View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10466_high_42 (Length: 309)

Name: NF10466_high_42
Description: NF10466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10466_high_42
NF10466_high_42
[»] chr1 (49 HSPs)
chr1 (17-117)||(113190-113288)
chr1 (220-306)||(113306-113398)
chr1 (220-309)||(22881578-22881668)
chr1 (220-276)||(24577181-24577238)
chr1 (238-309)||(2218264-2218336)
chr1 (231-309)||(35919237-35919317)
chr1 (220-309)||(42359400-42359501)
chr1 (231-307)||(46940761-46940834)
chr1 (220-309)||(1704946-1705044)
chr1 (225-266)||(18337341-18337382)
chr1 (231-275)||(31694706-31694751)
chr1 (225-266)||(40258939-40258980)
chr1 (220-275)||(1486705-1486761)
chr1 (270-309)||(5898217-5898256)
chr1 (225-275)||(6612167-6612218)
chr1 (231-266)||(18471318-18471353)
chr1 (225-275)||(47989509-47989560)
chr1 (270-308)||(1486656-1486694)
chr1 (220-266)||(18190114-18190160)
chr1 (220-266)||(22515893-22515939)
chr1 (220-266)||(31015050-31015096)
chr1 (220-266)||(38078667-38078713)
chr1 (225-309)||(48040425-48040509)
chr1 (226-266)||(1815270-1815310)
chr1 (226-266)||(28273094-28273134)
chr1 (270-306)||(40181940-40181976)
chr1 (225-256)||(9449024-9449055)
chr1 (270-309)||(9828124-9828163)
chr1 (278-309)||(27965951-27965982)
chr1 (270-309)||(40917829-40917868)
chr1 (231-266)||(51410043-51410078)
chr1 (113-151)||(4549797-4549835)
chr1 (105-135)||(5756779-5756809)
chr1 (105-135)||(6074421-6074451)
chr1 (220-266)||(8010293-8010339)
chr1 (266-308)||(8117115-8117157)
chr1 (271-309)||(16297232-16297270)
chr1 (228-266)||(21378593-21378631)
chr1 (220-262)||(31672905-31672947)
chr1 (220-266)||(46348389-46348435)
chr1 (220-266)||(48450593-48450639)
chr1 (276-309)||(351029-351062)
chr1 (220-257)||(398780-398817)
chr1 (231-275)||(5944301-5944346)
chr1 (220-309)||(7918165-7918263)
chr1 (270-307)||(18190061-18190098)
chr1 (220-265)||(32434723-32434768)
chr1 (272-309)||(40258884-40258921)
chr1 (220-264)||(32461471-32461515)
[»] chr7 (35 HSPs)
chr7 (220-309)||(18215148-18215238)
chr7 (220-309)||(3991331-3991421)
chr7 (225-275)||(9778512-9778563)
chr7 (220-275)||(24339649-24339705)
chr7 (220-266)||(11061082-11061128)
chr7 (220-266)||(26033467-26033513)
chr7 (220-275)||(5409832-5409888)
chr7 (220-264)||(25481909-25481953)
chr7 (270-309)||(5409782-5409821)
chr7 (220-309)||(30813819-30813905)
chr7 (220-266)||(11665446-11665492)
chr7 (270-307)||(3294257-3294294)
chr7 (225-266)||(7438718-7438759)
chr7 (225-266)||(9408340-9408381)
chr7 (231-275)||(18039017-18039062)
chr7 (220-275)||(13770698-13770754)
chr7 (220-275)||(27945048-27945104)
chr7 (220-309)||(28155577-28155662)
chr7 (225-309)||(40287313-40287403)
chr7 (220-275)||(43027465-43027521)
chr7 (270-309)||(598277-598316)
chr7 (270-309)||(14729772-14729811)
chr7 (231-266)||(21560521-21560556)
chr7 (270-309)||(43027415-43027454)
chr7 (271-309)||(6490786-6490824)
chr7 (225-275)||(11272582-11272635)
chr7 (220-266)||(21880159-21880205)
chr7 (271-309)||(32287414-32287452)
chr7 (231-275)||(2334268-2334313)
chr7 (231-275)||(32094016-32094061)
chr7 (220-264)||(7058433-7058477)
chr7 (225-257)||(8737119-8737151)
chr7 (231-263)||(13557750-13557782)
chr7 (271-307)||(24105748-24105784)
chr7 (278-306)||(24339730-24339758)
[»] chr6 (40 HSPs)
chr6 (220-309)||(9025456-9025546)
chr6 (220-309)||(31959166-31959258)
chr6 (220-309)||(7938123-7938208)
chr6 (220-307)||(9027185-9027273)
chr6 (234-307)||(9911495-9911566)
chr6 (220-275)||(10770670-10770726)
chr6 (220-275)||(16766704-16766760)
chr6 (220-274)||(31384927-31384982)
chr6 (220-266)||(34595141-34595187)
chr6 (220-275)||(9107366-9107422)
chr6 (220-275)||(12696331-12696387)
chr6 (220-275)||(2117083-2117138)
chr6 (220-266)||(1681765-1681811)
chr6 (220-266)||(7801162-7801208)
chr6 (220-266)||(7977836-7977882)
chr6 (220-266)||(9522898-9522944)
chr6 (220-266)||(16833315-16833361)
chr6 (220-266)||(28715302-28715348)
chr6 (220-275)||(8365515-8365571)
chr6 (220-264)||(8776981-8777025)
chr6 (220-275)||(8931598-8931654)
chr6 (220-275)||(26562696-26562752)
chr6 (103-154)||(3169336-3169387)
chr6 (220-266)||(4877949-4877996)
chr6 (225-260)||(5970120-5970155)
chr6 (220-263)||(17841598-17841641)
chr6 (220-304)||(21924907-21924987)
chr6 (231-266)||(24645499-24645534)
chr6 (270-309)||(31384999-31385038)
chr6 (220-266)||(853865-853911)
chr6 (220-266)||(1191706-1191752)
chr6 (271-309)||(8389419-8389457)
chr6 (232-266)||(28152117-28152151)
chr6 (225-266)||(403870-403911)
chr6 (225-266)||(426520-426561)
chr6 (270-307)||(28152167-28152204)
chr6 (225-257)||(16388248-16388280)
chr6 (225-265)||(17341671-17341711)
chr6 (220-264)||(17435206-17435250)
chr6 (231-296)||(31428983-31429044)
[»] chr4 (30 HSPs)
chr4 (220-309)||(37203271-37203360)
chr4 (220-309)||(23292937-23293038)
chr4 (220-309)||(11596308-11596404)
chr4 (225-309)||(5775315-5775405)
chr4 (220-266)||(29205451-29205497)
chr4 (220-265)||(28964255-28964300)
chr4 (220-275)||(3947762-3947818)
chr4 (270-309)||(49431095-49431134)
chr4 (220-307)||(20633492-20633577)
chr4 (220-266)||(21945510-21945556)
chr4 (231-305)||(42640547-42640628)
chr4 (220-266)||(54580029-54580075)
chr4 (225-266)||(6485617-6485658)
chr4 (220-275)||(12895112-12895168)
chr4 (270-309)||(28084593-28084632)
chr4 (220-266)||(847958-848004)
chr4 (232-266)||(12797344-12797378)
chr4 (272-309)||(715556-715593)
chr4 (231-264)||(715615-715648)
chr4 (272-309)||(752882-752919)
chr4 (231-264)||(752941-752974)
chr4 (220-257)||(16189716-16189753)
chr4 (231-275)||(28084540-28084585)
chr4 (220-265)||(38847019-38847064)
chr4 (232-275)||(4383386-4383430)
chr4 (225-257)||(9996852-9996884)
chr4 (220-264)||(19482675-19482719)
chr4 (252-309)||(30094068-30094121)
chr4 (232-264)||(40481655-40481687)
chr4 (220-264)||(51701265-51701309)
[»] chr3 (42 HSPs)
chr3 (220-309)||(11610528-11610617)
chr3 (220-309)||(3163982-3164077)
chr3 (220-266)||(21256992-21257038)
chr3 (220-309)||(1509546-1509642)
chr3 (220-266)||(26508117-26508163)
chr3 (220-266)||(28918008-28918054)
chr3 (220-307)||(40052339-40052418)
chr3 (220-264)||(4987299-4987343)
chr3 (230-266)||(8593154-8593190)
chr3 (220-275)||(14209120-14209176)
chr3 (220-275)||(49651782-49651838)
chr3 (270-309)||(4987231-4987270)
chr3 (232-271)||(35994739-35994778)
chr3 (220-309)||(55401082-55401183)
chr3 (220-266)||(10954959-10955005)
chr3 (225-307)||(25775520-25775613)
chr3 (271-309)||(34185063-34185101)
chr3 (220-277)||(34185117-34185175)
chr3 (220-266)||(34910324-34910370)
chr3 (220-266)||(51206359-51206405)
chr3 (229-266)||(3865690-3865727)
chr3 (225-266)||(8587027-8587068)
chr3 (225-266)||(20503477-20503518)
chr3 (272-309)||(40993286-40993323)
chr3 (225-265)||(10268493-10268533)
chr3 (220-275)||(14832106-14832162)
chr3 (220-264)||(25948895-25948939)
chr3 (225-276)||(39756248-39756300)
chr3 (270-309)||(15999961-16000000)
chr3 (278-309)||(20503542-20503573)
chr3 (270-309)||(27505320-27505359)
chr3 (220-274)||(28812522-28812577)
chr3 (220-271)||(34307781-34307832)
chr3 (270-309)||(52369856-52369895)
chr3 (220-266)||(7928457-7928503)
chr3 (225-274)||(15796291-15796341)
chr3 (220-266)||(21479125-21479171)
chr3 (220-257)||(1438811-1438848)
chr3 (113-146)||(43116529-43116562)
chr3 (220-256)||(14979188-14979224)
chr3 (232-275)||(27505265-27505309)
chr3 (220-275)||(41961646-41961702)
[»] chr8 (34 HSPs)
chr8 (220-308)||(25566848-25566937)
chr8 (220-308)||(8342979-8343074)
chr8 (220-275)||(22651983-22652039)
chr8 (220-266)||(4948659-4948705)
chr8 (220-308)||(13436922-13437016)
chr8 (220-266)||(29510310-29510356)
chr8 (220-275)||(2572052-2572108)
chr8 (225-269)||(41831943-41831987)
chr8 (270-308)||(22943301-22943339)
chr8 (225-309)||(40332203-40332299)
chr8 (220-265)||(8343323-8343368)
chr8 (225-266)||(20873081-20873122)
chr8 (220-265)||(30077394-30077439)
chr8 (220-264)||(36450762-36450806)
chr8 (270-309)||(126298-126337)
chr8 (220-274)||(15816126-15816181)
chr8 (278-309)||(17751733-17751764)
chr8 (278-309)||(17760720-17760751)
chr8 (231-266)||(18407737-18407772)
chr8 (270-309)||(29510244-29510283)
chr8 (270-308)||(8343396-8343434)
chr8 (275-309)||(16987987-16988021)
chr8 (271-309)||(22652057-22652095)
chr8 (220-266)||(25192353-25192399)
chr8 (226-275)||(30271287-30271337)
chr8 (270-308)||(36450706-36450744)
chr8 (225-266)||(4298892-4298933)
chr8 (220-295)||(14731719-14731791)
chr8 (271-308)||(16641921-16641958)
chr8 (221-266)||(18170488-18170533)
chr8 (221-266)||(18634056-18634101)
chr8 (220-265)||(22197749-22197794)
chr8 (113-154)||(29699182-29699223)
chr8 (220-264)||(22596001-22596045)
[»] scaffold0223 (1 HSPs)
scaffold0223 (220-305)||(20179-20261)
[»] scaffold0020 (1 HSPs)
scaffold0020 (220-307)||(135276-135364)
[»] chr5 (43 HSPs)
chr5 (220-275)||(39698548-39698604)
chr5 (270-309)||(14873591-14873630)
chr5 (220-309)||(21191007-21191108)
chr5 (220-266)||(6247629-6247675)
chr5 (231-308)||(15884006-15884084)
chr5 (220-266)||(21576751-21576797)
chr5 (220-307)||(2436929-2437017)
chr5 (225-276)||(13287394-13287446)
chr5 (220-275)||(31084330-31084386)
chr5 (270-309)||(17088360-17088399)
chr5 (270-309)||(17593674-17593713)
chr5 (270-309)||(35017112-35017151)
chr5 (220-266)||(14674276-14674322)
chr5 (220-266)||(42893367-42893413)
chr5 (220-308)||(5894796-5894885)
chr5 (225-266)||(24906307-24906348)
chr5 (220-275)||(7677712-7677768)
chr5 (231-274)||(12199948-12199992)
chr5 (272-308)||(15382556-15382592)
chr5 (220-264)||(43001807-43001851)
chr5 (231-266)||(15382497-15382532)
chr5 (272-307)||(19579783-19579818)
chr5 (270-309)||(43001874-43001913)
chr5 (225-271)||(5467979-5468025)
chr5 (93-135)||(5563651-5563693)
chr5 (220-266)||(7218273-7218319)
chr5 (220-266)||(8420034-8420080)
chr5 (115-149)||(10296366-10296400)
chr5 (220-266)||(21351911-21351957)
chr5 (220-266)||(33178032-33178078)
chr5 (271-309)||(39268549-39268587)
chr5 (220-265)||(15405062-15405107)
chr5 (272-309)||(19820339-19820376)
chr5 (220-257)||(40131628-40131665)
chr5 (225-265)||(6326304-6326344)
chr5 (272-304)||(7677787-7677819)
chr5 (271-307)||(15410390-15410426)
chr5 (220-275)||(19579708-19579764)
chr5 (220-275)||(21522757-21522813)
chr5 (220-275)||(21533323-21533379)
chr5 (220-275)||(21542037-21542093)
chr5 (272-308)||(38464325-38464361)
chr5 (225-308)||(39695963-39696046)
[»] chr2 (33 HSPs)
chr2 (220-275)||(30717526-30717582)
chr2 (220-309)||(2438670-2438771)
chr2 (225-266)||(30404856-30404897)
chr2 (220-309)||(42832243-42832328)
chr2 (270-309)||(37419823-37419862)
chr2 (226-275)||(33153437-33153487)
chr2 (220-265)||(21374706-21374751)
chr2 (220-275)||(12668419-12668475)
chr2 (231-309)||(23058395-23058483)
chr2 (220-274)||(974754-974809)
chr2 (227-266)||(11223869-11223908)
chr2 (220-274)||(15657871-15657926)
chr2 (231-266)||(19536403-19536438)
chr2 (278-309)||(19942342-19942373)
chr2 (270-309)||(26769591-26769630)
chr2 (225-275)||(37419755-37419806)
chr2 (270-309)||(38117110-38117149)
chr2 (226-275)||(4882692-4882742)
chr2 (220-266)||(12940941-12940987)
chr2 (220-266)||(18841019-18841065)
chr2 (220-266)||(20539680-20539726)
chr2 (270-308)||(27084338-27084376)
chr2 (220-309)||(29970511-29970601)
chr2 (220-266)||(37558984-37559030)
chr2 (221-259)||(42418877-42418915)
chr2 (225-266)||(15972885-15972926)
chr2 (225-266)||(18421975-18422016)
chr2 (272-309)||(18840964-18841001)
chr2 (220-257)||(28677916-28677953)
chr2 (220-265)||(39323271-39323316)
chr2 (220-264)||(38117167-38117211)
chr2 (226-266)||(38442320-38442360)
chr2 (221-257)||(41942113-41942149)
[»] scaffold0103 (2 HSPs)
scaffold0103 (268-309)||(51890-51931)
scaffold0103 (220-264)||(51818-51862)
[»] scaffold0652 (1 HSPs)
scaffold0652 (220-309)||(413-514)
[»] scaffold0361 (1 HSPs)
scaffold0361 (220-263)||(14537-14580)
[»] scaffold0021 (1 HSPs)
scaffold0021 (227-266)||(130496-130535)
[»] scaffold0009 (1 HSPs)
scaffold0009 (247-309)||(188445-188508)
[»] scaffold0136 (1 HSPs)
scaffold0136 (225-274)||(3846-3896)
[»] scaffold0011 (1 HSPs)
scaffold0011 (220-266)||(17755-17801)
[»] scaffold0027 (1 HSPs)
scaffold0027 (225-266)||(46694-46735)
[»] scaffold0722 (1 HSPs)
scaffold0722 (220-264)||(7040-7084)
[»] scaffold0450 (1 HSPs)
scaffold0450 (220-275)||(8631-8687)
[»] scaffold0025 (1 HSPs)
scaffold0025 (231-274)||(23788-23832)
[»] scaffold0004 (2 HSPs)
scaffold0004 (269-305)||(83254-83290)
scaffold0004 (220-265)||(92814-92859)
[»] scaffold0066 (1 HSPs)
scaffold0066 (220-271)||(33365-33415)
[»] scaffold0003 (1 HSPs)
scaffold0003 (270-309)||(241674-241713)
[»] scaffold0123 (1 HSPs)
scaffold0123 (220-266)||(44531-44577)
[»] scaffold0019 (1 HSPs)
scaffold0019 (270-308)||(71805-71843)
[»] scaffold0018 (1 HSPs)
scaffold0018 (220-265)||(178825-178871)
[»] scaffold0793 (2 HSPs)
scaffold0793 (272-309)||(4832-4869)
