View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10465_low_10 (Length: 272)

Name: NF10465_low_10
Description: NF10465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10465_low_10
NF10465_low_10
[»] chr1 (43 HSPs)
chr1 (17-263)||(4878770-4879028)
chr1 (43-115)||(1188681-1188753)
chr1 (42-119)||(24600403-24600480)
chr1 (43-123)||(19283540-19283620)
chr1 (43-119)||(37850689-37850765)
chr1 (45-115)||(1187457-1187527)
chr1 (50-116)||(44290550-44290616)
chr1 (43-109)||(50469180-50469246)
chr1 (51-116)||(3550721-3550786)
chr1 (43-116)||(5320057-5320130)
chr1 (43-116)||(17294570-17294643)
chr1 (51-116)||(22793279-22793344)
chr1 (43-112)||(34649431-34649500)
chr1 (43-116)||(41157368-41157441)
chr1 (43-116)||(41184517-41184590)
chr1 (49-101)||(47379892-47379944)
chr1 (56-116)||(50052115-50052175)
chr1 (50-118)||(50556451-50556519)
chr1 (42-101)||(24132092-24132151)
chr1 (50-116)||(3537239-3537305)
chr1 (50-116)||(32594808-32594874)
chr1 (43-85)||(35154162-35154204)
chr1 (43-116)||(37556104-37556178)
chr1 (50-116)||(44290917-44290983)
chr1 (43-116)||(5996963-5997036)
chr1 (56-116)||(9955913-9955974)
chr1 (43-116)||(22077587-22077660)
chr1 (43-116)||(26661614-26661687)
chr1 (43-116)||(29798192-29798265)
chr1 (43-116)||(34364500-34364573)
chr1 (50-111)||(41142372-41142433)
chr1 (65-130)||(44091909-44091974)
chr1 (43-115)||(26661991-26662063)
chr1 (72-119)||(10351182-10351229)
chr1 (50-116)||(45084382-45084448)
chr1 (43-116)||(66564-66637)
chr1 (43-116)||(24448270-24448343)
chr1 (43-116)||(34364918-34364991)
chr1 (51-116)||(40082408-40082473)
chr1 (43-87)||(22077243-22077287)
chr1 (56-124)||(35530398-35530466)
chr1 (56-116)||(37555736-37555796)
chr1 (83-115)||(50081150-50081182)
[»] chr8 (32 HSPs)
chr8 (43-117)||(4154371-4154445)
chr8 (40-107)||(20995502-20995569)
chr8 (43-113)||(4154761-4154831)
chr8 (41-116)||(9620768-9620843)
chr8 (42-113)||(41972150-41972221)
chr8 (50-116)||(3669687-3669753)
chr8 (43-111)||(3038387-3038455)
chr8 (43-134)||(8918838-8918929)
chr8 (43-89)||(147822-147868)
chr8 (50-116)||(45122002-45122068)
chr8 (45-119)||(45122146-45122220)
chr8 (43-116)||(5420644-5420717)
chr8 (43-116)||(9309348-9309421)
chr8 (56-101)||(40518588-40518633)
chr8 (66-115)||(44358163-44358212)
chr8 (43-116)||(9308970-9309045)
chr8 (43-111)||(9608738-9608806)
chr8 (57-116)||(70366-70425)
chr8 (43-101)||(6876969-6877028)
chr8 (57-116)||(34835216-34835275)
chr8 (57-116)||(41416263-41416322)
chr8 (50-116)||(1014337-1014403)
chr8 (56-101)||(147457-147502)
chr8 (50-111)||(3670060-3670121)
chr8 (50-99)||(6731904-6731953)
chr8 (44-89)||(12283867-12283912)
chr8 (63-116)||(20870665-20870718)
chr8 (43-116)||(25561908-25561981)
chr8 (43-116)||(30359602-30359675)
chr8 (56-133)||(43274854-43274931)
chr8 (56-116)||(18372791-18372851)
chr8 (60-116)||(25561736-25561792)
[»] chr4 (35 HSPs)
chr4 (43-116)||(11348418-11348491)
chr4 (43-119)||(28034222-28034298)
chr4 (56-116)||(15841074-15841134)
chr4 (43-109)||(1731744-1731810)
chr4 (44-116)||(44620654-44620726)
chr4 (50-116)||(54017685-54017751)
chr4 (43-116)||(3244541-3244614)
chr4 (43-116)||(25483329-25483402)
chr4 (56-109)||(49302910-49302963)
chr4 (43-116)||(52884880-52884953)
chr4 (43-111)||(52884688-52884756)
chr4 (42-116)||(2740692-2740766)
chr4 (43-133)||(50002419-50002509)
chr4 (43-116)||(3341121-3341194)
chr4 (43-116)||(4390191-4390264)
chr4 (43-116)||(10245913-10245986)
chr4 (43-116)||(39404391-39404464)
chr4 (43-119)||(12197371-12197447)
chr4 (64-116)||(15841458-15841510)
chr4 (51-119)||(16888903-16888971)
chr4 (43-111)||(22183359-22183427)
chr4 (50-118)||(23556954-23557022)
chr4 (56-119)||(20826223-20826286)
chr4 (43-110)||(39792956-39793023)
chr4 (50-116)||(2741071-2741137)
chr4 (50-116)||(6975546-6975612)
chr4 (81-115)||(39099845-39099879)
chr4 (43-101)||(41707569-41707627)
chr4 (43-116)||(4955407-4955480)
chr4 (43-123)||(43174499-43174580)
chr4 (43-116)||(49076538-49076611)
chr4 (56-116)||(760195-760255)
chr4 (43-111)||(3700358-3700426)
chr4 (56-116)||(50459727-50459787)
chr4 (60-116)||(54343091-54343147)
[»] chr2 (37 HSPs)
chr2 (42-116)||(33561543-33561617)
chr2 (43-116)||(33953863-33953936)
chr2 (42-116)||(962590-962664)
chr2 (43-112)||(29873633-29873702)
chr2 (50-116)||(7598609-7598675)
chr2 (43-109)||(33954360-33954426)
chr2 (56-109)||(29874122-29874175)
chr2 (43-116)||(30323457-30323530)
chr2 (43-116)||(42514642-42514715)
chr2 (56-116)||(40733523-40733583)
chr2 (43-116)||(41678459-41678534)
chr2 (43-110)||(31468844-31468911)
chr2 (50-116)||(5543090-5543156)
chr2 (50-116)||(36178697-36178763)
chr2 (43-101)||(36785670-36785728)
chr2 (50-116)||(37106188-37106254)
chr2 (42-87)||(16590880-16590925)
chr2 (43-116)||(28254329-28254402)
chr2 (43-116)||(28531406-28531479)
chr2 (43-116)||(30313171-30313243)
chr2 (43-116)||(37632689-37632762)
chr2 (43-116)||(38796310-38796383)
chr2 (43-116)||(38796712-38796785)
chr2 (56-116)||(6421391-6421451)
chr2 (43-119)||(40679718-40679794)
chr2 (45-116)||(35580815-35580886)
chr2 (43-133)||(6712969-6713059)
chr2 (43-85)||(12529151-12529193)
chr2 (50-116)||(14745759-14745825)
chr2 (43-101)||(16542442-16542500)
chr2 (50-116)||(41283567-41283633)
chr2 (43-116)||(15880256-15880329)
chr2 (43-116)||(29676896-29676969)
chr2 (50-111)||(37105924-37105985)
chr2 (84-116)||(2336658-2336690)
chr2 (58-118)||(34481274-34481334)
chr2 (43-87)||(43443103-43443147)
[»] chr5 (27 HSPs)
chr5 (43-133)||(12662727-12662817)
chr5 (43-116)||(31509616-31509689)
chr5 (43-116)||(36522329-36522402)
chr5 (53-116)||(41170637-41170700)
chr5 (51-101)||(36522003-36522053)
chr5 (43-116)||(15370092-15370165)
chr5 (43-116)||(36492309-36492382)
chr5 (56-116)||(18603212-18603272)
chr5 (45-117)||(35150002-35150074)
chr5 (43-115)||(36568660-36568732)
chr5 (43-101)||(26074253-26074311)
chr5 (43-116)||(1028609-1028682)
chr5 (43-116)||(13415852-13415925)
chr5 (58-111)||(35914857-35914910)
chr5 (43-92)||(36527199-36527248)
chr5 (51-111)||(299490-299550)
chr5 (64-116)||(31509745-31509797)
chr5 (50-101)||(32487394-32487445)
chr5 (56-111)||(38427554-38427609)
chr5 (56-118)||(300965-301027)
chr5 (50-116)||(9498746-9498812)
chr5 (43-101)||(26074889-26074947)
chr5 (50-116)||(40296407-40296473)
chr5 (43-116)||(6224189-6224262)
chr5 (43-88)||(24489324-24489369)
chr5 (43-116)||(41632775-41632848)
chr5 (56-116)||(26074324-26074384)
[»] chr3 (37 HSPs)
chr3 (34-119)||(8327888-8327973)
chr3 (45-116)||(39336321-39336392)
chr3 (43-119)||(43346880-43346956)
chr3 (42-101)||(33803359-33803418)
chr3 (43-101)||(39914245-39914303)
chr3 (42-119)||(33175753-33175830)
chr3 (43-116)||(47965007-47965080)
chr3 (42-115)||(54451269-54451342)
chr3 (56-119)||(25991409-25991472)
chr3 (56-119)||(36986037-36986100)
chr3 (56-119)||(37011476-37011539)
chr3 (45-119)||(29644670-29644744)
chr3 (43-133)||(42342463-42342553)
chr3 (43-133)||(47964593-47964683)
chr3 (43-100)||(2299969-2300026)
chr3 (43-116)||(15773185-15773258)
chr3 (43-116)||(25739517-25739590)
chr3 (43-116)||(31190010-31190083)
chr3 (43-116)||(35946515-35946588)
chr3 (43-116)||(54017908-54017981)
chr3 (42-118)||(46546415-46546491)
chr3 (50-130)||(50612530-50612610)
chr3 (43-90)||(12747870-12747917)
chr3 (50-101)||(22304246-22304297)
chr3 (81-116)||(30399666-30399701)
chr3 (43-102)||(53577357-53577416)
chr3 (84-118)||(2417351-2417385)
chr3 (50-116)||(21832435-21832501)
chr3 (43-85)||(22304071-22304113)
chr3 (42-116)||(25317150-25317224)
chr3 (43-133)||(25755387-25755477)
chr3 (43-101)||(43346643-43346701)
chr3 (43-117)||(52634669-52634743)
chr3 (43-116)||(29644994-29645067)
chr3 (51-116)||(53118066-53118131)
chr3 (56-116)||(11661541-11661601)
chr3 (43-87)||(33809129-33809173)
[»] chr6 (27 HSPs)
chr6 (43-115)||(6071125-6071197)
chr6 (43-115)||(8481920-8481991)
chr6 (43-115)||(33605647-33605719)
chr6 (42-116)||(10911557-10911632)
chr6 (50-116)||(3409259-3409325)
chr6 (43-116)||(2579964-2580037)
chr6 (43-116)||(12092574-12092647)
chr6 (56-116)||(9062441-9062501)
chr6 (50-109)||(33605975-33606034)
chr6 (50-116)||(2378126-2378192)
chr6 (50-116)||(3409660-3409726)
chr6 (50-116)||(26544049-26544115)
chr6 (50-116)||(29518503-29518569)
chr6 (50-116)||(29518920-29518986)
chr6 (50-116)||(32741179-32741245)
chr6 (43-111)||(16454900-16454968)
chr6 (50-109)||(12071790-12071849)
chr6 (50-101)||(14748445-14748496)
chr6 (50-116)||(593801-593867)
chr6 (50-116)||(35210204-35210270)
chr6 (56-101)||(1950292-1950337)
chr6 (43-116)||(2578535-2578607)
chr6 (50-111)||(3058226-3058287)
chr6 (56-101)||(3415464-3415509)
chr6 (43-116)||(16108056-16108129)
chr6 (56-116)||(2377760-2377820)
chr6 (56-116)||(32460672-32460732)
[»] chr7 (32 HSPs)
chr7 (43-116)||(1085708-1085781)
chr7 (43-116)||(30245487-30245560)
chr7 (60-119)||(10341842-10341901)
chr7 (45-111)||(36622955-36623021)
chr7 (43-116)||(7517573-7517646)
chr7 (43-116)||(7554018-7554091)
chr7 (43-116)||(22566754-22566827)
chr7 (43-133)||(23452-23542)
chr7 (43-101)||(118408-118466)
chr7 (43-116)||(30255332-30255405)
chr7 (43-116)||(34218126-34218199)
chr7 (43-100)||(40094502-40094559)
chr7 (43-116)||(45434629-45434702)
chr7 (43-111)||(43241488-43241556)
chr7 (50-101)||(14681510-14681561)
chr7 (43-115)||(37345909-37345983)
chr7 (45-116)||(40230383-40230454)
chr7 (43-101)||(30244694-30244752)
chr7 (50-116)||(37533102-37533168)
chr7 (43-133)||(45433234-45433324)
chr7 (43-116)||(16569189-16569262)
chr7 (43-116)||(16596400-16596473)
chr7 (43-116)||(22567131-22567203)
chr7 (50-111)||(29157565-29157626)
chr7 (43-116)||(30244263-30244336)
chr7 (43-116)||(36109009-36109082)
chr7 (43-116)||(36534876-36534949)
chr7 (43-116)||(41910686-41910759)
chr7 (57-133)||(11845198-11845274)
chr7 (43-111)||(24177428-24177496)
chr7 (43-111)||(30245070-30245138)
chr7 (56-116)||(47129101-47129161)
[»] scaffold0113 (1 HSPs)
scaffold0113 (43-115)||(39831-39903)
[»] scaffold0702 (2 HSPs)
scaffold0702 (50-116)||(234-300)
scaffold0702 (56-116)||(606-666)
[»] scaffold0171 (1 HSPs)
scaffold0171 (43-101)||(17563-17621)
[»] scaffold0734 (2 HSPs)
scaffold0734 (43-116)||(5389-5462)
scaffold0734 (43-116)||(5770-5843)
[»] scaffold0391 (1 HSPs)
scaffold0391 (43-102)||(3091-3150)
[»] scaffold0078 (1 HSPs)
scaffold0078 (43-116)||(5350-5423)


Alignment Details
Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 4878770 - 4879028
Alignment:
Q  17 aatcacaatattatttatgaaattcatgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| ||||||| |||| || ||||||||||||||||||||||    
T  4878770 aatcacaatattattgatgaaattcatgttgtgtgcaattgtgagttatatgttccacatcggataaaatagtgaagcttgaacattttataagtgagag 4878869  T
Q  117 aacacatgaatctattgaacacactagatggagaggtgttgtgtgca-----------tttgacccattaaacttgaacacaatgcttttcctttaacgt 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||           | ||||||||||||||||||||||| |||||||||| || ||    
T  4878870 aacacatgaatctattgaacacactagatggagaggtgttgtgtgcatgtgtgaattgtatgacccattaaacttgaacacaacgcttttccttaaatgt 4878969  T
Q  206 gt-gnnnnnnngcttttaagtcatagtattttctttcaaaatttattttaggttcttct 263  Q
    ||         ||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  4878970 gtacgttttttgcttttaagttgtagtattttctttcaaaatgtattttaggttcttct 4879028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 1188753 - 1188681
