View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10461_low_24 (Length: 247)

Name: NF10461_low_24
Description: NF10461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10461_low_24
NF10461_low_24
[»] chr5 (10 HSPs)
chr5 (1-238)||(36227558-36227797)
chr5 (7-76)||(16458053-16458121)
chr5 (8-77)||(29925767-29925836)
chr5 (10-90)||(42500302-42500382)
chr5 (17-76)||(15015778-15015837)
chr5 (31-74)||(25461744-25461787)
chr5 (7-57)||(14932236-14932285)
chr5 (28-77)||(7999132-7999181)
chr5 (31-76)||(25461019-25461064)
chr5 (6-66)||(35445992-35446052)
[»] chr3 (11 HSPs)
chr3 (7-75)||(12862322-12862389)
chr3 (12-76)||(51929439-51929504)
chr3 (12-76)||(35696187-35696251)
chr3 (7-74)||(30956700-30956767)
chr3 (7-74)||(30972512-30972579)
chr3 (28-77)||(1508675-1508725)
chr3 (17-75)||(5331222-5331279)
chr3 (7-77)||(20170449-20170519)
chr3 (30-76)||(20880404-20880450)
chr3 (17-75)||(29520563-29520620)
chr3 (17-73)||(29520415-29520470)
[»] chr4 (12 HSPs)
chr4 (12-75)||(43505884-43505947)
chr4 (7-76)||(31076460-31076529)
chr4 (7-75)||(54069491-54069559)
chr4 (30-77)||(33587051-33587098)
chr4 (8-74)||(25904285-25904351)
chr4 (12-77)||(403453-403518)
chr4 (9-90)||(42404074-42404155)
chr4 (17-73)||(15177286-15177342)
chr4 (7-75)||(41336689-41336756)
chr4 (10-62)||(44797827-44797879)
chr4 (7-75)||(45935294-45935362)
chr4 (17-90)||(54425958-54426031)
[»] chr6 (3 HSPs)
chr6 (12-76)||(30536637-30536701)
chr6 (7-76)||(30536405-30536474)
chr6 (28-75)||(18076124-18076171)
[»] chr2 (8 HSPs)
chr2 (6-77)||(32592513-32592583)
chr2 (7-53)||(1875076-1875122)
chr2 (7-53)||(42420368-42420414)
chr2 (28-76)||(15305584-15305632)
chr2 (28-75)||(20933683-20933730)
chr2 (17-75)||(26201956-26202015)
chr2 (6-75)||(23974565-23974632)
chr2 (7-49)||(24100880-24100922)
[»] chr1 (11 HSPs)
chr1 (9-68)||(45661185-45661244)
chr1 (7-76)||(42391293-42391361)
chr1 (7-53)||(45145176-45145222)
chr1 (45-90)||(32491466-32491511)
chr1 (8-76)||(14385838-14385906)
chr1 (6-77)||(18556853-18556923)
chr1 (7-53)||(41184724-41184770)
chr1 (30-75)||(37473327-37473372)
chr1 (31-76)||(42174784-42174829)
chr1 (30-75)||(44932029-44932074)
chr1 (7-63)||(5063403-5063459)
[»] chr8 (11 HSPs)
chr8 (7-77)||(35644055-35644125)
chr8 (11-75)||(14956373-14956437)
chr8 (28-76)||(32975987-32976035)
chr8 (7-74)||(12497305-12497372)
chr8 (28-77)||(38353276-38353324)
chr8 (18-68)||(6525753-6525803)
chr8 (28-77)||(1058169-1058218)
chr8 (9-53)||(16736034-16736078)
chr8 (10-90)||(16825614-16825694)
chr8 (7-90)||(25930628-25930712)
chr8 (28-76)||(29168147-29168195)
[»] chr7 (14 HSPs)
chr7 (28-77)||(48140142-48140191)
chr7 (17-69)||(45806410-45806462)
chr7 (7-74)||(420289-420356)
chr7 (7-70)||(31247602-31247665)
chr7 (12-75)||(45806556-45806619)
chr7 (9-76)||(20234408-20234477)
chr7 (33-75)||(21568728-21568770)
chr7 (30-71)||(31247666-31247707)
chr7 (11-75)||(31744237-31744301)
chr7 (28-75)||(23989579-23989626)
chr7 (28-74)||(4970883-4970929)
chr7 (7-77)||(46078073-46078143)
chr7 (28-69)||(45004700-45004741)
chr7 (29-77)||(9210554-9210602)


Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 36227797 - 36227558
Alignment:
Q  1 atattgtatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagcggctgtgctataagttgatgatcc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36227797 atattgtatacaaaatcaatttaacgctattttatcttttgctataaaaatagattaagcaagcttatacataagcggctgtgctataagttgatgatcc 36227698  T
Q  101 aaacactcccttaatgcttgtaatggttaagattct--tgtttattgttctcgtcaaattctttatatttagaaaaatgagatgattatcatgaacttct 198  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36227697 aaacactcccttaatgcttgtaatggttaagattattgtgtttattgttctcgtcaaattctttatatttagaaaaatgagatgattatcatgaacttct 36227598  T
Q  199 aaattgatgatctgcttattcatgtgagtgatgtccatct 238  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  36227597 aaattgatgatctgcttattcatgtgagtgatgttcatct 36227558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 16458053 - 16458121
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagc 76  Q
