View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10466_low_9 (Length: 587)

Name: NF10466_low_9
Description: NF10466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10466_low_9
NF10466_low_9
[»] chr7 (45 HSPs)
chr7 (1-283)||(29763422-29763712)
chr7 (283-421)||(29763737-29763875)
chr7 (490-554)||(25887697-25887761)
chr7 (490-554)||(47193041-47193105)
chr7 (490-554)||(155874-155938)
chr7 (490-554)||(45607138-45607202)
chr7 (496-554)||(10591272-10591330)
chr7 (490-545)||(12102611-12102666)
chr7 (362-416)||(26018026-26018080)
chr7 (379-421)||(35857500-35857542)
chr7 (371-421)||(37355127-37355177)
chr7 (372-414)||(40900891-40900933)
chr7 (375-421)||(44175544-44175590)
chr7 (373-414)||(1284411-1284452)
chr7 (490-558)||(19426694-19426762)
chr7 (374-414)||(6655649-6655689)
chr7 (487-531)||(19510273-19510317)
chr7 (376-416)||(47012601-47012641)
chr7 (376-415)||(5068655-5068694)
chr7 (373-420)||(11604709-11604756)
chr7 (487-554)||(21858858-21858925)
chr7 (374-421)||(26904728-26904775)
chr7 (374-421)||(33050181-33050228)
chr7 (375-414)||(49167888-49167927)
chr7 (380-414)||(6699868-6699902)
chr7 (376-409)||(3849487-3849520)
chr7 (376-421)||(11070228-11070273)
chr7 (379-420)||(24249775-24249816)
chr7 (376-421)||(28081808-28081853)
chr7 (376-417)||(35005127-35005168)
chr7 (373-402)||(37848654-37848683)
chr7 (376-421)||(43079658-43079703)
chr7 (371-415)||(2849553-2849597)
chr7 (378-414)||(3143986-3144022)
chr7 (374-414)||(3247067-3247107)
chr7 (376-404)||(9363387-9363415)
chr7 (377-421)||(10014981-10015025)
chr7 (378-414)||(21153052-21153088)
chr7 (374-414)||(23329900-23329940)
chr7 (376-404)||(27070711-27070739)
chr7 (376-404)||(27207574-27207602)
chr7 (374-414)||(31487188-31487228)
chr7 (377-413)||(38218374-38218410)
chr7 (380-420)||(43255594-43255634)
chr7 (377-421)||(48383344-48383388)
[»] chr8 (53 HSPs)
chr8 (490-554)||(11223752-11223816)
chr8 (490-554)||(7325828-7325892)
chr8 (490-554)||(24946116-24946177)
chr8 (490-554)||(14029135-14029200)
chr8 (490-554)||(21648823-21648888)
chr8 (374-421)||(14531619-14531666)
chr8 (373-416)||(28756532-28756575)
chr8 (378-421)||(43186298-43186341)
chr8 (376-414)||(20852919-20852957)
chr8 (379-421)||(41675395-41675437)
chr8 (376-421)||(9314411-9314456)
chr8 (373-414)||(41406889-41406930)
chr8 (490-554)||(38128419-38128483)
chr8 (490-554)||(40102137-40102201)
chr8 (373-413)||(40517266-40517306)
chr8 (376-415)||(6445175-6445214)
chr8 (376-415)||(9079894-9079933)
chr8 (490-545)||(22767244-22767299)
chr8 (379-414)||(28732765-28732800)
chr8 (376-414)||(69624-69662)
chr8 (376-414)||(3950110-3950148)
chr8 (376-406)||(8410385-8410415)
chr8 (371-417)||(12655917-12655963)
chr8 (376-414)||(29913564-29913602)
chr8 (376-414)||(36740314-36740352)
chr8 (372-414)||(41344702-41344744)
chr8 (372-414)||(43873724-43873766)
chr8 (376-413)||(7010685-7010722)
chr8 (376-421)||(18549979-18550024)
chr8 (375-412)||(22960452-22960489)
chr8 (490-554)||(30925547-30925611)
chr8 (376-421)||(30927957-30928002)
chr8 (376-417)||(33115905-33115946)
chr8 (376-421)||(33817156-33817201)
chr8 (376-421)||(37568640-37568685)
chr8 (376-413)||(39259088-39259125)
chr8 (490-554)||(42543373-42543438)
chr8 (490-554)||(45101510-45101574)
chr8 (377-421)||(1268801-1268845)
chr8 (502-554)||(1370188-1370240)
chr8 (376-416)||(4312548-4312588)
chr8 (377-421)||(7118467-7118511)
chr8 (379-415)||(20703516-20703552)
chr8 (377-421)||(20995084-20995128)
chr8 (376-420)||(23952494-23952538)
chr8 (374-406)||(26871044-26871076)
chr8 (373-409)||(30112838-30112874)
chr8 (376-420)||(36064030-36064074)
chr8 (380-416)||(36637811-36637847)
chr8 (489-552)||(38576522-38576586)
chr8 (374-414)||(40723352-40723392)
chr8 (372-416)||(42786691-42786735)
chr8 (376-404)||(44068719-44068747)
[»] chr6 (25 HSPs)
chr6 (490-554)||(24752345-24752409)
chr6 (490-554)||(26378278-26378342)
chr6 (371-417)||(16368077-16368123)
chr6 (372-412)||(21857602-21857642)
chr6 (490-554)||(33720125-33720189)
chr6 (373-420)||(29197721-29197768)
chr6 (376-414)||(7636461-7636499)
chr6 (376-414)||(11635617-11635655)
chr6 (376-414)||(16337103-16337141)
chr6 (375-421)||(25995441-25995487)
chr6 (375-421)||(26094904-26094950)
chr6 (376-414)||(26396508-26396546)
chr6 (377-414)||(736853-736890)
chr6 (376-413)||(2822222-2822259)
chr6 (376-421)||(3339525-3339570)
chr6 (490-554)||(9954662-9954727)
chr6 (373-414)||(12500060-12500101)
chr6 (373-414)||(12507389-12507430)
chr6 (373-414)||(12508800-12508841)
chr6 (376-421)||(17417261-17417306)
chr6 (376-413)||(28670526-28670563)
chr6 (376-416)||(2242053-2242093)
chr6 (374-414)||(16743299-16743339)
chr6 (373-421)||(32746254-32746302)
chr6 (490-554)||(34021065-34021129)
[»] chr5 (53 HSPs)
chr5 (490-554)||(11767883-11767947)
chr5 (490-554)||(14323861-14323925)
chr5 (374-420)||(30420624-30420670)
chr5 (374-415)||(8681841-8681882)
chr5 (376-421)||(27005505-27005550)
chr5 (490-554)||(33567132-33567196)
chr5 (491-554)||(17990329-17990392)
chr5 (376-417)||(25345340-25345381)
chr5 (376-421)||(28501592-28501637)
chr5 (376-421)||(31626102-31626147)
chr5 (377-414)||(34400619-34400656)
chr5 (374-414)||(6538868-6538908)
chr5 (376-416)||(6940181-6940221)
chr5 (490-554)||(20719908-20719972)
chr5 (490-554)||(24431511-24431575)
chr5 (490-554)||(27392595-27392659)
chr5 (376-416)||(32912038-32912078)
chr5 (376-420)||(34693243-34693287)
chr5 (376-420)||(38010872-38010916)
chr5 (375-414)||(19983840-19983879)
chr5 (495-554)||(26660304-26660363)
chr5 (495-554)||(26931896-26931955)
chr5 (377-420)||(30103478-30103521)
chr5 (376-414)||(7144577-7144615)
chr5 (375-413)||(18395110-18395148)
chr5 (376-414)||(27340869-27340907)
chr5 (490-552)||(33243636-33243698)
chr5 (374-416)||(40829412-40829454)
chr5 (490-554)||(1774178-1774240)
