View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10466_low_81 (Length: 242)
Name: NF10466_low_81
Description: NF10466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10466_low_81 |
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Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 224
Target Start/End: Original strand, 18829375 - 18829584
Alignment:
| Q |
15 |
caaaggcaattgaagtacacgagccaaagccaacccaaaaacccaaaaatttcattaagcaaaggatcacaaacccaagtagtaagggttcttcaactac |
114 |
Q |
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| T |
18829375 |
caaaagcaattcaagtacacgagccaaagccaacccaaaaacccaaaaaattcattaagcaaaggatcacaaacccaagtagtaagggttcttcaactac |
18829474 |
T |
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| Q |
115 |
aacttcaggtgaaggatatggcgccgtttgtagcatcgatgatagcgatgatttctccacaacaacgttctcggatgttagcacaacaaacaactactct |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |
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| T |
18829475 |
aacttcaggtgaaggatatggcgccgtttgtagcatcgatgatagcgatgatttctccaccacgacgttctcggatgttagcacaacaaacaactactct |
18829574 |
T |
|
| Q |
215 |
gcacccaaac |
224 |
Q |
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|||||||||| |
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| T |
18829575 |
gcacccaaac |
18829584 |
T |
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