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 115  Q
    |||||| ||||| |||||||||||||| ||| ||| |||| |||||||||||||||| |||||||||||||||    
T  1188753 tgttgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtggaggttgaatattttataagtgaga 1188681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 24600480 - 24600403
Alignment:
Q  42 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    ||||||| ||||| |||||||||||||||||| ||| |||| ||||||  ||||||||||| |||||||| |||||||    
T  24600480 atgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacatattataagtaagagaac 24600403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 19283620 - 19283540
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacat 123  Q
    |||||| ||||| |||||||||||||||||||| | |||| ||||||||||||||| || ||| ||| |||||| ||||||    
T  19283620 tgttgtgtgcaagtgtgagttatatgtcccacaccggatagaaaagtggaggttgagcactttgtaaatgagaggacacat 19283540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 37850765 - 37850689
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    |||||| ||||| ||||||||||||||||||||||  |||||| ||| |||||||||||  |||||||| |||||||    
T  37850765 tgttgtgtgcaagtgtgagttatatgtcccacatcgcataaaacagtagaggttgaacaccttataagtaagagaac 37850689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 1187527 - 1187457
Alignment:
Q  45 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 115  Q
    |||| ||||| ||||| ||||||||| ||||||  ||| ||||||||||||| ||||||||||||||||||    
T  1187527 ttgtgtgcaagtgtgaattatatgtctcacatcgaatataaaagtggaggttaaacattttataagtgaga 1187457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 44290616 - 44290550
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||| |||||||| ||||    
T  44290616 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagag 44290550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 50469246 - 50469180
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataa 109  Q
    |||||| ||||| |||||||||||||||| ||||||||||| |||||  |||||||||| |||||||    
T  50469246 tgttgtgtgcaagtgtgagttatatgtcctacatcagataataaagtaaaggttgaacactttataa 50469180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 3550721 - 3550786
Alignment:
Q  51 gcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||| |||||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||    
T  3550721 gcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagag 3550786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 5320130 - 5320057
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||| |||||||||||||| ||||||| |||| ||||||  | ||||||||  |||||||||||||    
T  5320130 tgttgtatgcaagtgtgagttatatgttccacatcggatagaaaagtaaaagttgaacaccttataagtgagag 5320057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 17294570 - 17294643
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  |||||||||| ||||||||| ||||    
T  17294570 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacactttataagtaagag 17294643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 22793279 - 22793344
Alignment:
Q  51 gcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||| ||||||||||||||||||||||  ||| |||||| ||||||||| | ||||||||||||||    
T  22793279 gcaagtgtgagttatatgtcccacatcgtatagaaaagtagaggttgaaaactttataagtgagag 22793344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 34649431 - 34649500
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtg 112  Q
    |||||||| ||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||||    
T  34649431 tgttgtatacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtg 34649500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 41157368 - 41157441
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||  | ||||||||  |||||||| ||||    
T  41157368 tgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaagttgaacaccttataagtaagag 41157441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 41184590 - 41184517
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||| |||  |||||||||| ||||||||| ||||    
T  41184590 tgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacactttataagtaagag 41184517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 47379944 - 47379892
Alignment:
Q  49 atgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    |||||| |||||||||||| ||||||||| |||| ||||||||||||||||||    
T  47379944 atgcaagtgtgagttatatatcccacatcggatagaaaagtggaggttgaaca 47379892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 50052175 - 50052115
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||||||||||||| ||||||| |||  ||||||||||| |||||||| ||||    
T  50052175 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagag 50052115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 50556451 - 50556519
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaa 118  Q
    ||||| |||| ||||||| || ||||||| ||| ||||| |||||||||||| ||||||||||||||||    
T  50556451 tgcaagtgtgggttatatatcacacatcatatagaaaagcggaggttgaacaatttataagtgagagaa 50556519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 24132151 - 24132092
Alignment:
Q  42 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    ||||||||||||| ||||||||||||||||| |||| |||| ||||||  ||||||||||    
T  24132151 atgttgtatgcaactgtgagttatatgtccctcatcggatagaaaagtaaaggttgaaca 24132092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 3537305 - 3537239
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  3537305 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 3537239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 32594874 - 32594808
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||| ||||||||||||| |||  ||||||||||  |||||||| ||||    
T  32594874 tgcaagtgtgagttatatgtcctacatcagataaaatagtaaaggttgaacaccttataagtaagag 32594808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 35154204 - 35154162
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaa 85  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    
T  35154204 tgttgtgtgcaagtgtgagttatatgtcccacatcagataaaa 35154162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 37556104 - 37556178
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaa-agtggaggttgaacattttataagtgagag 116  Q
    |||||| | ||| |||||||||||||||||||||| |||||||| |||  ||||||||||| |||||||| ||||    
T  37556104 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaaatagtaaaggttgaacatcttataagtaagag 37556178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 44290983 - 44290917
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  44290983 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 44290917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 5997036 - 5996963
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| |||||  ||| |||||||||||||||| || || |||||||| | ||||||||||||||| ||||||    
T  5997036 tgttgtgtgcaagcgtgggttatatgtcccacataagttagaaaagtggtgcttgaacattttataaatgagag 5996963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 9955913 - 9955974
Alignment:
Q  56 tgtgagttatatgtcccacatcagat-aaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||||  |||||||| ||||    
T  9955913 tgtgagttatatgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaagag 9955974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 22077660 - 22077587
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||||||| |||||| |||| ||||||  ||||||||||  |||||||| ||||    
T  22077660 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagag 22077587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 26661687 - 26661614
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| | ||| |||||||||||||||||||||| | ||||| |||  ||||||||||  |||||||||||||    
T  26661687 tgttgtgtacaagtgtgagttatatgtcccacatcgggtaaaagagtaaaggttgaacaccttataagtgagag 26661614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 29798192 - 29798265
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||| |||||||||||||||| ||||  ||||||| |||  ||||||||||  |||||||| ||||    
T  29798192 tgttgtatgcaagtgtgagttatatgtcctacattggataaaatagtaaaggttgaacaccttataagtaagag 29798265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 34364500 - 34364573
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  34364500 tgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagag 34364573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 41142372 - 41142433
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  ||||||||    
T  41142372 tgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagt 41142433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 44091909 - 44091974
Alignment:
Q  65 tatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatcta 130  Q
    |||||| ||||||||||  ||||||  |||||||||| ||||||||||||||||| ||| ||||||    
T  44091909 tatgtcacacatcagatgtaaaagtaaaggttgaacactttataagtgagagaacccataaatcta 44091974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 26662063 - 26661991
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 115  Q
    |||||| | ||| |||||||||||| ||||| ||||||||||| |||  ||||||||||  ||||||||||||    
T  26662063 tgttgtgtacaagtgtgagttatatatcccatatcagataaaagagtaaaggttgaacaccttataagtgaga 26661991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 10351182 - 10351229
Alignment:
Q  72 cacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||||||    
T  10351182 cacatcagatagaaaaatagaggttgaacactttataagtgagagaac 10351229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 45084382 - 45084448
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||| ||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  45084382 tgcaagtgtgagttatatctcccacatcggataaaacagtaaaggttgaacaccttataagtaagag 45084448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 66637 - 66564
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||| ||| ||| |||| ||||||  ||||||||||  |||||||| ||||    
T  66637 tgttgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtaaaggttgaacaccttataagtaagag 66564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 24448270 - 24448343
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||| ||||||||||   |||||  | | ||||||||| |||||||||||||||||||||||    
T  24448270 tgttgtgtgcaagtgtaagttatatgttagacatctcaaagaaaagtggaagttgaacattttataagtgagag 24448343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 34364918 - 34364991
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||| | |  ||||||||||  |||||||| ||||    
T  34364918 tgttgtgtgcaagtgtgagttatatgtcacacatcggataaaataataaaggttgaacaccttataagtaagag 34364991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 40082408 - 40082473
Alignment:
Q  51 gcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||| |||||||||||||||| ||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  40082408 gcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagag 40082473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 22077287 - 22077243
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaa 87  Q
    |||||| ||||| |||||||||||||||||||||| |||| ||||    
T  22077287 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaa 22077243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 35530466 - 35530398
