 (141-206)||(9177503-9177568)
chr7 (141-206)||(16091975-16092040)
chr7 (147-206)||(14036422-14036481)
chr7 (147-206)||(14044972-14045031)
chr7 (147-206)||(14346452-14346511)
chr7 (147-206)||(14355002-14355061)
chr7 (148-206)||(17017305-17017363)
chr7 (141-206)||(9725497-9725562)
chr7 (142-206)||(9033183-9033247)
chr7 (154-215)||(130644-130705)
chr7 (14-185)||(8757020-8757190)
chr7 (134-179)||(13255914-13255959)
chr7 (134-179)||(13256009-13256054)
chr7 (14-109)||(43277518-43277614)
chr7 (34-90)||(14258676-14258732)
chr7 (34-90)||(16460604-16460660)
chr7 (34-90)||(16579984-16580040)
chr7 (34-90)||(16585623-16585679)
chr7 (34-90)||(32301506-32301562)
chr7 (141-224)||(16996439-16996522)
chr7 (14-99)||(40555451-40555537)
chr7 (14-109)||(3287179-3287275)
chr7 (148-209)||(10659564-10659624)
chr7 (49-90)||(14929044-14929085)
chr7 (49-90)||(15352510-15352551)
chr7 (142-206)||(11768756-11768820)
chr7 (34-90)||(20487767-20487823)
chr7 (144-180)||(48273600-48273636)
[»] chr8 (40 HSPs)
chr8 (19-268)||(31723149-31723398)
chr8 (19-268)||(22318495-22318744)
chr8 (67-268)||(36727694-36727895)
chr8 (14-268)||(17907508-17907763)
chr8 (49-265)||(17217881-17218097)
chr8 (14-268)||(23947458-23947711)
chr8 (14-179)||(23888982-23889148)
chr8 (22-268)||(45470998-45471244)
chr8 (14-241)||(22244661-22244888)
chr8 (22-215)||(20024876-20025068)
chr8 (19-125)||(36728008-36728114)
chr8 (141-268)||(9546-9672)
chr8 (14-179)||(22584362-22584529)
chr8 (19-149)||(31723458-31723588)
chr8 (180-268)||(23900643-23900731)
chr8 (134-268)||(19699446-19699579)
chr8 (19-99)||(5760842-5760922)
chr8 (141-268)||(22381510-22381637)
chr8 (153-268)||(22525746-22525860)
chr8 (142-268)||(22252941-22253067)
chr8 (134-268)||(25848986-25849118)
chr8 (142-268)||(20501877-20502003)
chr8 (142-206)||(22963257-22963321)
chr8 (142-268)||(17085930-17086055)
chr8 (148-206)||(20533246-20533304)
chr8 (141-206)||(23668027-23668092)
chr8 (141-206)||(37515923-37515988)
chr8 (148-206)||(14103062-14103120)
chr8 (148-206)||(17439343-17439401)
chr8 (141-206)||(40492690-40492755)
chr8 (34-90)||(21346071-21346127)
chr8 (181-268)||(23418753-23418840)
chr8 (158-205)||(39834065-39834112)
chr8 (146-180)||(23450847-23450881)
chr8 (146-180)||(34301925-34301959)
chr8 (49-90)||(6102464-6102505)
chr8 (153-206)||(19154723-19154776)
chr8 (14-109)||(22259064-22259158)
chr8 (34-90)||(23914248-23914304)
chr8 (144-180)||(26222945-26222981)
[»] scaffold0251 (1 HSPs)
scaffold0251 (22-268)||(20564-20810)
[»] scaffold0002 (2 HSPs)
scaffold0002 (4-237)||(127365-127599)
scaffold0002 (111-268)||(397852-398008)
[»] chr3 (53 HSPs)
chr3 (4-237)||(13179389-13179623)
chr3 (5-268)||(16059480-16059742)
chr3 (5-268)||(16044620-16044882)
chr3 (19-244)||(11562882-11563107)
chr3 (5-268)||(16050097-16050357)
chr3 (14-179)||(20417336-20417502)
chr3 (22-247)||(17258786-17259011)
chr3 (14-180)||(14818282-14818449)
chr3 (19-132)||(11192200-11192313)
chr3 (19-149)||(11562688-11562818)
chr3 (134-268)||(11886211-11886344)
chr3 (19-120)||(6155897-6155998)
chr3 (49-180)||(52338592-52338723)
chr3 (14-180)||(10550526-10550693)
chr3 (14-180)||(17548174-17548345)
chr3 (149-265)||(12512361-12512476)
chr3 (19-99)||(17046471-17046551)
chr3 (19-99)||(54876146-54876226)
chr3 (19-99)||(11192390-11192470)
chr3 (19-99)||(14441477-14441557)
chr3 (19-99)||(17691468-17691548)
chr3 (22-90)||(19569041-19569109)
chr3 (181-268)||(14250663-14250750)
chr3 (14-180)||(52213105-52213271)
chr3 (57-179)||(11850279-11850405)
chr3 (19-90)||(6156015-6156086)
chr3 (14-179)||(45531247-45531410)
chr3 (21-99)||(9511828-9511906)
chr3 (21-99)||(9519803-9519881)
chr3 (19-99)||(17685506-17685586)
chr3 (14-116)||(23395751-23395854)
chr3 (142-205)||(32402799-32402862)
chr3 (155-209)||(15447599-15447654)
chr3 (141-215)||(37427932-37428006)
chr3 (14-185)||(3394626-3394796)
chr3 (14-185)||(13523035-13523205)
chr3 (14-109)||(14153163-14153259)
chr3 (12-99)||(6819365-6819453)
chr3 (34-90)||(12470126-12470182)
chr3 (34-90)||(14671148-14671204)
chr3 (34-90)||(14682647-14682703)
chr3 (144-180)||(21618656-21618692)
chr3 (144-180)||(36166805-36166841)
chr3 (14-90)||(42353385-42353460)
chr3 (143-206)||(316339-316402)
chr3 (148-187)||(13919554-13919593)
chr3 (146-180)||(12158658-12158692)
chr3 (14-99)||(18367466-18367552)
chr3 (14-102)||(35065280-35065369)
chr3 (14-90)||(41173083-41173160)
chr3 (148-205)||(15246244-15246301)
chr3 (49-90)||(18700145-18700186)
chr3 (49-90)||(43889471-43889512)
[»] scaffold0008 (1 HSPs)
scaffold0008 (14-268)||(136157-136411)
[»] scaffold0445 (1 HSPs)
scaffold0445 (5-264)||(2475-2736)
[»] chr6 (37 HSPs)
chr6 (14-268)||(31735463-31735717)
chr6 (19-268)||(23500890-23501139)
chr6 (19-268)||(6083327-6083575)
chr6 (14-180)||(13750981-13751148)
chr6 (14-175)||(22212139-22212302)
chr6 (144-268)||(22376453-22376577)
chr6 (54-180)||(24267064-24267190)
chr6 (19-149)||(23491974-23492104)
chr6 (19-149)||(23497572-23497702)
chr6 (141-268)||(20077950-20078077)
chr6 (149-268)||(24550821-24550939)
chr6 (143-264)||(16245567-16245687)
chr6 (19-99)||(19655892-19655972)
chr6 (57-179)||(5110399-5110525)
chr6 (142-215)||(18453401-18453474)
chr6 (19-90)||(23491843-23491914)
chr6 (19-90)||(23497441-23497512)
chr6 (148-206)||(18696712-18696770)
chr6 (148-206)||(20224168-20224226)
chr6 (148-206)||(22118152-22118210)
chr6 (19-104)||(28947654-28947738)
chr6 (141-268)||(15896154-15896280)
chr6 (57-176)||(5289761-5289884)
chr6 (141-267)||(20136887-20137013)
chr6 (141-267)||(22195856-22195982)
chr6 (148-206)||(33443270-33443328)
chr6 (34-90)||(15705283-15705339)
chr6 (144-180)||(16448435-16448471)
chr6 (142-206)||(16493366-16493430)
chr6 (14-77)||(18658464-18658528)
chr6 (14-101)||(19443988-19444076)
chr6 (34-90)||(19773381-19773437)
chr6 (155-215)||(25738611-25738671)
chr6 (142-268)||(17229692-17229817)
chr6 (14-77)||(610998-611062)
chr6 (14-101)||(16133378-16133466)
chr6 (14-77)||(29848235-29848299)
[»] scaffold0028 (1 HSPs)
scaffold0028 (19-268)||(3628-3877)
[»] chr4 (40 HSPs)
chr4 (14-268)||(21061784-21062038)
chr4 (14-180)||(4615693-4615860)
chr4 (19-149)||(14629945-14630075)
chr4 (14-180)||(14933068-14933235)
chr4 (16-131)||(16026765-16026880)
chr4 (14-176)||(27027993-27028156)
chr4 (19-124)||(9638080-9638185)
chr4 (143-268)||(15612366-15612490)
chr4 (14-179)||(2584835-2585005)
chr4 (14-179)||(6511832-6512002)
chr4 (14-180)||(14942273-14942441)
chr4 (134-266)||(51992902-51993032)
chr4 (14-180)||(20899387-20899554)
chr4 (19-99)||(53631136-53631216)
chr4 (14-180)||(13446710-13446876)
chr4 (143-268)||(50160383-50160507)
chr4 (92-180)||(18229996-18230084)
chr4 (19-90)||(16026628-16026699)
chr4 (141-268)||(26050251-26050378)
chr4 (19-99)||(14630135-14630215)
chr4 (181-268)||(32466848-32466935)
chr4 (148-206)||(17333505-17333563)
chr4 (142-268)||(32306771-32306897)
chr4 (141-206)||(13591764-13591829)
chr4 (19-99)||(13036440-13036520)
chr4 (141-268)||(27996130-27996256)
chr4 (149-268)||(40907297-40907416)
chr4 (141-198)||(26789556-26789613)
chr4 (14-90)||(3485176-3485251)
chr4 (141-268)||(19738465-19738591)
chr4 (144-180)||(54798627-54798663)
chr4 (155-206)||(14825700-14825751)
chr4 (14-99)||(15448119-15448205)
chr4 (14-90)||(25090916-25090993)
chr4 (144-177)||(14280524-14280557)
chr4 (141-198)||(15791992-15792049)
chr4 (14-109)||(37018861-37018957)
chr4 (144-180)||(8574742-8574778)
chr4 (142-206)||(14852713-14852777)
chr4 (54-90)||(19734590-19734626)
[»] scaffold1695 (1 HSPs)
scaffold1695 (19-268)||(625-874)
[»] scaffold0010 (2 HSPs)
scaffold0010 (63-268)||(126958-127162)
scaffold0010 (153-202)||(60556-60605)
[»] scaffold0628 (2 HSPs)
scaffold0628 (75-268)||(4069-4260)
scaffold0628 (75-268)||(8629-8820)
[»] scaffold0181 (1 HSPs)
scaffold0181 (14-180)||(34018-34185)
[»] scaffold0409 (2 HSPs)
scaffold0409 (49-268)||(521-739)
scaffold0409 (49-268)||(8776-8994)
[»] scaffold0413 (1 HSPs)
scaffold0413 (14-178)||(10934-11099)
[»] scaffold0859 (1 HSPs)
scaffold0859 (19-268)||(3944-4193)
[»] scaffold0042 (1 HSPs)
scaffold0042 (14-265)||(28537-28785)
[»] scaffold0520 (1 HSPs)
scaffold0520 (19-184)||(83-248)
[»] scaffold0151 (1 HSPs)
scaffold0151 (147-268)||(30409-30530)
[»] scaffold2046 (1 HSPs)
scaffold2046 (14-180)||(368-535)
[»] scaffold0273 (1 HSPs)
scaffold0273 (14-180)||(6878-7045)
[»] scaffold1186 (2 HSPs)
scaffold1186 (19-149)||(830-960)
scaffold1186 (19-99)||(1020-1100)
[»] scaffold0005 (3 HSPs)
scaffold0005 (19-149)||(187308-187438)
scaffold0005 (19-99)||(187168-187248)
scaffold0005 (155-206)||(13958-14009)
[»] scaffold0453 (1 HSPs)
scaffold0453 (16-180)||(3295-3460)
[»] scaffold0371 (1 HSPs)
scaffold0371 (14-130)||(16862-16978)
[»] scaffold0338 (1 HSPs)
scaffold0338 (92-264)||(11369-11541)
[»] scaffold0003 (1 HSPs)
scaffold0003 (144-268)||(95674-95798)
[»] scaffold0309 (2 HSPs)
scaffold0309 (14-180)||(6164-6331)
scaffold0309 (14-180)||(8316-8483)
[»] scaffold0529 (2 HSPs)
scaffold0529 (19-149)||(7606-7736)
scaffold0529 (22-90)||(7800-7868)
[»] scaffold0117 (1 HSPs)
scaffold0117 (14-180)||(40852-41019)
[»] scaffold0331 (2 HSPs)
scaffold0331 (141-267)||(12676-12802)
scaffold0331 (119-180)||(4064-4125)
[»] scaffold0321 (1 HSPs)
scaffold0321 (134-268)||(542-675)
[»] scaffold0293 (1 HSPs)
scaffold0293 (142-268)||(17721-17847)
[»] scaffold0241 (4 HSPs)
scaffold0241 (19-125)||(1654-1760)
scaffold0241 (19-150)||(4807-4938)
scaffold0241 (22-90)||(5000-5068)
scaffold0241 (22-90)||(1847-1915)
[»] scaffold0123 (2 HSPs)
scaffold0123 (14-180)||(1903-2072)
scaffold0123 (148-206)||(762-820)
[»] scaffold0429 (1 HSPs)
scaffold0429 (16-180)||(2617-2782)
[»] scaffold0285 (1 HSPs)
scaffold0285 (49-262)||(19006-19219)
[»] scaffold0490 (1 HSPs)
scaffold0490 (14-177)||(5082-5246)
[»] scaffold0077 (3 HSPs)
scaffold0077 (146-268)||(3105-3225)
scaffold0077 (142-206)||(55522-55586)
scaffold0077 (14-90)||(33615-33690)
[»] scaffold1283 (1 HSPs)
scaffold1283 (19-99)||(1130-1210)
[»] scaffold0061 (2 HSPs)
scaffold0061 (19-99)||(15249-15329)
scaffold0061 (19-99)||(24307-24387)
[»] scaffold0107 (2 HSPs)
scaffold0107 (14-180)||(3136-3303)
scaffold0107 (148-206)||(9922-9980)
[»] scaffold0716 (1 HSPs)
scaffold0716 (92-268)||(1216-1391)
[»] scaffold0439 (1 HSPs)
scaffold0439 (19-99)||(3728-3808)
[»] scaffold0188 (1 HSPs)
scaffold0188 (14-180)||(264-431)
[»] scaffold0074 (1 HSPs)
scaffold0074 (141-268)||(8398-8525)
[»] scaffold0589 (1 HSPs)
scaffold0589 (134-265)||(3649-3781)
[»] scaffold0282 (1 HSPs)
scaffold0282 (142-268)||(17943-18069)
[»] scaffold0108 (1 HSPs)
scaffold0108 (142-268)||(3395-3521)
[»] scaffold0113 (1 HSPs)
scaffold0113 (19-100)||(34538-34619)
[»] scaffold0098 (1 HSPs)
scaffold0098 (19-99)||(39408-39488)
[»] scaffold0040 (2 HSPs)
scaffold0040 (140-268)||(22462-22590)
scaffold0040 (140-215)||(11362-11437)
[»] scaffold0026 (1 HSPs)
scaffold0026 (14-102)||(145998-146085)
[»] scaffold0017 (1 HSPs)
scaffold0017 (19-99)||(25825-25905)
[»] scaffold0379 (2 HSPs)
scaffold0379 (146-268)||(4394-4516)
scaffold0379 (142-215)||(14441-14514)
[»] scaffold0076 (1 HSPs)
scaffold0076 (148-206)||(24435-24493)
[»] scaffold2080 (1 HSPs)
scaffold2080 (141-206)||(598-663)
[»] scaffold0326 (1 HSPs)
scaffold0326 (57-179)||(8-134)
[»] scaffold0169 (1 HSPs)
scaffold0169 (142-206)||(29261-29325)
[»] scaffold0106 (1 HSPs)
scaffold0106 (142-206)||(19484-19548)
[»] scaffold0021 (1 HSPs)
scaffold0021 (19-99)||(168746-168826)
[»] scaffold0071 (1 HSPs)
scaffold0071 (155-209)||(14538-14593)
[»] scaffold0065 (1 HSPs)
scaffold0065 (133-268)||(53176-53309)
[»] scaffold0780 (1 HSPs)
scaffold0780 (148-206)||(3165-3223)
[»] scaffold0708 (1 HSPs)
scaffold0708 (148-206)||(2265-2322)
[»] scaffold0485 (1 HSPs)
scaffold0485 (141-215)||(10369-10443)
[»] scaffold0356 (1 HSPs)
scaffold0356 (148-206)||(499-557)
[»] scaffold0260 (1 HSPs)
scaffold0260 (148-206)||(8352-8410)
[»] scaffold0220 (1 HSPs)
scaffold0220 (134-204)||(17791-17860)
[»] scaffold0081 (1 HSPs)
scaffold0081 (148-202)||(4538-4592)
[»] scaffold0009 (1 HSPs)
scaffold0009 (148-206)||(85770-85828)
[»] scaffold0750 (1 HSPs)
scaffold0750 (141-206)||(3813-3878)
[»] scaffold0575 (1 HSPs)
scaffold0575 (34-90)||(5998-6054)
[»] scaffold0292 (1 HSPs)
scaffold0292 (34-90)||(6837-6893)
[»] scaffold0146 (1 HSPs)
scaffold0146 (14-90)||(22323-22398)
[»] scaffold0054 (1 HSPs)
scaffold0054 (141-221)||(75651-75731)
[»] scaffold0022 (1 HSPs)
scaffold0022 (144-180)||(116637-116673)
[»] scaffold0018 (1 HSPs)
scaffold0018 (34-90)||(20976-21032)
[»] scaffold0047 (2 HSPs)
scaffold0047 (155-206)||(22510-22561)
scaffold0047 (14-90)||(78327-78402)
[»] scaffold0039 (1 HSPs)
scaffold0039 (39-90)||(10641-10692)
[»] scaffold0357 (1 HSPs)
scaffold0357 (148-202)||(2919-2973)
[»] scaffold1633 (1 HSPs)
scaffold1633 (49-90)||(507-548)
[»] scaffold0232 (1 HSPs)
scaffold0232 (49-90)||(3609-3650)
[»] scaffold0207 (1 HSPs)
scaffold0207 (49-90)||(15221-15262)
[»] scaffold0205 (1 HSPs)
scaffold0205 (49-90)||(29909-29950)
[»] scaffold0019 (1 HSPs)
scaffold0019 (49-90)||(29457-29498)
[»] scaffold0012 (1 HSPs)
scaffold0012 (142-215)||(221036-221109)
[»] scaffold0607 (1 HSPs)
scaffold0607 (14-77)||(2964-3028)
[»] scaffold0096 (1 HSPs)
scaffold0096 (34-90)||(21392-21448)
[»] scaffold0070 (1 HSPs)
scaffold0070 (14-77)||(8315-8379)