scaffold0793 (231-264)||(4891-4924)
[»] scaffold0171 (1 HSPs)
scaffold0171 (231-275)||(23438-23483)
[»] scaffold0050 (1 HSPs)
scaffold0050 (225-266)||(70290-70331)
[»] scaffold0044 (1 HSPs)
scaffold0044 (225-266)||(53192-53233)
[»] scaffold0246 (1 HSPs)
scaffold0246 (232-264)||(19594-19626)
[»] scaffold0008 (1 HSPs)
scaffold0008 (220-275)||(263368-263424)


Alignment Details
Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 113190 - 113288
Alignment:
Q  17 caccaagattatcaattgatagtgacatcattcctcctgctttgatagaaattatctggtggggagaggagtgaacatatgaaaacaatttatatcatct 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  113190 caccaagattatcaattgatagtgacatcattcctcctgctttgatagaaattatctggtggggagaggagtgatc--atgaaaacaatttatatcatct 113287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 220 - 306
Target Start/End: Original strand, 113306 - 113398
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaa------gtgtcgtgtcgtgtccaacaccgggacacgcctaatccgaggagtg 306  Q
    |||| |||||||||||||||||||||||||| |||||||||      ||||||||||||||||||||||||||||||||||||||||||||||    
T  113306 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtcgtgtccaacaccgggacacgcctaatccgaggagtg 113398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 22881668 - 22881578
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg-tgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| |||||||||||||||||||||| ||| ||||||||||||||| |||||    | ||||||||||||| ||||||||||||||||||    
T  22881668 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacaccgggacacgtctaatccgaggagtgtcc 22881578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 24577238 - 24577181
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtcc 276  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  24577238 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcc 24577181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 2218264 - 2218336
Alignment:
Q  238 cacataattcagtataattacaagtgtcg-tgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||||| ||| ||||||||||||||| |||||||||| ||||  |||||||||||||| |||||||||||    
T  2218264 cacataatttagtgtaattacaagtgtcggtgtcgtgtccgacactaggacacgcctaatctgaggagtgtcc 2218336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 35919317 - 35919237
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgt-cgtgtcgtgtccaacac-cgggacacgcctaatccgaggagtgtcc 309  Q
    |||||||||||||||||||| |||||| |||||| |||||||||||  |||| |||||||||||||||| ||||| |||||    
T  35919317 aaaaaatcacataattcagtgtaattataagtgtccgtgtcgtgtcggacacgcgggacacgcctaatcggaggactgtcc 35919237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 42359501 - 42359400
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg-tgtcg-----------tgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    |||| ||||||||||||||||| |||||||| ||||||||||||||| |||||           ||||| ||||||||||||||||||||||||||||||    
T  42359501 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgt 42359402  T
Q  308 cc 309  Q
    ||    
T  42359401 cc 42359400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 46940834 - 46940761
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtcgtgtcgtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    ||||||| |||||||| ||| ||||||||||| |||   ||||||| ||||||| ||||||||||||||||||||||    
T  46940834 aaaaaataacataattaagtgtaattacaagtttcg---cgtgtccgacaccggaacacgcctaatccgaggagtgt 46940761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 1705044 - 1704946
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgt--------cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| |||||||||||||||||||||||||  |||||||||||||| ||||        ||||||| |||||| |||||||||||||| ||||||||||    
T  1705044 ctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgtgtcaacgtgtccgacaccgagacacgcctaatccaaggagtgtcc 1704946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 18337341 - 18337382
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  18337341 aatttgaaaaaatcacataattcagtgtaattacaagtgtcg 18337382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 31694751 - 31694706
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  31694751 aaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtc 31694706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 40258980 - 40258939
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  40258980 aatttgaaaaaatcacataattcagtgtaattacaagtgtcg 40258939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 1486761 - 1486705
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  1486761 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtc 1486705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 5898256 - 5898217
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  5898256 cgtgtccaacaccgggacacgtctaatccgaggagtgtcc 5898217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 6612218 - 6612167
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    ||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  6612218 aatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtc 6612167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 266
Target Start/End: Original strand, 18471318 - 18471353
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtcg 266  Q
    ||||||||||||||||||||||||||||||||||||    
T  18471318 aaaaaatcacataattcagtataattacaagtgtcg 18471353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 275
Target Start/End: Original strand, 47989509 - 47989560
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    ||||| |||||||||||||||||||| |||||||||||||| ||||||||||    
T  47989509 aatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 47989560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 1486694 - 1486656
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtc 308  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  1486694 cgtgtccgacaccgggacacgcctaatccgaggagtgtc 1486656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 18190160 - 18190114
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||    
T  18190160 ctaataatttgaaaaaattacataattcagtgtaattacaagtgtcg 18190114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 22515939 - 22515893
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||||    
T  22515939 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 22515893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 31015050 - 31015096
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||| |||||||||||||||||| |||||||||||||||    
T  31015050 ctaataatttgagaaaatcacataattcagtgtaattacaagtgtcg 31015096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 38078713 - 38078667
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||| | |||||||||||||||    
T  38078713 ctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcg 38078667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 309
Target Start/End: Complemental strand, 48040509 - 48040425
Alignment:
Q  225 aatttgaaaaaa-tcacataattcagtataattacaagtgtcgtgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||||||||||  ||||||| || ||| ||| ||||||||||| ||||||||| |||| ||||||||||||||  |||||||||||    
T  48040509 aatttgaaaaaggtcacatattttagtgtaaatacaagtgtcg-gtcgtgtccgacactgggacacgcctaattggaggagtgtcc 48040425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 1815270 - 1815310
Alignment:
Q  226 atttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||| |||||||||||||||    
T  1815270 attttaaaaaatcacataattcagtgtaattacaagtgtcg 1815310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 28273134 - 28273094
Alignment:
Q  226 atttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||| |||||||||| |||||||||||||||    
T  28273134 atttgaaaaaatcatataattcagtgtaattacaagtgtcg 28273094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 40181940 - 40181976
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtg 306  Q
    ||||||| |||||||||||||||||||||||||||||    
T  40181940 cgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 256
Target Start/End: Complemental strand, 9449055 - 9449024
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataatt 256  Q
    ||||||||||||||||||||||||||||||||    
T  9449055 aatttgaaaaaatcacataattcagtataatt 9449024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 9828124 - 9828163
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  9828124 cgtgtccgacaccgggacacgtctaatccgaggagtgtcc 9828163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 309
Target Start/End: Complemental strand, 27965982 - 27965951
Alignment:
Q  278 acaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||||||||||||||||||||||||||||    
T  27965982 acaccgggacacgcctaatccgaggagtgtcc 27965951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 40917829 - 40917868
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  40917829 cgtgtccgacaccgggacacgcctaatccgaggactgtcc 40917868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 266
Target Start/End: Original strand, 51410043 - 51410078
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||| |||||||||||||||    
T  51410043 aaaaaatcacataattcagtgtaattacaagtgtcg 51410078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 151
Target Start/End: Complemental strand, 4549835 - 4549797
Alignment:
Q  113 atcttttgttatagaaatagcttgcacataaacatttat 151  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  4549835 atcttttgttatagaaatagcttgtacataagcatttat 4549797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 135
Target Start/End: Original strand, 5756779 - 5756809
Alignment:
Q  105 tttatatcatcttttgttatagaaatagctt 135  Q
    |||||||||||||||||||||||||||||||    
T  5756779 tttatatcatcttttgttatagaaatagctt 5756809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 135
Target Start/End: Complemental strand, 6074451 - 6074421
Alignment:
Q  105 tttatatcatcttttgttatagaaatagctt 135  Q
    |||||||||||||||||||||||||||||||    
T  6074451 tttatatcatcttttgttatagaaatagctt 6074421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 8010339 - 8010293
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||| | ||||||||||||||||| ||||||||    
T  8010339 ctaataatttgaaaaaattatataattcagtataattataagtgtcg 8010293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 8117115 - 8117157
Alignment:
Q  266 gtgtcgtgtccaacaccgggacacgcctaatccgaggagtgtc 308  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||    
T  8117115 gtgtcgtgtccgacatcgggacacgcctaatccgaggaatgtc 8117157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Complemental strand, 16297270 - 16297232
Alignment:
Q  271 gtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  16297270 gtgtccgacaccaggacacgcctaatccgaggagtgtcc 16297232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 21378593 - 21378631
Alignment:
Q  228 ttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  21378593 ttgaaaaaattacataattcagtgtaattacaagtgtcg 21378631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 31672947 - 31672905
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagt 262  Q
    |||| |||||||||||||||| ||||||||| |||||||||||    
T  31672947 ctaataatttgaaaaaatcacttaattcagtgtaattacaagt 31672905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 46348435 - 46348389
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||||| |||||| ||| |||||||||||||||    
T  46348435 ctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg 46348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 48450639 - 48450593
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||| |||||||| ||| |||||||||||||||    
T  48450639 ctaataatttgaaaaaataacataatttagtgtaattacaagtgtcg 48450593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 309
Target Start/End: Complemental strand, 351062 - 351029
Alignment:
Q  276 caacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||||||||||||||||||| ||||||||||    
T  351062 caacaccgggacacgcctaatccaaggagtgtcc 351029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 398817 - 398780
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataatta 257  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  398817 ctaataatttgaaaaaatcacataattcagtgtaatta 398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 5944301 - 5944346
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||||||||||||||||||| |||||| ||||||| ||||||||||    
T  5944301 aaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtc 5944346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 7918263 - 7918165
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtcca--------acaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| ||||||| |||||||||||||||||| |||||| | ||||| |||||||||| |        ||||| |||||| |||||||||||||||||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcaacgtttctgacaccaggacacacctaatccgaggagtgtcc 7918165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 18190098 - 18190061