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatg 124  Q
    |||| |||||||||||||| ||  |||||||| |  ||||||||||||||||| || |||| |||||||    
T  35530466 tgtgtgttatatgtcccacgtcgaataaaaaaattaaggttgaacattttatatgtaagaggacacatg 35530398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 37555736 - 37555796
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||||||| |||||||||| ||||||| |||| |||||||| |  |||||||| ||||    
T  37555736 tgtgagttataagtcccacatcggataaaatagtgaaggttgaatacattataagtaagag 37555796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 50081182 - 50081150
Alignment:
Q  83 aaaaagtggaggttgaacattttataagtgaga 115  Q
    |||||||||||| ||||||||||||||||||||    
T  50081182 aaaaagtggaggctgaacattttataagtgaga 50081150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 4154445 - 4154371
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagaga 117  Q
    |||||| ||||| |||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||    
T  4154445 tgttgtgtgcaaatgtgagttatatgtcctacatcagatagaaaagtggaggttgaacactttataagtgagaga 4154371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 20995569 - 20995502
Alignment:
Q  40 tcatgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttat 107  Q
    ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  20995569 tcatgttgtgtgcaagtgtgagttatatgtctcacatcagataaaaaagtggaggttgaacactttat 20995502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 4154831 - 4154761
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtga 113  Q
    |||||| ||||| |||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  4154831 tgttgtgtgcaagtgtgagttatatgtcccacatctgatagaaaagtggaggttgaacactttataagtga 4154761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 9620843 - 9620768
Alignment:
Q  41 catgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||| ||||| ||||||||||||||| |||| |||||| |||||| || ||||| || ||||||||||||||    
T  9620843 catgttgtgtgcaagtgtgagttatatgtctcacaacagatagaaaagtagaagttgatcactttataagtgagag 9620768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 41972150 - 41972221
Alignment:
Q  42 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtga 113  Q
    ||||||| ||||| |||||||||||||||||||||| |||| ||||||  ||||||||||  ||||||||||    
T  41972150 atgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtga 41972221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 3669687 - 3669753
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||    
T  3669687 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagag 3669753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 3038455 - 3038387
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  |||||||||| |||||||||    
T  3038455 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagt 3038387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 8918929 - 8918838
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattga 134  Q
    |||||| ||||| ||||||||| |||||||||||||||||  | |||  |||||||||| ||||||||| |||| || ||| || |||||||    
T  8918929 tgttgtgtgcaagtgtgagttacatgtcccacatcagatagcagagtaaaggttgaacactttataagtaagaggacccataaacctattga 8918838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 147822 - 147868
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagt 89  Q
    |||||| ||||| |||||||||||||||||||||| |||||||||||    
T  147822 tgttgtgtgcaagtgtgagttatatgtcccacatctgataaaaaagt 147868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 45122068 - 45122002
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| ||||||||||||||||||||||  |||||| |||  |||||||||| ||||||||| ||||    
T  45122068 tgcaagtgtgagttatatgtcccacatcgcataaaatagtaaaggttgaacactttataagtaagag 45122002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 45122220 - 45122146
Alignment:
Q  45 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    |||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||  |||||||| |||||||    
T  45122220 ttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagaac 45122146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 5420644 - 5420717
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||| ||||  |||||||||||||||| |||| || |||  ||||||||||| |||||||| ||||    
T  5420644 tgttgtatgcaagtgtgtattatatgtcccacatcggatagaatagtaaaggttgaacatcttataagtaagag 5420717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 9309348 - 9309421
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  | ||||||||  |||||||| ||||    
T  9309348 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaatgttgaacaccttataagtaagag 9309421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 40518588 - 40518633
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||    
T  40518588 tgtgagttatatgtcccacatcagatagaaaagtaaaggttgaaca 40518633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 44358212 - 44358163
Alignment:
Q  66 atgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 115  Q
    ||||| ||||||||||||||||||| | ||||| ||||||||||||||||    
T  44358212 atgtctcacatcagataaaaaagtgaatgttgaccattttataagtgaga 44358163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 9308970 - 9309045
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcc--cacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||||||||  |||||||||||||| |||  | ||||||||| |||||||| ||||    
T  9308970 tgttgtgtgcaagtgtgagttatatgtcctacacatcagataaaagagtaaaagttgaacatgttataagtaagag 9309045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 9608738 - 9608806
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    |||||| ||||| |||||||||||||||||| ||| |||| ||||||  ||||||||||  ||||||||    
T  9608738 tgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacaccttataagt 9608806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 70425 - 70366
Alignment:
Q  57 gtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||||||||||||||||| ||||||| |||  | ||||||||| |||||||| ||||    
T  70425 gtgagttatatgtcccacatcggataaaagagtaaatgttgaacatcttataagtaagag 70366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 6877028 - 6876969
Alignment:
Q  43 tgttgtatgcaattgtgagttatat-gtcccacatcagataaaaaagtggaggttgaaca 101  Q
    |||||| ||||| |||||||||||| |||||||||| |||||||||||  ||||||||||    
T  6877028 tgttgtgtgcaagtgtgagttatatagtcccacatcggataaaaaagtaaaggttgaaca 6876969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 34835216 - 34835275
Alignment:
Q  57 gtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  34835216 gtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagag 34835275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 41416322 - 41416263
Alignment:
Q  57 gtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  41416322 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 41416263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 1014403 - 1014337
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||  ||||||||||||| |||  ||||||||||  |||||||| ||||    
T  1014403 tgcaagtgtgagttatatgtcatacatcagataaaatagtaaaggttgaacaccttataagtaagag 1014337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 147457 - 147502
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  147457 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaaca 147502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 3670060 - 3670121
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||| ||||  ||||||||    
T  3670060 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtttaacaccttataagt 3670121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 6731904 - 6731953
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaa 99  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||    
T  6731904 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 6731953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 12283867 - 12283912
Alignment:
Q  44 gttgtatgcaattgtgagttatatgtcccacatcagataaaaaagt 89  Q
    ||||| ||||| ||| ||||||||||||||| ||||||||||||||    
T  12283867 gttgtgtgcaagtgtaagttatatgtcccacgtcagataaaaaagt 12283912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 20870718 - 20870665
Alignment:
Q  63 tatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||| ||||||||||||||| |||  ||||||||||| |||||||| ||||    
T  20870718 tatatgttccacatcagataaaatagtaaaggttgaacatcttataagtaagag 20870665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 25561981 - 25561908
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  | ||||||||  |||||||| ||||    
T  25561981 tgttgtctacaagtgtgagttatatgtcccacatcggataaaagagtaaacgttgaacaccttataagtaagag 25561908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 30359602 - 30359675
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| | ||| ||||||||||||||| |||||||||||||| |||  | ||||||||  |||||||| ||||    
T  30359602 tgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaagttgaacaccttataagtaagag 30359675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 43274931 - 43274854
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 133  Q
    ||||||||||||||  |||||||||||||| |||  |||||||| || |||||||| |||| || ||| || ||||||    
T  43274931 tgtgagttatatgtttcacatcagataaaagagtaaaggttgaatatattataagtaagaggacccataaacctattg 43274854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 18372851 - 18372791
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||||||||||| |||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  18372851 tgtgagttatatgtcacacatcggataaaatagtaaaggttgaacaccttataagtaagag 18372791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 25561792 - 25561736
Alignment:
Q  60 agttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  25561792 agttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 25561736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 11348491 - 11348418
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| |||||||||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||||||||    
T  11348491 tgttgtgtgcaattgtgagttatatgttctacatcagataaaatagtggaggttgaacactttataagtgagag 11348418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 28034222 - 28034298
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    |||||| ||||| ||||| ||||||||||| |||| |||| |||||||||||||||||| |||||||||||||||||    
T  28034222 tgttgtgtgcaagtgtgaattatatgtcccgcatcggatagaaaagtggaggttgaacactttataagtgagagaac 28034298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 15841134 - 15841074
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  15841134 tgtgaattatatgtcccatatcagatagaaaagtggaggctgaacattttataagtgagag 15841074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 1731810 - 1731744
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataa 109  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||  ||||||||||| ||||||    
T  1731810 tgttgtgtgcaaatgtgagttatatgtcccacatcagataaaacagtaaaggttgaacatcttataa 1731744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 44620654 - 44620726
Alignment:
Q  44 gttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| ||||| |||||||||||||||||||||| ||| ||| ||| ||||||||||| ||||||||| ||||    
T  44620654 gttgtgtgcaagtgtgagttatatgtcccacatcggatgaaatagtagaggttgaacactttataagtaagag 44620726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 54017751 - 54017685