chr5 (380-421)||(3154669-3154710)
chr5 (372-421)||(4820151-4820200)
chr5 (376-413)||(7927355-7927392)
chr5 (490-554)||(10232613-10232678)
chr5 (376-421)||(11415908-11415953)
chr5 (376-421)||(20985555-20985600)
chr5 (375-420)||(27440478-27440523)
chr5 (375-416)||(34124620-34124661)
chr5 (376-421)||(35814453-35814498)
chr5 (376-416)||(372415-372455)
chr5 (373-421)||(9933497-9933545)
chr5 (490-553)||(12661840-12661904)
chr5 (374-402)||(17063863-17063891)
chr5 (371-415)||(18511828-18511872)
chr5 (376-416)||(19840017-19840057)
chr5 (376-416)||(19982017-19982057)
chr5 (376-416)||(21012568-21012608)
chr5 (376-420)||(27271078-27271122)
chr5 (376-416)||(27546063-27546103)
chr5 (375-415)||(27931337-27931377)
chr5 (380-416)||(33901927-33901963)
chr5 (376-416)||(33958291-33958331)
chr5 (376-420)||(35464610-35464654)
chr5 (377-421)||(41984307-41984351)
[»] chr2 (52 HSPs)
chr2 (490-554)||(11229214-11229278)
chr2 (490-553)||(43725319-43725382)
chr2 (374-421)||(5095979-5096026)
chr2 (373-416)||(12784430-12784473)
chr2 (374-416)||(3771369-3771411)
chr2 (376-414)||(41353530-41353568)
chr2 (376-421)||(11152725-11152770)
chr2 (375-416)||(21313515-21313556)
chr2 (371-416)||(21738647-21738692)
chr2 (372-421)||(33559635-33559684)
chr2 (490-554)||(5067535-5067598)
chr2 (373-421)||(6328664-6328712)
chr2 (490-554)||(13104593-13104657)
chr2 (375-415)||(30416359-30416399)
chr2 (490-554)||(32750112-32750176)
chr2 (375-414)||(3924158-3924197)
chr2 (378-421)||(5962640-5962683)
chr2 (374-421)||(13850210-13850257)
chr2 (487-554)||(14714097-14714164)
chr2 (374-421)||(18749389-18749436)
chr2 (374-417)||(23048113-23048156)
chr2 (379-414)||(41212949-41212984)
chr2 (379-414)||(45693501-45693536)
chr2 (376-414)||(2013318-2013356)
chr2 (376-406)||(18373847-18373877)
chr2 (376-414)||(34442113-34442151)
chr2 (375-417)||(35334519-35334561)
chr2 (376-406)||(37601226-37601256)
chr2 (375-413)||(38257327-38257365)
chr2 (376-421)||(3196113-3196158)
chr2 (376-421)||(7595264-7595309)
chr2 (376-421)||(12256901-12256946)
chr2 (376-417)||(18508078-18508119)
chr2 (376-421)||(27307257-27307302)
chr2 (379-416)||(32869829-32869866)
chr2 (376-421)||(34144577-34144622)
chr2 (376-421)||(35171252-35171297)
chr2 (373-414)||(36816449-36816490)
chr2 (376-421)||(40371119-40371164)
chr2 (379-416)||(43691018-43691055)
chr2 (376-421)||(44484682-44484727)
chr2 (490-554)||(2013178-2013242)
chr2 (376-416)||(4319769-4319809)
chr2 (379-415)||(5361798-5361834)
chr2 (490-554)||(7086017-7086081)
chr2 (376-416)||(9634467-9634507)
chr2 (376-420)||(13553147-13553191)
chr2 (376-420)||(23391072-23391116)
chr2 (490-554)||(25801704-25801768)
chr2 (377-421)||(34373006-34373050)
chr2 (377-417)||(38246781-38246821)
chr2 (376-420)||(38571939-38571983)
[»] chr1 (60 HSPs)
chr1 (490-554)||(30631738-30631802)
chr1 (487-551)||(20288235-20288299)
chr1 (490-550)||(35846216-35846276)
chr1 (376-421)||(36669396-36669441)
chr1 (371-416)||(45863752-45863797)
chr1 (373-414)||(49699785-49699826)
chr1 (490-554)||(39010928-39010992)
chr1 (374-421)||(29362718-29362765)
chr1 (374-421)||(30547353-30547400)
chr1 (371-414)||(45350128-45350171)
chr1 (374-420)||(40118742-40118788)
chr1 (376-414)||(43755711-43755749)
chr1 (376-414)||(48678986-48679024)
chr1 (376-420)||(2854987-2855031)
chr1 (374-414)||(6841787-6841827)
chr1 (377-421)||(26839383-26839427)
chr1 (376-416)||(29706734-29706774)
chr1 (376-420)||(32873341-32873385)
chr1 (376-412)||(35026891-35026927)
chr1 (490-554)||(40610343-40610407)
chr1 (376-420)||(49645362-49645406)
chr1 (377-416)||(1922456-1922495)
chr1 (371-414)||(13078983-13079026)
chr1 (376-415)||(26101394-26101433)
chr1 (490-553)||(31290102-31290165)
chr1 (375-414)||(42615859-42615898)
chr1 (376-414)||(586899-586937)
chr1 (379-421)||(835874-835916)
chr1 (375-421)||(3919299-3919345)
chr1 (376-414)||(23554751-23554789)
chr1 (380-414)||(25586559-25586593)
chr1 (379-421)||(25994942-25994984)
chr1 (375-421)||(25995459-25995505)
chr1 (371-421)||(26585199-26585249)
chr1 (375-409)||(31847223-31847257)
chr1 (378-416)||(32926261-32926299)
chr1 (375-421)||(34157805-34157851)
chr1 (375-413)||(37690428-37690466)
chr1 (375-416)||(5771779-5771820)
chr1 (490-554)||(7503579-7503644)
chr1 (371-416)||(11947790-11947835)
chr1 (376-421)||(27352630-27352675)
chr1 (376-421)||(29489385-29489430)
chr1 (490-554)||(31703373-31703437)
chr1 (373-402)||(37669395-37669424)
chr1 (373-406)||(40139123-40139156)
chr1 (377-414)||(41029029-41029066)
chr1 (376-420)||(7371975-7372019)
chr1 (376-416)||(12306165-12306205)
chr1 (371-415)||(15419248-15419292)
chr1 (374-402)||(16836149-16836177)
chr1 (376-416)||(26159441-26159481)
chr1 (374-414)||(27357505-27357545)
chr1 (374-402)||(28457392-28457420)
chr1 (376-416)||(30535991-30536031)
chr1 (376-416)||(33125354-33125394)
chr1 (490-554)||(36690465-36690529)
chr1 (490-554)||(36706566-36706630)
chr1 (376-420)||(41885721-41885765)
chr1 (377-421)||(52714979-52715023)
[»] scaffold0508 (1 HSPs)
scaffold0508 (490-554)||(11429-11493)
[»] chr4 (70 HSPs)
chr4 (376-420)||(54801514-54801558)
chr4 (487-554)||(40409059-40409126)
chr4 (379-420)||(19879776-19879817)
chr4 (490-554)||(39241195-39241260)
chr4 (374-414)||(30866351-30866391)
chr4 (374-421)||(3475867-3475914)
chr4 (372-414)||(35332702-35332744)
chr4 (372-414)||(40335785-40335827)
chr4 (376-421)||(24235320-24235365)
chr4 (490-554)||(31240762-31240827)
chr4 (490-551)||(31658033-31658094)
chr4 (374-415)||(40258203-40258244)
chr4 (490-554)||(5123483-5123547)
chr4 (373-421)||(32901326-32901374)
chr4 (376-416)||(39158105-39158145)
chr4 (373-416)||(149516-149559)
chr4 (377-420)||(2615155-2615198)
chr4 (374-421)||(9032778-9032825)
chr4 (375-414)||(29384230-29384269)
chr4 (490-545)||(38844392-38844447)
chr4 (379-414)||(40308444-40308479)