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  18190098 cgtgtccgacaccgggacacacctaatccgaggagtgt 18190061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 32434768 - 32434723
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc 265  Q
    |||| ||||||||||| |||||||||||| | ||||||||||||||    
T  32434768 ctaataatttgaaaaagtcacataattcattgtaattacaagtgtc 32434723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 40258921 - 40258884
Alignment:
Q  272 tgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  40258921 tgtccgacaccaggacacgcctaatccgaggagtgtcc 40258884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 32461515 - 32461471
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt 264  Q
    |||| |||||||||||||||||||||| | | |||||||||||||    
T  32461515 ctaataatttgaaaaaatcacataatttaatgtaattacaagtgt 32461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 5e-25; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 18215238 - 18215148
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg-tgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| ||||||||||||||||||||| |||| || |||||||||||| |||||||||| |||||||||||||||||||| |||||||||||    
T  18215238 ctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgtgtccgacaccgggacacgcctaatctgaggagtgtcc 18215148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 3991331 - 3991421
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||       || |||||||||||||||||||||||||||    
T  3991331 ctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtcgtatcgactgggacacgcctaatccgaggagtgtcc 3991421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 275
Target Start/End: Original strand, 9778512 - 9778563
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9778512 aatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtc 9778563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 24339649 - 24339705
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  24339649 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 24339705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 11061128 - 11061082
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||    
T  11061128 ctaataatttgaaaaaatcacataatttagtataattacaagtgtcg 11061082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 26033513 - 26033467
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26033467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 5409888 - 5409832
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  5409888 ctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtc 5409832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 25481909 - 25481953
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt 264  Q
    |||| |||||||||||||||||||||||||| |||||||||||||    
T  25481909 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 25481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 5409821 - 5409782
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  5409821 cgtgtccgacaccgggacacgcctaatccgaggagtgtcc 5409782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 30813819 - 30813905
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcgtgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| ||||||| ||||| |||||||||||| |||||||| |||| |   ||||||| ||| | | ||||||||||||||||||||||||    
T  30813819 ctaataatttgagaaaattacataattcagtgtaattacaggtgttg---cgtgtccgacatcagaacacgcctaatccgaggagtgtcc 30813905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 11665492 - 11665446
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||||    
T  11665492 ctaataatttgaaaaaatcacataattcagtctaattataagtgtcg 11665446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 3294294 - 3294257
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  3294294 cgtgtccaacaccgggacacgcctaatccgaagagtgt 3294257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 7438718 - 7438759
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  7438718 aatttgaaaaaatcacataattcaatgtaattacaagtgtcg 7438759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 9408381 - 9408340
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  9408381 aatttgaaaaaatcacataatttagtgtaattacaagtgtcg 9408340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 18039017 - 18039062
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||    
T  18039017 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 18039062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 13770698 - 13770754
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg-tgtcgtgtc 275  Q
    |||| ||||| ||||||| |||||||||||| ||||||||||||||| |||||||||    
T  13770698 ctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgtgtc 13770754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 27945048 - 27945104
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| ||||||| ||||| |||||||||||| |||||||||||||| ||||||||||    
T  27945048 ctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 28155577 - 28155662
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcgtgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| ||||||| ||||| ||||||||| || |||||||||||||||    |||||  ||||| ||||||||||||||| |||| |||||    
T  28155577 ctaataatttgagaaaattacataattcggtgtaattacaagtgtcg----gtgtcggacaccaggacacgcctaatccaaggaatgtcc 28155662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 309
Target Start/End: Complemental strand, 40287403 - 40287313
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg-tgtcg------tgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||||||||||| ||| |||||| ||||||||||||||| | |||      ||||| ||||||||||| ||||||||||||||||||||    
T  40287403 aatttgaaaaaatcatata-ttcagtgtaattacaagtgtcggtatcggacacatgtccgacaccgggacatgcctaatccgaggagtgtcc 40287313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 43027521 - 43027465
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| ||||||||||||||||||||| |||| ||| |||||||||| ||||||||||    
T  43027521 ctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtc 43027465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 598277 - 598316
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  598277 cgtgtccgacaccgggacacgcctaatccgagaagtgtcc 598316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 14729772 - 14729811
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  14729772 cgtgtccgacaccgggacacgcttaatccgaggagtgtcc 14729811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 266
Target Start/End: Original strand, 21560521 - 21560556
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||| |||||||||||||||    
T  21560521 aaaaaatcacataattcagtgtaattacaagtgtcg 21560556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 43027454 - 43027415
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  43027454 cgtgtccgacaccgggacacgcctaatccgatgagtgtcc 43027415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Original strand, 6490786 - 6490824
Alignment:
Q  271 gtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtcc 6490824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 11272635 - 11272582
Alignment:
Q  225 aatttgaaaaaatcacata--attcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||||||||||||||||||  ||||||| |||||||||||||| ||||||||||    
T  11272635 aatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtc 11272582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 21880159 - 21880205
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||| ||||| |||||||||||| |||||||||||||||    
T  21880159 ctaataatttgagaaaattacataattcagtgtaattacaagtgtcg 21880205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Complemental strand, 32287452 - 32287414
Alignment:
Q  271 gtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  32287452 gtgtccgacaccgggacacacctaatccgaggagtgtcc 32287414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 2334268 - 2334313
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||||    
T  2334268 aaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtc 2334313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 32094061 - 32094016
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||    
T  32094061 aaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgtc 32094016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 7058433 - 7058477
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt 264  Q
    |||| |||||||||||||||  ||||||||| |||||||||||||    
T  7058433 ctaataatttgaaaaaatcatgtaattcagtgtaattacaagtgt 7058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 257
Target Start/End: Complemental strand, 8737151 - 8737119
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataatta 257  Q
    ||||||| |||||||||||||||||||||||||    
T  8737151 aatttgataaaatcacataattcagtataatta 8737119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 13557782 - 13557750
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtg 263  Q
    |||||||||||||||||||| ||||||||||||    
T  13557782 aaaaaatcacataattcagtgtaattacaagtg 13557750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Original strand, 24105748 - 24105784
Alignment:
Q  271 gtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    |||||| |||||||||||||||||| |||||||||||    
T  24105748 gtgtccgacaccgggacacgcctaacccgaggagtgt 24105784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 278 - 306
Target Start/End: Original strand, 24339730 - 24339758
Alignment:
Q  278 acaccgggacacgcctaatccgaggagtg 306  Q
    |||||||||||||||||||||||||||||    
T  24339730 acaccgggacacgcctaatccgaggagtg 24339758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 9025546 - 9025456
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg-tgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| ||||||| |||||||||||||||||| |||||| | |||||| |||||||||| |||||||||||||||||||||||| |||||||    
T  9025546 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtccgacaccgggacacgcctaatccgagaagtgtcc 9025456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 31959166 - 31959258
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtc--gtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||| | | |  |||||| |||||||||||| |||||||||||||||||||    
T  31959166 ctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcggcgacatgtgtccgacaccgggacacacctaatccgaggagtgtcc 31959258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 7938123 - 7938208
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcgtgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| ||||||||||||||| |||||| ||| |||||| ||||||||    |||||| |||||| ||||||||| |||||||||||||||    
T  7938123 ctaataatttgaaaaaatcatataatttagtgtaattataagtgtcg----gtgtccgacaccgagacacgcctgatccgaggagtgtcc 7938208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 307
Target Start/End: Original strand, 9027185 - 9027273
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg-tgtcgtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    |||| ||||||| | ||||||||||||| || |||||| | |||||| |||||||||| ||||||||||||| ||||||| ||||||||    
T  9027185 ctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgtccgacaccgggacacggctaatccaaggagtgt 9027273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 9911566 - 9911495
Alignment:
Q  234 aaatcacataattcagtataattacaagtgtc-gtgtcgtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    ||| ||||||||||||||||||||||||    
T  9911566 aaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc---aaccaggacacgcctaatccgaggagtgt 9911495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 10770726 - 10770670
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  10770726 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 10770670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 16766704 - 16766760
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  16766704 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 16766760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 31384927 - 31384982
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgt 274  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  31384927 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 31384982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 34595141 - 34595187
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||    
T  34595141 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 34595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 9107422 - 9107366
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  9107422 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtc 9107366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 12696331 - 12696387