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| ||||||||||||||||||| |||||||||| |||  ||||||||||| |||||||| ||||    
T  54017751 tgcaagtgtgagttatatgtcccacgtcagataaaatagtaaaggttgaacatcttataagtaagag 54017685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 3244614 - 3244541
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||||||| |||||| |||| ||||||  ||||||||||| |||||||| ||||    
T  3244614 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacatcttataagtaagag 3244541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 25483329 - 25483402
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||| |||||||| ||||    
T  25483329 tgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacatcttataagtaagag 25483402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 49302910 - 49302963
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataa 109  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||| ||||||    
T  49302910 tgtgagttatatgtcccacatcaaataaaaaagtaaaggttgaacatcttataa 49302963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 52884880 - 52884953
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  52884880 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 52884953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 52884688 - 52884756
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  ||||||||    
T  52884688 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagt 52884756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 2740692 - 2740766
Alignment:
Q  42 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||| ||||| |||||||||||||||||||||| |||| || |||  ||||||||||  |||||||| ||||    
T  2740692 atgttgtgtgcaagtgtgagttatatgtcccacatcggatagaacagtaaaggttgaacaccttataagtaagag 2740766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 50002419 - 50002509
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 133  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||| |||  |||||||||| ||| ||||| |||| || ||| |||| ||||    
T  50002419 tgttgtttgcaagtgtgagttatatgtctcacatcggataaaagagtaaaggttgaacactttttaagtaagaggacccataaatccattg 50002509  T

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Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 3341121 - 3341194
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||||||||  ||||||| |||  ||||| |||| ||||||||| ||||    
T  3341121 tgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttaaacactttataagtaagag 3341194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 4390264 - 4390191
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||| || ||||||||||||||||| |||  ||||||||||  |||||||| ||||    
T  4390264 tgttgtgtgcaagtgtgagttacatatcccacatcagataaaagagtaaaggttgaacaccttataagtaagag 4390191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 10245913 - 10245986
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||||| |||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  10245913 tgttgtgtgcaagtgtgagttatatgccccacatcggataaaagagtaaaggttgaacaccttataagtaagag 10245986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 39404391 - 39404464
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| | ||| |||||||||||||||||||||||||||||| |||  |||| |||||  |||||||| ||||    
T  39404391 tgttgtgtacaagtgtgagttatatgtcccacatcagataaaagagtaaaggtggaacaccttataagtaagag 39404464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 12197371 - 12197447
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    |||||| ||||| ||||||||||| ||||||||||| ||| ||||||| ||||| || | |||||||| || |||||    
T  12197371 tgttgtgtgcaagtgtgagttataggtcccacatcaaatagaaaagtgaaggttcaatactttataagcgaaagaac 12197447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 15841510 - 15841458
Alignment:
Q  64 atatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||| ||||||| ||| |||||||||||||||||| ||| ||||||||||    
T  15841510 atatgtctcacatcaaatagaaaagtggaggttgaacactttgtaagtgagag 15841458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 16888971 - 16888903
Alignment:
Q  51 gcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    |||| |||||||||||||||||||||| |||| ||||||  |||||||| |  |||||||| |||||||    
T  16888971 gcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaataccttataagtaagagaac 16888903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 22183427 - 22183359
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    |||||| ||||| |||||||||||| ||||||||| ||||||| |||  | |||||||| |||||||||    
T  22183427 tgttgtgtgcaagtgtgagttatatatcccacatcggataaaagagtaaatgttgaacaatttataagt 22183359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 23557022 - 23556954
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaa 118  Q
    ||||| ||||||||| ||||   ||||| |||| |||||||||||||||||||||||||| | ||||||    
T  23557022 tgcaagtgtgagttaaatgttttacatcggatagaaaagtggaggttgaacattttataaataagagaa 23556954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 20826223 - 20826286
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    |||||||||||||||||||||| ||||||| |||  | ||||||||  |||||||| |||||||    
T  20826223 tgtgagttatatgtcccacatcggataaaatagtaaaagttgaacacgttataagtaagagaac 20826286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 39793023 - 39792956
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataag 110  Q
    |||||| | ||| ||||||||||||||||||||||||||| ||||||  | ||||||||  |||||||    
T  39793023 tgttgtgtacaagtgtgagttatatgtcccacatcagatagaaaagtaaatgttgaacaccttataag 39792956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 2741071 - 2741137
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| ||||||||||||||||||||||||||| || |||  |||||||| |  |||||||| ||||    
T  2741071 tgcaagtgtgagttatatgtcccacatcagatagaatagtaaaggttgaataccttataagtaagag 2741137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 6975612 - 6975546
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| ||||||||||||||| |||||| ||||||| |||  |||||||| || |||||||| ||||    
T  6975612 tgcaaatgtgagttatatgtctcacatccgataaaatagtaaaggttgaatatcttataagtaagag 6975546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 115
Target Start/End: Complemental strand, 39099879 - 39099845
Alignment:
Q  81 taaaaaagtggaggttgaacattttataagtgaga 115  Q
    ||||||||||||||||||||||||||||| |||||    
T  39099879 taaaaaagtggaggttgaacattttataactgaga 39099845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 41707627 - 41707569
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  41707627 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaaca 41707569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 4955480 - 4955407
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||||||| || ||| ||||||| |||  ||||||||||  |||||||| ||||    
T  4955480 tgttgtgtgcaagtgtgagttatatgtctcatatcggataaaatagttaaggttgaacaccttataagtaagag 4955407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 43174499 - 43174580
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaa-agtggaggttgaacattttataagtgagagaacacat 123  Q
    |||||| | ||| ||||||||||||| | ||||||||||||||| |||  ||||||||||  |||||||| |||| ||||||    
T  43174499 tgttgtgtacaagtgtgagttatatgccacacatcagataaaaagagtaaaggttgaacaccttataagtaagaggacacat 43174580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 49076611 - 49076538
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||| ||| ||| ||||||| |||  ||||||||||  |||||||| ||||    
T  49076611 tgttgtgtgcaagtgtgagttatatgtaccatatcggataaaacagtaaaggttgaacaccttataagtaagag 49076538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 760195 - 760255
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||||||||||||||||||  ||| |||| || |||||||  | ||||||||||||||    
T  760195 tgtgagttatatgtcccacatcgaatagaaaaatgaaggttgagaactttataagtgagag 760255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 3700358 - 3700426
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    |||||| ||||| |||||||||||||||| ||||| ||||||| |||  | ||||||||  ||||||||    
T  3700358 tgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaatgttgaacaccttataagt 3700426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 50459727 - 50459787
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||||| ||||||| | ||||| |||  ||||||||||| |||||||| ||||    
T  50459727 tgtgagttatatgttccacatcggttaaaagagtaaaggttgaacatcttataagtaagag 50459787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 54343147 - 54343091
Alignment:
Q  60 agttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  54343147 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 54343091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 33561617 - 33561543
Alignment:
Q  42 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||| ||||| |||||||||||||| |||||||||||| ||||||||||||| |||| ||||||||||||||    
T  33561617 atgttgtgtgcaagtgtgagttatatgttccacatcagatagaaaagtggaggttaaacactttataagtgagag 33561543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 33953936 - 33953863
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||| ||||||||||||||| |||||||||||||||||| | ||||||||||||    
T  33953936 tgttgtgtgcaaatgtgagttataagtcccacatcagatagaaaagtggaggttgaacactatataagtgagag 33953863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 962590 - 962664
Alignment:
Q  42 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||  ||||||||||  |||||||||||||    
T  962590 atgttgtatgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagag 962664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 29873702 - 29873633
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtg 112  Q
    |||||| |||||  ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  29873702 tgttgtgtgcaagggtgtgttacatgtcccacatcagatagaaaagtggaggttgaacattttataagtg 29873633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 7598609 - 7598675
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||||||||||  |||||||| ||||    
T  7598609 tgcaagtgtgagttatatgtcccacatcagataaaaaagtaaaggttgaacaccttataagtaagag 7598675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 33954426 - 33954360
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataa 109  Q
    |||||| ||||| ||||||||||||||||||||||||||| |||||| |||||| |||||| |||||    
T  33954426 tgttgtgtgcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttaaacattatataa 33954360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 29874175 - 29874122
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataa 109  Q
    |||| |||||||||||||||||||||| |||||||||||||||||| |||||||    
T  29874175 tgtgtgttatatgtcccacatcagatagaaaagtggaggttgaacactttataa 29874122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 30323457 - 30323530
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||| ||||||||||||| |||||||| |||| ||||||||||||| |||| |||||||||    
T  30323457 tgttgtgtgcaagtgtgtgttatatgtcccaaatcagatagaaaattggaggttgaacactttagaagtgagag 30323530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 42514642 - 42514715
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||| |||||||||||||||| |||||||||| ||||||  ||||||||||  |||||||| ||||    
T  42514642 tgttgtatgcaagtgtgagttatatgtcctacatcagatagaaaagtaaaggttgaacaccttataagtaagag 42514715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 40733523 - 40733583