    ||||||||| |||||||| | |||||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  16458053 tatacaaaaacaatttaa-gttattttatcttttgctataaaaatagcttatgcaagcttatatataagc 16458121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 29925836 - 29925767
Alignment:
Q  8 atacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagcg 77  Q
    ||||| || |||||||| |||||||||||||||||||||||||||| ||| |||||| ||||| ||||||    
T  29925836 atacagaaacaatttaacgctattttatcttttgctataaaaatagcttatgcaagcatatacttaagcg 29925767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 42500302 - 42500382
Alignment:
Q  10 acaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagcggctgtgctataag 90  Q
    |||||| ||||||||   |||||||||||||| ||||||||||| ||| |||||||||||||| ||||  |||||||||||    
T  42500302 acaaaaacaatttaactttattttatcttttgatataaaaatagcttatgcaagcttatacattagcgcttgtgctataag 42500382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 15015837 - 15015778
Alignment:
Q  17 caatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagc 76  Q
    |||||||| | ||||| | ||||||||| |||||||| ||| ||||||||||||||||||    
T  15015837 caatttaacgttatttcaccttttgctacaaaaatagcttatgcaagcttatacataagc 15015778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 25461744 - 25461787
Alignment:
Q  31 tttatcttttgctataaaaatagattaagcaagcttatacataa 74  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||    
T  25461744 tttatcttttgctataaaaatagcttatgcaagcttatatataa 25461787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 14932285 - 14932236
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagatta 57  Q
    ||||||||| ||||||||   ||||||||||||||||||||||||||||||    
T  14932285 tatacaaaa-caatttaactttattttatcttttgctataaaaatagatta 14932236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 7999181 - 7999132
Alignment:
Q  28 tattttatcttttgctataaaaatagattaagcaagcttatacataagcg 77  Q
    ||||||| ||||||| |||||||||  ||| |||||||||||||||||||    
T  7999181 tattttaccttttgccataaaaataacttatgcaagcttatacataagcg 7999132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 25461064 - 25461019
Alignment:
Q  31 tttatcttttgctataaaaatagattaagcaagcttatacataagc 76  Q
    |||||||||||||| |||||||| ||| ||||||||||| ||||||    
T  25461064 tttatcttttgctagaaaaatagcttacgcaagcttatatataagc 25461019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 35446052 - 35445992
Alignment:
Q  6 gtatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagctt 66  Q
    |||||||||| ||||||||   ||||||||| |||||||||||||||| ||| | ||||||    
T  35446052 gtatacaaaaacaatttaactttattttatcatttgctataaaaatagcttatgtaagctt 35445992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 12862322 - 12862389
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  12862322 tatacaaaa-caatttaaatctattttatcttttgctataaaaatagattatgcaagcttaaacataag 12862389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 51929439 - 51929504
Alignment:
Q  12 aaaatcaatttaatgctattttatcttttgctataaaaatagattaagc-aagcttatacataagc 76  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||| || ||||||||||||||||    
T  51929439 aaaaacaatttaatgctattttatcttttgctataaaaatatcttatgcaaagcttatacataagc 51929504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 35696251 - 35696187
Alignment:
Q  12 aaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagc 76  Q
    |||| |||||||||| || ||||||||||||||||||||||| ||| ||||| | ||||| ||||    
T  35696251 aaaaacaatttaatgttagtttatcttttgctataaaaatagcttacgcaagttcatacaaaagc 35696187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 30956700 - 30956767
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataa 74  Q
    ||||||||| ||||||||   ||||||||||||||||||| |||||| ||| | |||||||| |||||    
T  30956700 tatacaaaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataa 30956767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 30972512 - 30972579
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataa 74  Q
    ||||||||| ||||||||   ||||||||||||||||||| |||||| ||| | |||||||| |||||    