chr4 (488-554)||(41952940-41953007)
chr4 (372-402)||(3078953-3078983)
chr4 (367-421)||(3222980-3223034)
chr4 (376-414)||(12074184-12074222)
chr4 (376-414)||(23094376-23094414)
chr4 (376-414)||(28203392-28203430)
chr4 (376-410)||(31559538-31559572)
chr4 (376-414)||(31804362-31804400)
chr4 (376-414)||(35661630-35661668)
chr4 (376-414)||(36444428-36444466)
chr4 (374-416)||(46282404-46282446)
chr4 (374-420)||(46480531-46480577)
chr4 (375-417)||(51160667-51160709)
chr4 (376-421)||(1987739-1987784)
chr4 (379-416)||(14113646-14113683)
chr4 (376-421)||(15638161-15638206)
chr4 (376-421)||(24088590-24088635)
chr4 (373-402)||(28899249-28899278)
chr4 (376-417)||(32392249-32392290)
chr4 (380-421)||(33484134-33484175)
chr4 (375-404)||(36123503-36123532)
chr4 (490-554)||(36792446-36792511)
chr4 (376-421)||(40721990-40722035)
chr4 (376-421)||(41609705-41609750)
chr4 (376-421)||(44368228-44368273)
chr4 (376-421)||(45521605-45521650)
chr4 (377-414)||(45548817-45548854)
chr4 (376-421)||(47105911-47105956)
chr4 (376-421)||(51107467-51107512)
chr4 (376-421)||(52669635-52669680)
chr4 (367-420)||(53384354-53384407)
chr4 (376-416)||(2738299-2738339)
chr4 (374-414)||(2788601-2788641)
chr4 (374-402)||(4550332-4550360)
chr4 (377-421)||(6686047-6686091)
chr4 (490-554)||(16004220-16004283)
chr4 (376-416)||(21392570-21392610)
chr4 (490-554)||(25523089-25523153)
chr4 (490-554)||(28480431-28480495)
chr4 (490-554)||(28481305-28481369)
chr4 (490-554)||(28482180-28482244)
chr4 (377-413)||(32464638-32464674)
chr4 (374-402)||(39881075-39881103)
chr4 (375-415)||(42178082-42178122)
chr4 (380-412)||(44134347-44134379)
chr4 (377-413)||(46523676-46523711)
chr4 (376-416)||(53463101-53463141)
chr4 (380-416)||(54921693-54921729)
chr4 (374-414)||(55960187-55960227)
[»] chr3 (55 HSPs)
chr3 (490-554)||(51672977-51673041)
chr3 (490-554)||(7231899-7231963)
chr3 (490-554)||(7293992-7294056)
chr3 (490-554)||(20380782-20380846)
chr3 (366-421)||(1402640-1402695)
chr3 (373-416)||(9311037-9311080)
chr3 (490-545)||(37215133-37215188)
chr3 (376-415)||(39901591-39901630)
chr3 (366-417)||(44910687-44910738)
chr3 (374-421)||(52100259-52100306)
chr3 (373-415)||(51230640-51230682)
chr3 (376-414)||(52727481-52727519)
chr3 (490-554)||(6126568-6126633)
chr3 (379-420)||(29222427-29222468)
chr3 (375-420)||(29525232-29525277)
chr3 (377-414)||(40419675-40419712)
chr3 (376-421)||(53473610-53473655)
chr3 (376-416)||(349444-349484)
chr3 (376-420)||(48205045-48205089)
chr3 (374-421)||(11327106-11327153)
chr3 (376-415)||(21239110-21239149)
chr3 (379-414)||(22836228-22836263)
chr3 (375-414)||(28300285-28300324)
chr3 (379-414)||(29373924-29373959)
chr3 (375-414)||(32622396-32622435)
chr3 (487-554)||(37303494-37303561)
chr3 (376-414)||(27198193-27198231)
chr3 (376-414)||(35755984-35756022)
chr3 (375-421)||(47141626-47141672)
chr3 (376-414)||(47849672-47849710)
chr3 (375-421)||(50280113-50280159)
chr3 (376-421)||(7240-7285)
chr3 (375-420)||(4189736-4189781)
chr3 (376-421)||(16267923-16267968)
chr3 (376-417)||(20549415-20549456)
chr3 (376-421)||(27646498-27646543)
chr3 (490-554)||(31249214-31249279)
chr3 (371-416)||(34057984-34058029)
chr3 (376-421)||(49761212-49761257)
chr3 (384-413)||(49840111-49840140)
chr3 (376-421)||(53932417-53932462)
chr3 (376-420)||(7351665-7351709)
chr3 (374-406)||(19418198-19418230)
chr3 (374-414)||(20893275-20893315)
chr3 (373-413)||(23869001-23869041)
chr3 (376-416)||(24095437-24095477)
chr3 (490-554)||(28269920-28269984)
chr3 (495-554)||(31997921-31997981)
chr3 (375-415)||(34663103-34663143)
chr3 (490-554)||(41111965-41112029)
chr3 (490-554)||(42475870-42475934)
chr3 (376-416)||(42683827-42683867)
chr3 (373-421)||(43441669-43441717)
chr3 (376-420)||(43499588-43499632)
chr3 (380-416)||(44080670-44080706)
[»] scaffold0501 (1 HSPs)
scaffold0501 (490-554)||(10409-10473)
[»] scaffold0178 (1 HSPs)
scaffold0178 (373-416)||(9773-9816)
[»] scaffold0154 (1 HSPs)
scaffold0154 (376-414)||(4315-4353)
[»] scaffold0011 (1 HSPs)
scaffold0011 (375-421)||(18594-18640)
[»] scaffold0004 (1 HSPs)
scaffold0004 (376-421)||(249168-249213)
[»] scaffold0514 (1 HSPs)
scaffold0514 (372-420)||(1872-1920)
[»] scaffold0121 (1 HSPs)
scaffold0121 (379-415)||(3955-3991)
[»] scaffold0115 (1 HSPs)
scaffold0115 (374-402)||(35543-35571)


Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-121; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 29763422 - 29763712
Alignment:
Q  1 aaagtctgactaatgattgttctagtcatgatttttactaggattttcctaaacgttttttctttaactgaaattcattaaccaattaaattaaactact 100  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  29763422 aaagtctgactaatgactgttatagtcatgattttttctaggattttcctaaacgttttttctttaactgaaattcattaa-caattaagttaaactact 29763520  T
Q  101 tgattcactgaaatgaagttagataaggcaaaatctattatgatatac-----------accaaacacatgctaacaattttgttggaagaaaaataaga 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||    
T  29763521 tgattcactgaaatgaagttagataaggcaaaatctattatgatatacgctaccgtaaaaccaaacacatgctaacaattttgttggaagaaaaataaga 29763620  T
Q  190 aagggggtctttaaatttttatattttgcaacaaatacttaatattcatctcttaatatctagaaaatagaagtttatagagggaatcacgtga 283  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29763621 aa--gggtctttaaatttttatattttgcaacaaatacttaatattcatctcttaatatctagaaaatagaagtttatagagggaatcacgtga 29763712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 283 - 421
Target Start/End: Original strand, 29763737 - 29763875
Alignment:
Q  283 aatgaaatgtaaagaatatatgtcacaagtttcctcactttctattagagcaatattctccattgttaattgatgaaagcaatatttcattatgagaaat 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29763737 aatgaaatgtaaagaatatatgtcacaagtttcctcactttctattagagcaatattctccattgttaattgatgaaagcaatatttcattttgagaaat 29763836  T
Q  383 gatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||| |||||| |||||| |||||||||||    