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||  |||||||| ||||    
T  40733523 tgtgagttatatgtcccacatcagataaaaaagtaaatgttgaacaccttataagtaagag 40733583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 41678534 - 41678459
Alignment:
Q  43 tgttgtatgcaattgtgagttatat--gtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||||  ||| ||||||||||| ||||| ||||||| |||| ||||||||||||||    
T  41678534 tgttgtgtgcaagtgtgagttatatatgtctcacatcagatagaaaaggggaggttaaacactttataagtgagag 41678459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 31468911 - 31468844
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataag 110  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  |||||||| || |||||||    
T  31468911 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaatatcttataag 31468844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 5543156 - 5543090
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  5543156 tgcaagtgtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagag 5543090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 36178763 - 36178697
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  36178763 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 36178697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 36785728 - 36785670
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  36785728 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 36785670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 37106188 - 37106254
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  37106188 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 37106254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 16590880 - 16590925
Alignment:
Q  42 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaa 87  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  16590880 atgttgtgtgcaagtgtgagttatatgtcccacatcaaataaaaaa 16590925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 28254402 - 28254329
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||| | ||||| |||||||||||||||| |||| ||||||  ||||||||||| |||||||| ||||    
T  28254402 tgttgtgtgccagtgtgacttatatgtcccacatcggatagaaaagtaaaggttgaacatcttataagtaagag 28254329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 28531479 - 28531406
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||||||||| |||| |||||   ||||||||||  |||||||| ||||    
T  28531479 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagcaaaggttgaacaccttataagtaagag 28531406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 30313171 - 30313243
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| |||||  ||| |||||||||| |||||| |||| ||||||||||||||||||  |||||||||||||    
T  30313171 tgttgtgtgcaagcgtgtgttatatgtctcacatcggatagaaaagtggaggttgaaca-cttataagtgagag 30313243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 37632762 - 37632689
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||| ||||| ||||||| |||  |||||  ||||||||||||| ||||    
T  37632762 tgttgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggtttgacattttataagtaagag 37632689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 38796383 - 38796310
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  | ||||||||  |||||||| ||||    
T  38796383 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataagtaagag 38796310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 38796785 - 38796712
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| | |  ||||||||||  |||||||| ||||    
T  38796785 tgttgtgtgcaagtgtgagttatatgtcccacatctgataaaacaataaaggttgaacaccttataagtaagag 38796712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 6421391 - 6421451
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  6421391 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 6421451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 40679794 - 40679718
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    |||||| ||||| |||||||||||||||||| ||| |||| ||||||   |||||||||  |||||||| |||||||    
T  40679794 tgttgtgtgcaaatgtgagttatatgtcccatatcggatagaaaagtaagggttgaacaccttataagtaagagaac 40679718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 35580886 - 35580815
Alignment:
Q  45 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||| ||||| |||||||||||||||||||||| ||||||| | |  | ||||||||  |||||||||||||    
T  35580886 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaacaataaatgttgaacaccttataagtgagag 35580815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 6712969 - 6713059
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 133  Q
    |||||||| ||| ||||||||||||||| |||||| ||||||| |||  | ||||||||  |||||||| |||| || ||| || ||||||    
T  6712969 tgttgtatacaagtgtgagttatatgtctcacatcggataaaacagtaaatgttgaacaccttataagtaagaggacccataaacctattg 6713059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 12529193 - 12529151
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaa 85  Q
    |||||||||||| |||||||||||||||| |||||| ||||||    
T  12529193 tgttgtatgcaagtgtgagttatatgtcctacatcaaataaaa 12529151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 14745825 - 14745759
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||  ||||||| |||  ||||||||||  |||||||| ||||    
T  14745825 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagag 14745759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 16542442 - 16542500
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    |||||| ||||| ||||||||||| |||||||||| ||||||| |||  ||||||||||    
T  16542442 tgttgtgtgcaagtgtgagttataagtcccacatcggataaaatagtaaaggttgaaca 16542500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 41283633 - 41283567
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||| ||| ||||||| |||  ||||||||||  |||||||| ||||    
T  41283633 tgcaagtgtgagttatatgtcccatatcggataaaatagtaaaggttgaacaccttataagtaagag 41283567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 15880256 - 15880329
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| | ||| |||||||||||||| ||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  15880256 tgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagag 15880329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 29676896 - 29676969
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||  |||||||||||||||||||||| ||||||| |||  ||||| ||||  ||||| |||||||    
T  29676896 tgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggtttaacaccttataggtgagag 29676969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 37105924 - 37105985
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    ||||| ||||||||||||||||||||||  |||||| |||  ||||||||||  ||||||||    
T  37105924 tgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacaccttataagt 37105985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 116
Target Start/End: Original strand, 2336658 - 2336690
Alignment:
Q  84 aaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||||||||| ||||||||||||||    
T  2336658 aaaagtggaggttgaacactttataagtgagag 2336690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 34481274 - 34481334
Alignment:
Q  58 tgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaa 118  Q
    |||||||||| || ||| || |||| |||||||||||||||| ||||||||| ||| ||||    
T  34481274 tgagttatatttctcacgtcggatataaaagtggaggttgaatattttataaatgatagaa 34481334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 43443147 - 43443103
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaa 87  Q
    |||||| ||||| ||| ||||||||||||||||||||||| ||||    
T  43443147 tgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaa 43443103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 7e-18; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 43 - 133
Target Start/End: Complemental strand, 12662817 - 12662727
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 133  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  |||||||||||||||||||| ||| ||| ||| |||| ||||    
T  12662817 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacattttataagtaagaaaacccataaatccattg 12662727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 31509616 - 31509689
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||||||| |||||| |||| ||||||||||||||| || ||||||||||||||    
T  31509616 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagag 31509689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 36522402 - 36522329
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||||| || ||||||||||||||| |||||  |||| |||| |||| |||||||||||||||||||||||    
T  36522402 tgttgtatgaaagtgtgagttatatgtctcacattggatagaaaaatggaagttgaacattttataagtgagag 36522329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 41170637 - 41170700
Alignment:
Q  53 aattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||||||||||||||||||||| ||||||| |||  ||||||||||| |||||||| ||||    
T  41170637 aattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagag 41170700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 36522053 - 36522003
Alignment:
Q  51 gcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    |||| ||||||||||||||||||||||||||| |||||| |||||||||||    
T  36522053 gcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttgaaca 36522003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 15370092 - 15370165
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||||||||||||||  |||||| |||  ||||||||||| |||||||| ||||    
T  15370092 tgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacatcttataagtaagag 15370165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 36492382 - 36492309
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  36492382 tgttgtttgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 36492309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 18603272 - 18603212
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||    
T  18603272 tgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagag 18603212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 35150002 - 35150074
Alignment:
Q  45 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagaga 117  Q
    |||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| |||||    
T  35150002 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtcaaggttgaacaccttataagtaagaga 35150074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 36568732 - 36568660
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 115  Q
    |||||| ||||| |||||||||||||||||||||| |||| ||||||  | ||||||||  ||||||||||||    
T  36568732 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgaga 36568660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 26074311 - 26074253
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    |||||| ||||| ||||||||||||||| |||||| |||||||||||  ||||||||||    
T  26074311 tgttgtgtgcaagtgtgagttatatgtcacacatcggataaaaaagtaaaggttgaaca 26074253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 1028682 - 1028609
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| | ||| |||||||||||||||||||||| |||| ||||||  ||| |||||| ||||||||| ||||    
T  1028682 tgttgtgtacaagtgtgagttatatgtcccacatcggatagaaaagtaaaggatgaacactttataagtaagag 1028609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 13415925 - 13415852