Alignment Details
Target: scaffold0004 (Bit Score: 197; Significance: 1e-107; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 4 - 268
Target Start/End: Original strand, 109413 - 109677
Alignment:
Q  4 acaacaactgataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaat 103  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  109413 acaacaactgataataacaacttgaatgatatgaacattaatatctctacatcatacaatttccacataatatatgtatctcaaattaaccaacaacatt 109512  T
Q  104 aatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcg 203  Q
    |||||| ||||||||||||| | | |||  ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||||    
T  109513 aatcattttaattcagactctctgtaaggctatacctttataaacaacttccatttctaccccaaaggccaactcataacatcacgtgtgacaaagatcg 109612  T
Q  204 caagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  109613 caagaaccctaagtaaggctgactgccactgagtaactcgcgaggcgagccactctactcgctat 109677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 59601 - 59771
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||| ||||||||| || | |||||| | ||| |||||||| ||||||||||||||||||| ||  |||| ||||||||||  ||| |||||    
T  59601 ataataacaactcgaatgatataaaaaacaatattttctatatcatacattttccacataatatatgtagcttgaattaaccaacaacatcaattatatt 59700  T
Q  113 aattc----agactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactca 179  Q
    ||||     ||| |||| |||||  |||||||||||||||||||||||||||||||||||  |||||||||    
T  59701 aattagcttagattcacggaaaggctatacctttataaacaacttccattcctaccccaagaaccaactca 59771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 66269 - 66522
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatta 113  Q
    ||||||||||||| ||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  66269 ataataacaactttaatgatatgaacaacaatatttctatatcatacaatttccacatcatatatgtatctcaaattaaccaacaacaataatcatatta 66368  T
Q  114 attcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacact 213  Q
    |||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  66369 attcagactcactgaaagattatacttttataaacaactttcattcctaccccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaacact 66468  T
Q  214 aagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgcta 267  Q
    |||||||||||||| ||||||||||||||| |||| ||| ||||||||||||||    
T  66469 aagtaaggctgactgccactgagtaactcgtgaggcgagtcactctactcgcta 66522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 179; Significance: 1e-96; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 10 - 268
Target Start/End: Original strand, 27851832 - 27852090
Alignment:
Q  10 actgataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcat 109  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||||||| |||||| |    
T  27851832 actgataataacaacttgaatgatatgaacaacaatatttctatatcatacaatttccacataatatatgtatttcaaattaaccaacaactataatctt 27851931  T
Q  110 attaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaa 209  Q
    |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27851932 attaattcagactcactgaaagactatacatttataaagaacttccattcctaccccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaa 27852031  T
Q  210 cactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||||||||||||||||| | | |||||||||||| ||| |||  ||||||||||||||    
T  27852032 cactaagtaaggctgactgcgattgagtaactcgctaggcgagctactctactcgctat 27852090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 10 - 268
Target Start/End: Original strand, 27860538 - 27860796
Alignment:
Q  10 actgataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcat 109  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||| |||||||| || |||||||||| |||||||    
T  27860538 actgataataacaacttgaatgatatgaacaacaatatttctatatcatacaatttccacataatatatctatctcaatttaaccaacaacattaatcat 27860637  T
Q  110 attaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaa 209  Q
    ||||||||||||||||  ||||| ||||| |||| |||||||||||||||||||||||| |||||||||| ||||| | |||||| ||||||||||||||    
T  27860638 attaattcagactcacttaaagactatacatttaaaaacaacttccattcctaccccaatgaccaactcagaacattacgtgcgataaagatcgcaagaa 27860737  T
Q  210 cactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||||||||||||||||||| |||||||||||||||||| | | |||||||||||||||    
T  27860738 cactaagtaaggctgactactactgagtaactcgcgaggcgtgccactctactcgctat 27860796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 14 - 264
Target Start/End: Original strand, 44071749 - 44071999
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatta 113  Q
    |||||||||||||||| |||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  44071749 ataataacaacttgaacgatatgaacaacaatatttctatatcatacaatttccacataatatatgtatctcaaattatccaacaacaataatcatgtta 44071848  T
Q  114 attcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacact 213  Q
    |||||||||||| ||||||  ||||  ||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  44071849 attcagactcactgaaagacaatacaattataaacaacttacattcctaccccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaacact 44071948  T
Q  214 aagtaaggctgactaccactgagtaactcgcgaggagagacactctactcg 264  Q
    |||||||||||||| ||||||||||||| |||||| ||| |||||| ||||    
T  44071949 aagtaaggctgactgccactgagtaacttgcgaggcgagccactctgctcg 44071999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 8 - 268
Target Start/End: Complemental strand, 18391130 - 18390869
Alignment:
Q  8 caactgataataacaacttgaatgatatgaacatcaatatctct-acatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataat 106  Q
    ||||||||||||||||||||||||||||||||| |||||| ||  | |||||| | ||||||||||||||||||| |||||||| |||||||| ||||||    
T  18391130 caactgataataacaacttgaatgatatgaacaacaatatttccgatatcatatattttccacataatatatgtagctcaaattaaccaacaaaaataat 18391031  T
Q  107 catattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||||||||| |||||||| |||||  |||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  18391030 catattaatttagactcactgaaaggctatacctttataaacaactttcattcctaccccaaggaccaactcataacatcacgtgcgacaaagatcgcaa 18390931  T
Q  207 gaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
     |||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||    
T  18390930 caacactaagtaaggctaactgccactgagtaactcgcgaggcgagccactctactcgctat 18390869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 19 - 244
Target Start/End: Original strand, 25141349 - 25141574
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| |||||| |||| |||||| ||| | ||||||||||||||||||||||||   ||||||||||||| |||||||||||    
T  25141349 aacaacttgaatgatatgaacaacaatatttctatatcataaaatattcacataatatatgtatctcaaattattcaacaacaataattatattaattca 25141448  T
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagta 218  Q
    ||||||  ||||||  ||||  ||||||||||||| |||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| ||    
T  25141449 gactcagtgaaagacaatacaattataaacaactttcatttctaccccaaagaccaactcagaacgtcacgtgcgacaaagatcgcaagaacactaatta 25141548  T
Q  219 aggctgactaccactgagtaactcgc 244  Q
    ||||||||| |||||||  |||||||    
T  25141549 aggctgactgccactgatcaactcgc 25141574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 22259235 - 22259484
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||| ||||||||| |||||| |||| |||||||||| | ||||||||||||| ||||||||||  | | |||||||| |||||||||||||    
T  22259235 aacaacttgaataatatgaacaacaatatttctatatcatacaatattcacataatatatgcatctcaaattatctagcaacaatattcatattaattca 22259334  T
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagta 218  Q
    ||||||| ||||||  ||||  ||||||||||||| ||||||||||||||||||||||| | |||  || |||||| ||||||||||||||| |||| ||    
T  22259335 gactcactgaaagacaatacaattataaacaactttcattcctaccccaaagaccaacttagaacgccacgtgcgaaaaagatcgcaagaacgctaaata 22259434  T
Q  219 aggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||||||||| ||||| |||||||||| ||| |||  ||||||||||||||    
T  22259435 aggctgactgccactaagtaactcgcaaggcgagctactctactcgctat 22259484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 3539002 - 3539252
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||  |||||||||| | |||||||||||||    
T  3539002 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaacaacattcatattaattca 3539101  T
Q  119 gac-tcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagt 217  Q
    ||| |||| |||  |  |||   ||||||||||||| ||||||||||||||||||||||||| ||  | | |||||||| ||||||||||||| ||||      
T  3539102 gacttcactgaacaacaatataattataaacaactttcattcctaccccaaagaccaactcagaatgttacgtgcgacagagatcgcaagaaccctaaac 3539201  T
Q  218 aaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||| ||||| |||||||||||||||| ||| ||| |||||||||||||||    
T  3539202 aaggttgactgccactgagtaactcgcaaggcgagccactctactcgctat 3539252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 67 - 268
Target Start/End: Original strand, 5985396 - 5985595
Alignment:
Q  67 cacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctacccc 166  Q
    ||||||||||||| || ||| ||| |||||||||| ||||||| |||| | ||  || | |||||  || ||||||||||||||||||||||||||||||    
T  5985396 cacataatatatgaatttcacattaaccaacaacattaatcattttaacttaggttctctgaaaggctaaacctttataaacaacttccattcctacccc 5985495  T
Q  167 aaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgct 266  Q
    ||||||||||||||||| ||| || ||| |||||||||||| ||||| |||| |||||||| ||||||||||| |||||||| ||| |||||||||||||    
T  5985496 aaagaccaactcataacttcacgttcgaaaaagatcgcaaggacact-agtagggctgactgccactgagtaa-tcgcgaggcgagtcactctactcgct 5985593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 245
Target Start/End: Complemental strand, 10897253 - 10897102
Alignment:
Q  94 caacaacaataatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcg 193  Q
    ||||||||||| |||||||||||||||||||| ||||| | |||   ||||||||||||| | ||| ||||||||||||||||||| || |||| |||||    
T  10897253 caacaacaatattcatattaattcagactcactgaaagctaatataattataaacaactttccttcttaccccaaagaccaactcagaatatcacgtgcg 10897154  T
Q  194 acaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcg 245  Q
    ||| ||||||||||||| ||| ||||||||||||  |||| |||||||||||    
T  10897153 acacagatcgcaagaactctaggtaaggctgactgtcactaagtaactcgcg 10897102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 25045384 - 25045516
Alignment:
Q  134 tatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccact 233  Q
    |||| ||| ||||||||||| |||||||| ||||| || ||||||| ||||||| || ||||||||||||||||||| ||||  |||| ||||| |||||    
T  25045384 tataacttaataaacaacttacattcctaacccaa-gatcaactcacaacatcacgtacgacaaagatcgcaagaaccctaaacaagg-tgactgccact 25045481  T
Q  234 gagtaactcgcgaggagagacactctactcgctat 268  Q
    ||||| ||||||||| ||| |||||||||||||||    
T  25045482 gagtagctcgcgaggcgagccactctactcgctat 25045516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 25141159 - 25141289
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    ||||||||||||||||||||||  ||||| |||| |||||| ||| | ||||||||||||||||||||||||   ||||||||||| |||| |||||| |    
T  25141159 aacaacttgaatgatatgaacaataatatttctatatcatataatattcacataatatatgtatctcaaattattcaacaacaatattcatgttaattta 25141258  T
Q  119 gactcaccgaaagattatacctttataaaca 149  Q
    ||||||| ||||||  ||||  |||||||||    
T  25141259 gactcactgaaagacaatacaattataaaca 25141289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 268
Target Start/End: Original strand, 14693472 - 14693723
Alignment:
Q  17 ataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataata-tatgtatctcaaattgaccaacaacaataatcatattaa 114  Q
    ||||||||||||||||||| ||||||||||| | ||| |||||||| ||||||||||||  ||| || |||||||| |||||| ||| ||| ||  ||||    
T  14693472 ataacaacttgaatgatat-aacatcaatattttctatatcatacattttccacataattgtatatagctcaaattaaccaaccacattaa-cagcttaa 14693569  T
Q  115 ttcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacacta 214  Q
    ||||||||| | |||| |   ||   |  | |||||||| |||||||||||||| |||||||||| |||||||| |||||  | |||||||||||| |||    
T  14693570 ttcagactctctgaaacaccttataatagtcaacaactttcattcctaccccaaggaccaactcagaacatcatatgcgaagaggatcgcaagaacccta 14693669  T
Q  215 agtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |  |||| || ||  |||| ||||||| ||||||  || |||||||||||||||    
T  14693670 aacaaggttgtctgtcactaagtaactggcgaggcaagccactctactcgctat 14693723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 180
Target Start/End: Complemental strand, 6478026 - 6477919
Alignment:
Q  73 atatatgtatctcaaattgaccaacaacaataatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagac 172  Q
    |||||| || || ||||| ||||||||||  ||| |||||| || ||| |||| |||||  ||||||||||||||||||||||||||||||||||| |||    
T  6478026 atatatatagcttaaattaaccaacaacatcaattatattagtttagattcactgaaaggctatacctttataaacaacttccattcctaccccaaggac 6477927  T
Q  173 caactcat 180  Q
    ||||||||    
T  6477926 caactcat 6477919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 23004968 - 23005033
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| ||||| ||||||||||||| || || ||||||||||||||  ||||||||||||||||||    
T  23004968 ttatatacaacctccattcctacccaaaggatcaactcataacatcccgtgcgacaaagatcgcaa 23005033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 18546840 - 18546762
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgact 227  Q
    |||| |||||||||||||||| || |||||||||||||   |||||||||||||||||| ||| ||||  ||||||||||    
T  18546840 caacctccattcctaccccaaggatcaactcataacatttcgtgcgacaaagatcgcaa-aaccctaaacaaggctgact 18546762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 19358194 - 19358357
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataa-tatatgtatctcaaattgaccaacaacaataatcatat 111  Q
    |||||||||||||||||||||| |||| || ||| | ||| |||||||  ||||||||||| |||||||| |||||||| || ||||||  ||||||| |    
T  19358194 ataataacaacttgaatgatat-aacaacattattttctatatcataccttttccacataaatatatgtaactcaaattaac-aacaact-taatcat-t 19358289  T
Q  112 taattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactca 179  Q
    |||||||||||| | |||| |  |||   |||| |||||||| ||||| | |||||||||||||||||    
T  19358290 taattcagactcgctgaaacacaatataattatgaacaactttcattcatgccccaaagaccaactca 19358357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 23287581 - 23287666
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgact 227  Q
    |||||| |||| ||||||||||||| || || ||||||| ||||||  |||||||||||||||||| ||| ||||  ||||||||||    
T  23287581 ttataatcaacctccattcctaccctaaggatcaactcacaacatctcgtgcgacaaagatcgcaa-aaccctaaacaaggctgact 23287666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 21242914 - 21243026
Alignment:
Q  155 cattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagac 254  Q
    ||||||||||| || || ||||||||||||||  ||| |||||||||||||| ||| ||||  ||||||| ||  | ||| | | ||||||||| ||| |    
T  21242914 cattcctaccctaaggatcaactcataacatctcgtgagacaaagatcgcaa-aaccctaaacaaggctgtctgtctctgtgcagctcgcgaggcgagcc 21243012  T
Q  255 actctactcgctat 268  Q
    ||||||||||||||    
T  21243013 actctactcgctat 21243026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 34137159 - 34137232
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaa 215  Q
    ||||| |||| |||||||||||||||| |  || |||||||| |||  ||||||||||||||||||||| ||||    
T  34137159 tataatcaacctccattcctaccccaagggtcatctcataacctcacatgcgacaaagatcgcaagaaccctaa 34137232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 9784906 - 9784962
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  9784906 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaatt 9784962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 20520089 - 20520030
Alignment:
Q  147 acaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| |||||||||||||||| ||  |||||||||||||  |||| |||||||||||||    
T  20520089 acaacctccattcctaccccaaggataaactcataacatctcgtgcaacaaagatcgcaa 20520030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 26392606 - 26392664
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| || ||||||||||||||   | |||||||||||||||    
T  26392606 caacctccattcctaccccaaggatcaactcataacatctcctacgacaaagatcgcaa 26392664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 43947274 - 43947210
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgca 205  Q
    |||||| |||| ||||||||||||| || |  ||||||||||| ||| |||||||||| ||||||    
T  43947274 ttataatcaacctccattcctaccctaagggtcaactcataacctcacgtgcgacaaaaatcgca 43947210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 178; Significance: 4e-96; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 268
Target Start/End: Complemental strand, 20469930 - 20469665
Alignment:
Q  4 acaacaactgataataacaacttgaatgata-tgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaa 102  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||     
T  20469930 acaacaactgataaaaacaacttgaatgataatgaacatcaatatctctatatcatacaatttccacataatatatgtatctcaaattaaccaacaacat 20469831  T
Q  103 taatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatc 202  Q
    ||||||| ||||||||||||| | |||||  ||||| |||||||||||||||| ||||| |||||||||||||||||||| |||| ||||||||||||||    
T  20469830 taatcattttaattcagactctctgaaaggctatacatttataaacaacttcctttcctgccccaaagaccaactcataatatcacgtgcgacaaagatc 20469731  T
Q  203 gcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||||||| |||||| ||||||||| |||||||||||||||||||| ||  |||||||||||||||    
T  20469730 gcaagaactctaagtgaggctgactgccactgagtaactcgcgaggcgatccactctactcgctat 20469665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 22 - 268
Target Start/End: Complemental strand, 21618826 - 21618581
Alignment:
Q  22 aacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagac 121  Q
    ||||||||||||||||||| |||||| |||| |||||||||| | |||||||||||| |||||||||||  ||||||| |||| ||||| ||||||||||    
T  21618826 aacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatttatctcaaattatccaacaagaatattcataataattcagac 21618727  T
Q  122 tcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaagg 221  Q
    |||| |||  |  | |   ||||||||||||||||||||||||| ||||||||||| | ||| | | |||||| ||||||||||||||| ||||  || |    
T  21618726 tcactgaacaacaacataattataaacaacttccattcctaccc-aaagaccaacttagaacgttacgtgcgaaaaagatcgcaagaaccctaaacaaag 21618628  T
Q  222 ctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
     ||| | |||||||||||||||||||| ||| |||||||||||||||    
T  21618627 ttgaattccactgagtaactcgcgaggcgagccactctactcgctat 21618581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 92 - 265
Target Start/End: Complemental strand, 25250614 - 25250442
Alignment:
Q  92 accaacaacaataatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtg 191  Q
    |||| ||||||||||||| |||||| ||| || |||||||  || ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  25250614 accatcaacaataatcattttaatttagattctccgaaaggctaaacctttataaacaactttcattcctaccccaaagaccaactcataacatcacgtg 25250515  T
Q  192 cgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgc 265  Q
    |||||||||| |||||||||||||| | |||||||| ||||||||| ||||| |||| ||| ||||||||||||    
T  25250514 cgacaaagattgcaagaacactaagcagggctgactgccactgagt-actcgtgaggcgagccactctactcgc 25250442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 92 - 265
Target Start/End: Complemental strand, 25314399 - 25314227
Alignment:
Q  92 accaacaacaataatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtg 191  Q
    |||| ||||||||||||| |||||| ||| || |||||||  || ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  25314399 accatcaacaataatcattttaatttagattctccgaaaggctaaacctttataaacaactttcattcctaccccaaagaccaactcataacatcacgtg 25314300  T
Q  192 cgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgc 265  Q
    |||||||||| |||||||||||||| | |||||||| ||||||||| ||||| |||| ||| ||||||||||||    
T  25314299 cgacaaagattgcaagaacactaagcagggctgactgccactgagt-actcgtgaggcgagccactctactcgc 25314227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 29914537 - 29914786
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||  | |||| |||| || ||||||| | | |||||||||||||||||||||   |||| ||||| | |||||||||||||    
T  29914537 aacaacttgaatgatatgaacgactatatttctatattatacaatattcgcataatatatgtatctcaaatcatccaaaaacaacattcatattaattca 29914636  T
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagta 218  Q
    ||||||| |||  |  |||   |||||||| |||| ||||||||||  |||||| |||| | ||| ||| ||||||||| |||| ||||||||||||  |    
T  29914637 gactcactgaacaacaatataattataaaccactttcattcctacctgaaagactaacttagaacgtcacgtgcgacaaggatcacaagaacactaaaca 29914736  T
Q  219 aggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||| ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  29914737 aggttgactgccactgagtaactcgcgaggcgagccactctactcgctat 29914786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 22357747 - 22357585
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattc 117  Q
    ||||||||||||||||| |||| ||| || | ||| |||||||| |||||||||||||||| || || ||||| ||||||||||  ||| |||||| ||     
T  22357747 aacaacttgaatgatataaacaacaacattttctatatcatacattttccacataatatatatagcttaaattaaccaacaacatcaattatattagttt 22357648  T
Q  118 agactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||| |||| ||||   ||||||||||||||||||||||||||||||||||| |||||||||||    
T  22357647 agattcactgaaaagctatacctttataaacaacttccattcctaccccaaggaccaactcat 22357585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 8952844 - 8952679
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||| ||||||||||||||||| |||| | | || | ||| |||||||| ||||||||  |||||| || || ||||| ||||||||||  ||| |||||    
T  8952844 ataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccaca--atatatatagcttaaattaaccaacaacatcaattatatt 8952747  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    |  | ||| |||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  8952746 agcttagattcactgaaaggctatacctttataaacaacttccattcctaccccaatgaccaactcat 8952679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 20565673 - 20565803
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    ||||| || |||||||||| || |||||| |||| |||||||||| | ||||||||||||||||||||||||   ||||||||| | |||||||||||||    
T  20565673 aacaatttcaatgatatgatcaacaatatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaacattcatattaattca 20565772  T
Q  119 gactcaccgaaagattatacctttataaaca 149  Q
    ||||||  ||||||  ||||  |||||||||    
T  20565773 gactcattgaaagacaatacaattataaaca 20565803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 263
Target Start/End: Original strand, 10953362 - 10953481
Alignment:
Q  143 ataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactc 242  Q
    ||||| |||||||||||||| ||||| | | |||||| ||| ||| |||||||||||||||||||||| ||||  |||  ||||| || ||||||| |||    
T  10953362 ataaataacttccattcctatcccaaggtc-aactcacaacttcacgtgcgacaaagatcgcaagaaccctaaacaagattgactgccgctgagtagctc 10953460  T
Q  243 gcgaggagagacactctactc 263  Q
    |||||| ||||||||||||||    
T  10953461 gcgaggcgagacactctactc 10953481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 25576758 - 25576632
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaac 240  Q
    |||||| |||| |||||||||||||||| || ||||||||||| ||| |||||||||||||||||| ||| ||||  ||||||| ||  | ||| | | |    
T  25576758 ttataatcaacctccattcctaccccaaggatcaactcataacctcacgtgcgacaaagatcgcaa-aaccctaaacaaggctgtctttctctgtgcagc 25576660  T
Q  241 tcgcgaggagagacactctactcgctat 268  Q
     ||||||| ||| |||||||||||||||    
T  25576659 ccgcgaggcgagccactctactcgctat 25576632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 23470021 - 23470094
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaa 215  Q
    ||||| |||| |||||||||||||||| || ||||||||||||||   ||||||||||||||||||||| ||||    
T  23470021 tataatcaacctccattcctaccccaatgatcaactcataacatctcctgcgacaaagatcgcaagaaccctaa 23470094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 20565863 - 20565934
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| |||||||||||||| |||||| |||||| |||||||  | |||||||||||||||| |||||||    
T  20565863 aacaactcgaatgatatgaacaacaatatttctacaacatacaacattcacataatatatgtatttcaaatt 20565934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 20572112 - 20572170
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| ||||||||||||||||||| ||||||||||||||  ||||||||| ||||||||    
T  20572112 caacctccattcctaccccaaagatcaactcataacatctcgtgcgacaaggatcgcaa 20572170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 24277400 - 24277230
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa-caataatcatat 111  Q
    |||||||||||||||||| ||| |||| | |||| | ||| |||||||| ||||| |||||||||| ||||| ||| | || ||||| || ||||||| |    
T  24277400 ataataacaacttgaatggtataaacaacgatattttctatatcatacattttcctcataatatatatatcttaaactaactaacaatcattaatcat-t 24277302  T
Q  112 taattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacat 185  Q
    | |||||||||| | |||||  |||| ||| || ||||||||||||||||| ||| |||| ||||||| |||||    
T  24277301 tgattcagactctctgaaagtctataactt-attaacaacttccattcctatccc-aagatcaactcacaacat 24277230  T

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Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 24384813 - 24384983
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa-caataatcatat 111  Q
    |||||||||||||||||| ||| |||| | |||| | ||| |||||||| ||||| |||||||||| ||||| ||| | || ||||| || ||||||| |    
T  24384813 ataataacaacttgaatggtataaacaacgatattttctatatcatacattttcctcataatatatatatcttaaactaactaacaatcattaatcat-t 24384911  T
Q  112 taattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacat 185  Q
    | |||||||||| | |||||  |||| ||| || ||||||||||||||||| ||| |||| ||||||| |||||    
T  24384912 tgattcagactctctgaaagtctataactt-attaacaacttccattcctatccc-aagatcaactcacaacat 24384983  T

