View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10466_high_28 (Length: 364)

Name: NF10466_high_28
Description: NF10466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10466_high_28
NF10466_high_28
[»] chr2 (7 HSPs)
chr2 (147-354)||(39439648-39439855)
chr2 (150-353)||(19814980-19815183)
chr2 (1-86)||(39439502-39439587)
chr2 (269-354)||(21416157-21416242)
chr2 (269-354)||(24256987-24257072)
chr2 (278-349)||(39437076-39437147)
chr2 (269-354)||(2878022-2878107)
[»] chr5 (3 HSPs)
chr5 (147-354)||(14188474-14188681)
chr5 (277-354)||(14185927-14186003)
chr5 (1-30)||(14188283-14188312)
[»] scaffold0122 (2 HSPs)
scaffold0122 (147-354)||(31295-31502)
scaffold0122 (1-30)||(31103-31132)
[»] chr6 (3 HSPs)
chr6 (230-354)||(16013081-16013205)
chr6 (269-354)||(4214255-4214340)
chr6 (269-354)||(24201051-24201136)
[»] chr3 (5 HSPs)
chr3 (230-322)||(10014737-10014829)
chr3 (230-322)||(10115378-10115470)
chr3 (230-322)||(10252482-10252574)
chr3 (253-320)||(57547-57614)
chr3 (269-354)||(37798771-37798856)
[»] chr4 (4 HSPs)
chr4 (269-354)||(49715116-49715201)
chr4 (156-229)||(39096695-39096767)
chr4 (162-229)||(39095880-39095946)
chr4 (156-218)||(23176344-23176403)
[»] chr8 (2 HSPs)
chr8 (253-320)||(19194755-19194822)
chr8 (269-354)||(21107342-21107427)
[»] chr1 (3 HSPs)
chr1 (269-354)||(16651592-16651677)
chr1 (269-322)||(2347232-2347285)
chr1 (184-229)||(15911226-15911270)
[»] scaffold0029 (1 HSPs)
scaffold0029 (278-354)||(130948-131024)
[»] scaffold0002 (1 HSPs)
scaffold0002 (278-354)||(308765-308841)
[»] scaffold0583 (1 HSPs)
scaffold0583 (278-354)||(7351-7427)
[»] chr7 (1 HSPs)
chr7 (269-354)||(45116915-45117001)


Alignment Details
Target: chr2 (Bit Score: 180; Significance: 4e-97; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 147 - 354
Target Start/End: Original strand, 39439648 - 39439855
Alignment:
Q  147 atccatcgatagatccatctaatggctaatattaagtgaagaagagagaaggagacaaattttgaaggagagaatccaattcccttttcctttgcttact 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  39439648 atccatcgatagatccatctaatggctaatattaagtgaagaagagagaaggagacaaattttgaaggagaggatccaattcccttttcctttgcgtact 39439747  T
Q  247 ttttgcgtctctccattaaatcgaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgtt 346  Q
    ||||| |||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39439748 ttttgtgtctctccattaaatcaaaatgacatcaaagattgacttgatctctgatatatccccttccaaagaaaaccggactatcatggttcaagtcgtt 39439847  T
Q  347 cgcctttg 354  Q
    ||||||||    
T  39439848 cgcctttg 39439855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 150 - 353
Target Start/End: Original strand, 19814980 - 19815183
Alignment:
Q  150 catcgatagatccatctaatggctaatattaagtgaagaagagagaaggagacaaattttgaaggagagaatccaattcccttttcctttgcttactttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||  ||||||    
T  19814980 catcgatagatccatctaatggctaatattaagtgaagaagagagaaggagataaattttgaaggagaggatccaattccctttttctttgcgcactttt 19815079  T
Q  250 tgcgtctctccattaaatcgaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgttcgc 349  Q
    || |||||||||||||||||||||| || ||||||||||| |||||||| ||||||||||||||||||||||   |||||||| ||||| | ||||| ||    
T  19815080 tgtgtctctccattaaatcgaaatggcctcaaagattgacatgatctctaatatatccccttccaaagaaaattggactatcagggttcgaatcgtttgc 19815179  T
Q  350 cttt 353  Q
    ||||    
T  19815180 cttt 19815183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 39439502 - 39439587
Alignment:
Q  1 tgaagaagcttccggagtagtaaaacaccgtccannnnnnngtccataccaatcgagttaagcttacatggaaaaaaccccgccca 86  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||||||||    
T  39439502 tgaagaagcttccggagtagtaaaacaccgtccatttttttgtccataccaatcgagttaagcttacaaggaaaaaaccccgccca 39439587  T