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  12696331 ctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgtc 12696387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 2117083 - 2117138
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcgtgtcgtgtc 275  Q
    |||| |||||||||||||||||||||||| |  ||||| |||||||||||||||||    
T  2117083 ctaataatttgaaaaaatcacataattcaatgcaattataagtgtcgtgtcgtgtc 2117138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 1681765 - 1681811
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||| ||||||||| |||||||||||||||    
T  1681765 ctaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 7801208 - 7801162
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||    
T  7801208 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcg 7801162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 7977882 - 7977836
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||    
T  7977882 ctaataatttgaaaaaattacataattcagtgtaattacaagtgtcg 7977836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 9522898 - 9522944
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcg 9522944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 16833315 - 16833361
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||||    
T  16833315 ctaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcg 16833361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 28715302 - 28715348
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||    
T  28715302 ctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 28715348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 8365571 - 8365515
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| |||||||||| |||||||||||| || |||||||||||||| ||||||||||    
T  8365571 ctaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtc 8365515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 8777025 - 8776981
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt 264  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||    
T  8777025 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgt 8776981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 8931654 - 8931598
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg-tgtcgtgtc 275  Q
    |||||||||||| ||||| ||||||||||||||||||| | |||||| |||||||||    
T  8931654 ctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcgtgtc 8931598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 26562696 - 26562752
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg-tgtcgtgtc 275  Q
    |||||||||||| |||||||||||||||||| |||||| | |||||| |||||||||    
T  26562696 ctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtc 26562752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 3169336 - 3169387
Alignment:
Q  103 aatttatatcatcttttgttatagaaatagcttgcacataaacatttatatg 154  Q
    ||||||| |||||||||||||||||||||| || ||||||| || |||||||    
T  3169336 aatttatttcatcttttgttatagaaataggttacacataagcacttatatg 3169387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 4877949 - 4877996
Alignment:
Q  220 ctaaaaatttgaaaaaa-tcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||| |||||||||| |||||||||||||||||||    
T  4877949 ctaataatttgaaaaaagtcacataattaagtataattacaagtgtcg 4877996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 260
Target Start/End: Complemental strand, 5970155 - 5970120
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaa 260  Q
    |||||||||||||||||||||||||| |||||||||    
T  5970155 aatttgaaaaaatcacataattcagtgtaattacaa 5970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 17841641 - 17841598
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtg 263  Q
    |||| |||||||||||||||||||||| ||| ||||||||||||    
T  17841641 ctaataatttgaaaaaatcacataatttagtgtaattacaagtg 17841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 304
Target Start/End: Complemental strand, 21924987 - 21924907
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcgtgtcgtgtccaacaccgggacacgcctaatccgaggag 304  Q
    |||| ||||||| || |||| |||||||||| |||||| | ||||||    |||||  |||||||||||||||||||||||||||    
T  21924987 ctaataatttgagaatatcaaataattcagtgtaattatatgtgtcg----gtgtcggacaccgggacacgcctaatccgaggag 21924907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 266
Target Start/End: Original strand, 24645499 - 24645534
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtcg 266  Q
    ||||||||||||||||||||||| ||||||||||||    
T  24645499 aaaaaatcacataattcagtatagttacaagtgtcg 24645534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 31384999 - 31385038
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  31384999 cgtgtcctacaccgggacacgcctaatccaaggagtgtcc 31385038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 853911 - 853865
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||| |||  ||||||||||||||    
T  853911 ctaataatttgaaaaaatcacataattaagtgcaattacaagtgtcg 853865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 1191752 - 1191706
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||| ||||| |||||||| |||||||||||||||    
T  1191752 ctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcg 1191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Complemental strand, 8389457 - 8389419
Alignment:
Q  271 gtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  8389457 gtgtccgacaccgggacacacctaatccgaggagtgtcc 8389419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Original strand, 28152117 - 28152151
Alignment:
Q  232 aaaaatcacataattcagtataattacaagtgtcg 266  Q
    ||||||||||||||||||| |||||||||||||||    
T  28152117 aaaaatcacataattcagtgtaattacaagtgtcg 28152151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 403911 - 403870
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||||| ||| ||| |||||||||||    
T  403911 aatttgaaaaaatcacataatttagtgtaactacaagtgtcg 403870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 426561 - 426520
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||||| | | |||||||||||||||    
T  426561 aatttgaaaaaatcacataattaaatgtaattacaagtgtcg 426520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 28152167 - 28152204
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  28152167 cgtgtccgacaccgggacaggcctaatccgaggagtgt 28152204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 257
Target Start/End: Complemental strand, 16388280 - 16388248
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataatta 257  Q
    |||||||||||||||||||||||||| ||||||    
T  16388280 aatttgaaaaaatcacataattcagtgtaatta 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 17341711 - 17341671
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtc 265  Q
    ||||||| |||||||||||||||||| |||||| |||||||    
T  17341711 aatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 17435206 - 17435250
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt 264  Q
    |||| ||||| ||||||| |||||||||||| |||||||||||||    
T  17435206 ctaataattttaaaaaattacataattcagtgtaattacaagtgt 17435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 31429044 - 31428983
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtcgtgtcgtgtccaacaccgggacacgcctaat 296  Q
    |||||||||||||||||||| ||||||||| ||| |    |||||||||||  |||||||||||||    
T  31429044 aaaaaatcacataattcagtgtaattacaaatgtag----gtgtccaacacatggacacgcctaat 31428983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 37203271 - 37203360
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcgtgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| ||||||||||||| |||||||| ||| ||||||||||||| |||||| |||| ||||||||||||| |||||||||| |||||||    
T  37203271 ctaataatttgaaaaaatgacataatttagtgtaattacaagtgtagtgtcgggtccgacaccgggacacgtctaatccgagaagtgtcc 37203360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 23293038 - 23292937
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgt-----------cgtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||           ||||||| ||||||||||||||||||||||||||||||    
T  23293038 ctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgt 23292939  T
Q  308 cc 309  Q
    ||    
T  23292938 cc 23292937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 11596404 - 11596308
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaa------gtgtcgtgtc-gtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| |||||||||||||||||||||||||| |||||||||      ||||||||||  ||||| ||| |||||||||||||||| |||||||||||    
T  11596404 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtcattgtccgacatcgggacacgcctaatctgaggagtgtcc 11596308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 309
Target Start/End: Complemental strand, 5775405 - 5775315
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg------tgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| |||||||||||||| ||| |||||| | ||||||      ||||||||||| | |||||||||||||||||||||||||||||    
T  5775405 aatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtcatgtcgtgtccaccgccgggacacgcctaatccgaggagtgtcc 5775315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 29205451 - 29205497
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 29205497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 28964300 - 28964255
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc 265  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||    
T  28964300 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 28964255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 3947818 - 3947762
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  3947818 ctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtc 3947762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 49431095 - 49431134
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  49431095 cgtgtccaacaccgggacacgccttatccgaggagtgtcc 49431134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 307
Target Start/End: Original strand, 20633492 - 20633577
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcgtgtc-gtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    |||| ||||||||||||   ||||||||| | ||||||||||||||||||| |||||  |||||  |||||||||||||| ||||||||    
T  20633492 ctaataatttgaaaaaa---cataattcaatgtaattacaagtgtcgtgtcggtgtcggacaccaagacacgcctaatccaaggagtgt 20633577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 21945510 - 21945556
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||    
T  21945510 ctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 21945556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 42640547 - 42640628
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtc-gtgt------cgtgtccaacaccgggacacgcctaatccgaggagt 305  Q
    |||||||||||||||||||| |||||||||||||| ||||      |||||||  |||| ||||||||||||||||||||||    
T  42640547 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtccggcaccaggacacgcctaatccgaggagt 42640628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 54580075 - 54580029
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||||    
T  54580075 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcg 54580029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 6485658 - 6485617
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  6485658 aatttgaaaaaatcacataatttagtgtaattacaagtgtcg 6485617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 12895168 - 12895112
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| ||||||||||||||||||||||||   |||||||||||||| ||||||||||    
T  12895168 ctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtc 12895112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 28084593 - 28084632
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  28084593 cgtgtccgacactgggacacgcctaatccgaggagtgtcc 28084632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 847958 - 848004
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||| ||||| |||||||||| |||||||||||||||||    
T  847958 ctaataatttgagaaaattacataattcactataattacaagtgtcg 848004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Complemental strand, 12797378 - 12797344
Alignment:
Q  232 aaaaatcacataattcagtataattacaagtgtcg 266  Q
    ||||||||||||||||||| |||||||||||||||    
T  12797378 aaaaatcacataattcagtgtaattacaagtgtcg 12797344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 715593 - 715556
Alignment:
Q  272 tgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  715593 tgtccgacacagggacacgcctaatccgaggagtgtcc 715556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 715648 - 715615
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgt 264  Q
    |||||||||||||||||||| |||||||||||||    
T  715648 aaaaaatcacataattcagtgtaattacaagtgt 715615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 752919 - 752882
Alignment:
Q  272 tgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  752919 tgtccgacacagggacacgcctaatccgaggagtgtcc 752882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 752974 - 752941
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgt 264  Q
    |||||||||||||||||||| |||||||||||||    
T  752974 aaaaaatcacataattcagtgtaattacaagtgt 752941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 16189716 - 16189753
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataatta 257  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  16189716 ctaaaaatttgagaaaatcacataattcagtgtaatta 16189753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 28084540 - 28084585
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||    
T  28084540 aaaaaatcacataattcaatgtaattacaagtgtctgtgtcgtgtc 28084585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 38847064 - 38847019
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc 265  Q
    |||| ||||||||||||||| || ||||||| ||||||||||||||    
T  38847064 ctaataatttgaaaaaatcatattattcagtgtaattacaagtgtc 38847019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 275
Target Start/End: Original strand, 4383386 - 4383430
Alignment:
Q  232 aaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||||    
T  4383386 aaaaatcacataattcagtgtaattacaaatgtcagtgtcgtgtc 4383430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 257
Target Start/End: Original strand, 9996852 - 9996884
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataatta 257  Q
    ||||||| |||||||||||||||||||||||||    
T  9996852 aatttgagaaaatcacataattcagtataatta 9996884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 19482675 - 19482719
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt 264  Q
    |||| |||||||||| |||||||||||| || |||||||||||||    
T  19482675 ctaataatttgaaaatatcacataattcggtgtaattacaagtgt 19482719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 30094068 - 30094121
Alignment:
Q  252 taattacaagtgtcgtgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||||||||||||||    |||||  ||||||||||||||||||||||| ||||||||    
T  30094068 taattacaagtgtcg----gtgtcggacaccgggacacgcctaatccgaagagtgtcc 30094121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 264
Target Start/End: Original strand, 40481655 - 40481687
Alignment:
Q  232 aaaaatcacataattcagtataattacaagtgt 264  Q
    ||||||||||||||||||| |||||||||||||    
T  40481655 aaaaatcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 51701265 - 51701309
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt 264  Q
    |||| ||||||||||||| |||||||| ||| |||||||||||||    
T  51701265 ctaataatttgaaaaaattacataattgagtgtaattacaagtgt 51701309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 5e-22; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 11610528 - 11610617
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcgtgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| ||||| |||||||||||||||||||| || |||||||||||  ||||||||| ||| |||||||||||||||| |||||||||||    
T  11610528 ctaataatttaaaaaaatcacataattcagtgtagttacaagtgtcaagtcgtgtccgacatcgggacacgcctaatctgaggagtgtcc 11610617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 3164077 - 3163982
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt------cgtgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| |||||||||||||||||||||||||| |||  ||||||||      |||||||||||| |||||| |||||||||||| ||||||||||||    
T  3164077 ctaataatttgaaaaaatcacataattcagtgtaagaacaagtgttgatgtcgtgtcgtgtccgacaccgagacacgcctaattcgaggagtgtcc 3163982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 21257038 - 21256992
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  21257038 ctaataatttgaaaaaatcacataattcagtataattacaagtgtcg 21256992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 1509546 - 1509642
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtc------gtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||| |||||      |||||| ||||||| |||||||||||| |||||||||||    
T  1509546 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtttcggtgtccgacaccggtacacgcctaatcggaggagtgtcc 1509642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 26508117 - 26508163
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||    
T  26508117 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 28918008 - 28918054
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||    
T  28918008 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 28918054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 307
Target Start/End: Original strand, 40052339 - 40052418
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcgtgtcgtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    |||| ||||||||||||||||||||||||      | ||||||||||   ||||||| ||||||||||||||||||||||||||||||    
T  40052339 ctaataatttgaaaaaatcacataattca------tcacaagtgtcga--cgtgtccgacaccgggacacgcctaatccgaggagtgt 40052418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 4987343 - 4987299
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt 264  Q
    |||| |||||||||||||||||||||||||| |||||||||||||    
T  4987343 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 4987299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 8593154 - 8593190
Alignment:
Q  230 gaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||||||||||||||||||||    
T  8593154 gaaaaaatcacataattcagtataattacaagtgtcg 8593190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 14209120 - 14209176
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||||    
T  14209120 ctaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtc 14209176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 49651838 - 49651782
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| |||||||||||||||||||||||| | |||||||||||||| ||||||||||    
T  49651838 ctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtc 49651782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 4987270 - 4987231
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  4987270 cgtgtccgacaccgggacacgcctaatccgaggagtgtcc 4987231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 35994778 - 35994739
Alignment:
Q  232 aaaaatcacataattcagtataattacaagtgtcgtgtcg 271  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  35994778 aaaaatcacataattcagtgtaattacaagtgtcgtgtcg 35994739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 55401082 - 55401183
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgt-----------cgtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||| ||||           ||||||| |||||| |||||||||||||||||||||||    
T  55401082 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgt 55401181  T
Q  308 cc 309  Q
    ||    
T  55401182 cc 55401183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 10954959 - 10955005
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||||| |||| ||||||||||    
T  10954959 ctaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcg 10955005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 307
Target Start/End: Original strand, 25775520 - 25775613
Alignment:
Q  225 aatttgaaaa-aatcacataattcagtataattacaagtgtcgt----------gtcgtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    |||||||||| |||||||||||||||| |||||||||||||||           ||||||||| ||||| ||||||||||||||||||||||||    
T  25775520 aatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtcggacacgtcgtgtccgacaccaggacacgcctaatccgaggagtgt 25775613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 309
Target Start/End: Complemental strand, 34185101 - 34185063
Alignment:
Q  271 gtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  34185101 gtgtccgacaccgggacacgcctaatccgaggagtgtcc 34185063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 277
Target Start/End: Complemental strand, 34185175 - 34185117
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtcca 277  Q
    |||| ||||| ||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  34185175 ctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgtcca 34185117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 34910324 - 34910370
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||||| |||||||||| ||||    
T  34910324 ctaataatttgaaaaaatcacataattcagtgtaattacaagagtcg 34910370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 51206405 - 51206359
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||||| ||| |||||||||||    
T  51206405 ctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcg 51206359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 3865690 - 3865727
Alignment:
Q  229 tgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  3865690 tgaaaaactcacataattcagtataattacaagtgtcg 3865727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 8587068 - 8587027
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  8587068 aatttgaaaaaatcacataattaagtgtaattacaagtgtcg 8587027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 20503477 - 20503518
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  20503477 aatttgaaaaaatgacataattcagtgtaattacaagtgtcg 20503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 40993323 - 40993286
Alignment:
Q  272 tgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  40993323 tgtccgacaccgggacacgcctaatccgaggagtgtcc 40993286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 10268533 - 10268493
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtc 265  Q
    |||||||||||||||||||||| ||| ||||||||||||||    
T  10268533 aatttgaaaaaatcacataatttagtgtaattacaagtgtc 10268493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 14832106 - 14832162
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||| ||||||||||    
T  14832106 ctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtc 14832162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 25948939 - 25948895
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt 264  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 39756248 - 39756300
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtcc 276  Q
    ||||| |||||||||||||||| | |||||||||||||||| |||||||||||    
T  39756248 aatttaaaaaaatcacataatttaatataattacaagtgtcggtgtcgtgtcc 39756300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 16000000 - 15999961
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  16000000 cgtgtccgacaccgggacacgcctaatccaaggagtgtcc 15999961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 309
Target Start/End: Original strand, 20503542 - 20503573
Alignment:
Q  278 acaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||||||||||||||||||||||||||||    
T  20503542 acaccgggacacgcctaatccgaggagtgtcc 20503573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 27505320 - 27505359
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  27505320 cgtgtccgacaccgggacatgcctaatccgaggagtgtcc 27505359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 28812522 - 28812577
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgt 274  Q
    |||| |||||||| ||||||||||||||||| || ||||||||||| |||||||||    
T  28812522 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 28812577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 34307832 - 34307781
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcgtgtcg 271  Q
    |||| ||||||| ||||||||||| |||||| |||||| |||||||||||||    
T  34307832 ctaataatttgagaaaatcacatatttcagtgtaattataagtgtcgtgtcg 34307781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 52369856 - 52369895
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  52369856 cgtgtccaacaccgggacacacctattccgaggagtgtcc 52369895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 7928457 - 7928503
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||||| |||||| | ||||||    
T  7928457 ctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcg 7928503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 274
Target Start/End: Complemental strand, 15796341 - 15796291
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgt 274  Q
    ||||||||||||||| |||||||||| ||||||||| |||| |||||||||    
T  15796341 aatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgt 15796291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 21479125 - 21479171
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||||||| |||||||| ||||||| |||||||    
T  21479125 ctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcg 21479171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 1438811 - 1438848
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataatta 257  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  1438811 ctaacaatttgagaaaatcacataattcagtataatta 1438848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 146
Target Start/End: Original strand, 43116529 - 43116562