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Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 25574372 - 25574307
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||||| |||| || ||||||||||||| || ||||||||||| ||| ||||||||||||||||||    
T  25574372 ttataatcaacctctattcctaccccaaggatcaactcataacctcacgtgcgacaaagatcgcaa 25574307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 25575565 - 25575500
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||||| |||| || ||||||||||||| || ||||||||||| ||| ||||||||||||||||||    
T  25575565 ttataatcaacctctattcctaccccaaggatcaactcataacctcacgtgcgacaaagatcgcaa 25575500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 5889063 - 5889016
Alignment:
Q  158 tcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgca 205  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||||    
T  5889063 tcctaccccaaaggtcaactcataacatcacgtgcgacaaagatcgca 5889016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 32608151 - 32608055
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatat 111  Q
    |||||||| ||||| ||||||| |||| || ||| |||| |||||||||| | |||||||||||||||||| |||||   ||||||||| | ||||||    
T  32608151 ataataaccacttggatgatat-aacaacattatttctatatcatacaatattcacataatatatgtatctaaaattattcaacaacaacattcatat 32608055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 18318978 - 18318942
Alignment:
Q  144 taaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||||||| |||||||||||||||||||||||||||    
T  18318978 taaacaactaccattcctaccccaaagaccaactcat 18318942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 21731362 - 21731298
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| |||| | |||||||||||||| |  |||||||||||||| |||||||||| ||||||||    
T  21731362 tataatcaaccttcattcctaccccaagggtcaactcataacatcttgtgcgacaaggatcgcaa 21731298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 21809482 - 21809418
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| |||| | |||||||||||||| |  |||||||||||||| |||||||||| ||||||||    
T  21809482 tataatcaaccttcattcctaccccaagggtcaactcataacatcttgtgcgacaaggatcgcaa 21809418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 172
Target Start/End: Complemental strand, 21406438 - 21406320
Alignment:
Q  54 atcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagactcaccgaaagattatacctttataaacaactt 153  Q
    |||||||||| | ||| ||||||||  ||||||||||  |||||||||    ||||||||||||||| |||  | ||||  ||||  ||||| |||||||    
T  21406438 atcatacaatattcacgtaatatatacatctcaaattacccaacaacatacttcatattaattcagattcattgtaagacaatacaattatatacaactt 21406339  T
Q  154 ccattcctaccccaaagac 172  Q
     ||||| ||||||||||||    
T  21406338 tcattcataccccaaagac 21406320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 21328105 - 21328052
Alignment:
Q  153 tccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||||||| |||||  || ||||||||||||||  ||||||||||||||||||    
T  21328105 tccattcctcccccatggatcaactcataacatctcgtgcgacaaagatcgcaa 21328052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 26740549 - 26740484
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||||| |||| |||| ||||||||||| || ||||||| ||||||   |||||||||||||||||    
T  26740549 ttataatcaacctccactcctaccccaaggatcaactcacaacatctcttgcgacaaagatcgcaa 26740484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 20766029 - 20765993
Alignment:
Q  144 taaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  20766029 taaacaactaccattccaaccccaaagaccaactcat 20765993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 175; Significance: 3e-94; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 13302041 - 13302295
Alignment:
Q  10 actgataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcat 109  Q
    ||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||  |||||||||| | ||||||||| ||||||    
T  13302041 actgataataacaacttgaatgatatgaacaacaatatttctatatcatacaatttccacataatatatagatctcaaattaaacaacaacaacaatcat 13302140  T
Q  110 attaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaa 209  Q
    |||||||||||||||| |||||| ||||| ||||||| |||||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||    
T  13302141 attaattcagactcactgaaagactatacatttataatcaacttccattcataccccaaagaccaactcagaaaatcaagtgcgacaaagatcgcaagaa 13302240  T
Q  210 cactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcg 264  Q
    |||||||||||||||||| ||||||||||||||| |||| ||| |||||||||||    
T  13302241 cactaagtaaggctgactgccactgagtaactcgtgaggcgagccactctactcg 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 51476234 - 51476400
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatc-tctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    ||||||||||||||||| |||| |||| |  |||  |||| |||||||| ||||||||||||||||||| || ||||| |||||||||| ||||||||||    
T  51476234 ataataacaacttgaataatataaacaacggtattatctatatcatacattttccacataatatatgtagcttaaattaaccaacaacattaatcatatt 51476333  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactca 179  Q
    | || ||| |||| ||||| ||||||||||||||||||| | ||||| |||||||||||||||||||    
T  51476334 agtttagattcactgaaaggttatacctttataaacaacattcattcttaccccaaagaccaactca 51476400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 42697031 - 42697227
Alignment:
Q  67 cacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctacccc 166  Q
    |||||||||||||||| ||| ||| | ||| |||| ||||||  | |||| ||| || | |||||  || ||||||||||||||||||||||||||||||    
T  42697031 cacataatatatgtatttcacattaatcaagaacattaatcagttcaatttagattctctgaaaggctaaacctttataaacaacttccattcctacccc 42697130  T
Q  167 aaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcg 264  Q
    || || ||||||||||||| | |||| | ||||||||||||||||||||||| | ||| || ||||||||| |||||||||| ||| |||||||||||    
T  42697131 aaggatcaactcataacataacgtgcaaaaaagatcgcaagaacactaagtaggactgtctgccactgagt-actcgcgaggcgagccactctactcg 42697227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 52983403 - 52983570
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||||| |||| | |||| | ||| |||||||| ||||||||||||||||||| || ||||| ||||||||||  ||| |||||    
T  52983403 ataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataatatatgtagcttaaattaaccaacaacatcaattatatt 52983502  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    |  | ||| |||  ||||   ||||||||||||||||||||||||||||||||||| |||||||||||    
T  52983503 agcttagattcagtgaaaagctatacctttataaacaacttccattcctaccccaaggaccaactcat 52983570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 265
Target Start/End: Original strand, 45754838 - 45754968
Alignment:
Q  134 tatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccact 233  Q
    |||| ||| |||||||||||||||||||| ||||| || ||||||| |||||||  ||||||||||||||||||||| ||||  |||| ||||| |||||    
T  45754838 tataacttaataaacaacttccattcctatcccaa-gatcaactcacaacatcacatgcgacaaagatcgcaagaaccctaaacaaggttgactgccact 45754936  T
Q  234 gagtaactcgcgaggagagacactctactcgc 265  Q
    ||||| ||||||||| ||| ||| ||||||||    
T  45754937 gagtagctcgcgaggcgagccacactactcgc 45754968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 18275173 - 18275343
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||||| |||| |||||| | ||| |||||||| ||||||||||||||||||| ||  |||| ||||||||||  ||| |||||    
T  18275173 ataataacaacttgaatgatataaacaacaatattttctatatcatacattttccacataatatatgtagcttgaattaaccaacaacatcaattatatt 18275272  T
Q  113 aat----tcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactca 179  Q
    |||    | ||| ||||  ||||  | |||||||||||||||||||||||| ||||||||  |||||||||    
T  18275273 aattagcttagattcacgaaaaggctgtacctttataaacaacttccattcttaccccaagaaccaactca 18275343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 18823864 - 18824031
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||| ||||||||||||||||| |||| | | || | ||| |||||| | |||||||||||||||| || || ||||| ||||||||||  ||| |||||    
T  18823864 ataacaacaacttgaatgatataaacaacgacattttctatatcatatattttccacataatatatatagcttaaattaaccaacaacatcaattatatt 18823963  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    |  | ||| |||| |||||| ||| |||| ||||||||||||||||||||||| || |||||||||||    
T  18823964 agcttagattcactgaaagactatgccttaataaacaacttccattcctaccctaaggaccaactcat 18824031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 13528588 - 13528417
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||| ||||||||||||||||| |||| | | || | ||| |||||||| |||||||||||||||| || ||  |||| ||||||||||  ||| |||||    
T  13528588 ataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccacataatatatatagcttgaattaaccaacaacatcaattatatt 13528489  T
Q  113 aattc----agactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||     ||| |||| |||||  ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  13528488 aattagcttagattcactgaaaggctatacttttataaacaacttccattcctaccccaaggaccaactcat 13528417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 18270519 - 18270689
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||| ||||||||| || | |||||| | ||| |||||||| ||||||||||||||||||| ||  |||| ||||||||||  ||| |||||    
T  18270519 ataataacaactagaatgatataaaaaacaatattttctatatcatacattttccacataatatatgtagcttgaattaaccaacaacatcaattatatt 18270618  T
Q  113 aat----tcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactca 179  Q
    |||    | ||| ||||  ||||  | |||||||||||||||||||||||| ||||||||  |||||||||    
T  18270619 aattagcttagattcacgaaaaggctgtacctttataaacaacttccattcttaccccaagaaccaactca 18270689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 21240042 - 21239953
Alignment:
Q  16 aataacaacttgaatgatatgaacatcaa-tatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaata 104  Q
    ||||||||||||||||||||||||| ||| ||| |||||| |||||||  | |||||||||||||||| |||||||  ||||||| ||||    
T  21240042 aataacaacttgaatgatatgaacaacaaatatttctacaacatacaacattcacataatatatgtatttcaaattatccaacaaaaata 21239953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 22124517 - 22124630
Alignment:
Q  155 cattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagac 254  Q
    |||||||||||||| || ||||||||||| ||| ||||||||| |||||||||||| ||||  |||| || ||  ||||| | | |||| |||| ||| |    
T  22124517 cattcctaccccaaggatcaactcataacctcacgtgcgacaaggatcgcaagaaccctaaacaaggatgtctgacactgtgcagctcgtgaggcgagcc 22124616  T
Q  255 actctactcgctat 268  Q
    ||||||||||||||    
T  22124617 actctactcgctat 22124630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 51323584 - 51323664
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||| |||||||||||||||||||| |||||| ||||||   | |||||||||||||||| |||||||  |||||||    
T  51323584 aacaacttaaatgatatgaacatcaatatttctacaacatacatcattcacataatatatgtatttcaaattatccaacaa 51323664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 24726742 - 24726829
Alignment:
Q  181 aacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||||||| ||||||||| |||||||||||| ||||  |||| | |||  ||||||||| ||||||||| ||| |||||||||||||||    
T  24726742 aacatcacgtgcgacaaggatcgcaagaaccctaaacaaggttaactggcactgagtagctcgcgaggcgagtcactctactcgctat 24726829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 19761889 - 19761824
Alignment:
Q  143 ataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaa 209  Q
    ||||||||||||| |||||| | ||| || ||||||| |||||||||||||||||||||||||||||    
T  19761889 ataaacaacttcctttcctatctcaa-gatcaactcacaacatcatgtgcgacaaagatcgcaagaa 19761824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 52940780 - 52940715
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||||| |||| | |||||||||||||| || ||||||||||||||  ||||||||||||||||||    
T  52940780 ttataatcaaccttcattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaa 52940715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 26065163 - 26065222
Alignment:
Q  147 acaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| |||||||||||||||| ||  |||||||||||||  ||||||||||||||||||    
T  26065163 acaacatccattcctaccccaaggataaactcataacatctcgtgcgacaaagatcgcaa 26065222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 20346029 - 20346087
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| ||  |||||||||||||  ||||||||||||||||||    
T  20346029 caacctccattcctaccccaaggattaactcataacatctcgtgcgacaaagatcgcaa 20346087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 27653118 - 27653060
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| || ||||||||||||||  |||| |||||||||||||    
T  27653118 caacctccattcctaccccaaggatcaactcataacatctcgtgcaacaaagatcgcaa 27653060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 21043183 - 21043110
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaa 215  Q
    ||||| |||| |||||||||||||||| |  ||||||||||| |||  ||| ||||||||||||||||| ||||    
T  21043183 tataatcaacctccattcctaccccaagggtcaactcataacctcacatgcaacaaagatcgcaagaaccctaa 21043110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 14238399 - 14238324
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||||||| ||||| ||| ||| |||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  14238399 ataataaccacttggatggtat-aacaacattatttctatatcatacaatattcacataatatatgtatctcaaatt 14238324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 47190819 - 47190883
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgca 205  Q
    |||||| |||| |||||||||||||||| || ||||| ||||| ||| |||||||||| ||||||    
T  47190819 ttataatcaacctccattcctaccccaaggatcaacttataacctcacgtgcgacaaaaatcgca 47190883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 28194336 - 28194289
Alignment:
Q  158 tcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgca 205  Q
    ||||||| |||||  ||||||||||||||| |||||||||||||||||    
T  28194336 tcctacctcaaaggtcaactcataacatcacgtgcgacaaagatcgca 28194289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 20587941 - 20588018
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacat-aatatatgtatctcaaatt 90  Q
    |||||||||||||||||||||| |||| || || | |||| |||||||| ||||||||| |||||||||| ||||||||    
T  20587941 ataataacaacttgaatgatat-aacaacattattttctatatcatacattttccacataaatatatgtaactcaaatt 20588018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 20592479 - 20592556
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacat-aatatatgtatctcaaatt 90  Q
    |||||||||||||||||||||| |||| || || | |||| |||||||| ||||||||| |||||||||| ||||||||    
T  20592479 ataataacaacttgaatgatat-aacaacattattttctatatcatacattttccacataaatatatgtaactcaaatt 20592556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 20958340 - 20958452
Alignment:
Q  155 cattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagac 254  Q
    ||||| ||| |||| || |||||||||||| |  |||||||||||||||||| ||| ||||  ||||||| ||  || || | | ||||||||| ||| |    
T  20958340 cattcttacaccaaggatcaactcataaca-ctcgtgcgacaaagatcgcaaaaaccctaaacaaggctgtctgacattgtgcagctcgcgaggtgagcc 20958438  T
Q  255 actctactcgctat 268  Q
    ||||||||||||||    
T  20958439 actctactcgctat 20958452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 35260971 - 35260918
Alignment:
Q  153 tccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||||| ||||||||| |  ||||||||||||||  ||||||||||||||||||    
T  35260971 tccattactaccccaatgttcaactcataacatctcgtgcgacaaagatcgcaa 35260918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 38887914 - 38887818
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatat 111  Q
    |||||||| ||||| ||| ||| |||| || ||| |||| |||||||||| | ||||||||||||||| ||||||||   ||||||||| | ||||||    
T  38887914 ataataaccacttggatggtat-aacaacattatttctatatcatacaatattcacataatatatgtacctcaaattattcaacaacaacattcatat 38887818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 51082515 - 51082556
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||| |||||||||| | ||||||||||||||||||||||||    
T  51082515 tctatatcatacaatattcacataatatatgtatctcaaatt 51082556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 7052842 - 7052767
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||||||| ||||| ||| ||| |||| || ||| |||| |||||||||| | ||| ||||||||||||||||||||    
T  7052842 ataataaccacttggatggtat-aacaacattatttctatatcatacaatattcacctaatatatgtatctcaaatt 7052767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 44822915 - 44822851
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatata 77  Q
    |||||||||||||||||||||| |||| | ||| | |||| |||||||| ||||| |||||||||    
T  44822915 ataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataatata 44822851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 170; Significance: 3e-91; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 4 - 268
Target Start/End: Original strand, 4070973 - 4071237
Alignment:
Q  4 acaacaactgataataacaacttgaatgata-tgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaa 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| ||||||||||     
T  4070973 acaacaactgataataacaacttgaatgataatgaacatcaatatctctat-tcatacaatttcctcataatatatgtatctcaaattaaccaacaacat 4071071  T
Q  103 taatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatc 202  Q
    ||||||| ||||||||||||| | |||||  |||||||||||||||||||| |||||  |||||||||| ||||||||||||| | ||||||||||||||    
T  4071072 taatcattttaattcagactctctgaaaggctatacctttataaacaactttcattctcaccccaaagatcaactcataacattacgtgcgacaaagatc 4071171  T
Q  203 gcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||||||| |||||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||    
T  4071172 gcaagaactctaagtaaggctgactgccaccgagtaactcgcgaggcgagccactctactcgctat 4071237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 268
Target Start/End: Complemental strand, 15096474 - 15096225
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||  |||||||||| | |||||||||||||    
T  15096474 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaacaacattcatattaattca 15096375  T
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagta 218  Q
     |||||| ||||||  ||||  ||||||||||||| |||||||||||||| |||||||| | ||| ||| ||||||||||||||||||||||| ||| ||    
T  15096374 aactcactgaaagacaatacaattataaacaactttcattcctaccccaaggaccaactaagaacgtcacgtgcgacaaagatcgcaagaacattaaata 15096275  T
Q  219 aggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||| ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  15096274 aggttgactgccactgagtaactcgcgaggcgagccactctactcgctat 15096225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 15281520 - 15281773
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||| ||||||| |||| || ||| | ||| |||||||| |||||||||||||||||||  ||||| | |||||||||| ||||||| |     
T  15281520 ataataacaacttggatgatat-aacaacattattttctatatcatacactttccacataatatatgtaattcaaaataaccaacaacattaatcattta 15281618  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacac 212  Q
    ||||||||||| | |||||  ||||||||| |||||||||||||||| || |||||||||||||| ||||||||| |||||||||||||||||||||  |    
T  15281619 aattcagactctctgaaaggctatacctttgtaaacaacttccattcttatcccaaagaccaacttataacatcacgtgcgacaaagatcgcaagaaatc 15281718  T
Q  213 taagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||||||||||||||| ||||||||| |||||||| | ||| |||||||||||||||    
T  15281719 taagtaaggctgactgccactgagt-actcgcgaagcgagccactctactcgctat 15281773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 268
Target Start/End: Complemental strand, 14219802 - 14219553
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| |||||  |||| |||||||||| | ||||||||||||||||||||||||  |||||||||| | |||||||||||||    
T  14219802 aacaacttgaatgatatgaacaacaatacttctatatcatacaatattcacataatatatgtatctcaaattatccaacaacaacattcatattaattca 14219703  T
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagta 218  Q
    ||||||| |||  |  |||  |||||||||||||| ||||||||||||||||||||| ||| ||| | | ||| |||| ||||||||||||| ||||  |    
T  14219702 gactcactgaacaacaatatatttataaacaactttcattcctaccccaaagaccaagtcagaacgttacgtgtgacagagatcgcaagaaccctaaaca 14219603  T
Q  219 aggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||| ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  14219602 aggttgactgccactgagtaactcgcgaggcgagccactttactcgctat 14219553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 15139384 - 15139610
Alignment:
Q  18 taacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataat-catattaatt 116  Q
    ||||||||||| |||||| |||| |||||| |||| |||||||||| | ||||||||||||||||||||||||  |||||||||||| | ||||||||||    
T  15139384 taacaacttgattgatataaacaacaatatttctatatcatacaatgttcacataatatatgtatctcaaattatccaacaacaatatttcatattaatt 15139483  T
Q  117 cagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaag 216  Q
    ||||||||| ||||||  ||||  ||||| ||||||| ||||||||||||||| ||||||||| ||| ||| |||||||||||||||||||| ||||||     
T  15139484 cagactcactgaaagacaatacaattatagacaactttcattcctaccccaaaaaccaactcagaacgtcacgtgcgacaaagatcgcaagagcactaaa 15139583  T
Q  217 taaggctgactaccactgagtaactcg 243  Q
     |||| ||||| |||||||||||||||    
T  15139584 caaggttgactgccactgagtaactcg 15139610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 14 - 264
Target Start/End: Complemental strand, 19558119 - 19557869
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatta 113  Q
    |||| |||||||||||||||||||||| | |||| |||| |||||||||| | ||||||||||||||||||||||||  |||||||||| | ||||||||    
T  19558119 ataacaacaacttgaatgatatgaacaactatatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaacaacattcatatta 19558020  T
Q  114 attcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacact 213  Q
    ||| |||||||| |||  |  |||   ||||||||||||| ||||| ||||||||||||||||||| ||| | | |||||| ||||||||||||||| ||    
T  19558019 atttagactcacggaacaacaatataattataaacaactttcattcttaccccaaagaccaactcagaacgttacgtgcgaaaaagatcgcaagaaccct 19557920  T
Q  214 aagtaaggctgactaccactgagtaactcgcgaggagagacactctactcg 264  Q
    ||  || ||||||| |||||||||||||||| ||| ||| |||||||||||    
T  19557919 aaacaatgctgactgccactgagtaactcgcaaggcgagccactctactcg 19557869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 268
Target Start/End: Complemental strand, 13133156 - 13132907
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| |||||| | || | |||||||| | ||||||||||||||||||||||||   ||||||| ||| |||||||||||||    
T  13133156 aacaacttgaatgatatgaacaacaatatttatataccatacaatattcacataatatatgtatctcaaattattcaacaacgatattcatattaattca 13133057  T
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagta 218  Q
    |||||||   |  |  |||   |||| ||||||||||||||||||||||| || ||||||| ||| ||| |||||| ||||||||||||||||||||  |    
T  13133056 gactcactacacaacaatataattatgaacaacttccattcctaccccaaggatcaactcagaacgtcacgtgcgaaaaagatcgcaagaacactaaaaa 13132957  T
Q  219 aggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||| ||||| |||||||||||||||||||| ||| |||||||||| ||||    
T  13132956 aggttgactgccactgagtaactcgcgaggcgagccactctactcactat 13132907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 48809315 - 48809090
Alignment:
Q  22 aacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagac 121  Q
    ||||||||||||||||||| |||||| |||| |||||||||| | ||||| |||||||| |||||||||  |||||| ||||| ||||||||||||||||    
T  48809315 aacttgaatgatatgaacaacaatatttctatatcatacaatattcacatcatatatgtgtctcaaattacccaacatcaatattcatattaattcagac 48809216  T
Q  122 tcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaagg 221  Q
    ||||   |  |  |||   |||| ||||||||| ||||||||||||| |||||||||| ||||||| |||||| ||||||||||||||||||||  ||||    
T  48809215 tcactacacaacaatataattatgaacaacttctattcctaccccaatgaccaactcagaacatcacgtgcga-aaagatcgcaagaacactaaacaagg 48809117  T
Q  222 ctgactaccactgagtaactcgcgagg 248  Q
     ||||||||||||||||||||||||||    
T  48809116 ttgactaccactgagtaactcgcgagg 48809090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 21 - 244
Target Start/End: Original strand, 16077586 - 16077809
Alignment:
Q  21 caacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattcaga 120  Q
    |||||||||||||||||||| |||||| |||| |||||||||| | ||||||||| |||||| |||||||  |||||||||| | ||||||||||||| |    
T  16077586 caacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatacatgtatttcaaattatccaacaacaacattcatattaattcaaa 16077685  T
Q  121 ctcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaag 220  Q
    ||||| |||  |  |||   ||||||||||||| |||||||||| |||| ||||||||| ||| ||| |||||| ||||||| ||||||||||||  |||    
T  16077686 ctcactgaacaacaatatgattataaacaactttcattcctaccacaaataccaactcagaacgtcacgtgcgaaaaagatctcaagaacactaaacaag 16077785  T
Q  221 gctgactaccactgagtaactcgc 244  Q
    | ||||| ||||||||||||||||    
T  16077786 gttgactgccactgagtaactcgc 16077809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 11053888 - 11054054
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||||| |||| |||||| | ||| |||||||| ||||||||||||||||||| |||||||| |||||||||| || |||||||    
T  11053888 ataataacaacttgaatgatataaacaacaatattttctatatcatacattttccacataatatatgtagctcaaattaaccaacaacattagtcatatt 11053987  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactca 179  Q
    | || ||| |||| | |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  11053988 agtttagattcactggaagactatacctttataaacaactttcattcctaccccaaagaccaactca 11054054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 13133346 - 13133216
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||   || |||||||| |||||||||||||    
T  13133346 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattattcagcaacaatattcatattaattca 13133247  T
Q  119 gactcaccgaaagattatacctttataaaca 149  Q
    ||||||| ||||||  ||||  |||||||||    
T  13133246 gactcactgaaagacaatacaattataaaca 13133216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 8135910 - 8135720
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||| ||||||| | |||||  | |||| ||| |||| |||||||||||  ||||| |||| ||  |||||||||||| |||||||||||||    
T  8135910 aacaacttgaataatatgaataacaataaatatacaacatgcaatctccacataataggtgtatttcaatttatccaacaacaatattcatattaattca 8135811  T
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaa 209  Q
     |||||| | ||||  ||||  ||||| ||||||| |||||||||||||||| |||||||| |||  ||  ||||||||||| ||||||||    
T  8135810 tactcactgtaagacaatacaattatatacaactttcattcctaccccaaagtccaactcagaacgacacatgcgacaaagaacgcaagaa 8135720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 3289616 - 3289446
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||| ||||||||| |||| |||||| | ||| |||||||| ||||||||||||||||||| ||  |||| ||||||||||  ||| |||||    
T  3289616 ataataacaactcgaatgatataaacaacaatattttctatatcatacattttccacataatatatgtagcttgaattaaccaacaacatcaattatatt 3289517  T
Q  113 aattc----agactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactca 179  Q
    ||||     ||| |||| |||||  |||||||||||||||||||||||||| ||||||||  |||||||||    
T  3289516 aattagcttagattcactgaaaggctatacctttataaacaacttccattcttaccccaagaaccaactca 3289446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 268
Target Start/End: Complemental strand, 22001049 - 22000804
Alignment:
Q  22 aacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaatt-caga 120  Q
    ||||||||||||||||||| |||||| || ||| |||| ||| | ||||||||||||||||  ||||||  ||||||||| || ||||| ||||| ||||    
T  22001049 aacttgaatgatatgaacaacaatatttccacaacatataatattcacataatatatgtattccaaattatccaacaacagtattcataataattacaga 22000950  T
Q  121 ctcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaag 220  Q
    ||||| | |||   | ||  |||||| |||||| ||||||||||||||  ||||||||  ||| ||  |||||||||||  ||||| ||||||||  |||    
T  22000949 ctcactgtaaggcaacacaattataagcaactttcattcctaccccaataaccaactctgaac-tc--gtgcgacaaaggacgcaaaaacactaaacaag 22000853  T
Q  221 gctgactaccactgagtaactcgcga-ggagagacactctactcgctat 268  Q
    | ||||| |||||||||||||||| | || |||  ||||||||||||||    
T  22000852 gttgactgccactgagtaactcgctatggcgagctactctactcgctat 22000804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 268
Target Start/End: Original strand, 42462168 - 42462294
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaact 241  Q
    ||||| |||| | |||||||||||||| |  ||||||||||| ||||||||||||||||| |||||||| ||||  ||||||||||  ||||| | | ||    
T  42462168 tataatcaaccttcattcctaccccaagggtcaactcataacctcatgtgcgacaaagattgcaagaaccctaaacaaggctgactggcactgtgcagct 42462267  T
Q  242 cgcgaggagagacactctactcgctat 268  Q
    ||||||| ||| |||||||||||||||    
T  42462268 cgcgaggcgaggcactctactcgctat 42462294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 268
Target Start/End: Complemental strand, 36705332 - 36705208
Alignment:
Q  143 ataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactc 242  Q
    |||| ||||||||||| ||||||||| | | ||||   ||||||| |||||||||||||||||||||| ||||  |||| ||||| |||||||||| |||    
T  36705332 ataaccaacttccatttctaccccaatgtc-aactatcaacatcacgtgcgacaaagatcgcaagaaccctaaacaaggttgactgccactgagtagctc 36705234  T
Q  243 gcgaggagagacactctactcgctat 268  Q
    |||||| ||| |||||||||||||||    
T  36705233 gcgaggcgagccactctactcgctat 36705208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 21735296 - 21735127
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtat--ctcaaattgaccaacaacaataatcata 110  Q
    |||||||||||||||||||||  |||| | |||| | |||  ||||||| |||||||||| |||||  ||  || || || ||||||||||  |||  ||    
T  21735296 ataataacaacttgaatgataataacaacgatattttctatctcatacattttccacatattatataaatagcttaagttaaccaacaacatcaatttta 21735197  T
Q  111 ttaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||| || ||| |||| |||||  ||||||||||||||||||||||||||||||| |||||||||||||||    
T  21735196 ttagtttagattcactgaaaggctatacctttataaacaacttccattcctaccacaaagaccaactcat 21735127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 1490014 - 1489934
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | |||||||||||||||| |||||||  |||||||    
T  1490014 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatatcaaattatccaacaa 1489934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 9177568 - 9177503
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  9177568 ttatatacaacctccattcctaccccaaagatcaactcataacatctcgtgcgacaaagatcgcaa 9177503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 16091975 - 16092040
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| ||||| |||||||||||||||| || ||||||||||||||  ||||||||||||||||||    
T  16091975 ttatatacaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaa 16092040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 14036422 - 14036481
Alignment:
Q  147 acaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| |||||||||||||||| || ||||||||||||||  ||||||||||||||||||    
T  14036422 acaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaa 14036481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 14044972 - 14045031
Alignment:
Q  147 acaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| |||||||||||||||| || ||||||||||||||  ||||||||||||||||||    
T  14044972 acaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaa 14045031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 14346452 - 14346511
Alignment:
Q  147 acaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| |||||||||||||||| || ||||||||||||||  ||||||||||||||||||    
T  14346452 acaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaa 14346511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 14355002 - 14355061
Alignment:
Q  147 acaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| |||||||||||||||| || ||||||||||||||  ||||||||||||||||||    
T  14355002 acaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaa 14355061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 17017363 - 17017305
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| ||||| |||||||||| || |||||||||||||| |||||||||||||||||||    
T  17017363 caacctccatccctaccccaaggatcaactcataacatcttgtgcgacaaagatcgcaa 17017305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 9725562 - 9725497
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||||||||| |||||||||||||||| || ||||| ||||||||  ||||||||| ||||||||    
T  9725562 ttataaacaacctccattcctaccccaaggatcaactaataacatctcgtgcgacaaggatcgcaa 9725497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 9033247 - 9033183
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| |||| |||||||||||||||| |  ||||||||||||||  ||||||||||||||||||    
T  9033247 tataaccaacctccattcctaccccaagggtcaactcataacatctcgtgcgacaaagatcgcaa 9033183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 130705 - 130644
Alignment:
Q  154 ccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaa 215  Q
    ||||||||||||||| || ||||||| ||| ||| |||||| ||||||||||||||| ||||    
T  130705 ccattcctaccccaaggatcaactcaaaacctcacgtgcgataaagatcgcaagaaccctaa 130644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 8757190 - 8757020
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa-caataatcatat 111  Q
    |||||||||||||||||||||| |||| | ||| | |||| |||||||| ||| |||||||||||  ||||| ||| | |||||||| || ||||||| |    
T  8757190 ataataacaacttgaatgatataaacaacgatattttctatatcatacatttttcacataatataaatatcttaaactaaccaacaatcattaatcat-t 8757092  T
Q  112 taattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacat 185  Q
    | |||||| ||| | | |||  |||| | |||| ||||||||||||||||| ||| |||| ||||||| |||||    
T  8757091 tgattcaggctctctgtaagtctataac-ttattaacaacttccattcctatccc-aagatcaactcacaacat 8757020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 13255914 - 13255959
Alignment:
Q  134 tatacctttataaacaacttccattcctaccccaaagaccaactca 179  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||    
T  13255914 tatacctttataaacaacttccattcttaccccaagaaccaactca 13255959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 13256009 - 13256054
Alignment:
Q  134 tatacctttataaacaacttccattcctaccccaaagaccaactca 179  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||    
T  13256009 tatacctttataaacaacttccattcttaccccaagaaccaactca 13256054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 43277614 - 43277518
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataa-tatatgtatctcaaattgaccaacaacaataatcat 109  Q
    |||||||||||||||||| ||| |||| || ||| | ||| |||||||| ||||||||||| ||||||||| ||| ||| |||||||||| |||||||    
T  43277614 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaatcat 43277518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 14258676 - 14258732
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  14258676 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaatt 14258732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 16460660 - 16460604
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  16460660 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaatt 16460604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 16579984 - 16580040
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  16579984 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaatt 16580040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 16585679 - 16585623
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  16585679 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaatt 16585623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 32301506 - 32301562
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  32301506 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaatt 32301562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 16996439 - 16996522
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctg 224  Q
    |||||| |||| |||||||||| || || |  ||||||| ||| ||| |||||||||||||||||||||| ||||  |||||||    
T  16996439 ttataatcaacctccattcctaacctaagggtcaactcaaaacctcacgtgcgacaaagatcgcaagaaccctaaacaaggctg 16996522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 40555537 - 40555451
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||| | ||| | |||| |||||||| |||||| ||||||||  ||||| ||| | ||||||||    
T  40555537 ataataacaacttgaatgatataaacaacgatattttctatatcatacattttccatataatataaatatcttaaactaaccaacaa 40555451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 3287179 - 3287275
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacat-aatatatgtatctcaaattgaccaacaacaataatcat 109  Q
    |||||||||||||||||| ||| |||| || || | |||| |||||||| ||||||||| ||||||||||| ||| ||| | |||||||| |||||||    
T  3287179 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaagcaacaacattaatcat 3287275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 10659624 - 10659564
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaa 209  Q
    ||||||||||| ||| ||||| || ||||| | ||||||| |||||||||||||||||||||    
T  10659624 caacttccatttctatcccaa-gatcaacttacaacatcacgtgcgacaaagatcgcaagaa 10659564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 14929085 - 14929044
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||| |||||||||| | ||||||||||||||||||||||||    
T  14929085 tctatatcatacaatattcacataatatatgtatctcaaatt 14929044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 15352551 - 15352510
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||| |||||||||| | ||||||||||||||||||||||||    
T  15352551 tctatatcatacaatattcacataatatatgtatctcaaatt 15352510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 11768820 - 11768756
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| |||| |||||||||||||||| |  | ||||||||||||  || |||||||||||||||    
T  11768820 tataatcaacctccattcctaccccaagggtcgactcataacatctcgtacgacaaagatcgcaa 11768756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 20487767 - 20487823
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| ||| |||||| | ||||||||||||||||||||||||    
T  20487767 atgaacaacattatgtctatatcttacaatattcacataatatatgtatctcaaatt 20487823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 48273600 - 48273636
Alignment:
Q  144 taaacaacttccattcctaccccaaagaccaactcat 180  Q
    |||||| || |||||||||||||||||||||||||||    
T  48273600 taaacagctaccattcctaccccaaagaccaactcat 48273636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 162; Significance: 2e-86; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 19 - 268
Target Start/End: Complemental strand, 31723398 - 31723149
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||    |||||||||| |||||||||||||    