T  29763837 gatatttgtacaaccattttgtgataacttttgtacaac 29763875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 25887697 - 25887761
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||    
T  25887697 caatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcact 25887761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 47193041 - 47193105
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||| ||||||||    
T  47193041 caatgaaaagtgagaaaaaagaagttgtaccaaaagttatctaaaatggttgttcaaatatcact 47193105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 155938 - 155874
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    ||||||||||| |||||||| |||||||| |||||||||||| ||| ||||||||| ||||||||    
T  155938 caatgaaaagtaagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcact 155874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 45607138 - 45607202
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||||||||||||| ||||||||||||||||| ||| |||  |||||||| ||||||||    
T  45607138 caatgaaaagtgagaaaaaagaagttgtaccaaaagttatctaaaatagttgttcaaatatcact 45607202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 496 - 554
Target Start/End: Original strand, 10591272 - 10591330
Alignment:
Q  496 aaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||||||| |||||||  |||||||||||||||| ||||||||| ||||||||    
T  10591272 aaagtgagaaaaaagaagttgtcacaaaagttgtctcaaatggttgttcaaatatcact 10591330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 490 - 545
Target Start/End: Complemental strand, 12102666 - 12102611
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttca 545  Q
    |||||||||| |||||||||||||||||  |||||||||||| ||| |||||||||    
T  12102666 caatgaaaagagagaaaaaataagttgtcacaaaagttgtctgaaatggttgttca 12102611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 416
Target Start/End: Original strand, 26018026 - 26018080
Alignment:
Q  362 caatatttcattatgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||| |||| || |||||||||||||||||||||||||| |||| ||||||    
T  26018026 caatatttaattaagataaatgatatttgtacaatcattttataataacttttgt 26018080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 421
Target Start/End: Original strand, 35857500 - 35857542
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  35857500 aaatgatatttgtacaattaatttatgataatttttgtacaac 35857542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 37355127 - 37355177
Alignment:
Q  371 attatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||| |||||| |||||| |||||||||||||||||| |||||    
T  37355127 attatgagaaataatatttatacaattattttatgataatttttgaacaac 37355177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 40900891 - 40900933
Alignment:
Q  372 ttatgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  40900891 ttatgagaaatgatatttgtataatcattttacgataattttt 40900933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 44175544 - 44175590
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||    
T  44175544 tgagaaataatatttgtacaatcattttgtgataacttttgtacaac 44175590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 373 - 414
Target Start/End: Original strand, 1284411 - 1284452
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||| ||||||||||||||||||| |||||||||||    
T  1284411 tatgagaaataatatttgtacaatcattttttgataattttt 1284452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 490 - 558
Target Start/End: Original strand, 19426694 - 19426762
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcacttctc 558  Q
    |||||||||| ||||||||| ||||||| |||||||||||| | ||| ||||||||| ||||||||||||    
T  19426694 caatgaaaagagagaaaaaa-aagttgtcaccaaaagttgtatgaaatggttgttcaaatatcacttctc 19426762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 414
Target Start/End: Complemental strand, 6655689 - 6655649
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  6655689 atgagaaatgatatttgtaaaatcattttgtgataattttt 6655649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 531
Target Start/End: Complemental strand, 19510317 - 19510273
Alignment:
Q  487 gatcaatgaaaagtgagaaaaaataagttgtaccaaaagttgtct 531  Q
    ||||||||||||| |||||||||||||||||  ||||||||||||    
T  19510317 gatcaatgaaaagagagaaaaaataagttgttacaaaagttgtct 19510273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 47012641 - 47012601
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  47012641 gagaaatgatatttgtacaatcattttctaataatttttgt 47012601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 415
Target Start/End: Complemental strand, 5068694 - 5068655
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  5068694 gagaaatgatatttgtacaaccattttatgataacttttg 5068655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 420
Target Start/End: Complemental strand, 11604756 - 11604709
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||| |||||||||||||||||  |||||||||||||||||| ||||    
T  11604756 tatgataaatgatatttgtacaaaaattttatgataatttttgaacaa 11604709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 554
Target Start/End: Original strand, 21858858 - 21858925
Alignment:
Q  487 gatcaatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||||||||| |||||| ||||| |  |||||||||| | ||| ||||||||| ||||||||    
T  21858858 gatcaatgaaaagtgaaaaaaaagaagttatcacaaaagttgtttaaaatggttgttcaaatatcact 21858925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 26904775 - 26904728
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||  |||||||||||| ||||||||||||||||||| |||||    
T  26904775 atgagaaaatatatttgtacaaccattttatgataatttttggacaac 26904728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 33050181 - 33050228
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||| |||||| ||| || |||||||||||    
T  33050181 atgagaaatgatatttgtacaaccattttgtgacaacttttgtacaac 33050228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 414