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Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 21416242 - 21416157
Alignment:
Q  269 gaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgttcgcctttg 354  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||   || ||||| ||||| |||||||||||||||    
T  21416242 gaaatggcaccaaagattgacttgatttctgatatatccccttccaaagaaaattggaatatcagggttcgagtcgttcgcctttg 21416157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 24256987 - 24257072
Alignment:
Q  269 gaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgttcgcctttg 354  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||   || ||| | ||||  |||||||||||||||    
T  24256987 gaaatgacaccaaagattgacttgatttctgatatatccccttccaaagaaaattggaatattagggtttgagtcgttcgcctttg 24257072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 278 - 349
Target Start/End: Original strand, 39437076 - 39437147
Alignment:
Q  278 ccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgttcgc 349  Q
    ||||| |||||||||| |||||||||||||||||||||| ||||| ||| ||||| ||||| ||||||||||    
T  39437076 ccaaaaattgacttgagctctgatatatccccttccaaaaaaaactagaatatcagggttcgagtcgttcgc 39437147  T

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Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 2878022 - 2878107
Alignment:
Q  269 gaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgttcgcctttg 354  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||    | ||||| ||||| |||||||||| ||||    
T  2878022 gaaatggcaccaaagattgacttgatttctgatatatccccttccaaagaaaattgaaatatcagggttcgagtcgttcgcttttg 2878107  T

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Target: chr5 (Bit Score: 164; Significance: 1e-87; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 147 - 354
Target Start/End: Original strand, 14188474 - 14188681
Alignment:
Q  147 atccatcgatagatccatctaatggctaatattaagtgaagaagagagaaggagacaaattttgaaggagagaatccaattcccttttcctttgcttact 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||| |||||| ||||    
T  14188474 atccatcgatagatccatctaatggctaatattaagtgaagaagagaaaaggagacaaattttgaaggaaaggatccaattccctttttctttgcgtact 14188573  T
Q  247 ttttgcgtctctccattaaatcgaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgtt 346  Q
    ||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||    
T  14188574 ttttgtgtctcttcattaaatcgaaatgacctcaaagattgacttgatctctgatatatccccttccaaagaaaaccggactatcatcgttcgagtcgtt 14188673  T
Q  347 cgcctttg 354  Q
    ||||||||    
T  14188674 cgcctttg 14188681  T

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Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 14185927 - 14186003
Alignment:
Q  277 cccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgttcgcctttg 354  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| | | ||||| ||||| |||||||||||||||    
T  14185927 cccaaagattgacttgatctctgatatat-cccttccaaagaaaactaaaatatcagggttcgagtcgttcgcctttg 14186003  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 14188283 - 14188312
Alignment:
Q  1 tgaagaagcttccggagtagtaaaacaccg 30  Q
    ||||||||||||||||||||||||||||||    
T  14188283 tgaagaagcttccggagtagtaaaacaccg 14188312  T

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Target: scaffold0122 (Bit Score: 156; Significance: 8e-83; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 147 - 354
Target Start/End: Original strand, 31295 - 31502
Alignment:
Q  147 atccatcgatagatccatctaatggctaatattaagtgaagaagagagaaggagacaaattttgaaggagagaatccaattcccttttcctttgcttact 246  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  31295 atccattgatagatccacctaatggctaatattaagtgaagaagagagaaggagacaaattttgaaggagaggatccaattccctttttctttgcgtact 31394  T
Q  247 ttttgcgtctctccattaaatcgaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgtt 346  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| ||||  |||||||    
T  31395 tttcgtgtctctccattaaatcgaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaactgaactatcagggtttgagtcgtt 31494  T
Q  347 cgcctttg 354  Q
    ||||||||    
T  31495 cgcctttg 31502  T

