View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10466_high_83 (Length: 227)
Name: NF10466_high_83
Description: NF10466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10466_high_83 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 19641656 - 19641430
Alignment:
| Q |
1 |
attattagcataatattgatttggacatgctgattttattttgcaggctctcttgagaatgcttcctgcttattacaatcattttcgagcatttgaaaat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19641656 |
attattagcataatattgatttggacatgctgattttattttgcaggctctcttgagaatgcttcctgcttattacaatcattttcgagcatttgaaaat |
19641557 |
T |
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| Q |
101 |
gctctagtgacaaagttttatggcttacattgtgtcaagttaaatggaccttctcagaagaaggtgtacctatatgttgtataaattttttattgtttaa |
200 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
19641556 |
gctctagtgacaaagttttatggattacattgtgtcaagttaaatggaccttctcagaagaaggtgtacctatatgttgcataaattttttattgtttaa |
19641457 |
T |
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| Q |
201 |
aaaagtttaaacatttactagtatcca |
227 |
Q |
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|||| |||||||||||||||||||||| |
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| T |
19641456 |
aaaaatttaaacatttactagtatcca |
19641430 |
T |
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