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||||||||| ||||||  |||  ||||||||||  |||||||| ||||    
T  13415925 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaattagtaaaggttgaacaccttataagtaagag 13415852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 35914857 - 35914910
Alignment:
Q  58 tgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    ||||||||||||| |||||| ||||||| |||  ||||||||||||||||||||    
T  35914857 tgagttatatgtcacacatcggataaaagagtaaaggttgaacattttataagt 35914910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 36527248 - 36527199
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtgga 92  Q
    |||||| | ||| ||||||||||||||||||||||||||| |||||||||    
T  36527248 tgttgtgtacaagtgtgagttatatgtcccacatcagatagaaaagtgga 36527199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 299490 - 299550
Alignment:
Q  51 gcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    |||| |||||||||||||||||||||| ||||||| |||  ||||||||||  ||||||||    
T  299490 gcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagt 299550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 31509745 - 31509797
Alignment:
Q  64 atatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||| |||||| |||| ||||||||||||||| || ||||||||||||||    
T  31509745 atatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagag 31509797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 32487394 - 32487445
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  32487394 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 32487445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 38427554 - 38427609
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    |||||||||||||||||||||  |||| ||||||  ||||||||||| ||||||||    
T  38427554 tgtgagttatatgtcccacattggatagaaaagtaaaggttgaacatcttataagt 38427609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 300965 - 301027
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaa 118  Q
    |||| ||||||||||||||||||||||||| |||  |||||||| |  |||||||| ||||||    
T  300965 tgtgggttatatgtcccacatcagataaaacagtaaaggttgaataccttataagtaagagaa 301027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 9498812 - 9498746
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| ||||||||||||||| ||||||||||| || |||  ||||||||||  |||||||| ||||    
T  9498812 tgcaaatgtgagttatatgtctcacatcagatagaatagtaaaggttgaacaccttataagtaagag 9498746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 26074947 - 26074889
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  26074947 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaaca 26074889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 40296473 - 40296407
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||| ||||||| ||   ||||||||||  |||||||| ||||    
T  40296473 tgcaagtgtgagttatatgtcccacatcggataaaatagaaaaggttgaacaccttataagtaagag 40296407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 6224189 - 6224262
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| | ||| ||||||||||||||||||| || ||||||| |||  ||||||||||  |||||||| ||||    
T  6224189 tgttgtgtacaagtgtgagttatatgtcccacttcggataaaagagtaaaggttgaacaccttataagtaagag 6224262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 24489369 - 24489324
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaag 88  Q
    |||||| | ||| ||||||||||||||||||||||||||| |||||    
T  24489369 tgttgtgttcaagtgtgagttatatgtcccacatcagatagaaaag 24489324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 41632775 - 41632848
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||| ||||||||||| |||||| |||| ||||||  ||||||||||  |||||||| ||||    
T  41632775 tgttgtgtgcaagtgtaagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagag 41632848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 26074324 - 26074384
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||||||||||||||||||||||| |||| |  || |||||||  |||||||| ||||    
T  26074324 tgtgagttatatgtcccacatcagatagaaaactaaagattgaacaccttataagtaagag 26074384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 8327888 - 8327973
Alignment:
Q  34 tgaaattcatgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| ||||||| |||  ||| |||| || |||||||| |||||||    
T  8327888 tgaaattcatgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggatgaatatcttataagtaagagaac 8327973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 39336392 - 39336321
Alignment:
Q  45 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||| ||||| |||||||||||||||||||||| |||| |||  ||||||||||||| ||||||||||||||    
T  39336392 ttgtgtgcaagtgtgagttatatgtcccacatcggatagaaagttggaggttgaacactttataagtgagag 39336321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 43346956 - 43346880
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    |||||| | ||| |||||||||||||||||||||||||||||| |||  ||||||||||  |||||||| |||||||    
T  43346956 tgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagagaac 43346880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 33803418 - 33803359
Alignment:
Q  42 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    ||||||| |||||||||||||||||||||||||||| ||||||| |||  ||||||||||    
T  33803418 atgttgtgtgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 33803359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 39914245 - 39914303
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    |||||| ||||| ||||||||||||||| |||||||||||||| ||| |||||||||||    
T  39914245 tgttgtgtgcaagtgtgagttatatgtctcacatcagataaaacagtagaggttgaaca 39914303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 33175830 - 33175753
Alignment:
Q  42 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    ||||||| | ||| ||||||||||||||| ||||||||||| ||||||  ||||||||||  |||||||| |||||||    
T  33175830 atgttgtgtacaagtgtgagttatatgtctcacatcagatagaaaagtaaaggttgaacaccttataagtaagagaac 33175753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 47965080 - 47965007
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||||||   ||||| |||| ||||||||||||| |||||| ||||||||||||    
T  47965080 tgttgtgtgcaagtgtgagttatatgttttacatcggatagaaaagtggaggttaaacattatataagtgagag 47965007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 54451342 - 54451269
Alignment:
Q  42 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 115  Q
    ||||||| ||||  ||||||||||||||||||||||| | | |||| ||||||||||||| ||||| |||||||    
T  54451342 atgttgtgtgcatatgtgagttatatgtcccacatcaaaaagaaaaatggaggttgaacactttatgagtgaga 54451269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 25991409 - 25991472
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    ||||||| ||||||||||||||| ||||| ||||  | ||| ||||||||||||||||||||||    
T  25991409 tgtgagtaatatgtcccacatcaaataaacaagttaatgttaaacattttataagtgagagaac 25991472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 36986100 - 36986037
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    ||||||||||||||||||||||  ||| ||||||| |||||||  | |||||||||||||||||    
T  36986100 tgtgagttatatgtcccacatcgaatagaaaagtgaaggttgagaactttataagtgagagaac 36986037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 37011539 - 37011476
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    ||||||||||||||||||||||  ||| ||||||| |||||||  | |||||||||||||||||    
T  37011539 tgtgagttatatgtcccacatcgaatagaaaagtgaaggttgagaactttataagtgagagaac 37011476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 29644744 - 29644670
Alignment:
Q  45 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    |||| ||||| |||||||||||||||||||||| ||| ||| |||  ||||||||||  |||||||| |||||||    
T  29644744 ttgtgtgcaagtgtgagttatatgtcccacatcggattaaagagtaaaggttgaacaccttataagtaagagaac 29644670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 133
Target Start/End: Complemental strand, 42342553 - 42342463
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 133  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||| ||||  |||||||| |||| || ||| |||| ||||    
T  42342553 tgttgtgtgcaagtgtgagttatatgtcccacatccgataaaagagtaaaggttcaacaccttataagtaagaggacccataaatccattg 42342463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 133
Target Start/End: Complemental strand, 47964683 - 47964593
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 133  Q
    |||||| ||||| |||||||| |||||||| |||| |||| ||| |||||||||||||  | |||||||||||| || ||| || ||||||    
T  47964683 tgttgtgtgcaagtgtgagttgtatgtcccgcatcggatagaaatgtggaggttgaacgctatataagtgagaggacccataaacctattg 47964593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 2299969 - 2300026
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaac 100  Q
    |||||| ||||| |||| |||||||||||||| ||||||| |||||||||||| ||||    
T  2299969 tgttgtgtgcaagtgtgggttatatgtcccacgtcagatagaaaagtggaggtagaac 2300026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 15773185 - 15773258
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||||||||||||||  |||||| |||  | ||||||||| |||||||| ||||    
T  15773185 tgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaaagttgaacatcttataagtaagag 15773258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 25739590 - 25739517
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  | |||||||||  ||||||| ||||    
T  25739590 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaagttgaacatcatataagtaagag 25739517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 31190010 - 31190083
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||| |||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  31190010 tgttgtgtgcaagtgtgagtgatatgtcccacatcggataaaagagtaaaggttgaacaccttataagttagag 31190083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 35946515 - 35946588
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  35946515 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagag 35946588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 54017981 - 54017908
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||| ||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  54017981 tgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagag 54017908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 46546491 - 46546415
Alignment:
Q  42 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaa 118  Q
    ||||||| || || |||||||||||||||| ||||  |||  ||| |||||||||||||| ||||||||| ||||||    
T  46546491 atgttgtgtgtaagtgtgagttatatgtcctacattggattgaaatgtggaggttgaacactttataagttagagaa 46546415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 50612610 - 50612530
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatcta 130  Q
    ||||| |||||||||||||||||||||| ||||||| |||  || |||||||  |||||||| |||| || ||| ||||||    
T  50612610 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaagattgaacaccttataagtaagaggactcataaatcta 50612530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 12747917 - 12747870
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtg 90  Q
    |||||| ||||| |||||||||||||||||||||| |||| |||||||    
T  12747917 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtg 12747870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 22304246 - 22304297