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Target: scaffold0122; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 31103 - 31132
Alignment:
Q  1 tgaagaagcttccggagtagtaaaacaccg 30  Q
    ||||||||||||||||||||||||||||||    
T  31103 tgaagaagcttccggagtagtaaaacaccg 31132  T

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Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 230 - 354
Target Start/End: Original strand, 16013081 - 16013205
Alignment:
Q  230 cttttcctttgcttactttttgcgtctctccattaaatcgaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaaccagacta 329  Q
    ||||| |||||| ||||||||| |||||| |||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||  || ||    
T  16013081 ctttttctttgcgtactttttgtgtctcttcattaaatcgaaatggtcccaaagattgacttgatctctgatatatcccattccaaagaaaactggaata 16013180  T
Q  330 tcatggttcaagtcgttcgcctttg 354  Q
    ||| ||||| |||||||| ||||||    
T  16013181 tcagggttcgagtcgttcacctttg 16013205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 4214255 - 4214340
Alignment:
Q  269 gaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgttcgcctttg 354  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||   || || || | ||| |||||||||||||||    
T  4214255 gaaatgacaccaaagattgacttgatttctgatatatccccttccaaagaaaattggaatagcaggattcgagtcgttcgcctttg 4214340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 24201136 - 24201051
Alignment:
Q  269 gaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgttcgcctttg 354  Q
    |||||| | ||||||||||||||||| |||||||||||||||||||||||||||   | ||||| ||||| |||||| ||||||||    
T  24201136 gaaatggcaccaaagattgacttgatttctgatatatccccttccaaagaaaactgaaatatcagggttcgagtcgtccgcctttg 24201051  T

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Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 230 - 322
Target Start/End: Complemental strand, 10014829 - 10014737
Alignment:
Q  230 cttttcctttgcttactttttgcgtctctccattaaatcgaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaac 322  Q
    ||||| |||||| ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||    
T  10014829 ctttttctttgcgtactttttgtgtctcttcattaaatcgaaatggccccaaagattgacttgatctctgatatatcccattacaaagaaaac 10014737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 230 - 322
Target Start/End: Complemental strand, 10115470 - 10115378
Alignment:
Q  230 cttttcctttgcttactttttgcgtctctccattaaatcgaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaac 322  Q
    ||||| |||||| ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||    
T  10115470 ctttttctttgcgtactttttgtgtctcttcattaaatcgaaatggccccaaagattgacttgatctctgatatatcccattacaaagaaaac 10115378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 230 - 322
Target Start/End: Complemental strand, 10252574 - 10252482
Alignment:
Q  230 cttttcctttgcttactttttgcgtctctccattaaatcgaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaac 322  Q
    ||||| |||||| ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||    
T  10252574 ctttttctttgcgtactttttgtgtctcttcattaaatcgaaatggccccaaagattgacttgatctctgatatatcccattacaaagaaaac 10252482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 320
Target Start/End: Complemental strand, 57614 - 57547
Alignment:
Q  253 gtctctccattaaatcgaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaa 320  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||||    
T  57614 gtctctctattaaatcaaaatggccccaaagattgacttgatctctggtatatcccctttcaaagaaa 57547  T

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Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 37798771 - 37798856
Alignment:
Q  269 gaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgttcgcctttg 354  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||    | ||||| ||||| |||||||||||||||    
T  37798771 gaaatggcaccaaagattgacttgatttctgatatatccccttccaaagaaaattgaaatatcagggttcgagtcgttcgcctttg 37798856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 49715201 - 49715116
Alignment:
Q  269 gaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgttcgcctttg 354  Q
    |||||| | ||||||||||||||||| |||||||||||||||||||||||||||  || ||||| ||||| |||||||||||||||    
T  49715201 gaaatggcaccaaagattgacttgatttctgatatatccccttccaaagaaaactggaatatcagggttcgagtcgttcgcctttg 49715116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 39096695 - 39096767
Alignment:
Q  156 tagatccatctaatggctaatattaagtgaagaagagagaaggagacaaattttgaaggagagaatccaattcc 229  Q
    ||||| ||||||||||||||||||||  |||| |||||||||||||| ||||||||||||||  ||||||||||    
T  39096695 tagattcatctaatggctaatattaaaggaaggagagagaaggagac-aattttgaaggagatgatccaattcc 39096767  T