T  30972512 tatacaaaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataa 30972579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 1508675 - 1508725
Alignment:
Q  28 tattttatcttttgctataaaaa-tagattaagcaagcttatacataagcg 77  Q
    |||||||||||||||| |||||| ||| ||| |||||||||||||||||||    
T  1508675 tattttatcttttgctttaaaaaatagtttatgcaagcttatacataagcg 1508725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 5331279 - 5331222
Alignment:
Q  17 caatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    |||||||| | |||||| ||||||||||||||| ||| ||| |||||||||||||||||    
T  5331279 caatttaacgttattttctcttttgctataaaa-tagcttatgcaagcttatacataag 5331222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 20170519 - 20170449
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagcg 77  Q
    ||||||||| ||||||||   |||||||||||||||  ||||||||| ||  ||||||| |||||||||||    
T  20170519 tatacaaaaacaatttaacattattttatcttttgcagtaaaaatagcttgtgcaagctgatacataagcg 20170449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 20880450 - 20880404
Alignment:
Q  30 ttttatcttttgctataaaaatagattaagcaagcttatacataagc 76  Q
    ||||||| |||||||||||||||| ||| | ||||||||||||||||    
T  20880450 ttttatcatttgctataaaaatagcttatgtaagcttatacataagc 20880404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 29520563 - 29520620
Alignment:
Q  17 caatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    |||||||| | |||||| ||||||||||| ||||||| ||| |||||||||||||||||    
T  29520563 caatttaacgttattttctcttttgctat-aaaatagcttatgcaagcttatacataag 29520620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 29520415 - 29520470
Alignment:
Q  17 caatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacata 73  Q
    |||||||| | ||| |||||||||||| ||||||||| ||| |||||||||||||||    
T  29520415 caatttaacgttatgttatcttttgct-taaaaatagcttatgcaagcttatacata 29520470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 43505947 - 43505884
Alignment:
Q  12 aaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    |||| |||||||| | |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  43505947 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcaagcttatacataag 43505884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 31076460 - 31076529
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagc 76  Q
    ||||||||| || |||||   |||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  31076460 tatacaaaaacagtttaaacttattttatcttttgctctaaaaatagcttatgcaagcttatacataagc 31076529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 54069491 - 54069559
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    ||||||||| ||||||||   |||||||||||||| |||||||||||  || |||||||||||||||||    
T  54069491 tatacaaaaacaatttaacattattttatcttttgatataaaaatagcatatgcaagcttatacataag 54069559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 33587051 - 33587098
Alignment:
Q  30 ttttatcttttgctataaaaatagattaagcaagcttatacataagcg 77  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  33587051 ttttatctttcgctataaaaatagcttatgcaagcttatacataagcg 33587098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 25904285 - 25904351
Alignment:
Q  8 atacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataa 74  Q
    |||||||||||||||||   |||||||||||||||| ||||||||| ||| | ||||||||| ||||    
T  25904285 atacaaaatcaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 25904351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 403518 - 403453
Alignment:
Q  12 aaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagcg 77  Q
    |||| |||||||| | |||||||||||||||||||||| ||  ||| ||||||||||| |||||||    
T  403518 aaaaacaatttaacgttattttatcttttgctataaaagtaacttacgcaagcttatagataagcg 403453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 42404074 - 42404155
Alignment:
Q  9 tacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagcggctgtgctataag 90  Q
    ||||||| ||||||||   ||||||||||||||||||||||| ||  || |||| |||||||||||| |  |||||||||||    