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  22304246 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 22304297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 116
Target Start/End: Complemental strand, 30399701 - 30399666
Alignment:
Q  81 taaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||| ||||||||||||||||||||||||||||    
T  30399701 taaaaaattggaggttgaacattttataagtgagag 30399666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 53577357 - 53577416
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacat 102  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||| |||  |||||||||||    
T  53577357 tgttgtgtgcaagtgtgagttatatgtcacacatcggataaaacagtaaaggttgaacat 53577416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Original strand, 2417351 - 2417385
Alignment:
Q  84 aaaagtggaggttgaacattttataagtgagagaa 118  Q
    |||||||||| ||||||||||||||||||||||||    
T  2417351 aaaagtggagattgaacattttataagtgagagaa 2417385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 21832501 - 21832435
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||  |||| ||||||  ||||||||||  |||||||| ||||    
T  21832501 tgcaagtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacaccttataagtaagag 21832435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 22304113 - 22304071
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaa 85  Q
    |||||| | ||| ||||||||||||||||||||||||||||||    
T  22304113 tgttgtgtacaagtgtgagttatatgtcccacatcagataaaa 22304071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 25317150 - 25317224
Alignment:
Q  42 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||| || |||||||||| ||||||||| |||||  ||||||||||||||| || ||| ||| ||||||    
T  25317150 atgttgcatggaagtgtgagttatgtgtcccacaccagatggaaaagtggaggttgagcactttgtaactgagag 25317224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 25755387 - 25755477
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 133  Q
    |||||| | ||| ||||||||||||||| |||||||||||||| |||  |||||||| |  |||||||| |||| || ||| |||| ||||    
T  25755387 tgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaggttgaataccttataagtaagaggactcataaatccattg 25755477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 43346643 - 43346701
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    |||||| ||||| |||||||| ||||||||||||| ||||||| |||  ||||||||||    
T  43346643 tgttgtgtgcaagtgtgagttgtatgtcccacatcggataaaatagtaaaggttgaaca 43346701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 52634669 - 52634743
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagaga 117  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  |||||||||   |||||||| |||||    
T  52634669 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacgccttataagtaagaga 52634743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 29645067 - 29644994
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||| |||||||||||||||||| ||||||| |||  ||||| ||||  |||||||| ||||    
T  29645067 tgttgtgtgcaagtgtaagttatatgtcccacatcggataaaagagtaaaggttaaacaccttataagtaagag 29644994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 53118131 - 53118066
Alignment:
Q  51 gcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||| |||||||||||||| ||| ||| ||||||| |||  ||||||||||  |||||||||||||    
T  53118131 gcaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtgagag 53118066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 11661541 - 11661601
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||||||||||||| ||||||| |||   |||| ||||| |||||||| ||||    
T  11661541 tgtgagttatatgtcccacatcggataaaatagtaacggttaaacatcttataagtaagag 11661601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 33809173 - 33809129
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaa 87  Q
    |||||| ||||| ||| ||||||||||||||||||||||| ||||    
T  33809173 tgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaa 33809129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 6071125 - 6071197
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 115  Q
    |||||| ||||| |||||||||||||||||||||   ||| |||||||||||||||||| |||||||||||||    
T  6071125 tgttgtgtgcaagtgtgagttatatgtcccacattgaatagaaaagtggaggttgaacactttataagtgaga 6071197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 8481920 - 8481991
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 115  Q
    |||||| ||||| |||||||||||||||| |||||||||| |||||||||||||||||| ||||||| |||||    
T  8481920 tgttgtgtgcaagtgtgagttatatgtcc-acatcagatataaaagtggaggttgaacactttataaatgaga 8481991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 33605647 - 33605719
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 115  Q
    |||||| ||||| |||||| |||||||| ||||||||||| |||||||||||||||||| ||||||| |||||    
T  33605647 tgttgtgtgcaagtgtgagctatatgtctcacatcagatagaaaagtggaggttgaacactttataattgaga 33605719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 10911557 - 10911632
Alignment:
Q  42 atgttgtatgcaattgtgagttatatgtcccacatcagat-aaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||||||||  |||||||| ||||    
T  10911557 atgttgtatgcaagtgtgagttatatgtcctacatcagataaaaaaagtaaaggttgaacaccttataagtaagag 10911632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 3409259 - 3409325
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||    
T  3409259 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagag 3409325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 2580037 - 2579964
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  2580037 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacattataagtaagag 2579964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 12092647 - 12092574
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| |||||  ||| |||| |||||||||||| |||| ||||||||||||||| || ||||||||||||||    
T  12092647 tgttgtgtgcaagggtgtgttagatgtcccacatcggatagaaaagtggaggttgagcactttataagtgagag 12092574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 9062501 - 9062441
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||||||||||||| ||||||| |||  ||||||||||| |||||||| ||||    
T  9062501 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagag 9062441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 33605975 - 33606034
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataa 109  Q
    ||||| ||| ||||||||||||||||||  ||| |||||||||||||||||| |||||||    
T  33605975 tgcaaatgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 33606034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 2378126 - 2378192
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  2378126 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 2378192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 3409660 - 3409726
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||| ||||||||||||||| |||  | ||||||||| |||||||| ||||    
T  3409660 tgcaagtgtgagttatatgtaccacatcagataaaatagtaaaagttgaacatcttataagtaagag 3409726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 26544049 - 26544115
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  26544049 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacgttataagtaagag 26544115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 29518503 - 29518569
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  29518503 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 29518569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 29518920 - 29518986
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  29518920 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 29518986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 32741179 - 32741245
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  32741179 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 32741245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 16454900 - 16454968
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    |||||| | ||| |||||||||| ||||||||||||||||||| |||  ||||||||||  ||||||||    
T  16454900 tgttgtgtacaaatgtgagttatgtgtcccacatcagataaaagagtaaaggttgaacaccttataagt 16454968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 12071849 - 12071790
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataa 109  Q
    ||||| ||||||||||||||| | ||||||||| |||| ||||| ||||||| |||||||    
T  12071849 tgcaagtgtgagttatatgtctcgcatcagatagaaaaatggagtttgaacactttataa 12071790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 14748496 - 14748445
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  14748496 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 14748445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 593867 - 593801
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||| ||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  593867 tgcaagtgtgagttgtatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 593801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 35210204 - 35210270
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  35210204 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagag 35210270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 1950337 - 1950292
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  1950337 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaaca 1950292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 2578607 - 2578535
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| | ||| |||||||||||||||||||| | ||||||| |||  |||||||||| ||||||||| ||||    
T  2578607 tgttgtgtacaagtgtgagttatatgtcccaca-cggataaaagagtaaaggttgaacactttataagtaagag 2578535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 3058226 - 3058287
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    ||||| ||| |||||||||||||||||| ||||||| |||  ||||||||||  ||||||||    
T  3058226 tgcaagtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagt 3058287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 3415464 - 3415509
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    ||||||||||||||||||||||| |||||| |||  ||||||||||    
T  3415464 tgtgagttatatgtcccacatcacataaaatagtaaaggttgaaca 3415509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 16108056 - 16108129
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| | ||| |||||||||||||| ||||||||||||||| |||  | ||||||||  |||||||| ||||    
T  16108056 tgttgtgtacaagtgtgagttatatgttccacatcagataaaagagtaaatgttgaacaccttataagtaagag 16108129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 2377760 - 2377820
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||||||||||||| | ||||| |||  ||||||||||  |||||||| ||||    
T  2377760 tgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagag 2377820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 32460732 - 32460672
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||||||||||||||||||  |||||| |||  ||||||||||  |||||||| ||||    
T  32460732 tgtgagttatatgtcccacatcgtataaaatagtaaaggttgaacaccttataagtaagag 32460672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 1085781 - 1085708
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  |||||||||| ||||||||| ||||    
T  1085781 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaagag 1085708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 30245487 - 30245560