Alignment:
Q  113 atcttttgttatagaaatagcttgcacataaaca 146  Q
    ||||||||||||||||||||||| ||||||||||    
T  43116529 atcttttgttatagaaatagcttacacataaaca 43116562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 14979188 - 14979224
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataatt 256  Q
    |||| |||||||||||||||||||||||||| |||||    
T  14979188 ctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 275
Target Start/End: Original strand, 27505265 - 27505309
Alignment:
Q  232 aaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||||    
T  27505265 aaaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtc 27505309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 41961702 - 41961646
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| |||||||||| ||||||| |||| || |||||||||||||| ||||||||||    
T  41961702 ctaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcgtgtc 41961646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 308
Target Start/End: Original strand, 25566848 - 25566937
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtccaacaccgggacacgcctaatccgaggagtgtc 308  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| |||||||||      ||||||||||||||||||||||||||||    
T  25566848 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgttggtgtccgggacacgcctaatccgaggagtgtc 25566937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 308
Target Start/End: Original strand, 8342979 - 8343074
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtc------gtgtccaacaccgggacacgcctaatccgaggagtgtc 308  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||| |||||      |||||| ||||||||||||||||||||||| |||||||    
T  8342979 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtacatgtgtccgacaccgggacacgcctaatccgaagagtgtc 8343074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 22651983 - 22652039
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  22651983 ctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtc 22652039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 4948659 - 4948705
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||    
T  4948659 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 4948705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 308
Target Start/End: Complemental strand, 13437016 - 13436922
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc-----caacaccgggacacgcctaatccgaggagtgtc 308  Q
    |||| ||||||||||||||||||||||||   |||| ||||||||| ||||||||||     | ||||||||||||||||||||| |||||||||    
T  13437016 ctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcgtgtcggtgtcgacaccgggacacgcctaatccaaggagtgtc 13436922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 29510356 - 29510310
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  29510356 ctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcg 29510310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 2572108 - 2572052
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||||    
T  2572108 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtc 2572052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 41831987 - 41831943
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcgtgt 269  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||    
T  41831987 aatttgaaaaaatcacataattcagtgtaactacaagtgtcgtgt 41831943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 22943339 - 22943301
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtc 308  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  22943339 cgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 309
Target Start/End: Original strand, 40332203 - 40332299
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtc-gtgt-----------cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||||           ||||||| |||||||||| |||||||||||||||||||||    
T  40332203 aatttgagaaaatcacataattcagtgtaattacaagtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtcc 40332299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 8343323 - 8343368
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc 265  Q
    |||| |||||||||||||||||||||| ||| ||||||||||||||    
T  8343323 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 8343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 20873081 - 20873122
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  20873081 aatttgaaaaaatcacataatttagtgtaattacaagtgtcg 20873122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 30077439 - 30077394
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc 265  Q
    |||| |||||||||| ||||||||||||||| ||||||||||||||    
T  30077439 ctaataatttgaaaacatcacataattcagtgtaattacaagtgtc 30077394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 36450806 - 36450762
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt 264  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||    
T  36450806 ctaataatttgaaaaaatcacagaattcagtgtaattacaagtgt 36450762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 126337 - 126298
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  126337 cgtgtccaataccgggacacggctaatccgaggagtgtcc 126298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 15816181 - 15816126
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgt 274  Q
    |||| |||||||||||||||||||||| ||| |||||| ||||||| |||||||||    
T  15816181 ctaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 15816126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 309
Target Start/End: Original strand, 17751733 - 17751764
Alignment:
Q  278 acaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||||||||||||||||||||||||||||    
T  17751733 acaccgggacacgcctaatccgaggagtgtcc 17751764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 309
Target Start/End: Original strand, 17760720 - 17760751
Alignment:
Q  278 acaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||||||||||||||||||||||||||||    
T  17760720 acaccgggacacgcctaatccgaggagtgtcc 17760751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 266
Target Start/End: Original strand, 18407737 - 18407772
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||| |||||||||||||||    
T  18407737 aaaaaatcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 29510283 - 29510244
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  29510283 cgtgtccgacaccgggacacacctaatccgaggagtgtcc 29510244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 308
Target Start/End: Original strand, 8343396 - 8343434
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtc 308  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  8343396 cgtgtccgacaccgggacacgcctaatccgaagagtgtc 8343434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 16987987 - 16988021
Alignment:
Q  275 ccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||||||||||| |||||||||||||||||||    
T  16987987 ccaacaccgggacacccctaatccgaggagtgtcc 16988021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Original strand, 22652057 - 22652095
Alignment:
Q  271 gtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  22652057 gtgtccgacaccgggacacgtctaatccgaggagtgtcc 22652095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 25192399 - 25192353
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||| | ||||||||||||||||||| ||||||||    
T  25192399 ctaataatttgaaaaagtgacataattcagtataattataagtgtcg 25192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 30271337 - 30271287
Alignment:
Q  226 atttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||||||||||||||||||| |||| |||||||||||| | ||||||||||    
T  30271337 atttgaaaaaatcacataatgcagtgtaattacaagtgccagtgtcgtgtc 30271287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 36450744 - 36450706
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtc 308  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  36450744 cgtgtccgacaccaggacacgcctaatccgaggagtgtc 36450706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 4298933 - 4298892
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||||| | | |||||||||||||||    
T  4298933 aatttgaaaaaatcacataatttaatgtaattacaagtgtcg 4298892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 14731719 - 14731791
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcgtgtcgtgtccaacaccgggacacgcctaa 295  Q
    |||| ||||||| |||||||||||||| ||| |||||| | ||   ||||||||||| ||||| ||||||||||||    
T  14731719 ctaataatttgagaaaatcacataatttagtgtaattatatgt---gtgtcgtgtccgacaccaggacacgcctaa 14731791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 16641958 - 16641921
Alignment:
Q  271 gtgtccaacaccgggacacgcctaatccgaggagtgtc 308  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  16641958 gtgtctaacaccgggacacacctaatccgaggagtgtc 16641921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 18170533 - 18170488
Alignment:
Q  221 taaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    ||||||||||||||||| |||||||||| | ||||||||| |||||    
T  18170533 taaaaatttgaaaaaattacataattcaatgtaattacaaatgtcg 18170488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 18634101 - 18634056
Alignment:
Q  221 taaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    ||||||||||||||||| |||||||||| | ||||||||| |||||    
T  18634101 taaaaatttgaaaaaattacataattcaatgtaattacaaatgtcg 18634056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 22197794 - 22197749
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc 265  Q
    |||| ||||||||||| |||||||||| ||| ||||||||||||||    
T  22197794 ctaataatttgaaaaattcacataatttagtgtaattacaagtgtc 22197749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 29699223 - 29699182
Alignment:
Q  113 atcttttgttatagaaatagcttgcacataaacatttatatg 154  Q
    ||||||||||||||||||| |||| |||||| ||||||||||    
T  29699223 atcttttgttatagaaataacttgtacataagcatttatatg 29699182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 22596001 - 22596045
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt 264  Q
    |||| ||||| ||||||| |||||||||||| |||||||||||||    
T  22596001 ctaataatttaaaaaaataacataattcagtgtaattacaagtgt 22596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 305
Target Start/End: Original strand, 20179 - 20261
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtccaacaccgggacacgcctaatccgaggagt 305  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| |||||||||    |   |||||||||||||||||||||||    
T  20179 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt----cggtgggacacgcctaatccgaggagt 20261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 307
Target Start/End: Complemental strand, 135364 - 135276
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg-tgtcgtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    |||| ||||||| ||||||||||||||| || |||||| | |||||| |||||||||| ||||| |||||||||||||| |||| ||||    
T  135364 ctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtccgacaccaggacacgcctaatctgaggcgtgt 135276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 39698548 - 39698604
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  39698548 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtc 39698604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 14873591 - 14873630
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14873591 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 14873630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 21191108 - 21191007
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgt-----------cgtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| ||||           ||||||| || |||||||||||||||||||||||||||    
T  21191108 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgt 21191009  T
Q  308 cc 309  Q
    ||    
T  21191008 cc 21191007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 6247629 - 6247675
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||    
T  6247629 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 6247675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 15884006 - 15884084
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtcg-tgtcgtgtccaacaccgggacacgcctaatccgaggagtgtc 308  Q
    |||||||||||||||||||| ||||||||||||||| |||||    | |||| || |||||||||||||||||||||||    
T  15884006 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacactggaacacgcctaatccgaggagtgtc 15884084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 21576797 - 21576751
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||    
T  21576797 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 21576751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 307
Target Start/End: Original strand, 2436929 - 2437017
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg-tgtcgtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    |||| |||||| ||||||||||||||||  | | |||| | |||||| |||||||||| |||||  |||||||||||||||||||||||    