T  42404074 tacaaaaacaatttaacattattttatcttttgctataaaaagagcgtatgcaaacttatacataagtgcttgtgctataag 42404155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 15177286 - 15177342
Alignment:
Q  17 caatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacata 73  Q
    |||||||| | |||||||||||| ||||| ||||||| ||| |||||||||||||||    
T  15177286 caatttaacgttattttatctttagctattaaaatagcttatgcaagcttatacata 15177342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 41336756 - 41336689
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    ||||||||| ||||||||   |||||||||||| ||||||||||||| ||| |||||| ||||||||||    
T  41336756 tatacaaaaacaatttaactttattttatcttt-gctataaaaatagcttatgcaagcctatacataag 41336689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 44797879 - 44797827
Alignment:
Q  10 acaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaa 62  Q
    ||||||||||||||| | | |||||||||||||||||||||||| ||| ||||    
T  44797879 acaaaatcaatttaacgttgttttatcttttgctataaaaatagcttatgcaa 44797827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 45935294 - 45935362
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    ||||||||| ||| |||| | || || ||||||||||||||| |||| ||| |||||||||||||||||    
T  45935294 tatacaaaaacaaattaacgttaattaatcttttgctataaacatagcttatgcaagcttatacataag 45935362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 54426031 - 54425958
Alignment:
Q  17 caatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagcggctgtgctataag 90  Q
    ||||||| || ||||||||||  ||||| |||| ||| ||| |||||||||||||||||||  |||| ||||||    
T  54426031 caatttagtgttattttatctgctgctacaaaagtagcttatgcaagcttatacataagcgcttgtgatataag 54425958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 30536637 - 30536701
Alignment:
Q  12 aaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagc 76  Q
    |||| |||||||| | ||| |||||||||||||||||||||| ||| ||||||||||||||||||    
T  30536637 aaaaacaatttaacgttatcttatcttttgctataaaaatagcttatgcaagcttatacataagc 30536701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 30536474 - 30536405
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagc 76  Q
    ||||||||| ||||||||   ||||||||| |||||||||| ||||| ||| |||| |||||||||||||    
T  30536474 tatacaaaaacaatttaacattattttatcatttgctataataatagcttatgcaaacttatacataagc 30536405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 18076171 - 18076124
Alignment:
Q  28 tattttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    |||||| ||||||||||||||||||  ||| |||||||||||||||||    
T  18076171 tattttctcttttgctataaaaataacttatgcaagcttatacataag 18076124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 32592583 - 32592513
Alignment:
Q  6 gtatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagcg 77  Q
    |||||||||| ||||||||   ||||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  32592583 gtatacaaaa-caatttaacattattttatctttttctataaaaatagtttatgcaagcttatacataagcg 32592513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 1875122 - 1875076
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatag 53  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||    
T  1875122 tatacaaaagcaatttaatgttattttatcttttgctataacaatag 1875076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 42420368 - 42420414
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatag 53  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||    
T  42420368 tatacaaaaacaatttaacgttattttatcttttgctataaaaatag 42420414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 15305632 - 15305584
Alignment:
Q  28 tattttatcttttgctataaaaatagattaagcaagcttatacataagc 76  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||| ||||    
T  15305632 tattttatcatttgctataaaaatagcttatgcaagcttatacacaagc 15305584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 20933730 - 20933683
Alignment:
Q  28 tattttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    |||||||||||||| | ||||||||||||| |||||| ||||||||||    