T  31723398 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattatttaacaacaatattcatattaattca 31723299  T
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagta 218  Q
    ||||||| |||| | ||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  31723298 gactcactgaaatactatacatttataaacaacttcaattcctaccccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaacactaagta 31723199  T
Q  219 aggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||| | || |||||||||||||||||||| ||| |||||||||||||||    
T  31723198 aggccgtctgccactgagtaactcgcgaggcgagccactctactcgctat 31723149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 19 - 268
Target Start/End: Complemental strand, 22318744 - 22318495
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| ||||| ||||||||||||||||||||  |||||||||||| |||||||||||||    
T  22318744 aacaacttgaatgatatgaacaacaatatttctatatcatacaatatccacgtaatatatgtatctcaaattatccaacaacaatattcatattaattca 22318645  T
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagta 218  Q
    ||||||| ||||||  ||||  |||||| |||||| ||||||||||||||| ||||||||| ||| ||| ||||||||||||||||||||||||||| ||    
T  22318644 gactcactgaaagacaatacaattataagcaactttcattcctaccccaaaaaccaactcagaacgtcacgtgcgacaaagatcgcaagaacactaaata 22318545  T
Q  219 aggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||| |||||    
T  22318544 aggctgactgccactgagtaactcgcgaggcgagccactctactagctat 22318495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 67 - 268
Target Start/End: Complemental strand, 36727895 - 36727694
Alignment:
Q  67 cacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctacccc 166  Q
    ||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||    
T  36727895 cacataatatatgtatctcaaattattcaacaacaatattcatattaattcagactcactgaaagactatacatttataaacaacttccattcctacccc 36727796  T
Q  167 aaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgct 266  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||    
T  36727795 aaagacaaactcataacatcacgtgcgacaaagatcgcaagaacactaagtaaggctgactgtcactgagtaactcgcgaggcgagccactctactcgct 36727696  T
Q  267 at 268  Q
    ||    
T  36727695 at 36727694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 14 - 268
Target Start/End: Complemental strand, 17907763 - 17907508
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||| |||||||||||||||||||| |||||| | ||| |||||||  |||||||||||||||||||| ||| ||| |||||||||| ||||||| ||    
T  17907763 ataatatcaacttgaatgatatgaacaacaatattttctatatcatactttttccacataatatatgtatttcacattaaccaacaacattaatcatttt 17907664  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacac 212  Q
    |||| ||| |||| |||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||| |    
T  17907663 aatttagattcactgaaaggctatacctttataaacaacttccatttctaccccaaagaccaactcataacatcaggtgtgacaaagatcgcaagaactc 17907564  T
Q  213 taagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||| ||||||||||| |||||||||||||||||||  ||| |||||||||||||||    
T  17907563 taactaaggctgactgccactgagtaactcgcgagccgagccactctactcgctat 17907508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 49 - 265
Target Start/End: Original strand, 17217881 - 17218097
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagactcaccgaaagattatacctttataaac 148  Q
    |||| |||||||| |||||||||||||||||||  ||||| | ||| |||||| ||||||| | ||| ||||||| | || || ||||||||||  ||||    
T  17217881 tctatatcatacactttccacataatatatgtaattcaaaataaccgacaacattaatcatttaaatacagactctctgagaggttatacctttgaaaac 17217980  T
Q  149 aacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgagg 248  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||| |||| ||||||||||||||||||||    
T  17217981 aacttccattcctacccgaaagaccaactcataacatcacgtgcgataaagatcgaaagaaccctaagtaaggccgactgccactgagtaactcgcgagg 17218080  T
Q  249 agagacactctactcgc 265  Q
     ||| ||||||||||||    
T  17218081 cgagccactctactcgc 17218097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 23947458 - 23947711
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||||| ||||  ||||| | ||| |||||||| ||||||||||||||||||| ||||| || ||||| |||| ||||||| ||    
T  23947458 ataataacaacttgaatgatataaacaataatattttctatatcataca-tttccacataatatatgtagctcaa-ttaaccaaaaacattaatcatttt 23947555  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacac 212  Q
    ||||||||||||| |||  |  |||   ||||||||||||| ||||||||||||||||||||||||  | ||||| |||||||||||||| ||||||| |    
T  23947556 aattcagactcactgaaccacaatataattataaacaactttcattcctaccccaaagaccaactctgagcatcacgtgcgacaaagatcccaagaaccc 23947655  T
Q  213 taagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||  |||| ||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  23947656 taaacaaggttgactgccactgagttactcgcgaggcgagccactctactcgctat 23947711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 23888982 - 23889148
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||| ||||| |||| |||||||| ||| |||||||| ||||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  23888982 ataataacaacttgaacgatataaacaacaatatcttctatatcatacattttccacataatatatgtagctcaaattaaccaacaacattaatcatatt 23889081  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactca 179  Q
    | || ||| |||| ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  23889082 agtttagattcactgaaaggttatacttttataaacaacttccattcctaccccaaagtccaactca 23889148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 22 - 268
Target Start/End: Complemental strand, 45471244 - 45470998
Alignment:
Q  22 aacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagac 121  Q
    ||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||  |||||| ||||| | ||||||||||||||    
T  45471244 aacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattatccaacatcaatatttatattaattcagac 45471145  T
Q  122 tcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaagg 221  Q
    ||||   |  |  |||   |||| |||||||| |||||||| ||||| |||||||||  ||| ||| || ||| |||||||||||||| |||||  ||||    
T  45471144 tcactacacaacaatataattatgaacaactttcattcctatcccaaggaccaactcggaacgtcacgtccgaaaaagatcgcaagaaaactaaacaagg 45471045  T
Q  222 ctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
     ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  45471044 ttgactgccactgagtaactcgcgaggcgagccactctactcgctat 45470998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 241
Target Start/End: Original strand, 22244661 - 22244888
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||| ||||| ||||  ||||| | ||| |||||||| |||| |||||||||||||| || || || |||||||||| ||||||| ||    
T  22244661 ataataacaacttgaaagatataaacaataatattttctatatcatacattttcaacataatatatgtagcttaa-ttaaccaacaacattaatcatttt 22244759  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacac 212  Q
    ||||||||||||| |||  |  |||   ||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |    
T  22244760 aattcagactcactgaaccacaatataattataaacaactttcattcctaccccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaaccc 22244859  T
Q  213 taagtaaggctgactaccactgagtaact 241  Q
    |||  |||| ||||| |||||||||||||    
T  22244860 taaacaaggttgactgccactgagtaact 22244888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 215
Target Start/End: Complemental strand, 20025068 - 20024876
Alignment:
Q  22 aacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagac 121  Q
    ||||||||||||||||||| |||||| |||| | |||||||| | ||||||||||||||||||||||||  |||||| ||||| ||||||||||||||||    
T  20025068 aacttgaatgatatgaacaacaatatttctata-catacaatattcacataatatatgtatctcaaattatccaacatcaatattcatattaattcagac 20024970  T
Q  122 tcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaa 215  Q
    ||||   |  |  |||   |||| ||||||||||||||||||||||| |||||||||  ||| ||| |||||| |||||| |||||||||||||    
T  20024969 tcactacacaaaaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagattgcaagaacactaa 20024876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 36728114 - 36728008
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||   ||||||||||| |||||||||||||    
T  36728114 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaatattcatattaattca 36728015  T
Q  119 gactcac 125  Q
    |||||||    
T  36728014 gactcac 36728008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 9546 - 9672
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaac 240  Q
    ||||||||||||| ||||||||||| || ||| |||||| ||||||||||||||||| |||||||||||| ||||  |||| ||||| |||||||||| |    
T  9546 ttataaacaactttcattcctaccctaacgactaactcagaacatcatgtgcgacaa-gatcgcaagaaccctaaacaaggttgactgccactgagtagc 9644  T
Q  241 tcgcgaggagagacactctactcgctat 268  Q
    |||||||| ||| |||||||||||||||    
T  9645 tcgcgaggcgagccactctactcgctat 9672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 22584529 - 22584362
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatc-atat 111  Q
    |||||||| ||||||||||||| |||| | |||| | | | |||||||| ||| ||||||||||||||| || | ||| |||||||||| ||| | ||||    
T  22584529 ataataaccacttgaatgatataaacaacgatattttcaatatcatacatttttcacataatatatgtagcttagattaaccaacaacattaaaccatat 22584430  T
Q  112 taattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactca 179  Q
    || || ||| |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  22584429 tagtttagattcactgaaagactatacctttataaacaacttccattcctaccccaaataccaactca 22584362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 31723588 - 31723458
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | || |||||||||||||||||||||   ||||||||||| |||||||||||||    
T  31723588 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcagataatatatgtatctcaaattattcaacaacaatattcatattaattca 31723489  T
Q  119 gactcaccgaaagattatacctttataaaca 149  Q
     |||||| ||||||  ||||  |||||||||    
T  31723488 tactcactgaaagacaatacaattataaaca 31723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 268
Target Start/End: Complemental strand, 23900731 - 23900643
Alignment:
Q  180 taacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||| |||||| ||| ||||    
T  23900731 taacatcacgtgcgacaaagatcgcaagaacactaagtaaggttgactgccactgagtaactcacgaggcgagccactctcctcactat 23900643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 19699446 - 19699579
Alignment:
Q  134 tatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccact 233  Q
    |||| ||| |||||||||||||||||||| || || || ||||||| ||||||| |||||||||||||||||||||| ||||  |||| ||||| |||||    
T  19699446 tataacttaataaacaacttccattcctatcctaa-gatcaactcacaacatcacgtgcgacaaagatcgcaagaaccctaaacaaggttgactgccact 19699544  T
Q  234 gagtaactcgcgaggagagacactctactcgctat 268  Q
     |||  ||||| ||| ||| |||||||||||||||    
T  19699545 aagtcgctcgcaaggcgagccactctactcgctat 19699579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 5760842 - 5760922
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||  |||||||    
T  5760842 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 5760922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 22381637 - 22381510
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaac 240  Q
    |||||| |||| || ||||||||||||| ||  ||| ||||||||| ||||||||||||||||||||||| ||||  ||||||| ||  ||||| | |      
T  22381637 ttataatcaacctcgattcctaccccaaggataaacccataacatcttgtgcgacaaagatcgcaagaaccctaaacaaggctgtctgacactgtgcagt 22381538  T
Q  241 tcgcgaggagagacactctactcgctat 268  Q
    |||||||| ||| |||||||||||||||    
T  22381537 tcgcgaggcgagccactctactcgctat 22381510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 22525746 - 22525860
Alignment:
Q  153 tccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagag 252  Q
    |||||||||||||||| || ||||||||||||||  |||||||||||||||||| ||| ||||  ||||||||||  | ||| | | ||||||||| |||    
T  22525746 tccattcctaccccaatgatcaactcataacatctcgtgcgacaaagatcgcaa-aaccctaaacaaggctgactgtctctgtgcagctcgcgaggcgag 22525844  T
Q  253 acactctactcgctat 268  Q
     |||||||||||||||    
T  22525845 ccactctactcgctat 22525860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 142 - 268
Target Start/End: Complemental strand, 22253067 - 22252941
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaact 241  Q
    ||||| |||| |||||||||||||||| |  ||||||||||||||| |||||||||||||||||||||| ||||   |||||| ||  ||||  ||  ||    
T  22253067 tataatcaacctccattcctaccccaagggtcaactcataacatcacgtgcgacaaagatcgcaagaaccctaaacgaggctgtctggcactctgtcgct 22252968  T
Q  242 cgcgaggagagacactctactcgctat 268  Q
    ||||||| ||| |||| ||||||||||    
T  22252967 cgcgaggcgagccactatactcgctat 22252941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 134 - 268
Target Start/End: Complemental strand, 25849118 - 25848986
Alignment:
Q  134 tatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccact 233  Q
    |||| ||| |||||||||||||||||||| |  ||| |  |||||| ||||||| |||||||||||||||||||||| ||||  |||| |||   |||||    
T  25849118 tataacttaataaacaacttccattcctatcttaaa-attaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa-caaggttgatggccact 25849021  T
Q  234 gagtaactcgcgaggagagacactctactcgctat 268  Q
    ||||| ||||||||| ||| |||||||||||||||    
T  25849020 gagtagctcgcgaggtgagccactctactcgctat 25848986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 268
Target Start/End: Complemental strand, 20502003 - 20501877
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaact 241  Q
    ||||| |||| |||||||||||||||| |  || |||||||| ||| ||||||||| |||||||||||| ||||  |||||||  |  ||||| | | ||    
T  20502003 tataatcaacctccattcctaccccaagggtcatctcataacctcacgtgcgacaaggatcgcaagaaccctaaacaaggctgtttgacactgtgcagct 20501904  T
Q  242 cgcgaggagagacactctactcgctat 268  Q
    ||||||| ||| |||||||||||||||    
T  20501903 cgcgaggcgagccactctactcgctat 20501877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 22963321 - 22963257
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| ||||||||||||||||||||| |  ||||||||||||||  ||||||||||||||||||    
T  22963321 tataatcaacttccattcctaccccaagggtcaactcataacatctcgtgcgacaaagatcgcaa 22963257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 268
Target Start/End: Complemental strand, 17086055 - 17085930
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaact 241  Q
    ||||| |||| ||||||||||||| || |  ||||||||||||||  |||||||||||||||||| ||| ||||  ||||||| ||  || || | | ||    
T  17086055 tataatcaacctccattcctaccctaagggtcaactcataacatctcgtgcgacaaagatcgcaa-aactctaaacaaggctgtctgacaatgtgcagct 17085957  T
Q  242 cgcgaggagagacactctactcgctat 268  Q
    ||||||| ||| |||||||||||||||    
T  17085956 cgcgaggcgagccactctactcgctat 17085930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 20533304 - 20533246
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| || ||||||||||||||  ||||||||||||||||||    
T  20533304 caacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaa 20533246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 23668027 - 23668092
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||||| |||| |||||||||||||||| |  ||||||||||||||  ||||||||||||||||||    
T  23668027 ttataatcaacctccattcctaccccaagggtcaactcataacatctcgtgcgacaaagatcgcaa 23668092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 37515923 - 37515988
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||||||||| |||||||||||||||| || ||||| ||||||||  ||||||||| ||||||||    
T  37515923 ttataaacaacctccattcctaccccaaggatcaacttataacatctcgtgcgacaaggatcgcaa 37515988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 14103120 - 14103062
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| || |||||| |||||||  ||||||||||||||||||    
T  14103120 caacctccattcctaccccaaggatcaactcgtaacatctcgtgcgacaaagatcgcaa 14103062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 17439401 - 17439343
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| || |||||||||| |||  ||||||||||||||||||    
T  17439401 caacctccattcctaccccaaggatcaactcataatatctcgtgcgacaaagatcgcaa 17439343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 40492755 - 40492690
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| ||||| |||||||||||| ||| || ||||||| ||||||  ||||||||||||||||||    
T  40492755 ttatatacaacctccattcctaccacaaggatcaactcacaacatctcgtgcgacaaagatcgcaa 40492690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 21346127 - 21346071
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  21346127 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaatt 21346071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 23418753 - 23418840
Alignment:
Q  181 aacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||||||| |||||||| |||||||||||| ||||  |||| ||| |  ||||||||| | ||||| | ||| |||||||||||||||    
T  23418753 aacatcatatgcgacaaggatcgcaagaaccctaaacaaggttgaatgtcactgagtagcccgcgaagcgagccactctactcgctat 23418840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 39834065 - 39834112
Alignment:
Q  158 tcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgca 205  Q
    |||||||||||||  ||||||||||||||| ||| |||||||||||||    
T  39834065 tcctaccccaaaggtcaactcataacatcacgtgggacaaagatcgca 39834112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 180
Target Start/End: Original strand, 23450847 - 23450881
Alignment:
Q  146 aacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||||||||||||||||||||| |||||||||||    
T  23450847 aacaacttccattcctaccccaaggaccaactcat 23450881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 180
Target Start/End: Original strand, 34301925 - 34301959
Alignment:
Q  146 aacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||||||||||||||||||||| |||||||||||    
T  34301925 aacaacttccattcctaccccaaggaccaactcat 34301959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 6102505 - 6102464
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||| |||||||||| | ||||||||||||||||||||||||    
T  6102505 tctatatcatacaatattcacataatatatgtatctcaaatt 6102464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 19154776 - 19154723
Alignment:
Q  153 tccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||||||||| |||| || |||||| |||||||  ||||||||||||||||||    
T  19154776 tccattcctacaccaaggatcaactcgtaacatctcgtgcgacaaagatcgcaa 19154723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 22259158 - 22259064
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcat 109  Q
    |||||||||||||||||| ||| |||| || || | |||| |||||||  ||| |||||||||||||||| ||| ||| |||||||||| |||||||    
T  22259158 ataataacaacttgaatggtat-aacaacattattttctatatcatac-cttttcacataatatatgtatttcacattaaccaacaacattaatcat 22259064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 23914248 - 23914304
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||||||  | ||||||||||||||||||||||||    
T  23914248 atgaacaacattatttctatatcatacaacattcacataatatatgtatctcaaatt 23914304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 26222981 - 26222945
Alignment:
Q  144 taaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  26222981 taaacaactaccattcctacccgaaagaccaactcat 26222945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 22 - 268
Target Start/End: Complemental strand, 20810 - 20564
Alignment:
Q  22 aacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagac 121  Q
    ||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  20810 aacttgaatgatatgaacgacaatatttctatatcatacaattttcacataatatatgtatctcaaattatccaactacaataatcatattaattcagac 20711  T
Q  122 tcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaagg 221  Q
    |||| ||||||  || |  ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||     
T  20710 tcactgaaagacaatgcaattataaacaactttcattcctaccccaaagaccaactcagaacatcatgtgcgacaaagatcgcaagaacactaaataagc 20611  T
Q  222 ctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||||| |||||||||||||||||||| ||| |||||||||| ||||    
T  20610 ctgactgccactgagtaactcgcgaggcgagccactctactcactat 20564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 159; Significance: 1e-84; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 127599 - 127365
Alignment:
Q  4 acaacaactgataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaa 102  Q
    ||||||||||||||||||||||||||||||||||||| |||||| | ||| |||||||| ||| ||||||||||||||| |||||||| |||||||||||    
T  127599 acaacaactgataataacaacttgaatgatatgaacaacaatattttctatatcatacatttttcacataatatatgtagctcaaattaaccaacaacaa 127500  T
Q  103 taatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatc 202  Q
    |||||||||||||| |||||||| |||||  |||||||||||||||||||| |||||||| ||||| |||||||||||||||| | ||||||||||||||    
T  127499 taatcatattaatttagactcactgaaaggctatacctttataaacaactttcattcctatcccaaggaccaactcataacattacgtgcgacaaagatc 127400  T
Q  203 gcaagaacactaagtaaggctgactaccactgagt 237  Q
    ||||||||||||||||||||||||| |||||||||    
T  127399 gcaagaacactaagtaaggctgactgccactgagt 127365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 268
Target Start/End: Original strand, 397852 - 398008
Alignment:
Q  111 ttaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaac 210  Q
    ||||||||| ||| | |||||  |||| |||  |||||| ||| |||||||| |||| | | ||||||| ||||||| |||||||||  |||||||||||    
T  397852 ttaattcaggctctctgaaagtctataacttattaaacagctttcattcctatcccata-atcaactcacaacatcacgtgcgacaagtatcgcaagaac 397950  T
Q  211 actaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
     ||||  |||  ||||| |||||  ||| ||||||||| ||| |||||||||||||||    
T  397951 cctaaagaagtttgactgccactaggtagctcgcgaggcgagccactctactcgctat 398008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 1e-84; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 13179389 - 13179623
Alignment:
Q  4 acaacaactgataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaa 102  Q
    ||||||||||||||||||||||||||||||||||||| |||||| | ||| |||||||| ||| ||||||||||||||| |||||||| |||||||||||    
T  13179389 acaacaactgataataacaacttgaatgatatgaacaacaatattttctatatcatacatttttcacataatatatgtagctcaaattaaccaacaacaa 13179488  T
Q  103 taatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatc 202  Q
    |||||||||||||| |||||||| |||||  |||||||||||||||||||| |||||||| ||||| |||||||||||||||| | ||||||||||||||    
T  13179489 taatcatattaatttagactcactgaaaggctatacctttataaacaactttcattcctatcccaaggaccaactcataacattacgtgcgacaaagatc 13179588  T
Q  203 gcaagaacactaagtaaggctgactaccactgagt 237  Q
    ||||||||||||||||||||||||| |||||||||    
T  13179589 gcaagaacactaagtaaggctgactgccactgagt 13179623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 268
Target Start/End: Original strand, 16059480 - 16059742
Alignment:
Q  5 caacaactgataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaata 104  Q
    |||||||||||||||| |||||||||||| | |||| ||  || |||| |||||||| |||||||||||||||||||| ||||| | |||||||||| ||    
T  16059480 caacaactgataataataacttgaatgattt-aacaacatcatttctatatcatacactttccacataatatatgtatttcaaaataaccaacaacatta 16059578  T
Q  105 atcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgc 204  Q
    ||||| |||||||| |||| | ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  16059579 atcattttaattcaaactctctgaaaggttatacctttgtaaacaacttccattcctaccccaaagaccaactcataacatcacgtgcgacaatgatcgc 16059678  T
Q  205 aagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||||||||| |||||||||| | ||| |||||||||||| ||| ||| |||||||||||||||    
T  16059679 aagaacactaggtaaggctgattgccaatgagtaactcgcaaggcgagccactctactcgctat 16059742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 5 - 268
Target Start/End: Original strand, 16044620 - 16044882
Alignment:
Q  5 caacaactgataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaata 104  Q
    |||||||||||||||| |||||||||||| | |||| ||  || |||| |||||||| ||||| |||||||||||||| ||||| | |||||||||| ||    
T  16044620 caacaactgataataataacttgaatgattt-aacaacatcatttctatatcatacactttccgcataatatatgtatttcaaaataaccaacaacatta 16044718  T
Q  105 atcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgc 204  Q
    ||||| |||||||| |||| | ||||| |||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  16044719 atcattttaattcaaactctctgaaaggttatacctttgtaaacaactttcattcctaccccaaagaccaattcataacatcacgtgcgacaatgatcgc 16044818  T
Q  205 aagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||||||||| |||||||||| | |||||||||||||||||||| ||| |||||||||||||||    
T  16044819 aagaacactaggtaaggctgattgccactgagtaactcgcgaggcgagccactctactcgctat 16044882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 19 - 244
Target Start/End: Original strand, 11562882 - 11563107
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||| | |||||| |||| ||||| |||| | ||||||||||||||||||||||||   ||||||||||| |||||||||||||    
T  11562882 aacaacttgaatgatatgaataacaatatttctatatcattcaatattcacataatatatgtatctcaaattagtcaacaacaatattcatattaattca 11562981  T
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagta 218  Q
    ||||||| ||||| | ||||| ||||||||||||| ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| ||    
T  11562982 gactcactgaaagctaataccattataaacaactttcattcctaccccaaagaccaactcagaacgtcacgtgcgacaaagatcgcaagaacactaatta 11563081  T
Q  219 aggctgactaccactgagtaactcgc 244  Q
    ||||||||| |||||||  |||||||    
T  11563082 aggctgacttccactgatcaactcgc 11563107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 268
Target Start/End: Original strand, 16050097 - 16050357
Alignment:
Q  5 caacaactgataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaata 104  Q
    |||||||||||||||  |||||||||||||| |||| ||  || |||| |||||||| |||||||||||||||||||| ||||| | |||||||    ||    
T  16050097 caacaactgataatactaacttgaatgatat-aacaacatcatttctatatcatacactttccacataatatatgtatatcaaaataaccaacat---ta 16050192  T
Q  105 atcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctac-cccaaagaccaactcataacatcatgtgcgacaaagatcg 203  Q
    ||||| |||||||| || | | ||||| |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16050193 atcattttaattcaaacactctgaaaggttatacctttgtaaacatcttccattcctacacccaaagaccaactcataacatcatgtgcgacaaagatcg 16050292  T
Q  204 caagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||||||||||| |||||||||| | ||||| |||||||||||||| ||| ||||| |||||||||    
T  16050293 caagaacactaggtaaggctgattgccacttagtaactcgcgaggcgagccactccactcgctat 16050357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 20417336 - 20417502
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctct-acatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||||| |||| |||||||| | | |||||||| ||||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  20417336 ataataacaacttgaatgatataaacaacaatatcttttatatcatacattttccacataatatatgtagctcaaattaaccaacaacattaatcatatt 20417435  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactca 179  Q
    | || ||| |||| |||||  ||||| |||||||||||||||||  |||||||||||||||||||||    
T  20417436 agtttagattcactgaaaggctatacatttataaacaacttccaaccctaccccaaagaccaactca 20417502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 247
Target Start/End: Complemental strand, 17259011 - 17258786
Alignment:
Q  22 aacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagac 121  Q
    ||||||||||||||||||| |||||| |||| |||||||||| | ||||||||| |||||||| |||||  | |||| ||||| ||||||||||||||||    
T  17259011 aacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatacatgtatcttaaattatctaacatcaatattcatattaattcagac 17258912  T
Q  122 tcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaagg 221  Q
    ||||   || | ||||   |||| |||||||| |||||||||||||| |||||||||| ||| ||| ||| || ||||||||||||||||||||  || |    
T  17258911 tcactacaaaactatataattatgaacaacttacattcctaccccaaggaccaactcagaacctcacgtgtgaaaaagatcgcaagaacactaaacaaag 17258812  T
Q  222 ctgactaccactgagtaactcgcgag 247  Q
     ||||||||| || ||||||||||||    
T  17258811 ttgactaccaatgcgtaactcgcgag 17258786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 14818282 - 14818449
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||||| |||| | |||| | ||| |||||||| |||||||||||||||| || || ||||| ||||||||||  ||| |||||    
T  14818282 ataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataatatatatagcttaaattaaccaacaacatcaattatatt 14818381  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    | || ||| |||| ||||   ||||||||||||||||||| |||||||||||||||||||||||||||    
T  14818382 agtttagattcactgaaaagctatacctttataaacaactcccattcctaccccaaagaccaactcat 14818449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 11192200 - 11192313
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    ||||||||||||||||||||||  ||||| |||| |||||||||| | ||||||||||||||||||||||||   ||||||||||| |||||||||||||    
T  11192200 aacaacttgaatgatatgaacaataatatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaatattcatattaattca 11192299  T
Q  119 gactcaccgaaaga 132  Q
    ||||||| ||||||    
T  11192300 gactcactgaaaga 11192313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 11562688 - 11562818
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    ||||| |||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||| ||||   ||||||||||| |||||||||||||    
T  11562688 aacaatttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctctaattattcaacaacaatattcatattaattca 11562787  T
Q  119 gactcaccgaaagattatacctttataaaca 149  Q
    ||||||| ||||||  ||||  |||||||||    
T  11562788 gactcactgaaagacaatacaattataaaca 11562818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 134 - 268
Target Start/End: Complemental strand, 11886344 - 11886211
Alignment:
Q  134 tatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccact 233  Q
    |||| ||| |||||||||||||||||||| ||||| || ||||||| ||||||| ||||||| || |||||||| || ||||  |||| |||||||||||    
T  11886344 tataacttaataaacaacttccattcctatcccaa-gatcaactcacaacatcacgtgcgacgaacatcgcaaggaccctaaacaaggttgactaccact 11886246  T
Q  234 gagtaactcgcgaggagagacactctactcgctat 268  Q
    ||||||||||||||| ||| |||||||||||||||    
T  11886245 gagtaactcgcgaggcgagccactctactcgctat 11886211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 6155897 - 6155998
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||| ||||||||||||||||   ||||||||||| |||||||||||||    
T  6155897 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataacatatgtatctcaaattattcaacaacaatattcatattaattca 6155996  T
Q  119 ga 120  Q
    ||    
T  6155997 ga 6155998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 180
Target Start/End: Complemental strand, 52338723 - 52338592
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagactcaccgaaagattatacctttataaac 148  Q
    |||| |||||||| |||||||||||||||| || || ||||| ||||||||||  ||| ||||||  | ||| |||| ||||   |||||||||||||||    
T  52338723 tctatatcatacattttccacataatatatatagcttaaattaaccaacaacatcaattatattagcttagattcactgaaaagctatacctttataaac 52338624  T
Q  149 aacttccattcctaccccaaagaccaactcat 180  Q
    |||||||||||||||||||| |||||||||||    
T  52338623 aacttccattcctaccccaatgaccaactcat 52338592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 10550526 - 10550693
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||||| |||| | ||| | |||| |||||||| ||||||||||| |||| || || ||||| ||||||||||  ||| |||||    
T  10550526 ataataacaacttgaatgatataaacaacgataatttctatatcatacattttccacataaaatatatagcttaaattaaccaacaacatcaattatatt 10550625  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    | || | | | || || ||  ||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  10550626 agtttatattgactgagaggctatacttttataaacaacttccattcctatcccaaggaccaactcat 10550693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 17548345 - 17548174
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||| ||||||||||||||||| |||| | || | | ||| |||||||| |||||||||||||||| || ||  |||| ||||||||||  ||| |||||    
T  17548345 ataacaacaacttgaatgatataaacaacgattttttctatatcatacattttccacataatatatatagcttgaattaaccaacaacatcaattatatt 17548246  T
Q  113 aattc----agactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||     ||| |||| |||||  ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  17548245 aattagcttagattcactgaaaggctatacttttataaacaacttccattcctaccccaaggaccaactcat 17548174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 265
Target Start/End: Complemental strand, 12512476 - 12512361
Alignment:
Q  149 aacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgagg 248  Q
    ||||| |||| ||||||||| || ||||||  ||||||| |||||||||||||||||||||| ||||  |||| ||||| |||||||||| |||||||||    
T  12512476 aactttcatttctaccccaa-gatcaactctcaacatcacgtgcgacaaagatcgcaagaaccctaaacaaggttgactgccactgagtagctcgcgagg 12512378  T
Q  249 agagacactctactcgc 265  Q
     ||| ||||||||||||    
T  12512377 cgagccactctactcgc 12512361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 17046471 - 17046551
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||  |||||||    
T  17046471 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 17046551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 54876226 - 54876146
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||  |||||||    
T  54876226 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 54876146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 11192390 - 11192470
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||| ||||||||||||||  |||||||    
T  11192390 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataataaatgtatctcaaattatccaacaa 11192470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 14441477 - 14441557
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||| ||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||  |||||||    
T  14441477 aacaacttgaatgacatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 14441557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 17691548 - 17691468
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | |||||||||||||||| |||||||  |||||||    
T  17691548 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatatcaaattatccaacaa 17691468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 19569109 - 19569041
Alignment:
Q  22 aacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||    
T  19569109 aacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaatt 19569041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 268
Target Start/End: Complemental strand, 14250750 - 14250663
Alignment:
Q  181 aacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||||||| ||||||||||||||||||||||  |||  |||| ||||| |||||||||| ||||||||| ||| |||||||||||||||    
T  14250750 aacatcacgtgcgacaaagatcgcaagaaccttaaacaaggttgactgccactgagtacctcgcgaggcgagccactctactcgctat 14250663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 52213271 - 52213105
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||| ||||||||||| |||| | |||| | ||| || ||||| ||||||||||||||||  | || ||||| ||||||||||  ||| |||||    
T  52213271 ataataacaatttgaatgatataaacaacgatattttctatataatacattttccacataatatatacaacttaaattaaccaacaacataaattatatt 52213172  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    | || ||| ||||  |||   |||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  52213171 agtt-agattcactaaaatgctataccttcataaacaactttcatccctaccccaaagaccaactcat 52213105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 179
Target Start/End: Complemental strand, 11850405 - 11850279
Alignment:
Q  57 atacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattc----agactcaccgaaagattatacctttataaacaact 152  Q
    ||||| ||||||||||||||||||| ||  |||| ||||||||||  ||| |||||||||     ||| |||| |||||  |||||||||||||||||||    
T  11850405 atacattttccacataatatatgtagcttgaattaaccaacaacatcaattatattaattagcttagattcactgaaaggctatacctttataaacaact 11850306  T
Q  153 tccattcctaccccaaagaccaactca 179  Q
     |||||| ||||||||| |||||||||    
T  11850305 cccattcttaccccaaaaaccaactca 11850279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 6156015 - 6156086
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||||||||||||||||||||| ||| || |||| |||||||||| | ||||||| ||||||||||||||||    
T  6156015 aacaacttgaatgatatgaacaacaacatttctatatcatacaatattcacataacatatgtatctcaaatt 6156086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 45531410 - 45531247
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctct-acatcatacaatttccacataa-tatatgtatctcaaattgaccaacaacaataatcatat 111  Q
    |||||||||||||||||| ||| |||| || ||||| | | |||||||| ||||||||||| |||||||| |||||||| || ||| ||  ||||||| |    
T  45531410 ataataacaacttgaatggtat-aacaacattatcttttatatcatacattttccacataaatatatgtaactcaaattaac-aactact-taatcat-t 45531315  T
Q  112 taattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactca 179  Q
    |||||||||||||| |||| |  |||   |||| |||||||| |||||||||||||||||||||||||    
T  45531314 taattcagactcactgaaacacaatataattatgaacaactttcattcctaccccaaagaccaactca 45531247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 9511906 - 9511828
Alignment:
Q  21 caacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||| |||||| |||||| ||||| || | |||||||||||||||| |||||||  |||||||    
T  9511906 caacttgaatgatatgaacaacaatatttctacaacataccatattcacataatatatgtatttcaaattatccaacaa 9511828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 9519881 - 9519803
Alignment:
Q  21 caacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||| |||||| |||||| ||||| || | |||||||||||||||| |||||||  |||||||    
T  9519881 caacttgaatgatatgaacaacaatatttctacaacataccatattcacataatatatgtatttcaaattatccaacaa 9519803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 17685586 - 17685506
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    ||||||||||||| |||||||| |||||| |||| |||||||||| | |||||||||||||||| || ||||  |||||||    
T  17685586 aacaacttgaatgctatgaacaacaatatttctatatcatacaatattcacataatatatgtatttctaattatccaacaa 17685506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 23395854 - 23395751
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||| ||||||||| |||| |||||| | ||| |||||||| ||||||||||||||||||| ||  |||| || |||||||  ||| |||||    
T  23395854 ataataacaactcgaatgatataaacaacaatattttctatatcatacattttccacataatatatgtagcttgaattaacgaacaacatcaattatatt 23395755  T
Q  113 aatt 116  Q
    ||||    
T  23395754 aatt 23395751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 32402862 - 32402799
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgca 205  Q
    ||||| |||| ||||||||||||| ||||| ||||||||||||||  |||||||||||||||||    
T  32402862 tataatcaacctccattcctaccctaaagatcaactcataacatctcgtgcgacaaagatcgca 32402799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 15447654 - 15447599