T  2436929 ctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcggtgtcgtgtccgacaccaagacacgcctaatccgaggagtgt 2437017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 13287446 - 13287394
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtcc 276  Q
    |||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  13287446 aatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgtcc 13287394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 31084330 - 31084386
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg-tgtcgtgtc 275  Q
    |||| |||||||||||||||||||||||| | ||||||||||||||| |||||||||    
T  31084330 ctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtc 31084386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 17088360 - 17088399
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  17088360 cgtgtccgacaccgggacacgcctaatccgaggagtgtcc 17088399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 17593713 - 17593674
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  17593713 cgtgtccaacaccgggacacgcttaatccgaggagtgtcc 17593674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 35017112 - 35017151
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  35017112 cgtgtccaacatcgggacacgcctaatccgaggagtgtcc 35017151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 14674276 - 14674322
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||||    
T  14674276 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 14674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 42893367 - 42893413
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||||    
T  42893367 ctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcg 42893413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 308
Target Start/End: Complemental strand, 5894885 - 5894796
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtccaacaccgggacacgcctaatccgaggagtgtc 308  Q
    |||| ||||||||||||||| |||||| | | ||| |||||||||| ||||||||||  |||||||||||||  |||||  |||||||||    
T  5894885 ctaataatttgaaaaaatcatataatttaatctaactacaagtgtcggtgtcgtgtcggacaccgggacacgtataatctaaggagtgtc 5894796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 24906348 - 24906307
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  24906348 aatttgaaaaaatgacataattcagtgtaattacaagtgtcg 24906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 7677712 - 7677768
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| ||||||||||||||||||||||||||  ||||| ||||||| ||||||||||    
T  7677712 ctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtc 7677768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 274
Target Start/End: Original strand, 12199948 - 12199992
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgt 274  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  12199948 aaaaaatcacataattcagtacaattacaagtgtcggtgtcgtgt 12199992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 15382556 - 15382592
Alignment:
Q  272 tgtccaacaccgggacacgcctaatccgaggagtgtc 308  Q
    ||||| |||||||||||||||||||||||||||||||    
T  15382556 tgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 43001807 - 43001851
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt 264  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||    
T  43001807 ctaataatttgaaaaaattacataattcagtgtaattacaagtgt 43001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 266
Target Start/End: Original strand, 15382497 - 15382532
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtcg 266  Q
    ||||||||| ||||||||||||||||||||||||||    
T  15382497 aaaaaatcatataattcagtataattacaagtgtcg 15382532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 307
Target Start/End: Original strand, 19579783 - 19579818
Alignment:
Q  272 tgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    |||| |||||||||||||||||||||||||||||||    
T  19579783 tgtctaacaccgggacacgcctaatccgaggagtgt 19579818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 43001874 - 43001913
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  43001874 cgtgtcaaacacctggacacgcctaatccgaggagtgtcc 43001913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 5468025 - 5467979
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcgtgtcg 271  Q
    ||||||| |||||||||||||||||| |||||| | |||||||||||    
T  5468025 aatttgataaaatcacataattcagtgtaattataggtgtcgtgtcg 5467979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 5563693 - 5563651
Alignment:
Q  93 atatgaaaacaatttatatcatcttttgttatagaaatagctt 135  Q
    ||||||||| ||||||| | |||||||||||||||||||||||    
T  5563693 atatgaaaataatttattttatcttttgttatagaaatagctt 5563651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 7218319 - 7218273
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||| || ||||||||||||||||| |||||||||||||||    
T  7218319 ctaataatttaaataaatcacataattcagtgtaattacaagtgtcg 7218273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 8420034 - 8420080
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||| |||||||||| | |||||||||||||||    
T  8420034 ctaataatttgaaaaaataacataattcaatgtaattacaagtgtcg 8420080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 149
Target Start/End: Complemental strand, 10296400 - 10296366
Alignment:
Q  115 cttttgttatagaaatagcttgcacataaacattt 149  Q
    ||||||||||||||||||||| |||||||||||||    
T  10296400 cttttgttatagaaatagcttacacataaacattt 10296366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 21351957 - 21351911
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||| |||||| |||||||||||||| |||||||||||||||    
T  21351957 ctaataattggaaaaagtcacataattcagtgtaattacaagtgtcg 21351911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 33178032 - 33178078
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||| |||||||||||||||| ||| |||||||||||||||    
T  33178032 ctaataatttaaaaaaatcacataatttagtgtaattacaagtgtcg 33178078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Complemental strand, 39268587 - 39268549
Alignment:
Q  271 gtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  39268587 gtgtccgacactgggacacgcctaatccgaggagtgtcc 39268549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 15405107 - 15405062
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc 265  Q
    |||| ||||||||||||||| |||||||| | ||||||||||||||    
T  15405107 ctaataatttgaaaaaatcatataattcaatgtaattacaagtgtc 15405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 19820376 - 19820339
Alignment:
Q  272 tgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtcc 19820339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 40131628 - 40131665
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataatta 257  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  40131628 ctaataatttgaaaaaatcacataattcagtttaatta 40131665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 6326344 - 6326304
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtc 265  Q
    ||||||| ||||| |||||||||||| ||||||||||||||    
T  6326344 aatttgagaaaattacataattcagtgtaattacaagtgtc 6326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 304
Target Start/End: Original strand, 7677787 - 7677819
Alignment:
Q  272 tgtccaacaccgggacacgcctaatccgaggag 304  Q
    ||||| |||||||||||||||||||||||||||    
T  7677787 tgtccgacaccgggacacgcctaatccgaggag 7677819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Complemental strand, 15410426 - 15410390
Alignment:
Q  271 gtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    |||||||||||||||||||| |||| |||||||||||    
T  15410426 gtgtccaacaccgggacacgtctaagccgaggagtgt 15410390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 19579708 - 19579764
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| ||||||| |||||||||||||| |||  ||||||||||||| ||||||||||    
T  19579708 ctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtc 19579764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 21522757 - 21522813
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| ||||| ||||||| |||||||||||| ||||||||| |||| ||||||||||    
T  21522757 ctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtc 21522813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 21533323 - 21533379
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| ||||| ||||||| |||||||||||| ||||||||| |||| ||||||||||    
T  21533323 ctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtc 21533379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 21542037 - 21542093
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| ||||| |||| || |||||||||||| |||||||||||||| ||||||||||    
T  21542037 ctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtc 21542093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 38464361 - 38464325
Alignment:
Q  272 tgtccaacaccgggacacgcctaatccgaggagtgtc 308  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  38464361 tgtccgacaccgggacacacctaatccgaggagtgtc 38464325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 39696046 - 39695963
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcgtgtcg-tgtccaacaccgggacacgcctaatccgaggagtgtc 308  Q
    ||||||| ||||| | |||||| ||| |||| | | ||||||||||| ||||| |||| |||||||||||||||| |||||||||    
T  39696046 aatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtccgacac-gggacacgcctaatcctaggagtgtc 39695963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 30717582 - 30717526
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg-tgtcgtgtc 275  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  30717582 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtc 30717526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 2438771 - 2438670
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcg-----------tgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||| ||||||           ||||| ||||||||||||||||||||||||||||||    
T  2438771 ctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgt 2438672  T
Q  308 cc 309  Q
    ||    
T  2438671 cc 2438670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 30404897 - 30404856
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  30404897 aatttgaaaaaatcacataattcagtgtaattacaagtgtcg 30404856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 42832328 - 42832243
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcgtgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| ||||||| ||||| ||||| |||||| |||||| ||||||||    |||||| || |||||||||||||||||| ||||||||||    
T  42832328 ctaataatttgagaaaattacatatttcagtgtaattataagtgtcg----gtgtccgactccgggacacgcctaatccaaggagtgtcc 42832243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 37419823 - 37419862
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  37419823 cgtgtccgacaccgggacacgcctaatccgaggagtgtcc 37419862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 33153437 - 33153487
Alignment:
Q  226 atttgaaaaaatcacataattcagtataattacaagtgt-cgtgtcgtgtc 275  Q
    |||| |||||||||||||||||||| ||||||||||||| |||||||||||    
T  33153437 atttaaaaaaatcacataattcagtgtaattacaagtgtccgtgtcgtgtc 33153487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 21374751 - 21374706
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc 265  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||    
T  21374751 ctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 12668475 - 12668419
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| ||||||||||||| |||||||||||| |||||| ||||||| ||||||||||    
T  12668475 ctaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtc 12668419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 23058483 - 23058395
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtcg------tgtcg----tgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||||||||||| |||| |||||||||||||||      |||||    ||||| |||||||||||||||||||||||| |||||||    
T  23058483 aaaaaatcacataatccagtgtaattacaagtgtcggtgtcgtgtcggtgttgtccgacaccgggacacgcctaatccgagaagtgtcc 23058395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 974754 - 974809
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgt 274  Q
    |||| |||||||||| ||||||| ||||||| |||||||||||||| |||||||||    
T  974754 ctaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtcgtgt 974809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 11223908 - 11223869
Alignment:
Q  227 tttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  11223908 tttgaaaaaataacataattcagtgtaattacaagtgtcg 11223869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 15657871 - 15657926
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgt 274  Q
    |||| |||||| ||||||||||||||||||| ||||||||| |||| |||||||||    