T  20933730 tattttatcttttgttgtaaaaatagattatgcaagcctatacataag 20933683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 26202015 - 26201956
Alignment:
Q  17 caatttaatgctattttatct-tttgctataaaaatagattaagcaagcttatacataag 75  Q
    |||||||| | |||||||||| |||||||||||||||| ||| ||||||||||| |||||    
T  26202015 caatttaacgttattttatctctttgctataaaaatagcttatgcaagcttatatataag 26201956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 23974565 - 23974632
Alignment:
Q  6 gtatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    ||||| |||| ||||||||  ||||||| |||||| |||||||||||| ||||| |||||||| ||||||    
T  23974565 gtataaaaaagcaatttaa--ctattttgtctttttctataaaaatagcttaagtaagcttatgcataag 23974632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 24100922 - 24100880
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaa 49  Q
    ||||||||||||| |||||| ||||||| ||||||||||||||    
T  24100922 tatacaaaatcaaattaatgttattttaccttttgctataaaa 24100880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 45661185 - 45661244
Alignment:
Q  9 tacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttat 68  Q
    ||||||| |||||||||| ||||||||||||||||||||||||   ||||||||||||||    
T  45661185 tacaaaaacaatttaatgttattttatcttttgctataaaaatgacttaagcaagcttat 45661244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 42391361 - 42391293
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagc 76  Q
    ||||||||| |||||||||| |||||| | ||| | ||||||||||| ||||||||||||||||||||||    
T  42391361 tatacaaaaacaatttaatgttatttt-tgtttcgttataaaaatagtttaagcaagcttatacataagc 42391293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 45145222 - 45145176
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatag 53  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||||    
T  45145222 tatacaaaaacaatttaatattattttatcttttgctataaaaatag 45145176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 32491511 - 32491466
Alignment:
Q  45 taaaaatagattaagcaagcttatacataagcggctgtgctataag 90  Q
    ||||||||| ||| |||||||||||||||||||| |||||||||||    
T  32491511 taaaaatagcttatgcaagcttatacataagcggttgtgctataag 32491466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 14385838 - 14385906
Alignment:
Q  8 atacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagc 76  Q
    |||||||| ||||||||   |||| ||||||||||||||||||||| ||  || |||||||||||||||    
T  14385838 atacaaaaacaatttaacattattctatcttttgctataaaaatagtttctgccagcttatacataagc 14385906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 18556923 - 18556853
Alignment:
Q  6 gtatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagcg 77  Q
    |||||||||| ||||||||   ||||||||||||||| |||||||||| |||  |||||||||||| |||||    
T  18556923 gtatacaaaa-caatttaacaatattttatcttttgcaataaaaatagcttatacaagcttatacacaagcg 18556853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 41184724 - 41184770
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatag 53  Q
    ||||||||| ||||||||   ||||||||||||||||||||||||||    
T  41184724 tatacaaaaacaatttaacattattttatcttttgctataaaaatag 41184770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 37473372 - 37473327
Alignment:
Q  30 ttttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    ||||||| |||||||||||||||| ||| | |||||||||||||||    
T  37473372 ttttatcatttgctataaaaatagcttatgtaagcttatacataag 37473327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 42174829 - 42174784
Alignment:
Q  31 tttatcttttgctataaaaatagattaagcaagcttatacataagc 76  Q
    ||||||||||| |||||||||||  || ||||||||||||||||||    
T  42174829 tttatcttttgatataaaaatagcctatgcaagcttatacataagc 42174784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 44932029 - 44932074
Alignment:
Q  30 ttttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    ||||||||||||||||||| |||| ||| |||||||||||| ||||    
T  44932029 ttttatcttttgctataaatatagtttatgcaagcttatacctaag 44932074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 5063459 - 5063403
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaag 63  Q
    ||||||||| ||| |||||| |||||||||||||  ||||||||||| ||| |||||    
