View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10465_high_4 (Length: 336)
Name: NF10465_high_4
Description: NF10465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10465_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 16 - 325
Target Start/End: Original strand, 34629171 - 34629480
Alignment:
| Q |
16 |
aagtttaatatcgcatgtatgttactatgtcaagttgacttaaattttcctcaaatattttggttgagggtgttaaaataatgaaagtatttcctaaatg |
115 |
Q |
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| T |
34629171 |
aagtttaatatcgcatgtatgttactatgtcatgttgacttaaattttcctcaaatattttggttgagggtgttaaaataatgaaagtatttcctaaatg |
34629270 |
T |
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| Q |
116 |
gaaataactagtgaagtgagtctcaccgtatcctcatccaatagtccagatgcaggatcaaatagttgactaatgaattcttcatctgtttccttgtgtt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
34629271 |
gaaataactagtgaagtgagtctcaccgtatcctcatccaatagtccagatgcaggatcaaatagttggctaatgaattcttcatctgtttccttgtgtt |
34629370 |
T |
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| Q |
216 |
cttcaatgcttatagctgctacaatattgagaaccagaacaatgcaaaaagtacactttatgacacccatatactgttgaattattaccatcgtgcttca |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34629371 |
cttcaatgcttatagctgctacaatattgagaaccagaacaatgcaaaaagtacactttatgacacccatatactgttgaattattaccatcgtgcttca |
34629470 |
T |
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| Q |
316 |
tatgcttctt |
325 |
Q |
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|||||||||| |
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| T |
34629471 |
tatgcttctt |
34629480 |
T |
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