Target Start/End: Complemental strand, 49167927 - 49167888
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  49167927 tgagaaatgatatttgtacaattattttgtgataattttt 49167888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 414
Target Start/End: Complemental strand, 6699902 - 6699868
Alignment:
Q  380 aatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||||||| |||||||    
T  6699902 aatgatatttgtacaatcattttatgacaattttt 6699868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 409
Target Start/End: Complemental strand, 3849520 - 3849487
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataa 409  Q
    ||||||||||||||||||| ||||||||||||||    
T  3849520 gagaaatgatatttgtacagtcattttatgataa 3849487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 11070228 - 11070273
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||||||  |||| |||||||||||    
T  11070228 gagaaatgatatttgtacaaccattttagtataacttttgtacaac 11070273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Complemental strand, 24249816 - 24249775
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||| |||||||||||||| |||||||||| ||||    
T  24249816 aaatgatatttatacaatcattttataataatttttgaacaa 24249775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 28081853 - 28081808
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||||| | ||||||||| ||||||    
T  28081853 gagaaatgatatttgtacaaccattttgtaataatttttttacaac 28081808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 417
Target Start/End: Complemental strand, 35005168 - 35005127
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgta 417  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||    
T  35005168 gagaaatgatatttgtacaatcaatttttgagaatttttgta 35005127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 402
Target Start/End: Complemental strand, 37848683 - 37848654
Alignment:
Q  373 tatgagaaatgatatttgtacaatcatttt 402  Q
    ||||||||||||||||||||||||||||||    
T  37848683 tatgagaaatgatatttgtacaatcatttt 37848654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 43079703 - 43079658
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| || ||| |||||||||||| |||||    
T  43079703 gagaaatgatatttgtacaaccactttgtgataatttttggacaac 43079658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 2849597 - 2849553
Alignment:
Q  371 attatgagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    |||| ||||||||||||||||||||| ||||| |||||| |||||    
T  2849597 attaagagaaatgatatttgtacaattattttttgataacttttg 2849553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 414
Target Start/End: Complemental strand, 3144022 - 3143986
Alignment:
Q  378 gaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  3144022 gaaataatatttgtacaatcattttataataattttt 3143986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 414
Target Start/End: Original strand, 3247067 - 3247107
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||||||||  ||| |||||||    
T  3247067 atgagaaatgatatttgtacaatcatttagtgacaattttt 3247107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 404
Target Start/End: Original strand, 9363387 - 9363415
Alignment:
Q  376 gagaaatgatatttgtacaatcattttat 404  Q
    |||||||||||||||||||||||||||||    
T  9363387 gagaaatgatatttgtacaatcattttat 9363415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 10015025 - 10014981
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||  ||||||||||||| |||| |||||    
T  10015025 agaaatgatatttgtacaactattttatgataatatttggacaac 10014981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 414
Target Start/End: Original strand, 21153052 - 21153088
Alignment:
Q  378 gaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||||| | |||||||||    
T  21153052 gaaatgatatttgtacaatcattttctaataattttt 21153088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 414
Target Start/End: Original strand, 23329900 - 23329940
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||| |||||||||| |||||||| |||||||||    
T  23329900 atgagaaatgacatttgtacaaccattttattataattttt 23329940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 404
Target Start/End: Complemental strand, 27070739 - 27070711
Alignment:
Q  376 gagaaatgatatttgtacaatcattttat 404  Q
    |||||||||||||||||||||||||||||    
T  27070739 gagaaatgatatttgtacaatcattttat 27070711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 404
Target Start/End: Original strand, 27207574 - 27207602
Alignment:
Q  376 gagaaatgatatttgtacaatcattttat 404  Q
    |||||||||||||||||||||||||||||    
T  27207574 gagaaatgatatttgtacaatcattttat 27207602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 414
Target Start/End: Original strand, 31487188 - 31487228
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||  ||||| |||||||||||||||||    
T  31487188 atgagaaatgatatttcaacaattattttatgataattttt 31487228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 413
Target Start/End: Complemental strand, 38218410 - 38218374
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttt 413  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  38218410 agaaatgatatttgtacaatcattttgtgacaatttt 38218374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 420
Target Start/End: Complemental strand, 43255634 - 43255594
Alignment:
Q  380 aatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||||||||| ||||| ||| |||||||||||||    
T  43255634 aatgatatttgtacaattattttgtgacaatttttgtacaa 43255594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 48383388 - 48383344
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||| |||||||| | ||||||| ||||||    
T  48383388 agaaatgatatttgtacaaccattttattacaatttttatacaac 48383344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 4e-21; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 11223816 - 11223752