Alignment:
Q  155 cattcctaccccaaagaccaactcataacatcatgtgcgac-aaagatcgcaagaa 209  Q
    ||||||||||| || || ||||||||||||||||||||||| ||||||||||||||    
T  15447654 cattcctaccctaaggatcaactcataacatcatgtgcgacaaaagatcgcaagaa 15447599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 37427932 - 37428006
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaa 215  Q
    |||||| |||| | |||||||||||||| || ||||||||||||||  |||||||||  ||||||||||| ||||    
T  37427932 ttataaccaaccttcattcctaccccaaggatcaactcataacatctcgtgcgacaagaatcgcaagaaccctaa 37428006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 3394796 - 3394626
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa-caataatcatat 111  Q
    |||||||||||||||||||||| |||| | ||| | |||| |||||||| ||||||||||||||   ||||| ||| | |||||||| || ||||||| |    
T  3394796 ataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataatatgaatatcttaaactaaccaacaatcattaatcat-t 3394698  T
Q  112 taattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacat 185  Q
    | |||||| ||| | | |||  |||| | |||| ||||||||||||||||| ||| |||| ||||||| |||||    
T  3394697 tgattcaggctctctgtaagtctataac-ttattaacaacttccattcctatccc-aagatcaactcacaacat 3394626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 13523205 - 13523035
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa-caataatcatat 111  Q
    |||||||||||||||||||||| |||| | ||| | |||| |||||||| ||||| |||||||||  ||||| ||| | |||||||| || ||||||| |    
T  13523205 ataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataatataaatatcttaaactaaccaacaatcattaatcat-t 13523107  T
Q  112 taattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacat 185  Q
    | |||||| ||| | | |||  |||| | |||| ||||||||||||||||| ||| |||| ||||||| |||||    
T  13523106 tgattcaggctctctgtaagtctataac-ttattaacaacttccattcctatccc-aagatcaactcacaacat 13523035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 14153259 - 14153163
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataa-tatatgtatctcaaattgaccaacaacaataatcat 109  Q
    |||||||||||||||||||||| |||| || ||| | ||| |||||||  ||||||||||| ||||||||| ||| ||| |||||||||| |||||||    
T  14153259 ataataacaacttgaatgatat-aacaacattattttctatatcataccttttccacataaatatatgtatttcacattaaccaacaacattaatcat 14153163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 6819365 - 6819453
Alignment:
Q  12 tgataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||||  |||| | ||| | |||| |||||||| |||||||||||||||  ||||| ||| | ||||||||    
T  6819365 tgataataacaacttgaatgataataacaacgatattttctatatcatacattttccacataatataaatatcttaaactaaccaacaa 6819453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 12470126 - 12470182
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  12470126 atgaacaacattatatctatatcatacaatattcacataatatatgtatctcaaatt 12470182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 14671148 - 14671204
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  14671148 atgaacaacattatgtctatatcatacaatattcacataatatatgtatctcaaatt 14671204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 14682647 - 14682703
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  14682647 atgaacaacattatgtctatatcatacaatattcacataatatatgtatctcaaatt 14682703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 21618656 - 21618692
Alignment:
Q  144 taaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||||||| |||||||||||||||||||||||||||    
T  21618656 taaacaactaccattcctaccccaaagaccaactcat 21618692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 36166805 - 36166841
Alignment:
Q  144 taaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||||||| |||||||||||||||||||||||||||    
T  36166805 taaacaactaccattcctaccccaaagaccaactcat 36166841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 42353460 - 42353385
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||||||| ||||| ||| ||| |||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  42353460 ataataaccacttggatggtat-aacaacattatttctatatcatacaatattcacataatatatgtatctcaaatt 42353385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 316339 - 316402
Alignment:
Q  143 ataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||| ||||||| || ||||| || ||||||||||||||  ||||||||||||||||||    
T  316339 ataatcaacctccattcatatcccaatgatcaactcataacatctcgtgcgacaaagatcgcaa 316402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 187
Target Start/End: Original strand, 13919554 - 13919593
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatca 187  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  13919554 caacctccattcctaccccaaagatcaactcataacatca 13919593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 180
Target Start/End: Original strand, 12158658 - 12158692
Alignment:
Q  146 aacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||||||||||||||||||||| |||||||||||    
T  12158658 aacaacttccattcctaccccaaggaccaactcat 12158692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 18367552 - 18367466
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||| | ||| | || | |||||||| |||||||||||||||  ||||| ||| | ||||||||    
T  18367552 ataataacaacttgaatgatataaacaacgatattttcaatatcatacattttccacataatataaatatcttaaactaaccaacaa 18367466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 35065369 - 35065280
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacat-aatatatgtatctcaaattgaccaacaacaa 102  Q
    |||||||||||||||||||||| |||| || || | |||| |||||||  ||||||||| |||||||||| |||||||||  |||||||||    
T  35065369 ataataacaacttgaatgatat-aacaacattattttctatatcatactttttccacataaatatatgtaactcaaattgttcaacaacaa 35065280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 41173160 - 41173083
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacat-aatatatgtatctcaaatt 90  Q
    |||||||||||||||||||||| |||| || || | |||| |||||||| ||||||||| |||||||||| ||||||||    
T  41173160 ataataacaacttgaatgatat-aacaacattattttctatatcatacattttccacataaatatatgtaactcaaatt 41173083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 15246244 - 15246301
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgca 205  Q
    |||| |||||||||||| ||| || ||||||||||||||  |||||||||| ||||||    
T  15246244 caacctccattcctaccacaaggatcaactcataacatctcgtgcgacaaaaatcgca 15246301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 18700186 - 18700145
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||| |||||||||| | ||||||||||||||||||||||||    
T  18700186 tctatatcatacaatattcacataatatatgtatctcaaatt 18700145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 43889512 - 43889471
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||| |||||||||| | ||||||||||||||||||||||||    
T  43889512 tctaaatcatacaatattcacataatatatgtatctcaaatt 43889471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 14 - 268
Target Start/End: Complemental strand, 136411 - 136157
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatta 113  Q
    |||| |||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  136411 ataacaacaacttgaatgatatgaacaacaatatttctatatcatacaattttcacataatatatgtatctcaaattatccaactacaataatcatatta 136312  T
Q  114 attcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacact 213  Q
    |||||||||||| |||| |  ||    ||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  136311 attcagactcactgaaaaacaatgtaattataaacaactttcattcctaccccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaacact 136212  T
Q  214 aagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    || ||||| |||||  |||||||||||||| |||| ||| |||||||||||||||    
T  136211 aaataaggatgactgtcactgagtaactcgtgaggcgagccactctactcgctat 136157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 5 - 264
Target Start/End: Complemental strand, 2736 - 2475
Alignment:
Q  5 caacaactgataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaa-ttgaccaacaacaa 102  Q
    ||||||||||||||||| | |||||||||||||||| |||||| | ||| ||||||||||||||||||||||||||||||||||| || ||||||| ||     
T  2736 caacaactgataataacgatttgaatgatatgaacaacaatattttctatatcatacaatttccacataatatatgtatctcaaaattaaccaacatcat 2637  T
Q  103 taatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatc 202  Q
    |||| || ||||||||||||| | |||||  |||||||||||||||||||||||||| ||||| | |||||||||| ||||||||  |||||||||||||    
T  2636 taatgattttaattcagactctctgaaaggctatacctttataaacaacttccattcataccctacagaccaactcgtaacatcacatgcgacaaagatc 2537  T
Q  203 gcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcg 264  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| ||| |||||||||||    
T  2536 gcaagaactctaagtaaggctgactgccactgagtaactcgcgaggcgagccactctactcg 2475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 3e-66; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 268
Target Start/End: Complemental strand, 31735717 - 31735463
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||| ||||||||||| |||| |||||| | ||| |||| ||| |||||||||||||||||||| ||||||| |||||||||| ||||||| ||    
T  31735717 ataataacaatttgaatgatataaacaacaatattttctatatcaaacattttccacataatatatgtatttcaaattaaccaacaacattaatcatttt 31735618  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacac 212  Q
    ||||||||||||| |||  |  |||   |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  31735617 aattcagactcactgaaccacaatataattataaacaacttc-attcctaccccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaacac 31735519  T
Q  213 taagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
     |||| ||||| ||| ||||||||||||||| |||| ||| |||||||||||||||    
T  31735518 caagtgaggctaactgccactgagtaactcgtgaggcgagccactctactcgctat 31735463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 23500890 - 23501139
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||| ||||||||||||  |||||||||||| |||||||||||||    
T  23500890 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatataagtatctcaaattatccaacaacaatattcatattaattca 23500989  T
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagta 218  Q
    |  |||| ||||||   | |   |||||| ||||| || ||||||||||| |||||||||| ||| | | |||||||| ||||||||||||| ||||  |    
T  23500990 ggatcactgaaagacagtccaactataaataactttcactcctaccccaaggaccaactcagaacgttacgtgcgacagagatcgcaagaaccctaaaca 23501089  T
Q  219 aggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||| ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  23501090 aggttgactgccactgagtaactcgcgaggcgagccactctactcgctat 23501139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 268
Target Start/End: Complemental strand, 6083575 - 6083327
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    ||||| |||||||||||||||| |||| |||  ||| |||||||| | ||||||||||||| || |||| ||  ||||||||| || ||| |||||||||    
T  6083575 aacaatttgaatgatatgaacaacaatttct--acaacatacaatattcacataatatatgcatttcaatttatccaacaacattattcagattaattca 6083478  T
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagta 218  Q
    ||||||  ||||||| ||||  ||||||||||||| ||||||||||| ||||||||||||| |||  || |||||||||||| ||||||||||||||| |    
T  6083477 gactcattgaaagataatacaattataaacaactttcattcctaccctaaagaccaactcagaacgacacgtgcgacaaagaacgcaagaacactaagca 6083378  T
Q  219 aggctgactaccactgagtaactcgcga-ggagagacactctactcgctat 268  Q
    ||| ||||| ||| |||||||||||| | || ||| |||||||||||||||    
T  6083377 aggttgactgccattgagtaactcgctatggtgagccactctactcgctat 6083327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 13751148 - 13750981
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    ||||||||||||||||||| || |||| | |||| | ||| |||||||| |||||||||||||||| || || ||||| ||||||||||  ||| |||||    
T  13751148 ataataacaacttgaatgaaataaacaacgatattttctatatcatacattttccacataatatatatagcttaaattaaccaacaacatcaattatatt 13751049  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    | || ||| | || |||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  13751048 agtttagattaactgaaaggctatacctttataaacaacttccattcctacccctaagaccaactcat 13750981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 22212302 - 22212139
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||||| ||||  | ||| | ||| |||||||||||| |||||||||||||||||||||||| |||||||||| || |||||||    
T  22212302 ataataacaacttgaatgatataaacaaaattattttctatatcatacaattttcacataatatatgtatctcaaattaaccaacaacattattcatatt 22212203  T
Q  113 a-attcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaa 175  Q
    |  ||||||||||| | ||||  || |  |||||||| |||| |||||||||||||||||||||    
T  22212202 actttcagactcactgtaagacaatgcaattataaacgactttcattcctaccccaaagaccaa 22212139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 22376577 - 22376453
Alignment:
Q  144 taaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcg 243  Q
    |||||||||  |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||  |||   | || |||||||||||||||    
T  22376577 taaacaactctcattcctaccccaaggaccaactcataacatcttgtgcgacaaagatcgcaagaaccctaaacaagatagtctgccactgagtaactcg 22376478  T
Q  244 cgaggagagacactctactcgctat 268  Q
    || || |||||| ||||||||||||    
T  22376477 cgtggcgagacaatctactcgctat 22376453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 24267064 - 24267190
Alignment:
Q  54 atcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagactcaccgaaagattatacctttataaacaactt 153  Q
    |||||||| ||| |||||||||||| || || ||||| ||||||||||  ||| ||||||  | ||| |||| ||||| |||||||||||||||||||||    
T  24267064 atcatacatttttcacataatatatatagcttaaattaaccaacaacatcaattatattagcttagattcactgaaaggttatacctttataaacaactt 24267163  T
Q  154 ccattcctaccccaaagaccaactcat 180  Q
    ||||||||||||||| |||||||||||    
T  24267164 ccattcctaccccaaggaccaactcat 24267190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 23492104 - 23491974
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| || | | | || |||||||||| | ||||||||||||||||||||||||   ||||||||| | |||||||||||||    
T  23492104 aacaacttgaatgatatgaacaacactctttttatatcatacaatattcacataatatatgtatctcaaattattcaacaacaaaattcatattaattca 23492005  T
Q  119 gactcaccgaaagattatacctttataaaca 149  Q
    ||||||| ||||||  ||||  |||||||||    
T  23492004 gactcactgaaagacaatacaattataaaca 23491974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 23497702 - 23497572
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| || | | | || |||||||||| | ||||||||||||||||||||||||   ||||||||| | |||||||||||||    
T  23497702 aacaacttgaatgatatgaacaacactctttttatatcatacaatattcacataatatatgtatctcaaattattcaacaacaacattcatattaattca 23497603  T
Q  119 gactcaccgaaagattatacctttataaaca 149  Q
    ||||||| ||||||  ||||  |||||||||    
T  23497602 gactcactgaaagacaatacaattataaaca 23497572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 20078077 - 20077950
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaac 240  Q
    |||||| |||| |||||||||||||||| || ||||||||||||||  |||||||||||||||||||||| ||||  ||| ||| ||  ||||| | | |    
T  20078077 ttataatcaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaagaaccctaaacaagactgtctgacactgtgcagc 20077978  T
Q  241 tcgcgaggagagacactctactcgctat 268  Q
    |||||||| ||| |||||||||||||||    
T  20077977 tcgcgaggcgaggcactctactcgctat 20077950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 149 - 268
Target Start/End: Complemental strand, 24550939 - 24550821
Alignment:
Q  149 aacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgagg 248  Q
    |||||||||  ||||||||| || ||||||  ||||||||| |||||||||||||||||||| ||||  |||| ||||| |||||||||| |||||||||    
T  24550939 aacttccatctctaccccaa-gatcaactctcaacatcatgcgcgacaaagatcgcaagaaccctaaacaaggttgactgccactgagtagctcgcgagg 24550841  T
Q  249 agagacactctactcgctat 268  Q
     ||| |||| ||||||||||    
T  24550840 cgagccactatactcgctat 24550821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 16245567 - 16245687
Alignment:
Q  143 ataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactc 242  Q
    ||||||||||  |||||||||||||| ||||||||| ||||||  ||||||||||||||||||||||| ||||  |||| || ||| ||||  | |||||    
T  16245567 ataaacaactctcattcctaccccaaggaccaactcttaacatt-tgtgcgacaaagatcgcaagaaccctaaacaaggttgtctaacactatgcaactc 16245665  T
Q  243 gcgaggagagacactctactcg 264  Q
    |||||| ||| |||||||||||    
T  16245666 gcgaggcgagccactctactcg 16245687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 19655972 - 19655892
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||| ||||  |||||||    
T  19655972 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcgaattatccaacaa 19655892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 179
Target Start/End: Complemental strand, 5110525 - 5110399
Alignment:
Q  57 atacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattc----agactcaccgaaagattatacctttataaacaact 152  Q
    ||||| ||||||||||||||||||| ||  |||| ||||||||||  ||| |||||||||     ||| |||| |||||  |||||||||||||||||||    
T  5110525 atacattttccacataatatatgtagcttgaattaaccaacaacatcaattatattaattagcttagattcactgaaaggctatacctttataaacaact 5110426  T
Q  153 tccattcctaccccaaagaccaactca 179  Q
     |||||| ||||||||| |||||||||    
T  5110425 cccattcttaccccaaaaaccaactca 5110399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 18453401 - 18453474
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaa 215  Q
    ||||| |||| |||||||||||||||| || |||||||||||||| ||||||||||||||||||| ||| ||||    
T  18453401 tataatcaacctccattcctaccccaaggatcaactcataacatcttgtgcgacaaagatcgcaaaaaccctaa 18453474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 23491914 - 23491843
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||||||||||||||||||| |  ||||| |||| |||||||||| | ||||||||||||||||||||||||    
T  23491914 aacaacttgaatgatatgaaaaataatatttctatatcatacaatattcacataatatatgtatctcaaatt 23491843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 23497512 - 23497441
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||||||||||||||||||| |  ||||| |||| |||||||||| | ||||||||||||||||||||||||    
T  23497512 aacaacttgaatgatatgaaaaataatatttctatatcatacaatattcacataatatatgtatctcaaatt 23497441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 18696712 - 18696770
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| || ||||||||||||||  ||||||||||||||||||    
T  18696712 caacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaa 18696770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 20224168 - 20224226
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| || ||||||||||||||  ||||||||||||||||||    
T  20224168 caacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaa 20224226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 22118152 - 22118210
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| || ||||||||||||||  ||||||||||||||||||    
T  22118152 caacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaa 22118210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 28947654 - 28947738
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaata 104  Q
    |||||||||| ||||||||||| |||||| |||||| |||||||  | |||||||||||||||| |||||||  ||||||| ||||    
T  28947654 aacaacttga-tgatatgaacaacaatatttctacagcatacaacattcacataatatatgtatttcaaattatccaacaaaaata 28947738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 15896154 - 15896280
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcat-gtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaa 239  Q
    |||||| ||||||| ||| ||||||||| |||||||||||||| || | |||||||||||||||||||||| ||||  |||| || ||  ||||| | |     
T  15896154 ttataagcaacttc-atttctaccccaaggaccaactcataac-tcttcgtgcgacaaagatcgcaagaaccctaatcaaggttgtctgtcactgtgcag 15896251  T
Q  240 ctcgcgaggagagacactctactcgctat 268  Q
    |||| |||| ||| |||||||||||||||    
T  15896252 ctcgtgaggcgagccactctactcgctat 15896280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 176
Target Start/End: Complemental strand, 5289884 - 5289761
Alignment:
Q  57 atacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattc----agactcaccgaaagattatacctttataaacaact 152  Q
    ||||| ||||||||||||||||||| ||  |||| ||||||||||  ||| |||||||||     ||| |||| |||||  ||||||||||||| |||||    
T  5289884 atacattttccacataatatatgtagcttgaattaaccaacaacatcaattatattaattagcttagattcactgaaaggctatacctttataaccaact 5289785  T
Q  153 tccattcctaccccaaagaccaac 176  Q
      ||||| ||||||||| ||||||    
T  5289784 ctcattcttaccccaaaaaccaac 5289761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 267
Target Start/End: Original strand, 20136887 - 20137013
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaac 240  Q
    |||||| |||| | ||||||||||| || || ||||||||||||||  |||||||||  ||||||||||| ||||  ||||  | || || ||| | | |    
T  20136887 ttataaccaaccttcattcctaccctaaggatcaactcataacatctcgtgcgacaagaatcgcaagaaccctaaacaaggtagtctgcccctgtgcagc 20136986  T
Q  241 tcgcgaggagagacactctactcgcta 267  Q
    |||||||| ||| ||||||||||||||    
T  20136987 tcgcgaggcgagccactctactcgcta 20137013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 22195982 - 22195856
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaac 240  Q
    |||||| |||| | ||||||||||| || || ||||||||||||||  |||||||||  ||||||||||| ||||  ||||  | || || ||| | | |    
T  22195982 ttataaccaaccttcattcctaccctaaggatcaactcataacatctcgtgcgacaagaatcgcaagaaccctaaacaaggtagtctgcccctgtgcagc 22195883  T
Q  241 tcgcgaggagagacactctactcgcta 267  Q
    |||||||| ||| ||||||||||||||    
T  22195882 tcgcgaggcgagccactctactcgcta 22195856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 33443270 - 33443328
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| ||||||||||||| || || ||||||||||||||  ||||||||||||||||||    
T  33443270 caacctccattcctaccctaaggatcaactcataacatctcgtgcgacaaagatcgcaa 33443328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 15705339 - 15705283
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| |||||| | || |||||||||| | ||||||||||||||||||||||||    
T  15705339 atgaacaacaatatttttatatcatacaatattcacataatatatgtatctcaaatt 15705283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 16448471 - 16448435
Alignment:
Q  144 taaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||||||| |||||||||||||||||||||||||||    
T  16448471 taaacaactaccattcctaccccaaagaccaactcat 16448435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 16493366 - 16493430
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| |||| | |||||||||||||| |  |||||||||||||| |||||||||| ||||||||    
T  16493366 tataatcaaccttcattcctaccccaagggtcaactcataacatcttgtgcgacaaggatcgcaa 16493430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 18658464 - 18658528
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatata 77  Q
    |||||||||||||||||||||| |||| | ||| | |||| |||||||| |||||||||||||||    
T  18658464 ataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataatata 18658528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 19444076 - 19443988
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaaca 101  Q
    |||| ||||||||||||||||| |||| | |||| | ||| |||||||| |||||||||||||||| || ||  |||| ||||||||||    
T  19444076 ataacaacaacttgaatgatataaacaacgatattttctatatcatacattttccacataatatatatagcttgaattaaccaacaaca 19443988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 19773437 - 19773381
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  19773437 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaatt 19773381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 25738611 - 25738671
Alignment:
Q  155 cattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaa 215  Q
    |||||||| ||||| || ||||||||||||||   ||||||||||||||||||||| ||||    
T  25738611 cattcctaacccaaggatcaactcataacatctcatgcgacaaagatcgcaagaaccctaa 25738671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 268
Target Start/End: Complemental strand, 17229817 - 17229692
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaact 241  Q
    ||||| |||| |||||||||||||||| |  ||||||||||| ||| ||||||| |||||||| ||||| ||||   |||  | ||  ||||  | ||||    
T  17229817 tataatcaacctccattcctaccccaagggtcaactcataacctcacgtgcgac-aagatcgccagaaccctaaacgaggtagtctgtcactatgcaact 17229719  T
Q  242 cgcgaggagagacactctactcgctat 268  Q
    ||||||| ||| |||||||||||||||    
T  17229718 cgcgaggcgagccactctactcgctat 17229692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 610998 - 611062
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatata 77  Q
    |||||||||||||||||||||| |||| | ||| | |||| |||||||| ||||| |||||||||    
T  610998 ataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataatata 611062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 16133466 - 16133378
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaaca 101  Q
    |||| ||||||||||||||||| |||| | | || | ||| |||||||| |||||||||||||||| || ||  |||| ||||||||||    
T  16133466 ataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccacataatatatatagcttgaattaaccaacaaca 16133378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 29848299 - 29848235
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatata 77  Q
    |||||||||||||||||||||| |||| ||||| | |||| |||| ||| ||||| |||||||||    
T  29848299 ataataacaacttgaatgatataaacaacaatattttctatatcacacattttcctcataatata 29848235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 268
Target Start/End: Complemental strand, 3877 - 3628
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||| ||||||||||||||| |||||| |||| |||||| | | | ||||||||||||||||||||||||  ||||||||| |  |||||||||||||    
T  3877 aacaacctgaatgatatgaacaacaatatttctatatcatatattattcacataatatatgtatctcaaattatccaacaacattcttcatattaattca 3778  T
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagta 218  Q
    || |||| ||||||  |||| ||| ||||| |||| ||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||  |    
T  3777 gattcactgaaagacaatacatttgtaaacgactttcattcctaccccaaagaccaactcagaacgtcacgtgcgacaaagatcgcaagaacactaaaca 3678  T
Q  219 aggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||||||||| |||||||  ||||||||||| |||  ||||||||||||||    
T  3677 aggctgactgccactgaacaactcgcgaggcgagctactctactcgctat 3628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 21061784 - 21062038
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||| ||||||||||||||||| ||||||||||| | ||| |||| ||| ||||||||||||| |||||  | ||| | |||||||||| | ||||| |     
T  21061784 ataacaacaacttgaatgatataaacatcaatattttctatatcaaacattttccacataataaatgtaattgaaaataaccaacaacattgatcattta 21061883  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacac 212  Q
    ||||||||||| | |||||   |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||  |    
T  21061884 aattcagactctctgaaaggcaatacctttgtaaacaacttccactcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgtaataatcc 21061983  T
Q  213 taagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||  |||||||||| ||||||||| |||||||||  |||||||||||||||||||    
T  21061984 taaacaaggctgactgccactgagt-actcgcgagacgagacactctactcgctat 21062038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 4615860 - 4615693
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||||| |||| | |||| | ||| |||||||| ||||||||||||||||||| |||||||| ||||||||||  ||| ||||     
T  4615860 ataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataatatatgtaactcaaattaaccaacaacatcaattatatg 4615761  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    | || ||| |||| || ||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  4615760 agtttagattcactgagaggctatacctttataaacaacttccattcctaccccaaagaccaactcat 4615693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 14629945 - 14630075
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    ||||||||||||||||| ||||  ||||| |||| |||||||||| | ||||||||||||||||||||||||   ||||||||||| |||||||||||||    
T  14629945 aacaacttgaatgatataaacaataatatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaatattcatattaattca 14630044  T
Q  119 gactcaccgaaagattatacctttataaaca 149  Q
    ||||||| ||||||  |||| ||||||||||    
T  14630045 gactcactgaaagacaatacatttataaaca 14630075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 14933235 - 14933068
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||| | |||| | |||| | ||| |||||||| ||||||||||| |||| || || ||||| ||||||||||  ||| |||||    
T  14933235 ataataacaacttgaatgatgtaaacaacgatattttctatatcatacattttccacataacatatatagcttaaattaaccaacaacatcaattatatt 14933136  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    |  | ||| |||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  14933135 agcttagattcactgaaaggctatacctttataaacaacttccattcctaccccaaggaccaactcat 14933068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 16026880 - 16026765
Alignment:
Q  16 aataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaat 115  Q
    |||| |||||||||||||||||||| |||||| |||| |||| ||||| | ||||||||||||||||||||||||   ||||||||||| ||||||||||    
T  16026880 aatagcaacttgaatgatatgaacaacaatatttctatatcacacaatattcacataatatatgtatctcaaattattcaacaacaatattcatattaat 16026781  T
Q  116 tcagactcaccgaaag 131  Q
    |||||||||| |||||    
T  16026780 tcagactcactgaaag 16026765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 176
Target Start/End: Original strand, 27027993 - 27028156
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||||| |||| | ||| | |||| |||||||| |||||||||||||||| ||  | ||||| ||||||||||  ||| |||||    
T  27027993 ataataacaacttgaatgatataaacaacgatactttctatatcatacattttccacataatatatatagtttaaattaaccaacaacatcaattatatt 27028092  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaac 176  Q
    | || ||| |||| |||||  ||||||||||||| ||||||||||||||||||||| |||||||    
T  27028093 agtttagattcactgaaaggctatacctttataaccaacttccattcctaccccaaggaccaac 27028156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 9638080 - 9638185
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||   ||||||||| | |||||||||||||    
T  9638080 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaacattcatattaattca 9638179  T
Q  119 gactca 124  Q
    ||||||    
T  9638180 gactca 9638185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 268
Target Start/End: Original strand, 15612366 - 15612490
Alignment:
Q  143 ataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaag-aacactaagtaaggctgactaccactgagtaact 241  Q
    |||||||||||| ||||||| ||||| || ||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||| |||||| || |||    
T  15612366 ataaacaacttcaattcctatcccaa-gatcaactcataacatcacgtgcgacaaagatcgcaagaaacactaagtagggctgactgccactgggt-act 15612463  T
Q  242 cgcgaggagagacactctactcgctat 268  Q
    || |||| ||| |||||||||||||||    
T  15612464 cgtgaggcgagccactctactcgctat 15612490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 2585005 - 2584835
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||| ||||||||| |||| |||||| | ||| |||||||| ||||||||||||||||||| ||  |||| ||||||||||  ||| |||||    
T  2585005 ataataacaactcgaatgatataaacaacaatattttctatatcatacattttccacataatatatgtagcttgaattaaccaacaacatcaattatatt 2584906  T
Q  113 aattc----agactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactca 179  Q
    ||||     ||| |||| ||||| ||||| ||||||||||||||||||||| ||||||||  |||||||||    
T  2584905 aattagcttagattcactgaaaggttatatctttataaacaacttccattcttaccccaagaaccaactca 2584835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 6511832 - 6512002
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||| ||||||||| |||| |||||| | ||| |||||||| |||| |||||||||||||| ||  |||| ||||||||||  ||| |||||    
T  6511832 ataataacaactcgaatgatataaacaacaatattttctatatcatacattttctacataatatatgtagcttgaattaaccaacaacatcaattatatt 6511931  T
Q  113 aattc----agactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactca 179  Q
    ||||     ||| |||| |||||| ||||||||||||||||| |||||||||||||||||  |||||||||    
T  6511932 aattagcttagattcactgaaagactatacctttataaacaagttccattcctaccccaagaaccaactca 6512002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 14942441 - 14942273
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgt-atctcaaattgaccaacaacaataatcatat 111  Q
    |||||||||||||||||||| | |||| | |||| | ||| |||||||| ||||||||||| |||| | | || ||||| ||||||||||  ||| ||||    
T  14942441 ataataacaacttgaatgatgtaaacaacgatattttctagatcatacattttccacataacatatattagcttaaattaaccaacaacatcaattatat 14942342  T
Q  112 taattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||  | ||| |||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  14942341 tagcttagattcactgaaaggctatacctttataaacaacttccattcctaccccaaggaccaactcat 14942273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 266
Target Start/End: Original strand, 51992902 - 51993032
Alignment:
Q  134 tatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccact 233  Q
    |||| ||| |||||||||||||||||||| ||||| || ||||||| ||||||| |||||||||||||| ||||||| ||||  |||| ||||| |||||    
T  51992902 tataacttaataaacaacttccattcctaacccaa-gatcaactcacaacatcacgtgcgacaaagatcacaagaaccctaaacaagg-tgactgccact 51992999  T
Q  234 gagtaactcgcgaggagagacactctactcgct 266  Q
    ||||| ||||||||| ||| |||||||||||||    
T  51993000 gagtagctcgcgaggcgagccactctactcgct 51993032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 20899554 - 20899387
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||| ||||||||||||||||| |||| | | || | ||| |||||||| |||||||||||||||| || || ||||| ||||||||||  ||| |||||    
T  20899554 ataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccacataatatatatagcttaaattaaccaacaacatcaattatatt 20899455  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    |  | ||| |||| ||||  || |||||||||||||||||| |||||||||||||| |||||||||||    
T  20899454 agcttagattcactgaaaagttgtacctttataaacaactttcattcctaccccaaggaccaactcat 20899387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 53631216 - 53631136
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||  |||||||    
T  53631216 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 53631136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 13446710 - 13446876
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||| ||||||||| |||| | |||| | |||  ||||||| ||| ||||||||||||||| ||  |||| ||||||||||  ||| ||||     
T  13446710 ataataacaactcgaatgatataaacaacgatattttctatctcatacatttttcacataatatatgtagcttgaattaaccaacaacatcaattatatc 13446809  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    | || ||| |||| |||||  ||||||||||||| |||||| |||||||| |||||||||||||||||    
T  13446810 agtttagattcactgaaaggctatacctttataatcaactttcattccta-cccaaagaccaactcat 13446876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 268
Target Start/End: Original strand, 50160383 - 50160507
Alignment:
Q  143 ataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactc 242  Q
    ||||||||||  |||||||||||||| |||||||||||||||||  |||||||||||||||| | ||| ||||  |||| | ||| ||| ||||||||||    
T  50160383 ataaacaactatcattcctaccccaaggaccaactcataacatctcgtgcgacaaagatcgccaaaaccctaaacaagg-ttactgccaatgagtaactc 50160481  T
Q  243 gcgaggagagacactctactcgctat 268  Q
    |||| | ||| ||||||||| |||||    
T  50160482 gcgatgcgagccactctacttgctat 50160507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 18229996 - 18230084
Alignment:
Q  92 accaacaacaataatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||||||||  ||| |||||| || ||| |||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||    
T  18229996 accaacaacatcaattatattagtttagattcactgaaaggctatacctttataaacaactttcattcctaccccaaagaccaactcat 18230084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 16026699 - 16026628
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||| |||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||    
T  16026699 aacaatttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaatt 16026628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 26050378 - 26050251
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaac 240  Q
    |||||| |||| |||||||||| ||||| || ||||||| ||| |||||||||||||||||||||||||| ||||  |||| || ||  ||||| | | |    
T  26050378 ttataatcaacctccattcctaacccaaggatcaactcaaaacctcatgtgcgacaaagatcgcaagaaccctaaacaaggttgtctgacactgtgcagc 26050279  T
Q  241 tcgcgaggagagacactctactcgctat 268  Q
    ||| |||| ||| |||||||||||||||    
T  26050278 tcgtgaggcgagccactctactcgctat 26050251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 14630135 - 14630215
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||||| |||| ||  | |||||||||||||||| |||||||  |||||||    
T  14630135 aacaacttgaatgatatgaacaacaatatttctacaacatataacattcacataatatatgtatttcaaattatccaacaa 14630215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 268
Target Start/End: Complemental strand, 32466935 - 32466848
Alignment:
Q  181 aacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||||||| ||||||||||||| |||||||| |||   |||| ||||| |||||||||  ||||||||| ||| |||||||||||||||    
T  32466935 aacatcacgtgcgacaaagatagcaagaaccctacacaaggttgactgccactgagtggctcgcgaggcgagccactctactcgctat 32466848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 17333505 - 17333563
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| || ||||||||||||||  ||||||||||||||||||    
T  17333505 caacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaa 17333563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 268
Target Start/End: Complemental strand, 32306897 - 32306771
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaact 241  Q
    ||||| |||| |||||||||||||||| |  ||||||||||||||  |||||||||| ||||||||||| ||||  ||||  | ||  | ||| | | ||    
T  32306897 tataatcaacctccattcctaccccaagggtcaactcataacatctcgtgcgacaaaaatcgcaagaaccctaaacaaggtagtctgtctctgtgcagct 32306798  T
Q  242 cgcgaggagagacactctactcgctat 268  Q
    ||||||| ||| |||||||||||||||    
T  32306797 cgcgaggcgagccactctactcgctat 32306771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 13591829 - 13591764
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||||||||| |||||||||||||||| || ||||| ||||||||  ||||||||| ||||||||    
T  13591829 ttataaacaacctccattcctaccccaaggatcaactaataacatctcgtgcgacaaggatcgcaa 13591764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 13036520 - 13036440
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||||| ||| |||  | |||||||||||||||| | |||||  |||||||    
