View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10466_high_69 (Length: 246)
Name: NF10466_high_69
Description: NF10466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10466_high_69 |
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Alignment Details
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 305077 - 305294
Alignment:
| Q |
18 |
actcacagatagttggcgagcgtagtcttgaagaagagcagatgcaaaagctttaggtgtgtactgagtgctagttgaataaaaatcagtcatgaaatag |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
305077 |
actcacagatagttggcgagcgtagtcttgaagaagagcagatgcaaaagctttaggtgtgtactgagtgctagttgaataaaaatcagtcatgaaatag |
305176 |
T |
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| Q |
118 |
ttattcaggtaatcattgcttcccaaccctgaataatatatacatttgcttaggtagctattaagtgcatcattgtctcctctaaacaaccttctcattt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
305177 |
ttattcaggtaatcattgcttcccaaccctgaataatatatacatttgcttaggtagctattaagtgcatcattgtctcctctaaacaaccttctcattt |
305276 |
T |
|
| Q |
218 |
cttgcactgtgtttccaa |
235 |
Q |
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|||||||||||||||||| |
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| T |
305277 |
cttgcactgtgtttccaa |
305294 |
T |
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