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||    
T  11223816 caatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctcaaaagattgttcaaatatcact 11223752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 7325828 - 7325892
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    ||||||||||||||||||||||| |||||||||||||| ||| ||| ||||||||| ||||||||    
T  7325828 caatgaaaagtgagaaaaaataatttgtaccaaaagttatctaaaatggttgttcaaatatcact 7325892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 24946116 - 24946177
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    ||||||||||||||||||||   ||||||||||||||||||| ||| ||||||||| ||||||||    
T  24946116 caatgaaaagtgagaaaaaa---gttgtaccaaaagttgtctaaaatggttgttcaaatatcact 24946177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 14029200 - 14029135
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| |||||||||||| |||||||||||||||||| ||||||| | ||||||||    
T  14029200 caatgaaaagagagagaaaataagttgtcaccaaaagttgtctcaaatggttgttaaaatatcact 14029135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 21648888 - 21648823
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| |||||||||||| |||||||||||||||||| ||||||| | ||||||||    
T  21648888 caatgaaaagagagagaaaataagttgtcaccaaaagttgtctcaaatggttgttaaaatatcact 21648823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 14531619 - 14531666
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||    
T  14531619 atgagaaatgatatttgtacaactattttatgataacttttgtacaac 14531666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 28756532 - 28756575
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  28756532 tatgagaaatgatatttgtgcaatcattttataataatttttgt 28756575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 43186298 - 43186341
Alignment:
Q  378 gaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  43186298 gaaatgatatttgtacaattattttgtgataatttttgtacaac 43186341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 20852919 - 20852957
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20852919 gagaaatgatatttgtacaaccattttatgataattttt 20852957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 421
Target Start/End: Complemental strand, 41675437 - 41675395
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  41675437 aaatgatatttgtacaatcattttttgataatttttttacaac 41675395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 9314411 - 9314456
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||    
T  9314411 gagaaatgatatttgtacatccattttatgacaatttttgtacaac 9314456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 373 - 414
Target Start/End: Complemental strand, 41406930 - 41406889
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||||||||||| ||| |||||||    
T  41406930 tatgagaaatgatatttgtacaatcattttttgacaattttt 41406889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 38128483 - 38128419
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||||||||||||| |||||||  ||||| |||| | ||| ||||||||| ||||||||    
T  38128483 caatgaaaagtgagaaaaaagaagttgtcacaaaaattgtttaaaatggttgttcaaatatcact 38128419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 40102137 - 40102201
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| ||||||||||||  |||||||||||||| | ||||||||| ||| ||||    
T  40102137 caatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacact 40102201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 413
Target Start/End: Original strand, 40517266 - 40517306
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataatttt 413  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  40517266 tatgagaaattatatttgtacaaccattttatgataatttt 40517306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 415
Target Start/End: Original strand, 6445175 - 6445214
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  6445175 gagagatgatatttgtacaaccattttatgataatttttg 6445214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 415
Target Start/End: Complemental strand, 9079933 - 9079894
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  9079933 gagaaatgatatttgtacgatcattttatgacaatttttg 9079894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 545
Target Start/End: Original strand, 22767244 - 22767299
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttca 545  Q
    |||||||||| ||||||||| |||||||  |||||||||||||| | |||||||||    
T  22767244 caatgaaaagagagaaaaaagaagttgtcacaaaagttgtctcatacggttgttca 22767299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 414
Target Start/End: Original strand, 28732765 - 28732800
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||| ||||||||||||||||||||||||    
T  28732765 aaatgatatttatacaatcattttatgataattttt 28732800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 69662 - 69624
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  69662 gagaaatgatatttgtacaatcactttgtgataattttt 69624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 3950110 - 3950148
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  3950110 gagaaatgatatttgtacaaccattttattataattttt 3950148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 406
Target Start/End: Complemental strand, 8410415 - 8410385
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatga 406  Q
    |||||||||||||||||||||||||||||||    
T  8410415 gagaaatgatatttgtacaatcattttatga 8410385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 417
Target Start/End: Original strand, 12655917 - 12655963
Alignment:
Q  371 attatgagaaatgatatttgtacaatcattttatgataatttttgta 417  Q
    |||| |||||||||||||||||||| |||||||| |||| |||||||    
T  12655917 attaagagaaatgatatttgtacaaccattttataataacttttgta 12655963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 29913564 - 29913602