T  5063459 tatacaaaaacaagttaatgttattttatcttttagtataaaaatagtttatgcaag 5063403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 35644055 - 35644125
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagcg 77  Q
    ||||| ||| |||||||| | || |||||||||||| | |||||||| |||||||||||||||||||||||    
T  35644055 tatacgaaaacaatttaacggtaatttatcttttgccagaaaaatagcttaagcaagcttatacataagcg 35644125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 14956373 - 14956437
Alignment:
Q  11 caaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    ||||| |||||||||| ||||| ||||||| | |||||||||| ||| |||||||||||||||||    
T  14956373 caaaaacaatttaatgttatttcatcttttacaataaaaatagcttatgcaagcttatacataag 14956437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 32976035 - 32975987
Alignment:
Q  28 tattttatcttttgctataaaaatagattaagcaagcttatacataagc 76  Q
    |||||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  32976035 tattttatcttttgctataaaaatagcttatgcaagcttatatataagc 32975987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 12497305 - 12497372
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataa 74  Q
    ||||||||| ||| ||||   |||||||||||||||||||||||| | ||| ||||||||||||||||    
T  12497305 tatacaaaaacaagttaactttattttatcttttgctataaaaatggcttatgcaagcttatacataa 12497372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 38353324 - 38353276
Alignment:
Q  28 tattttatcttttgctataaaaatagattaagcaagcttatacataagcg 77  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||||    
T  38353324 tattttatcttttgc-ataaaaatagcttatgcaagcttatacataagcg 38353276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 6525803 - 6525753
Alignment:
Q  18 aatttaatgctattttatcttttgctataaaaatagattaagcaagcttat 68  Q
    ||||||||| |||||||  ||||||||||||||||| ||| ||||||||||    
T  6525803 aatttaatgttattttagtttttgctataaaaatagcttatgcaagcttat 6525753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 1058169 - 1058218
Alignment:
Q  28 tattttatcttttgctataaaaatagattaagcaagcttatacataagcg 77  Q
    ||||||||  |||||||||||||||| ||| | |||||||||||||||||    
T  1058169 tattttatgatttgctataaaaatagcttatgtaagcttatacataagcg 1058218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 16736078 - 16736034
Alignment:
Q  9 tacaaaatcaatttaatgctattttatcttttgctataaaaatag 53  Q
    ||||||| | |||||||| |||||||||||||||||| |||||||    
T  16736078 tacaaaaactatttaatgttattttatcttttgctatcaaaatag 16736034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 16825614 - 16825694
Alignment:
Q  10 acaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagcggctgtgctataag 90  Q
    |||||| ||||||||   ||||||||| ||| |||||| ||||| ||| ||||| |||||||||||||  ||| |||||||    
T  16825614 acaaaaacaatttaacattattttatcctttactataagaatagcttatgcaaggttatacataagcgcttgttctataag 16825694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 25930628 - 25930712
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagcg-gctgtgctataag 90  Q
    ||||||||| || ||||||  ||||| ||| ||| ||||| |||||| ||| | ||||||||||||||| | |||||||||||||    
T  25930628 tatacaaaaacattttaattttatttcatcctttcctatagaaatagcttatgtaagcttatacataagagcgctgtgctataag 25930712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 29168147 - 29168195
Alignment:
Q  28 tattttatcttttgctataaaaatagattaagcaagcttatacataagc 76  Q
    ||||||||||||||||||| |||||| ||| |  |||||||||||||||    
T  29168147 tattttatcttttgctatagaaatagcttatgtgagcttatacataagc 29168195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 48140191 - 48140142
Alignment:
Q  28 tattttatcttttgctataaaaatagattaagcaagcttatacataagcg 77  Q
    |||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  48140191 tattttatcttttgttataaaaatagcttatgcaagcttatacataagcg 48140142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 45806410 - 45806462
Alignment:
Q  17 caatttaatgctattttatcttttgctataaaaatagattaagcaagcttata 69  Q
    |||||||| | |||||||||||||||||||||||||| ||| |||||||||||    