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||    
T  30245487 tgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttgaacaccttataagtaagag 30245560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 10341842 - 10341901
Alignment:
Q  60 agttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 119  Q
    ||||||||||| |||||| |||| |||||||||||||||||| |||||||||| ||||||    
T  10341842 agttatatgtctcacatcggatagaaaagtggaggttgaacactttataagtgggagaac 10341901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 36622955 - 36623021
Alignment:
Q  45 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    |||| ||||| |||||||||||||||||||||| ||||||| |||  ||||| ||||||||||||||    
T  36622955 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacattttataagt 36623021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 7517573 - 7517646
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  7517573 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 7517646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 7554018 - 7554091
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  7554018 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 7554091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 22566827 - 22566754
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||| ||||||| |||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  22566827 tgttgtatgcaagtgtgagtaatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 22566754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 133
Target Start/End: Complemental strand, 23542 - 23452
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 133  Q
    |||||| |||||||||||||||||||| ||||||| |||| || |||  ||||||||||  |||||||| |||| || ||| || ||||||    
T  23542 tgttgtgtgcaattgtgagttatatgttccacatcggatacaatagtaaaggttgaacaccttataagtaagaggacccataaacctattg 23452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 118466 - 118408
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    |||||| ||||| ||| ||||||||||||||||||||||| ||||||  ||||||||||    
T  118466 tgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaagtaaaggttgaaca 118408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 30255332 - 30255405
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||| ||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  30255332 tgttgtgtgcaagtgtgcgttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 30255405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 34218199 - 34218126
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| | ||| ||||||||||||||| |||||| |||||||||||  | ||||||||  |||||||||||||    
T  34218199 tgttgtgtacaaatgtgagttatatgtctcacatcggataaaaaagtaaatgttgaacaccttataagtgagag 34218126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 40094559 - 40094502
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaac 100  Q
    |||||| ||||| |||||||||||||||| ||||||||||||| |||  |||||||||    
T  40094559 tgttgtgtgcaagtgtgagttatatgtccaacatcagataaaagagtaaaggttgaac 40094502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 45434629 - 45434702
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| | ||| ||| |||||||||||||||||| |||||||||||  ||||||||||  |||||||| ||||    
T  45434629 tgttgtgtacaagtgtaagttatatgtcccacatcggataaaaaagtaaaggttgaacaccttataagtaagag 45434702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 43241488 - 43241556
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    |||||| ||||| |||||||||||||| ||||||| ||||||||| |  ||||||||||  ||||||||    
T  43241488 tgttgtgtgcaagtgtgagttatatgttccacatcggataaaaaaataaaggttgaacaccttataagt 43241556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 14681510 - 14681561
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    ||||| ||| |||||||||||||||||||||||||| |||  ||||||||||    
T  14681510 tgcaagtgtaagttatatgtcccacatcagataaaatagtaaaggttgaaca 14681561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 37345909 - 37345983
Alignment:
Q  43 tgttgtatgcaattgtgagttatat--gtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 115  Q
    |||||| ||||| ||||||||||||  |||  | ||| |||| ||||||||||||| ||||||||||||||||||    
T  37345909 tgttgtgtgcaagtgtgagttatatatgtcatatatctgatagaaaagtggaggttaaacattttataagtgaga 37345983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 40230454 - 40230383
Alignment:
Q  45 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||| ||||| ||| ||||||||||||||||||  ||||||||||  | ||||||||| |||||||| ||||    
T  40230454 ttgtgtgcaagtgtaagttatatgtcccacatcgaataaaaaagtaaaagttgaacatcttataagtaagag 40230383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 30244694 - 30244752
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    |||||| ||||| |||||||||||||||||||||  ||||||| |||  ||||||||||    
T  30244694 tgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaaca 30244752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 37533168 - 37533102
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||  ||||||| |||  ||||||||||  |||||||| ||||    
T  37533168 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagag 37533102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 45433234 - 45433324
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 133  Q
    |||||| | ||| |||||||||||||  ||||||| ||||||| |||  ||||||||||  |||||||| ||||||| ||| || ||||||    
T  45433234 tgttgtgtacaagtgtgagttatatgatccacatcggataaaagagtaaaggttgaacaccttataagtaagagaactcataaacctattg 45433324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 16569189 - 16569262
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||| ||||||||||||||| |||||| |||| || |||  |||||||| |  |||||||| ||||    
T  16569189 tgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagag 16569262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 16596473 - 16596400
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||| ||||||||||||||| |||||| |||| || |||  |||||||| |  |||||||| ||||    
T  16596473 tgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagag 16596400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 22567203 - 22567131
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||| ||||||| |||||| ||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  22567203 tgttgtatgcaagtgtgagtaatatgt-ccacatcggataaaagagtaaaggttgaacaccttataagtaagag 22567131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 29157565 - 29157626
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    ||||| |||||||||||||||||||| | ||||||| |||  ||||||||||  ||||||||    
T  29157565 tgcaagtgtgagttatatgtcccacaccggataaaatagtaaaggttgaacaccttataagt 29157626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 30244263 - 30244336
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  |||||||| |  |||||||| ||||    
T  30244263 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaagaccttataagtaagag 30244336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 36109082 - 36109009
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||| || |||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  36109082 tgttgtgtgcaagtgtgagttatatttctcacatcggataaaagagtaaaggttgaacaccttataagtaagag 36109009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 36534949 - 36534876
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||| | ||||||||||||| || ||||||| ||| |||||||||||  |||||||| ||||    
T  36534949 tgttgtgtgcaagtgtaacttatatgtcccacctcggataaaacagtagaggttgaacaccttataagtaagag 36534876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 41910759 - 41910686
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| || || |||||||||||||||||||||| ||||||| |||  |||||||| |  |||||| ||||||    
T  41910759 tgttgtgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaataccttataactgagag 41910686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 11845198 - 11845274
Alignment:
Q  57 gtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 133  Q
    ||||||||||||| ||||||| ||||||| |||  ||||||||||  |||||||| |||| || ||| |||| ||||    
T  11845198 gtgagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattg 11845274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 24177428 - 24177496
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    |||||| ||||| | |||||||||||||||||||| ||||||| |||  ||| ||||||  ||||||||    
T  24177428 tgttgtgtgcaagtatgagttatatgtcccacatcggataaaagagtaaaggctgaacaccttataagt 24177496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 30245070 - 30245138
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 111  Q
    |||||| | ||| |||||||||||||| ||||||| ||||||| |||  ||||||||||  ||||||||    
T  30245070 tgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagt 30245138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 47129101 - 47129161
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||||||||||||| |||||| ||||||| |||  ||||||||| | |||||||| ||||    
T  47129101 tgtgagttatatgtctcacatcggataaaatagtaaaggttgaacctcttataagtaagag 47129161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 39831 - 39903
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 115  Q
    |||||| | ||| |||||||||||||||||||||| |||| |||||||| ||||| ||  |||||||||||||    
T  39831 tgttgtgttcaagtgtgagttatatgtcccacatcggatagaaaagtggtggttggactctttataagtgaga 39903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 300 - 234
Alignment:
Q  50 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  300 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 666 - 606
Alignment:
Q  56 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||||||||||||||||||| | ||||| |||  ||||||||||  |||||||| ||||    
T  666 tgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagag 606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 17621 - 17563
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 101  Q
    |||||| ||||| ||||||||||||||| |||||||||||||| |||  ||||||||||    
T  17621 tgttgtgtgcaagtgtgagttatatgtcacacatcagataaaatagtaaaggttgaaca 17563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 5389 - 5462
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||||| ||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  5389 tgttgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagag 5462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 5770 - 5843
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  5770 tgttgtgtgcaagtgtgagttatatgtcgcacatcggataaaatagtaaaggttgaacaccttataagtaagag 5843  T

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Target: scaffold0391 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 3150 - 3091
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacat 102  Q
    |||||| ||||  |||||||||||||||||||||| ||||||| |||  |||||||||||    
T  3150 tgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacat 3091  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 5350 - 5423
Alignment:
Q  43 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 116  Q
    |||||| ||||| |||||||||||||| ||||||| |||| || |||  ||||||||||  |||||||| ||||    
T  5350 tgttgtgtgcaagtgtgagttatatgttccacatcggatagaacagtaaaggttgaacaccttataagtaagag 5423  T

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