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  29913564 gagaaatgatatttgtacaactattttatgataattttt 29913602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 36740314 - 36740352
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  36740314 gagaaatgatatttgtacaatcatttagtgataattttt 36740352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 41344744 - 41344702
Alignment:
Q  372 ttatgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||    
T  41344744 ttatgagaaatgatatttgtacaatcagtttgtgataactttt 41344702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 43873766 - 43873724
Alignment:
Q  372 ttatgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||||| |||||| ||| |||||||    
T  43873766 ttatgagaaatgatatttgtacaaccattttgtgacaattttt 43873724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 413
Target Start/End: Original strand, 7010685 - 7010722
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttt 413  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  7010685 gagaaatgatatttgtacaatcattttttgacaatttt 7010722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 18549979 - 18550024
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||||||||   |||| |||||||||||    
T  18549979 gagaaatgatatttgtacaatcatttttgtataacttttgtacaac 18550024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 412
Target Start/End: Complemental strand, 22960489 - 22960452
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataattt 412  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  22960489 tgagaaatgatatttgtacaaccattttaggataattt 22960452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 30925611 - 30925547
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| ||||||||| ||||||| |||||||||||| | ||| ||||||||| ||||||||    
T  30925611 caatgaaaagagagaaaaaa-aagttgtcaccaaaagttgtataaaatggttgttcaaatatcact 30925547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 30928002 - 30927957
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| || ||| ||| ||||||||||||||    
T  30928002 gagaaatgatatttgtacaaccaatttgtgacaatttttgtacaac 30927957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 417
Target Start/End: Original strand, 33115905 - 33115946
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgta 417  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||    
T  33115905 gagaaatgatatttgtataattattttgtgataatttttgta 33115946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 33817156 - 33817201
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||| ||| | | ||||||||||||||    
T  33817156 gagaaatgatatttgtacaatcaatttgtaacaatttttgtacaac 33817201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 37568685 - 37568640
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||||| ||| ||||||| ||||||    
T  37568685 gagaaatgatatttgtacaaacattttgtgacaatttttatacaac 37568640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 413
Target Start/End: Complemental strand, 39259125 - 39259088
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttt 413  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  39259125 gagaaatgatatttgtacaatcaatttgtgataatttt 39259088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 42543438 - 42543373
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| ||||||||| ||||||| |||||||||||| | ||| |||||||||  |||||||    
T  42543438 caatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaattatcact 42543373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 45101510 - 45101574
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| ||||||||| ||||||| |||||||||||| | ||| ||||||||| ||||||||    
T  45101510 caatgaaaagagagaaaaaa-aagttgtcaccaaaagttgtatgaaatggttgttcaaatatcact 45101574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 1268845 - 1268801
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||||||| | | || |||||||||||    
T  1268845 agaaatgatatttgtacaatcattttgtaagaacttttgtacaac 1268801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 1370240 - 1370188
Alignment:
Q  502 agaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||||||| | |||||| |||||||||| || |||||| ||||||||    
T  1370240 agaaaaaataagtttttccaaaaattgtctcaaatggatgttcaaatatcact 1370188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 4312548 - 4312588
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||| ||||  |||||||||||||||||||    
T  4312548 gagaaatgatatttgaacaactattttatgataatttttgt 4312588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 421
Target Start/End: Original strand, 7118467 - 7118511
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||||||||| |||| | ||||||    
T  7118467 agaaatgatatttgtacaattattttatgatcatttctatacaac 7118511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 20703516 - 20703552
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataatttttg 415  Q
    ||||||||||| || ||||||||||||||||||||||    
T  20703516 aaatgatatttttaaaatcattttatgataatttttg 20703552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 20995128 - 20995084
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||| ||||  |||||||||| ||||||||||||||    
T  20995128 agaaatgatatttatacatccattttatgacaatttttgtacaac 20995084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 420
Target Start/End: Original strand, 23952494 - 23952538
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||||||||||||| ||||| |||| | ||||||||||    
T  23952494 gagaaatgatatttgtacaattattttgtgatgacttttgtacaa 23952538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 406
Target Start/End: Original strand, 26871044 - 26871076
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatga 406  Q
    ||||||||||||||||||||||||| |||||||    
T  26871044 atgagaaatgatatttgtacaatcactttatga 26871076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 30112874 - 30112838