T  45806410 caatttaacgttattttatcttttgctataaaaatagcttatgcaagcttata 45806462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 420356 - 420289
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataa 74  Q
    ||||||||| ||||| ||   ||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  420356 tatacaaaaacaattgaacattattttatcttttgctataaacatagcttatgcaagcttatacataa 420289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 31247602 - 31247665
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatac 70  Q
    ||||||||| |||||||  | ||||| |||||||||||||||||||| ||| ||||||||||||    
T  31247602 tatacaaaaccaatttatcgttatttcatcttttgctataaaaatagcttatgcaagcttatac 31247665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 45806556 - 45806619
Alignment:
Q  12 aaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    |||| |||||||| | |||||| |||||||||||||| |||| ||| |||||||||||||||||    
T  45806556 aaaaacaatttaacgttattttctcttttgctataaacatagcttatgcaagcttatacataag 45806619  T

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Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 20234477 - 20234408
Alignment:
Q  9 tacaaaatcaatttaatgctattttatcttttgctataaaaa--tagattaagcaagcttatacataagc 76  Q
    ||||||| |||||||||  |||||||||||||||||||||||  ||| ||| ||| ||||||||||||||    
T  20234477 tacaaaaacaatttaattatattttatcttttgctataaaaatttagcttatgcatgcttatacataagc 20234408  T

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Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 21568728 - 21568770
Alignment:
Q  33 tatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  21568728 tatcttttgctataaaaatagcttatgcaagcttatacataag 21568770  T

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Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 31247666 - 31247707
Alignment:
Q  30 ttttatcttttgctataaaaatagattaagcaagcttataca 71  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  31247666 ttttatcttttgctataaaaatagcttatgcaagcttataca 31247707  T

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Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 31744301 - 31744237
Alignment:
Q  11 caaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    ||||| |||||||| ||||||||||||||  |||| ||||||| ||| ||||| |||||||||||    
T  31744301 caaaaacaatttaacgctattttatctttaactatgaaaataggttatgcaagtttatacataag 31744237  T

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Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 23989579 - 23989626
Alignment:
Q  28 tattttatcttttgctataaaaatagattaagcaagcttatacataag 75  Q
    ||||||||||||| |||||||||||| ||| |||| ||||||||||||    
T  23989579 tattttatcttttactataaaaatagtttatgcaaacttatacataag 23989626  T

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Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 4970883 - 4970929
Alignment:
Q  28 tattttatcttttgctataaaaatagattaagcaagcttatacataa 74  Q
    ||||||||||||||||||| |||||| ||| | ||||||||||||||    
T  4970883 tattttatcttttgctatagaaatagcttatgtaagcttatacataa 4970929  T

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Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 46078143 - 46078073
Alignment:
Q  7 tatacaaaatcaatttaatgctattttatcttttgctataaaaatagattaagcaagcttatacataagcg 77  Q
    ||||||||| ||||||||   | ||||||||||| |||||||||||  ||| | |||||||||||||||||    
T  46078143 tatacaaaaacaatttaactttgttttatctttttctataaaaataacttatgtaagcttatacataagcg 46078073  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 45004741 - 45004700
Alignment:
Q  28 tattttatcttttgctataaaaatagattaagcaagcttata 69  Q
    |||||||||||||||||||||||||| ||| |||||| ||||    
T  45004741 tattttatcttttgctataaaaatagtttatgcaagcatata 45004700  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 9210602 - 9210554
Alignment:
Q  29 attttatcttttgctataaaaatagattaagcaagcttatacataagcg 77  Q
    ||||||| |||| |||||||| ||| ||| |||||||||||||||||||    
T  9210602 attttatttttttctataaaagtagcttatgcaagcttatacataagcg 9210554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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