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Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 39095946 - 39095880
Alignment:
Q  162 catctaatggctaatattaagtgaagaagagagaaggagacaaattttgaaggagagaatccaattcc 229  Q
    |||||||||| |||||||||| |||| |||||||||||||| ||||||||||||||| |||| |||||    
T  39095946 catctaatggataatattaagggaaggagagagaaggagac-aattttgaaggagaggatccgattcc 39095880  T

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Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 23176403 - 23176344
Alignment:
Q  156 tagatccatctaatggctaatattaagtgaagaagagagaaggagacaaattttgaaggagag 218  Q
    ||||| |||||||||| ||||||||||  ||| |||||||||||||| |||||||||||||||    
T  23176403 tagattcatctaatggataatattaag--aaggagagagaaggagac-aattttgaaggagag 23176344  T

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Target: chr8 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 320
Target Start/End: Original strand, 19194755 - 19194822
Alignment:
Q  253 gtctctccattaaatcgaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaa 320  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  19194755 gtctctctattaaatcaaaatggccccaaagattgacttgatctctggtatatccccttccaaagaaa 19194822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 21107342 - 21107427
Alignment:
Q  269 gaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgttcgcctttg 354  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||   || ||| | ||||  |||||||||||||||    
T  21107342 gaaatggcaccaaagattgacttgatttctgatatatccccttccaaagaaaattggaatattagggtttgagtcgttcgcctttg 21107427  T

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Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 16651592 - 16651677
Alignment:
Q  269 gaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgttcgcctttg 354  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||   || ||||| ||||| |||||||||||||||    
T  16651592 gaaatggcaccaaagattgacttgatttctgatatatccccttccaaagaaaattggaatatcagggttcgagtcgttcgcctttg 16651677  T

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Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 2347285 - 2347232
Alignment:
Q  269 gaaatgaccccaaagattgacttgatctctgatatatccccttccaaagaaaac 322  Q
    |||||| | |||||||| |||||||| |||||||||||||||||||||||||||    
T  2347285 gaaatggcaccaaagatcgacttgatttctgatatatccccttccaaagaaaac 2347232  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 15911226 - 15911270
Alignment:
Q  184 gaagaagagagaaggagacaaattttgaaggagagaatccaattcc 229  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||||    
T  15911226 gaaggagagagaaggagacaa-ttttgaaggagaggatccaattcc 15911270  T

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Target: scaffold0029 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 278 - 354
Target Start/End: Original strand, 130948 - 131024
Alignment:
Q  278 ccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgttcgcctttg 354  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   || ||||| ||||| |||||||||||||||    
T  130948 ccaaagattgacttgatttctgatatatccccttccaaagaaaattggaatatcagggttcgagtcgttcgcctttg 131024  T

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Target: scaffold0002 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 278 - 354
Target Start/End: Original strand, 308765 - 308841
Alignment:
Q  278 ccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgttcgcctttg 354  Q
    ||||||||||||||||| ||||||||||||||||||||||||||   || ||||| ||||| |||||||||||||||    
T  308765 ccaaagattgacttgatttctgatatatccccttccaaagaaaattggaatatcagggttcgagtcgttcgcctttg 308841  T

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Target: scaffold0583 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 278 - 354
Target Start/End: Original strand, 7351 - 7427
Alignment:
Q  278 ccaaagattgacttgatctctgatatatccccttccaaagaaaaccagactatcatggttcaagtcgttcgcctttg 354  Q
    |||||||| |||||||| ||| ||||| |||||||||||||||||  || ||||| ||||| |||||||||||||||    
T  7351 ccaaagatcgacttgatttctaatataaccccttccaaagaaaactggaatatcagggttcgagtcgttcgcctttg 7427  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 45116915 - 45117001
Alignment:
Q  269 gaaatgaccccaaagattgacttgatctctgatatatcccc-ttccaaagaaaaccagactatcatggttcaagtcgttcgcctttg 354  Q
    |||||| | ||||||||||||||||| ||| | |||||||| ||||||||||||| ||| |||||  |||| |||| |||| |||||    
T  45116915 gaaatggcaccaaagattgacttgatttctaacatatcccctttccaaagaaaactagaatatcagagttcgagtcattcgtctttg 45117001  T

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