T  15657871 ctaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgt 15657926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 266
Target Start/End: Complemental strand, 19536438 - 19536403
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||| |||||||||||||||    
T  19536438 aaaaaatcacataattcagtgtaattacaagtgtcg 19536403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 309
Target Start/End: Original strand, 19942342 - 19942373
Alignment:
Q  278 acaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||||||||||||||||||||||||||||    
T  19942342 acaccgggacacgcctaatccgaggagtgtcc 19942373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 26769591 - 26769630
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  26769591 cgtgtccgacactgggacacgcctaatccgaggagtgtcc 26769630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 275
Target Start/End: Original strand, 37419755 - 37419806
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    ||||||||||||||||| |||||||| |||||||||||| | ||||||||||    
T  37419755 aatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtc 37419806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 38117149 - 38117110
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| ||||||||||||||||||||||||| ||||||    
T  38117149 cgtgtccgacaccgggacacgcctaatccgaggggtgtcc 38117110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 4882742 - 4882692
Alignment:
Q  226 atttgaaaaaatcacataattcagtataattacaagtgtcg-tgtcgtgtc 275  Q
    |||||||||||| | |||||||||| ||||||||||||||| |||||||||    
T  4882742 atttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcgtgtc 4882692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 12940987 - 12940941
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||||| |||||||||| ||||||||| |||||    
T  12940987 ctaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 18841065 - 18841019
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||| |||||||| ||| |||||||||||||||    
T  18841065 ctaataatttgaaaaaattacataattaagtgtaattacaagtgtcg 18841019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 20539726 - 20539680
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| ||||||||||||||| |||||| ||| |||||||||||||||    
T  20539726 ctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg 20539680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 308
Target Start/End: Original strand, 27084338 - 27084376
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtc 308  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  27084338 cgtgtccaacaccgagacacgcctaatcggaggagtgtc 27084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 29970601 - 29970511
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg-tgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| ||||||| |||||| |||| |||||| |||| | | |||||| |||||||||  | |||||||||| | |||||||||||||||||    
T  29970601 ctaataatttgagaaaatcgcatagttcagtgtaatcatatgtgtcgatgtcgtgtctgataccgggacactcttaatccgaggagtgtcc 29970511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 37558984 - 37559030
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||| ||||||||||||||||| | |||||||||||||||    
T  37558984 ctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcg 37559030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 42418877 - 42418915
Alignment:
Q  221 taaaaatttgaaaaaatcacataattcagtataattaca 259  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  42418877 taaaaatttgaaaaaatgacataattcagtatgattaca 42418915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 15972885 - 15972926
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    ||||||||||||| ||| |||||||| |||||||||||||||    
T  15972885 aatttgaaaaaattacacaattcagtgtaattacaagtgtcg 15972926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 18421975 - 18422016
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    ||||| |||| ||||||||||||||| |||||||||||||||    
T  18421975 aatttaaaaatatcacataattcagtgtaattacaagtgtcg 18422016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 18841001 - 18840964
Alignment:
Q  272 tgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  18841001 tgtccgacaccgggacacacctaatccgaggagtgtcc 18840964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 28677916 - 28677953
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataatta 257  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  28677916 ctaataatttgaaaaaatcacataattcagtgtaatta 28677953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 39323271 - 39323316
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc 265  Q
    |||| ||||||| ||||| |||||||||||| ||||||||||||||    
T  39323271 ctaataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 38117211 - 38117167
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt 264  Q
    |||| ||||||||||||||||||| ||| || |||||||||||||    
T  38117211 ctaataatttgaaaaaatcacatacttcggtgtaattacaagtgt 38117167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 38442320 - 38442360
Alignment:
Q  226 atttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||| |||||||| ||||||||    
T  38442320 atttaaaaaaatcacataattcaatataattataagtgtcg 38442360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 41942113 - 41942149
Alignment:
Q  221 taaaaatttgaaaaaatcacataattcagtataatta 257  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  41942113 taaaaatttgagaaaattacataattcagtataatta 41942149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 51890 - 51931
Alignment:
Q  268 gtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  51890 gtcgtgtccaacaccgggacacgcctaatccgaggaatgtcc 51931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 51818 - 51862
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt 264  Q
    |||| |||||||||||||||||||||||||| |||||||||||||    
T  51818 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 514 - 413
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgt-----------cgtgtccaacaccgggacacgcctaatccgaggagtgt 307  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||| ||||           ||||||| |||||||||||| |||||||||||||||||    
T  514 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgt 415  T
Q  308 cc 309  Q
    ||    
T  414 cc 413  T

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Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 14537 - 14580
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtg 263  Q
    |||| |||||||||||||||||||||||||| ||||||||||||    
T  14537 ctaataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

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Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 130496 - 130535
Alignment:
Q  227 tttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  130496 tttgaaaaaatcacataattcagtgtaattacaagtgtcg 130535  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 188445 - 188508
Alignment:
Q  247 cagtataattacaagtgtcg-tgtcgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    |||| |||| |||||||||| |||||| ||| ||||| ||||||||||||||||||||||||||    
T  188445 cagtgtaataacaagtgtcggtgtcgtatccgacaccaggacacgcctaatccgaggagtgtcc 188508  T

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Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 274
Target Start/End: Complemental strand, 3896 - 3846
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgt 274  Q
    ||||| |||||||||||||||||||| |||||||||||||| |||||||||    
T  3896 aatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 3846  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 17801 - 17755
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||||    
T  17801 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 17755  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 46694 - 46735
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||||||||||||||||| ||||||||| |||||    
T  46694 aatttgaaaaaatcacataattcagtgtaattacaaatgtcg 46735  T

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Target: scaffold0722 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 7084 - 7040
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgt 264  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||    
T  7084 ctaataatttgaaaaaattacataatttagtataattacaagtgt 7040  T

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Target: scaffold0450 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 8687 - 8631
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| |||||||||| |||||||||||| |||||||||||| |||| ||||||||||    
T  8687 ctaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgtc 8631  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 274
Target Start/End: Original strand, 23788 - 23832
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgt 274  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  23788 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 23832  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 305
Target Start/End: Original strand, 83254 - 83290
Alignment:
Q  269 tcgtgtccaacaccgggacacgcctaatccgaggagt 305  Q
    |||| ||||||||||||||||||||||||||||||||    
T  83254 tcgtatccaacaccgggacacgcctaatccgaggagt 83290  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 92814 - 92859
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc 265  Q
    |||| ||||||| ||||| |||||||||||| ||||||||||||||    
T  92814 ctaataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 33415 - 33365
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcgtgtcg 271  Q
    |||| ||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  33415 ctaataatttgaaaaaataacataattcagtgtaattacaa-tgtcgtgtcg 33365  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 241674 - 241713
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  241674 cgtgtccgacaccgggacacgcctaatccgagaagtgtcc 241713  T

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Target: scaffold0123 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 44577 - 44531
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    |||||||||||| |||||||||||||||||| |||||| | ||||||    
T  44577 ctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 44531  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 308
Target Start/End: Original strand, 71805 - 71843
Alignment:
Q  270 cgtgtccaacaccgggacacgcctaatccgaggagtgtc 308  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  71805 cgtgtccgacaccgggacacgactaatccgaggagtgtc 71843  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 178871 - 178825
Alignment:
Q  220 ctaaaaatttgaaaaaatca-cataattcagtataattacaagtgtc 265  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||    
T  178871 ctaataatttgaaaaaatcatcataattcagtgtaattacaagtgtc 178825  T

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Target: scaffold0793 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 4869 - 4832
Alignment:
Q  272 tgtccaacaccgggacacgcctaatccgaggagtgtcc 309  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  4869 tgtccgacacagggacacgcctaatccgaggagtgtcc 4832  T

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Target: scaffold0793; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 4924 - 4891
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgt 264  Q
    |||||||||||||||||||| |||||||||||||    
T  4924 aaaaaatcacataattcagtgtaattacaagtgt 4891  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 23438 - 23483
Alignment:
Q  231 aaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||||||||||||||||||| |||||| ||||||| ||||||||||    
T  23438 aaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtc 23483  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 70290 - 70331
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    ||||||||||||| |||||||||||| |||||| ||||||||    
T  70290 aatttgaaaaaataacataattcagtgtaattataagtgtcg 70331  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 53192 - 53233
Alignment:
Q  225 aatttgaaaaaatcacataattcagtataattacaagtgtcg 266  Q
    ||||||| |||||||||||||||||| |||||| ||||||||    
T  53192 aatttgagaaaatcacataattcagtgtaattataagtgtcg 53233  T

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Target: scaffold0246 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 264
Target Start/End: Original strand, 19594 - 19626
Alignment:
Q  232 aaaaatcacataattcagtataattacaagtgt 264  Q
    ||||||||||||||||||| |||||||||||||    
T  19594 aaaaatcacataattcagtgtaattacaagtgt 19626  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 263424 - 263368
Alignment:
Q  220 ctaaaaatttgaaaaaatcacataattcagtataattacaagtgtc-gtgtcgtgtc 275  Q
    |||| ||||||| |||| ||||||||||||| |||||| ||||||| ||||||||||    
T  263424 ctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtc 263368  T

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