T  13036520 aacaacttgaatgatatgaacaacaatatttctacaacattcaacattcacataatatatgtattttaaattatccaacaa 13036440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 27996130 - 27996256
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaac 240  Q
    ||||||||||||||  ||| |||||||| ||||||||||||||    |||||||||||||| |||||||| ||||  |||| || ||  ||||| | | |    
T  27996130 ttataaacaacttcgtttc-taccccaaggaccaactcataactctttgtgcgacaaagattgcaagaaccctaaacaaggttgtctgtcactgtgcagc 27996228  T
Q  241 tcgcgaggagagacactctactcgctat 268  Q
    |||||||| ||| || ||||||||||||    
T  27996229 tcgcgaggcgagccattctactcgctat 27996256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 268
Target Start/End: Original strand, 40907297 - 40907416
Alignment:
Q  149 aacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgagg 248  Q
    ||||| |||||||| | ||| || ||||||||||||||  |||||||||||||| ||||||| ||||  |||| || ||  ||||| | | |||||||||    
T  40907297 aactttcattcctagcacaaggatcaactcataacatctcgtgcgacaaagatcacaagaaccctaaacaaggttgtctgacactgtgcagctcgcgagg 40907396  T
Q  249 agagacactctactcgctat 268  Q
     ||| |||| ||||||||||    
T  40907397 cgagccactttactcgctat 40907416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 26789556 - 26789613
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaa 198  Q
    |||||| |||| |||||||||||||||| || ||||||||||| ||| ||||||||||    
T  26789556 ttataatcaacctccattcctaccccaaggatcaactcataacctcacgtgcgacaaa 26789613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 3485176 - 3485251
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||||||| ||||| ||| ||| |||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  3485176 ataataaccacttggatggtat-aacaacattatttctatatcatacaatattcacataatatatgtatctcaaatt 3485251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 19738465 - 19738591
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcat-gtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaa 239  Q
    ||||||||||||||  ||| |||||||| |||||||||||||| || | |||||||||||||||||||||| ||||  |||| || ||  ||||| | |     
T  19738465 ttataaacaacttcgtttc-taccccaaggaccaactcataac-tcttcgtgcgacaaagatcgcaagaaccctaaacaaggttgtctgtcactgtgcag 19738562  T
Q  240 ctcgcgaggagagacactctactcgctat 268  Q
    ||||||||| ||  || ||||||||||||    
T  19738563 ctcgcgaggcgaaccattctactcgctat 19738591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 54798663 - 54798627
Alignment:
Q  144 taaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||||||| |||||||||||||||||||||||||||    
T  54798663 taaacaactaccattcctaccccaaagaccaactcat 54798627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 14825700 - 14825751
Alignment:
Q  155 cattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||||||||||||| || ||||||||||||||  ||||||||| ||||||||    
T  14825700 cattcctaccccaaggatcaactcataacatctcgtgcgacaaggatcgcaa 14825751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 15448205 - 15448119
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    ||||||| |||||||||||||| |||| | |||| | ||| |||||||| |||||||||||||||  ||||| ||| | ||||||||    
T  15448205 ataataaaaacttgaatgatataaacaacgatattttctatatcatacattttccacataatataaatatcttaaactaaccaacaa 15448119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 25090916 - 25090993
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacat-aatatatgtatctcaaatt 90  Q
    |||||||||||||||||||||| |||| || || | |||| |||||||| ||||||||| |||||||||| ||||||||    
T  25090916 ataataacaacttgaatgatat-aacaacattattttctatatcatacattttccacataaatatatgtaactcaaatt 25090993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 14280524 - 14280557
Alignment:
Q  144 taaacaacttccattcctaccccaaagaccaact 177  Q
    ||||||||| ||||||||||||||||||||||||    
T  14280524 taaacaactaccattcctaccccaaagaccaact 14280557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 15791992 - 15792049
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaa 198  Q
    |||||| |||| |||||||||||| ||| || ||||||||||| ||| ||||||||||    
T  15791992 ttataatcaacctccattcctacctcaatgatcaactcataacctcacgtgcgacaaa 15792049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 37018861 - 37018957
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataa-tatatgtatctcaaattgaccaacaacaataatcat 109  Q
    |||||||||||||||||| ||| |||| || ||| | ||| |||||||  ||||||||||| ||||||||| ||| ||| |||||||||| |||||||    
T  37018861 ataataacaacttgaatggtat-aacaacattattttctatatcataccttttccacataaatatatgtatttcacattaaccaacaacattaatcat 37018957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 8574778 - 8574742
Alignment:
Q  144 taaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  8574778 taaacaactaccattcctaccctaaagaccaactcat 8574742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 14852777 - 14852713
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| |||| |||||||| ||||||| |  ||||| ||||||||  ||||||||||||||||||    
T  14852777 tataatcaacctccattcccaccccaagggtcaacttataacatctcgtgcgacaaagatcgcaa 14852713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 19734590 - 19734626
Alignment:
Q  54 atcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||||||||| | ||||||||||||||||||||||||    
T  19734590 atcatacaatattcacataatatatgtatctcaaatt 19734626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1695 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 625 - 874
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||  |||||||||| | ||||| |||||||    
T  625 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaacaacattcataataattca 724  T
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagta 218  Q
    ||||||| |||  |  | |   | ||||||||||| ||||||||||||||||||||||||| ||| | | |||||| ||||||||||||||| ||||  |    
T  725 gactcactgaacaacaacataataataaacaactttcattcctaccccaaagaccaactcagaacgttacgtgcgaaaaagatcgcaagaaccctaaaca 824  T
Q  219 aggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||| ||||| ||| | |||||||||||||| ||| |||||||||||||||    
T  825 aggttgactgccagtaagtaactcgcgaggtgagccactctactcgctat 874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 63 - 268
Target Start/End: Complemental strand, 127162 - 126958
Alignment:
Q  63 tttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagactcaccgaaagattatacctttataaacaacttccattccta 162  Q
    |||||||||||||||||||| ||| ||| |||||||||| ||||||| |||||| ||| || | |||||  || ||||||||||||||||||||||||||    
T  127162 tttccacataatatatgtatttcacattaaccaacaacattaatcattttaatttagattctctgaaaggctaaacctttataaacaacttccattccta 127063  T
Q  163 ccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctact 262  Q
    || ||| |||||||||||||||||| ||||||||||||||||| |||||||||||| |||||| | |||| |||| |||||||||| ||| |||||||||    
T  127062 ccgcaaggaccaactcataacatcacgtgcgacaaagatcgcaggaacactaagtagggctgattgccacagagt-actcgcgaggcgagccactctact 126964  T
Q  263 cgctat 268  Q
     |||||    
T  126963 tgctat 126958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 60605 - 60556
Alignment:
Q  153 tccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatc 202  Q
    |||||||||||||||| |  ||||||||||||||  ||||||||||||||    
T  60605 tccattcctaccccaaggttcaactcataacatctcgtgcgacaaagatc 60556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 75 - 268
Target Start/End: Complemental strand, 4260 - 4069
Alignment:
Q  75 atatgtatctcaaattgaccaacaacaataatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagacca 174  Q
    ||||||||||||||||  |||||||||||  |||||||||||||||||||| |||||| || |   ||||||||||||| ||||||||||||||||||||    
T  4260 atatgtatctcaaattatccaacaacaatcttcatattaattcagactcactgaaagactacaa--ttataaacaactttcattcctaccccaaagacca 4163  T
Q  175 actcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||||| ||  ||| |||||||||||||||||||||||||||  |||| |||||  ||||||||||||||||||| ||| |||||||||| ||||    
T  4162 actcagaatgtcacgtgcgacaaagatcgcaagaacactaaacaaggttgactgacactgagtaactcgcgaggcgagccactctactcactat 4069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 75 - 268
Target Start/End: Complemental strand, 8820 - 8629
Alignment:
Q  75 atatgtatctcaaattgaccaacaacaataatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagacca 174  Q
    ||||||||||||||||  |||||||||||  |||||||||||||||||||| |||||| || |   ||||||||||||| ||||||||||||||||||||    
T  8820 atatgtatctcaaattatccaacaacaatcttcatattaattcagactcactgaaagactacaa--ttataaacaactttcattcctaccccaaagacca 8723  T
Q  175 actcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    ||||| ||  ||| |||||||||||||||||||||||||||  |||| |||||  ||||||||||||||||||| ||| |||||||||| ||||    
T  8722 actcagaatgtcacgtgcgacaaagatcgcaagaacactaaacaaggttgactgacactgagtaactcgcgaggcgagccactctactcactat 8629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 34185 - 34018
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||||| |||| |||||||| ||| |||||||| ||||||||||||||||||| |||||||| ||||||||||  ||| ||||     
T  34185 ataataacaacttgaatgatataaacaacaatatcttctatatcatacattttccacataatatatgtaactcaaattaaccaacaacatcaattatatc 34086  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    | || ||| |||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  34085 agtttagattcactgaaagactatacctttataaacaacttccattcctacccgaaagaccaactcat 34018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 92; Significance: 9e-45; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 49 - 268
Target Start/End: Original strand, 521 - 739
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagactcaccgaaagattatacctttataaac 148  Q
    |||| |||||||| ||||||||||||||||||| |||||||| |||||||||| ||||||| |||||||| |||||| |||  |   ||   ||||||||    
T  521 tctatatcatacattttccacataatatatgtagctcaaatttaccaacaacattaatcat-ttaattcaaactcactgaaccacagtataattataaac 619  T
Q  149 aacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgagg 248  Q
    ||||| ||||| || |||||||||||||||| ||||||| |||||||||||||||||||||| ||||  |||| | ||| ||||| |||| |||||||||    
T  620 aactttcattcttatcccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaaccctaaacaaggttaactgccactaagtagctcgcgagg 719  T
Q  249 agagacactctactcgctat 268  Q
     ||| |||||||||||||||    
T  720 cgagccactctactcgctat 739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 49 - 268
Target Start/End: Original strand, 8776 - 8994
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagactcaccgaaagattatacctttataaac 148  Q
    |||| |||||||| ||||||||||||||||||| |||||||| |||||||||| ||||||| |||||||| |||||| |||  |   ||   ||||||||    
T  8776 tctatatcatacattttccacataatatatgtagctcaaatttaccaacaacattaatcat-ttaattcaaactcactgaaccacagtataattataaac 8874  T
Q  149 aacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgagg 248  Q
    ||||| ||||| || |||||||||||||||| ||||||| |||||||||||||||||||||| ||||  |||| | ||| ||||| |||| |||||||||    
T  8875 aactttcattcttatcccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaaccctaaacaaggttaactgccactaagtagctcgcgagg 8974  T
Q  249 agagacactctactcgctat 268  Q
     ||| |||||||||||||||    
T  8975 cgagccactctactcgctat 8994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 178
Target Start/End: Original strand, 10934 - 11099
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatc-tctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||||| || | ||||||| | || |||||||| ||||||||||||||||||| |||||||| ||||||||||  ||| ||||     
T  10934 ataataacaacttgaatgatataaagaacaatatcatatatatcatacattttccacataatatatgtaactcaaattaaccaacaacatcaattatatc 11033  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactc 178  Q
    | || ||| |||| |||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  11034 agtttagattcacggaaaggctatacctttataaacaacttccattcctaccccaaagaccaactc 11099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 3944 - 4193
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaatt-c 117  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| | |||||||||||||||| |||||||  |||||||||||| |||||||| || |    
T  3944 aacaacttgaatgatatgaacaacaatatctctacaacatacaatattcacataatatatgtatttcaaattatccaacaacaatattcatattactttc 4043  T
Q  118 agactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagt 217  Q
     ||||||| | |||   | ||  |||||| |||||| |||||||||||||| |||||||||| |||  || | |||||||||  ||||||||||| ||      
T  4044 tgactcactgcaaggcaacacaattataagcaactttcattcctaccccaa-gaccaactcagaactacacgcgcgacaaaggacgcaagaacaccaaac 4142  T
Q  218 aaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||||||||  | | |||||||||||||||| |||  |  |||||||||||    
T  4143 aaggctgacagcgattgagtaactcgcgaggcgagctaggctactcgctat 4193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 265
Target Start/End: Original strand, 28537 - 28785
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||||| |||| || || | |||  |||||||| |||| ||||||||||||||| ||| ||| |||||||||| ||||||| ||    
T  28537 ataataacaacttgaatgatat-aacaacattagtttctgtatcatacattttc-acataatatatgtatttcacattaaccaacaacattaatcatttt 28634  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactca-taacatcatgtgcgacaaagatcgcaagaaca 211  Q
    |||| ||| || | |||||  || ||||||||||||||||||||||||||||||||||||||||||| |  |||||  ||||| |||||||||||||||     
T  28635 aatttaga-tctctgaaaggctaaacctttataaacaacttccattcctaccccaaagaccaactcattgtcatca--tgcgataaagatcgcaagaacc 28731  T
Q  212 ctaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgc 265  Q
    ||||  |||| ||||| ||||| |||| ||| | | | ||| ||||||||||||    
T  28732 ctaaacaaggttgactgccactaagtagctcacaaagcgagccactctactcgc 28785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 248 - 83
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    |||||||||||| ||||||||| |||||| |||||| |||||||||||||||||||| |||||| | || ||  |||||||||||| |||||||||||||    
T  248 aacaacttgaataatatgaacaacaatatttctacaacatacaatttccacataatagatgtatttaaatttatccaacaacaatattcatattaattca 149  T
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataaca 184  Q
    ||||||| | ||||  ||||  ||||| |||| || |  |||||||||||||||||||||| ||||    
T  148 gactcactgtaagacaatacaattatatacaattttcgatcctaccccaaagaccaactcaaaaca 83  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 30409 - 30530
Alignment:
Q  147 acaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcga 246  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||  |||| || || ||| |||| |||||||||    
T  30409 acaacttccattcctaccccaaagaccaactcacaacatcacgtgcgacaaagatcgcaagaaccctaaacaaggttgtctgccaatgagcaactcgcga 30508  T
Q  247 ggagagacactctactcgctat 268  Q
    || ||| |||||||||||||||    
T  30509 ggcgagccactctactcgctat 30530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 368 - 535
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    ||||||||||||||||||| || |||| | |||| | ||| |||||||| |||||||||||||||| || || ||||| ||||||||||  ||| |||||    
T  368 ataataacaacttgaatgaaataaacaacgatattttctatatcatacattttccacataatatatatagcttaaattaaccaacaacatcaattatatt 467  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    | || ||| | || |||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  468 agtttagattaactgaaaggctatacctttataaacaacttccattcctacccctaagaccaactcat 535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 6878 - 7045
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    ||||||||||||  |||||||| |||| |||||| | ||| |||||||| ||||||||||||||||||| || ||||| ||||||||||  ||| |||||    
T  6878 ataataacaactcaaatgatataaacaacaatattttctatatcatacattttccacataatatatgtagcttaaattaaccaacaacatcaattatatt 6977  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    |  | | | |||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  6978 agcttaaattcactgaaaggctatacctttataaacaacttccattcctaccccaaggaccaactcat 7045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 830 - 960
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    ||||||||||||||||| ||||  ||||| |||| |||||||||| | ||||||||||||||||||||||||   ||||||||||| |||||||||||||    
T  830 aacaacttgaatgatataaacaataatatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaatattcatattaattca 929  T
Q  119 gactcaccgaaagattatacctttataaaca 149  Q
    ||||||| ||||||  |||| ||||||||||    
T  930 gactcactgaaagacaatacatttataaaca 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 1020 - 1100
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||||| |||| ||  | |||||||||||||||| |||||||  |||||||    
T  1020 aacaacttgaatgatatgaacaacaatatttctacaacatataacattcacataatatatgtatttcaaattatccaacaa 1100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 187438 - 187308
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    ||||||||||||||||| ||||  ||||| |||| |||||||||| | ||||||||||||||||||||||||   ||||||||||| |||||||||||||    
T  187438 aacaacttgaatgatataaacaataatatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaatattcatattaattca 187339  T
Q  119 gactcaccgaaagattatacctttataaaca 149  Q
    ||||||| ||||||  |||| ||||||||||    
T  187338 gactcactgaaagacaatacatttataaaca 187308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 187248 - 187168
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||||| |||| ||  | |||||||||||||||| |||||||  |||||||    
T  187248 aacaacttgaatgatatgaacaacaatatttctacaacatataacattcacataatatatgtatttcaaattatccaacaa 187168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 14009 - 13958
Alignment:
Q  155 cattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||||||||||||| || ||||||||||||||  ||||||||| ||||||||    
T  14009 cattcctaccccaaggatcaactcataacatctcgtgcgacaaggatcgcaa 13958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 3295 - 3460
Alignment:
Q  16 aataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaa 114  Q
    |||||||||||||||| ||| |||| | |||| | ||| |||||||| ||||||||||||||||||| || ||||| |||||||||   ||| |||||||    
T  3295 aataacaacttgaatgttataaacaacgatattttctatatcatacattttccacataatatatgtagcttaaattaaccaacaacgtcaattatattaa 3394  T
Q  115 ttcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    || ||| ||||  ||||  |||||||||||||||||||| |||||||||||||| |||||||||||    
T  3395 tttagattcactaaaaggctatacctttataaacaactttcattcctaccccaacgaccaactcat 3460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 16862 - 16978
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatta 113  Q
    |||| |||||||| |||||||||||||  ||||| |||| |||| ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||    
T  16862 ataacaacaacttaaatgatatgaacaagaatatttctatatcaaacaattttcacataatatatgtatctcaaattatccaacaacaataatcatatta 16961  T
Q  114 attcagactcaccgaaa 130  Q
    |||| ||||||| ||||    
T  16962 attccgactcactgaaa 16978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 92 - 264
Target Start/End: Complemental strand, 11541 - 11369
Alignment:
Q  92 accaacaacaataatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtg 191  Q
    |||||||||| ||||||| ||||||||||||| | |||  |  |||   ||||||||||||| |||| |||||||||||||||||||||||||||  |||    
T  11541 accaacaacattaatcatcttaattcagactctctgaacaacaataatattataaacaactttcatttctaccccaaagaccaactcataacatctcgtg 11442  T
Q  192 cgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcg 264  Q
    ||||||| ||||||||||  ||||  |||| || || |||||||||| ||||||||| ||| |||||||||||    
T  11441 cgacaaatatcgcaagaatcctaaacaaggttgtctgccactgagtagctcgcgaggcgagccactctactcg 11369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 95674 - 95798
Alignment:
Q  144 taaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcg 243  Q
    ||||||||||  ||||||| |||||||||||||||||||  ||| ||||||||| |||||||||||| ||||  |||| ||||| |||||||||||||||    
T  95674 taaacaactttgattcctatcccaaagaccaactcataagctcacgtgcgacaatgatcgcaagaaccctaaacaaggttgactgccactgagtaactcg 95773  T
Q  244 cgaggagagacactctactcgctat 268  Q
    ||||| ||| |||||||||||||||    
T  95774 cgaggcgagccactctactcgctat 95798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 6164 - 6331
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    ||||||| |||||||||||||| |||| ||||| | |||| |||||||| ||||||||||| |||| || || ||||| ||||||||||  ||| |||||    
T  6164 ataataataacttgaatgatataaacaacaatactttctatatcatacattttccacataaaatatatagcttaaattaaccaacaacatcaattatatt 6263  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    |  | ||| |||| || ||  ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  6264 agcttagattcactgagaggctatacctttataaacaacttccattccaaccccaaggaccaactcat 6331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 8316 - 8483
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    ||||||| |||||||||||||| |||| ||||| | |||| |||||||| ||||||||||| |||| || || ||||| ||||||||||  ||| |||||    
T  8316 ataataataacttgaatgatataaacaacaatactttctatatcatacattttccacataaaatatatagcttaaattaaccaacaacatcaattatatt 8415  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    |  | ||| |||| || ||  ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  8416 agcttagattcactgagaggctatacctttataaacaacttccattccaaccccaaggaccaactcat 8483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 7606 - 7736
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    ||||| |||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||| ||||   ||||||||| | |||||||||||||    
T  7606 aacaatttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcgaattattcaacaacaacattcatattaattca 7705  T
Q  119 gactcaccgaaagattatacctttataaaca 149  Q
    ||||||| ||||||  ||||  |||||||||    
T  7706 gactcactgaaagacaatacaattataaaca 7736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 7800 - 7868
Alignment:
Q  22 aacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||||||||||||||| |||||| |||| |||||||||| | || ||||||||||||| |||||||    
T  7800 aacttgaatgatatgaacaacaatatttctatatcatacaatattcaaataatatatgtatatcaaatt 7868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 41019 - 40852
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||||| |||| | ||| | |||| |||||||| ||||||||||| |||| || || ||||| ||||||||||  ||| |||||    
T  41019 ataataacaacttgaatgatataaacaacgatactttctatatcatacattttccacataaaatatatagcttaaattaaccaacaacatcaattatatt 40920  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    | || | | | || || ||  ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  40919 agtttatattgactgagaggctatacttttataaacaacttccattcctaccccaaggaccaactcat 40852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 12802 - 12676
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaac 240  Q
    ||||||||||||  |||||||||||||| |||||||||||||| ||  ||||||||||||| |||||||| ||||  ||||  | |||||||||  ||||    
T  12802 ttataaacaactctcattcctaccccaaggaccaactcataacctctcgtgcgacaaagatagcaagaaccctaaacaaggtagtctaccactgtataac 12703  T
Q  241 tcgcgaggagagacactctactcgcta 267  Q
    |||||||| ||| ||||||||||||||    
T  12702 tcgcgaggcgagccactctactcgcta 12676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 4064 - 4125
Alignment:
Q  119 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  4064 gactcactgaaaggctatacctttataaacaacttccattcctaccccaaggaccaactcat 4125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 134 - 268
Target Start/End: Complemental strand, 675 - 542
Alignment:
Q  134 tatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccact 233  Q
    |||| ||| ||||| ||||| |||||||| ||||| || ||||||| ||| ||| |||||||||||||||||||||| ||||  |||| ||||| |||||    
T  675 tataacttaataaataactttcattcctatcccaa-gatcaactcacaacttcacgtgcgacaaagatcgcaagaaccctaaacaaggttgactgccact 577  T
Q  234 gagtaactcgcgaggagagacactctactcgctat 268  Q
    ||||| ||||||||| ||| |||||||||||||||    
T  576 gagtagctcgcgaggcgagccactctactcgctat 542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 142 - 268
Target Start/End: Original strand, 17721 - 17847
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaact 241  Q
    ||||| |||| |||||||||||||||| || ||||||||||||||  |||||||||||||||||||||| ||||  ||||||| ||  ||||| | | ||    
T  17721 tataatcaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaagaactctaaacaaggctgcctgacactgtgcagct 17820  T
Q  242 cgcgaggagagacactctactcgctat 268  Q
    ||||||| ||| |||||||||||||||    
T  17821 cgcgaggcgagccactctactcgctat 17847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 59; Significance: 5e-25; HSPs: 4)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 1654 - 1760
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    ||||| |||||||||||||||| |||||| |||| |||||||||| | |||||| |||||||||||||||||   ||||||||| | |||||||||||||    
T  1654 aacaatttgaatgatatgaacaacaatatttctatatcatacaatattcacatagtatatgtatctcaaattattcaacaacaacattcatattaattca 1753  T
Q  119 gactcac 125  Q
    |||||||    
T  1754 gactcac 1760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 4807 - 4938
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattca 118  Q
    ||||| || |||||||| |||| |||||| | || || ||||||| | |||||||||||||||||||||||| | ||||||||| | |||||||||||||    
T  4807 aacaatttaaatgatataaacaacaatatttatatattatacaatattcacataatatatgtatctcaaattaatcaacaacaacattcatattaattca 4906  T
Q  119 gactcaccgaaagattatacctttataaacaa 150  Q
    ||||||| ||||||  ||||  ||||||||||    
T  4907 gactcactgaaagacaatacaattataaacaa 4938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 5000 - 5068
Alignment:
Q  22 aacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||    
T  5000 aacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaatt 5068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 1847 - 1915
Alignment:
Q  22 aacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||||||||||||||| |||||| |||| |||||||||| | |||| |||||||||||||||||||    
T  1847 aacttgaatgatatgaacaacaatatttctatatcatacaatattcacacaatatatgtatctcaaatt 1915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 2072 - 1903
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtat--ctcaaattgaccaacaacaataatcata 110  Q
    |||||||||||||||||||||  |||| | |||| | |||  ||||||| |||||||||| |||||  ||  || || || ||||||||||  ||| |||    
T  2072 ataataacaacttgaatgataataacaacgatattttctatctcatacattttccacatattatataaatagcttaagttaaccaacaacatcaattata 1973  T
Q  111 ttaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||| || ||| |||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  1972 ttagtttagattcactgaaaggctatacctttataaacaacttccattcctaccccaaagaccaactcat 1903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 762 - 820
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| || |||||||||| |||  |||| |||||||||||||    
T  762 caacctccattcctaccccaaggatcaactcataaaatctcgtgcaacaaagatcgcaa 820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 2782 - 2617
Alignment:
Q  16 aataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaa 114  Q
    |||||||||||||||||||| ||||   |||| | ||| |||||||| |||||||||||||||| || || ||||| ||||| ||||  ||  ||||||     
T  2782 aataacaacttgaatgatataaacaatgatattttctatatcatacattttccacataatatatatagcttaaatttaccaagaacatcaaatatattag 2683  T
Q  115 ttcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
     | ||| |||| ||| | ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  2682 cttagattcactgaatggttatacctttataaacaacatccattcctaccccaaggaccaactcat 2617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 262
Target Start/End: Original strand, 19006 - 19219
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattcagactcaccgaaagattatacctttataaac 148  Q
    |||||| |||||||| ||||||||||||| | || |||| ||  ||||| |||||| ||||||||||||||  ||||   || |   ||| ||||||  |    
T  19006 tctacaacatacaatatccacataatatacgcatttcaatttatccaaccacaatattcatattaattcaggttcactataaaacagtacatttatatgc 19105  T
Q  149 aacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgagg 248  Q
    |||||  |||||||||||||||||||||||| |||  || |||||| ||||| ||||||||| | || || |||||||| |||||||  |||||||||||    
T  19106 aactttgattcctaccccaaagaccaactcagaacgacacgtgcgaaaaagaacgcaagaacgcgaaatagggctgactgccactgaacaactcgcgagg 19205  T
Q  249 agagacactctact 262  Q
     ||| |||||||||    
T  19206 cgagccactctact 19219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 5082 - 5246
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    ||||||| |||||||||||||| |||| ||||| | |||| |||||||| ||||||||||| |||| || || ||||| |||||||||   ||| |||||    
T  5082 ataataataacttgaatgatataaacaacaatactttctatatcatacattttccacataaaatatatagcttaaattaaccaacaacgtcaattatatt 5181  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaact 177  Q
    |  | ||| ||||  | ||  ||||||||||||||||||||||||||||||||||| ||||||||    
T  5182 agcttagattcactaagaggctatacctttataaacaacttccattcctaccccaaggaccaact 5246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 268
Target Start/End: Original strand, 3105 - 3225
Alignment:
Q  146 aacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcg 245  Q
    ||||||||||||| ||| ||||| | | |||||| |||||||||||||||||||||||||||||| ||||  |||| ||||| |||||| || |||||||    
T  3105 aacaacttccatttctatcccaaggtc-aactcacaacatcatgtgcgacaaagatcgcaagaaccctaaacaaggttgactgccactgggt-actcgcg 3202  T
Q  246 aggagagacactctactcgctat 268  Q
    ||| ||| |||||||||||||||    
T  3203 aggtgagccactctactcgctat 3225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 55586 - 55522
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| |||| |||||||||||||||| |  ||||||||||||||  ||||||||||||||||||    
T  55586 tataatcaacctccattcctaccccaagggtcaactcataacatctcgtgcgacaaagatcgcaa 55522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 33615 - 33690
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||||||| ||||| ||| ||| |||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  33615 ataataaccacttggatggtat-aacaacattatttctatatcatacaatattcacataatatatgtatctcaaatt 33690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 1210 - 1130
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||  |||||||    
T  1210 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 1130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 15329 - 15249
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||  |||||||    
T  15329 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 15249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 24387 - 24307
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||  |||||||    
T  24387 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 24307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 3136 - 3303
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatct-ctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||| ||||||||||||||||| |||| | | || | ||| |||||||| ||||| |||||||||| || || ||||| ||||||| ||  ||| |||||    
T  3136 ataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccccataatatatatagcttaaattaaccaacatcatcaattatatt 3235  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    |  | ||| |||| ||||   ||||||||||||| ||||||||||||||||||||| |||||||||||    
T  3236 agcttagattcactgaaaagctatacctttataatcaacttccattcctaccccaaggaccaactcat 3303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 9980 - 9922
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| || ||||||||||||||  ||||||||||||||||||    
T  9980 caacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaa 9922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 268
Target Start/End: Original strand, 1216 - 1391
Alignment:
Q  92 accaacaacaataatcatattaattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtg 191  Q
    |||||||||| ||||||| ||||||||||||| | |||  |  |||   || | |||||||| |||||||||||||| |||||||||||||||||  ||     
T  1216 accaacaacattaatcatcttaattcagactctctgaacaacaataatattttgaacaactttcattcctaccccaaggaccaactcataacatctcgta 1315  T
Q  192 cgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||||| |||||||||||| ||||  |||| || ||  ||||||||| |||||||||  || |||||| ||||||||    
T  1316 cgacaacgatcgcaagaaccctaa-caaggttgtctgtcactgagtagctcgcgaggctagtcactctgctcgctat 1391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 3728 - 3808
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| | |||||||||||||||| |||||||  |||||||    
T  3728 aacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatttcaaattatccaacaa 3808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 431 - 264
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatatt 112  Q
    |||||||||||||||||||||| |||| | ||| | |||| |||||||| ||| ||||||| |||| || || ||||| ||||||||||  ||| |||||    
T  431 ataataacaacttgaatgatataaacaacgatactttctatatcatacatttttcacataaaatatatagcttaaattaaccaacaacatcaattatatt 332  T
Q  113 aattcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 180  Q
    | || | | | || || ||  ||||| ||||||||||||||||||||||| || || |||||||||||    
T  331 agtttatattgactgagaggctatacttttataaacaacttccattcctatcctaaggaccaactcat 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 8398 - 8525
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaac 240  Q
    |||||| |||| |||||||||||||||  || ||||||| | ||||  |||||||||||||||||||||| ||||  |||| || ||  ||||| | |||    
T  8398 ttataagcaacctccattcctaccccacggatcaactcacatcatctcgtgcgacaaagatcgcaagaaccctaaacaaggatgtctgacactgtgcaac 8497  T
Q  241 tcgcgaggagagacactctactcgctat 268  Q
    |||||||| ||| |||||||||||||||    
T  8498 tcgcgaggcgaggcactctactcgctat 8525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 265
Target Start/End: Original strand, 3649 - 3781
Alignment:
Q  134 tatacctttataaacaacttccattcctacccca-aagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccac 232  Q
    |||| ||| ||||||||||| |||||||| | |  |||| ||||||| ||||||| ||||||||||||| |||||||  ||||  |||| ||||| ||||    
T  3649 tataacttaataaacaactttcattcctatcgcgcaagatcaactcacaacatcacgtgcgacaaagattgcaagaatcctaaacaaggttgactgccac 3748  T
Q  233 tgagtaactcgcgaggagagacactctactcgc 265  Q
    |||||| ||||||||| ||| ||| ||||||||    
T  3749 tgagtagctcgcgaggcgagccacactactcgc 3781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 268
Target Start/End: Complemental strand, 18069 - 17943
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaact 241  Q
    ||||| |||| |||||||||||||||| || ||||||||||||||  | |||||||||||||||  ||| ||||  |||| || ||  ||||| | | ||    
T  18069 tataatcaacctccattcctaccccaaggatcaactcataacatctcgggcgacaaagatcgcagaaaccctaaacaaggttgtctgacactgtgcagct 17970  T
Q  242 cgcgaggagagacactctactcgctat 268  Q
    ||||||| ||| |||||||||||||||    
T  17969 cgcgaggcgaggcactctactcgctat 17943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 268
Target Start/End: Original strand, 3395 - 3521
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaact 241  Q
    ||||| |||| ||||||||||||| || || ||||||||||||||  | |||||||||||||||| ||| ||||  ||||||| ||  ||||| | | ||    
T  3395 tataatcaacctccattcctaccctaaggatcaactcataacatctcgggcgacaaagatcgcaaaaaccctaaacaaggctgtctgacactgtgcagct 3494  T
Q  242 cgcgaggagagacactctactcgctat 268  Q
    ||||||| ||| |||||||||| ||||    
T  3495 cgcgaggcgaggcactctactcactat 3521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 34538 - 34619
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaac 100  Q
    |||||||||||||||||||| | |||||| |||| |||||| ||| | ||||||||| ||||||||||||||  ||||||||    
T  34538 aacaacttgaatgatatgaataacaatatttctatatcataaaatattcacataatacatgtatctcaaattatccaacaac 34619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 39408 - 39488
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    ||||||||||||||||||||||||||||| |||||| ||| |||  | || ||||||||||||| |||||||  |||||||    
T  39408 aacaacttgaatgatatgaacatcaatatttctacaacattcaacattcatataatatatgtatttcaaattatccaacaa 39488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 268
Target Start/End: Original strand, 22462 - 22590
Alignment:
Q  140 tttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaa 239  Q
    ||||||| |||| | |||||||||||||| || || |||||||||||  |||||||||||||||| ||||||||||  || | || ||  || || | |     
T  22462 tttataaccaaccttcattcctaccccaaggatcagctcataacatctcgtgcgacaaagatcgctagaacactaaacaatgttgtctgtcattgtgcag 22561  T
Q  240 ctcgcgaggagagacactctactcgctat 268  Q
    ||||||||| ||| |||||||||||||||    
T  22562 ctcgcgaggtgagccactctactcgctat 22590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 11362 - 11437
Alignment:
Q  140 tttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaa 215  Q
    ||||||| |||| | |||||||||||||| || || |||||||||||  |||||||||||||||| ||||||||||    
T  11362 tttataaccaaccttcattcctaccccaaggatcagctcataacatctcgtgcgacaaagatcgctagaacactaa 11437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 145998 - 146085
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaacaa 102  Q
    |||||||| ||||| ||||||| |||| || ||| |||| |||||||||| | |||||||||||||||||||||||| | |||||||||    
T  145998 ataataaccacttggatgatat-aacaacattatttctatatcatacaatattcacataatatatgtatctcaaattaatcaacaacaa 146085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 25825 - 25905
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||| ||||||||||||||||| |||||| |||||| |||||||  | |||||||||||||||| |||||||  |||||||    
T  25825 aacagcttgaatgatatgaacaacaatatttctacaacatacaacattcacataatatatgtatttcaaattatccaacaa 25905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 268
Target Start/End: Complemental strand, 4516 - 4394
Alignment:
Q  146 aacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccactgagtaactcgcg 245  Q
    |||||||  |||||||||||||| |||||||| |||||    ||||||||||||||||||||||| | ||  |||| || ||  ||||| | | ||||||    
T  4516 aacaactctcattcctaccccaaggaccaactgataactctttgtgcgacaaagatcgcaagaacccaaaacaaggttgtctgacactgtgcagctcgcg 4417  T
Q  246 aggagagacactctactcgctat 268  Q
    ||| ||| |||||||||||||||    
T  4416 aggcgagccactctactcgctat 4394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 14514 - 14441
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcat-gtgcgacaaagatcgcaagaacactaa 215  Q
    |||||||||||  |||||||||||||| |||||||||||||| || | |||||||||||||||||||||| ||||    
T  14514 tataaacaactctcattcctaccccaaggaccaactcataac-tcttcgtgcgacaaagatcgcaagaaccctaa 14441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 24493 - 24435
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| || ||||||||||||||  ||||||||||||||||||    
T  24493 caacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaa 24435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2080 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold2080
Description:

