View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10466_low_72 (Length: 250)
Name: NF10466_low_72
Description: NF10466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10466_low_72 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 28524996 - 28524752
Alignment:
| Q |
1 |
ttaaaagttgatttggagaccgatttagcaaacgatttgaaaaatcagtcgctaaattgtcactaaatcattc--taaatgatgatttgttagtagtagc |
98 |
Q |
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| T |
28524996 |
ttaaaagttgatttggagaccgatctagcaaacgatttgaaaaatcagtcgctaaattgtcactaaatcattcgctaaatgatgatttgttagtagtagc |
28524897 |
T |
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| Q |
99 |
taatcttagaatattatgtattatatgcaataattaaaaagaagttaattttgcttgttacatgtaaaacatactagacaaactatgcaagtcaatgaga |
198 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28524896 |
taatcttagaatattatgtactatatgcaataattaaaaagaagttaattttgcttgttacatgtaaaacatactagacaaactatgcaagtcaatgaga |
28524797 |
T |
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| Q |
199 |
tagagactatacagaagattaaagtagtggttagtacctttgctt |
243 |
Q |
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||||||||||||||||||||||||||| |||||||||| ||||| |
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| T |
28524796 |
tagagactatacagaagattaaagtagaagttagtacctatgctt |
28524752 |
T |
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