Target: scaffold2080; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 663 - 598
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||||| |||| |||||||||||||||| || ||||||||||| ||| |||||||||| |||||||    
T  663 ttataatcaacctccattcctaccccaaggatcaactcataacctcacgtgcgacaaaaatcgcaa 598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 179
Target Start/End: Complemental strand, 134 - 8
Alignment:
Q  57 atacaatttccacataatatatgtatctcaaattgaccaacaacaataatcatattaattc----agactcaccgaaagattatacctttataaacaact 152  Q
    ||||| ||||||||||||||||||| ||  |||| ||||||||||  ||| |||||||||     ||| ||   |||||  |||||||||||||||||||    
T  134 atacattttccacataatatatgtagcttgaattaaccaacaacatcaattatattaattagcttagattccttgaaaggctatacctttataaacaact 35  T
Q  153 tccattcctaccccaaagaccaactca 179  Q
     |||||| ||||||||| |||||||||    
T  34 cccattcttaccccaaaaaccaactca 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 29325 - 29261
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| |||| |||||||||||||||| |  ||||||||||||||  ||||||||||||||||||    
T  29325 tataatcaacctccattcctaccccaagggtcaactcataacatctcgtgcgacaaagatcgcaa 29261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 19548 - 19484
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    ||||| |||| |||||||||||||||| ||  |||||||||||||  ||||||||||||||||||    
T  19548 tataatcaacctccattcctaccccaatgattaactcataacatctcgtgcgacaaagatcgcaa 19484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 168746 - 168826
Alignment:
Q  19 aacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaattgaccaacaa 99  Q
    |||||||||||| ||||||||| |||||| || | |||||||||| |  ||||||||||||||| |||||||  |||||||    
T  168746 aacaacttgaataatatgaacaacaatatttcaatatcatacaatattaacataatatatgtatttcaaattatccaacaa 168826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 14538 - 14593
Alignment:
Q  155 cattcctaccccaaagaccaactcataacatcatgtgcgac-aaagatcgcaagaa 209  Q
    ||||||||||| || || ||||||||||||||||||||||| ||||||||||||||    
T  14538 cattcctaccctaaggatcaactcataacatcatgtgcgacaaaagatcgcaagaa 14593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 268
Target Start/End: Complemental strand, 53309 - 53176
Alignment:
Q  133 ttatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaaggctgactaccac 232  Q
    ||||| ||| ||||||||||| |||||||| ||| | || ||||||| ||||||| ||  ||||||||| |||||||| ||||  |||| ||||| |||     
T  53309 ttataacttgataaacaactttcattcctatccc-aggatcaactcacaacatcacgtttgacaaagattgcaagaaccctaaacaagg-tgactgccat 53212  T
Q  233 tgagtaactcgcgaggagagacactctactcgctat 268  Q
    |||||| |||||| || ||| |||||||||| ||||    
T  53211 tgagtagctcgcgtggcgagccactctactcactat 53176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 3223 - 3165
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| || ||||||||||||||  ||||||||||||| ||||    
T  3223 caacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagattgcaa 3165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 2322 - 2265
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| ||||||||||||||||| | |||||||||||| ||||    
T  2322 caacctccattcctaccccaaggaccaactcataacatc-tctgcgacaaagattgcaa 2265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 10369 - 10443
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaa 215  Q
    |||||| |||| || |||||||| |||| || ||||||||||| ||| |||||||||||||| ||||||| ||||    
T  10369 ttataatcaacctctattcctacaccaaggatcaactcataacctcacgtgcgacaaagatcacaagaaccctaa 10443  T

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Target: scaffold0356 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 557 - 499
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| || |||||| |||||||  ||||||||||||||||||    
T  557 caacctccattcctaccccaaggatcaactcgtaacatctcgtgcgacaaagatcgcaa 499  T

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Target: scaffold0260 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 8352 - 8410
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| ||  |||||||||||||  ||||||||||||||||||    
T  8352 caacctccattcctaccccaaggattaactcataacatctcgtgcgacaaagatcgcaa 8410  T

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Target: scaffold0220 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 17791 - 17860
Alignment:
Q  134 tatacctttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgc 204  Q
    |||| ||||||||||||||||||||||||  || |||| ||||||| ||||||| ||||||| ||||||||    
T  17791 tataactttataaacaacttccattcctatgcc-aagatcaactcacaacatcacgtgcgacgaagatcgc 17860  T

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Target: scaffold0081 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 4592 - 4538
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatc 202  Q
    |||| |||||||||||||||| || ||||||||||||||  ||||||||||||||    
T  4592 caacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatc 4538  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 85770 - 85828
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||| |||||||||||||||| || |||||| |||||||  ||||||||||||||||||    
T  85770 caacctccattcctaccccaaggatcaactcgtaacatctcgtgcgacaaagatcgcaa 85828  T

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Target: scaffold0750 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 3813 - 3878
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||||| |||| |||||||||||| ||| || ||||||||||||||  ||| ||||||||||||||    
T  3813 ttataatcaacctccattcctacctcaaggatcaactcataacatctcgtgtgacaaagatcgcaa 3878  T

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Target: scaffold0575 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 6054 - 5998
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  6054 atgaacaacattatgtctatatcatacaatattcacataatatatgtatctcaaatt 5998  T

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Target: scaffold0292 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 6837 - 6893
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  6837 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaatt 6893  T

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Target: scaffold0146 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 22323 - 22398
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||||||| ||||| ||| ||| |||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  22323 ataataaccacttggatggtat-aacaacattatttctatatcatacaatattcacataatatatgtatctcaaatt 22398  T

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Target: scaffold0054 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 75731 - 75651
Alignment:
Q  141 ttataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaagtaagg 221  Q
    |||||| |||| | |||||||||||||| || |||||||||||||   |||||||||  ||||||||||| |||| |||||    
T  75731 ttataaccaaccttcattcctaccccaaggatcaactcataacatatcgtgcgacaagaatcgcaagaaccctaaataagg 75651  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 116637 - 116673
Alignment:
Q  144 taaacaacttccattcctaccccaaagaccaactcat 180  Q
    ||||||||| |||||||||||||||||||||||||||    
T  116637 taaacaactaccattcctaccccaaagaccaactcat 116673  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 20976 - 21032
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  20976 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaatt 21032  T

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Target: scaffold0047 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 22510 - 22561
Alignment:
Q  155 cattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaa 206  Q
    |||||||||||||| || ||||||||||||||  ||||||||| ||||||||    
T  22510 cattcctaccccaaggatcaactcataacatctcgtgcgacaaggatcgcaa 22561  T

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Target: scaffold0047; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 78327 - 78402
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||||||| ||||| ||| ||| |||| || ||| |||| | |||||||| | ||||||||||||||||||||||||    
T  78327 ataataaccacttggatggtat-aacaacattatttctataccatacaatattcacataatatatgtatctcaaatt 78402  T

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Target: scaffold0039 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 10692 - 10641
Alignment:
Q  39 catcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||| ||| |||| |||||||||| | ||||||||||||||||||||||||    
T  10692 catcattatttctatatcatacaatattcacataatatatgtatctcaaatt 10641  T

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Target: scaffold0357 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 2919 - 2973
Alignment:
Q  148 caacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatc 202  Q
    |||| |||||||||||||||| || ||| ||||||||||  ||||||||||||||    
T  2919 caacctccattcctaccccaaggatcaattcataacatctcgtgcgacaaagatc 2973  T

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Target: scaffold1633 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 507 - 548
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||| |||||||||| | ||||||||||||||||||||||||    
T  507 tctatatcatacaatattcacataatatatgtatctcaaatt 548  T

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Target: scaffold0232 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 3609 - 3650
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||| |||||||||| | ||||||||||||||||||||||||    
T  3609 tctatatcatacaatattcacataatatatgtatctcaaatt 3650  T

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Target: scaffold0207 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 15262 - 15221
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||| |||||||||| | ||||||||||||||||||||||||    
T  15262 tctatatcatacaatattcacataatatatgtatctcaaatt 15221  T

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Target: scaffold0205 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 29909 - 29950
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||| |||||||||| | ||||||||||||||||||||||||    
T  29909 tctatatcatacaatattcacataatatatgtatctcaaatt 29950  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 29457 - 29498
Alignment:
Q  49 tctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    |||| |||||||||| | ||||||||||||||||||||||||    
T  29457 tctatatcatacaatattcacataatatatgtatctcaaatt 29498  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 221109 - 221036
Alignment:
Q  142 tataaacaacttccattcctaccccaaagaccaactcataacatcatgtgcgacaaagatcgcaagaacactaa 215  Q
    ||||| |||| || |||||||||| || |  ||||||| ||| |||||||||||||| ||||||||||| ||||    
T  221109 tataatcaacctctattcctacccgaagggtcaactcaaaacctcatgtgcgacaaaaatcgcaagaaccctaa 221036  T

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Target: scaffold0607 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 2964 - 3028
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatata 77  Q
    |||||||||||||||||||||| |||| | ||| | |||| |||||||| ||||| |||||||||    
T  2964 ataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataatata 3028  T

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Target: scaffold0096 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 21392 - 21448
Alignment:
Q  34 atgaacatcaatatctctacatcatacaatttccacataatatatgtatctcaaatt 90  Q
    ||||||| || ||| |||| |||||| ||| | ||||||||||||||||||||||||    
T  21392 atgaacaacattatttctatatcataaaatattcacataatatatgtatctcaaatt 21448  T

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Target: scaffold0070 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 8315 - 8379
Alignment:
Q  14 ataataacaacttgaatgatatgaacatcaata-tctctacatcatacaatttccacataatata 77  Q
    |||||||||||||||||||||  |||| | ||| | |||| |||||||| |||||||||||||||    
T  8315 ataataacaacttgaatgataataacaacgatattttctatatcatacattttccacataatata 8379  T

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