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataa 409  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  30112874 tatgagaaattatatttgtacaatcattttgtgataa 30112838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 420
Target Start/End: Original strand, 36064030 - 36064074
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||||||||||||||||||| ||| || ||||| ||||    
T  36064030 gagaaatgatatttgtacaatcattttgtgacaacttttggacaa 36064074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 416
Target Start/End: Complemental strand, 36637847 - 36637811
Alignment:
Q  380 aatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||||||||||  |||||||||||||    
T  36637847 aatgatatttgtacaatcatttggtgataatttttgt 36637811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 552
Target Start/End: Original strand, 38576522 - 38576586
Alignment:
Q  489 tcaatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatca 552  Q
    ||||||||||| || | |||||||||||| |||||||||||| | ||| ||||||||| ||||||    
T  38576522 tcaatgaaaagagaaagaaaataagttgtcaccaaaagttgtttgaaatggttgttcaaatatca 38576586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 414
Target Start/End: Original strand, 40723352 - 40723392
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  40723352 atgagtaatgatatttgtacaatcatttgatgacaattttt 40723392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 416
Target Start/End: Complemental strand, 42786735 - 42786691
Alignment:
Q  372 ttatgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||||||||||| |||||| | | |||||||||    
T  42786735 ttatgagaaatgatatttgtacaaccattttcttacaatttttgt 42786691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 404
Target Start/End: Original strand, 44068719 - 44068747
Alignment:
Q  376 gagaaatgatatttgtacaatcattttat 404  Q
    |||||||||||||||||||||||||||||    
T  44068719 gagaaatgatatttgtacaatcattttat 44068747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 24752345 - 24752409
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||    
T  24752345 caatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcact 24752409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 26378342 - 26378278
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    ||||||||| |||||||||| |||||||| |||||||||||| ||| ||||||||| ||||||||    
T  26378342 caatgaaaaatgagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcact 26378278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 417
Target Start/End: Complemental strand, 16368123 - 16368077
Alignment:
Q  371 attatgagaaatgatatttgtacaatcattttatgataatttttgta 417  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  16368123 attaagagaaatgatatttgtacaaccattttataataatttttgta 16368077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 412
Target Start/End: Complemental strand, 21857642 - 21857602
Alignment:
Q  372 ttatgagaaatgatatttgtacaatcattttatgataattt 412  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  21857642 ttatgagaaatgatatttgtacaaccattttatgacaattt 21857602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 33720125 - 33720189
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||| ||||||||||| || ||||||||||| || ||| ||| ||||||||| ||||||||    
T  33720125 caatgaaaggtgagaaaaaagaaattgtaccaaaaattatctaaaatggttgttcaaatatcact 33720189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 420
Target Start/End: Original strand, 29197721 - 29197768
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||| |||| ||||||||||||||||||| |||||||||||| ||||    
T  29197721 tatgataaataatatttgtacaatcattttgtgataatttttggacaa 29197768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 7636499 - 7636461
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  7636499 gagaaatgatatttgtacaatcattttataataactttt 7636461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 11635617 - 11635655
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  11635617 gagaaatgatatttgtacaacaattttatgataattttt 11635655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 16337141 - 16337103
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  16337141 gagaaatgatatttgtacaatcactttatgacaattttt 16337103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 25995441 - 25995487
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||| |||||| ||  ||||||||||||||    
T  25995441 tgagaaatgatatttgtacaaccattttgtggcaatttttgtacaac 25995487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 26094904 - 26094950
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||| |||||| ||  ||||||||||||||    
T  26094904 tgagaaatgatatttgtacaaccattttgtggcaatttttgtacaac 26094950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 26396546 - 26396508
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  26396546 gagaaatgatatttgtacaattattttataataattttt 26396508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 414
Target Start/End: Complemental strand, 736890 - 736853
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||  |||||||||||||||||    
T  736890 agaaatgatatttgtacaactattttatgataattttt 736853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 413
Target Start/End: Original strand, 2822222 - 2822259
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttt 413  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  2822222 gagaaatgatatttgtacaaccattttataataatttt 2822259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 3339570 - 3339525
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||||| ||| || |||||||||||    
T  3339570 gagaaatgatatttgtacaaccattttgtgacaacttttgtacaac 3339525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 9954662 - 9954727
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||||| || ||||||| |||||||||||| | ||| ||||||||| ||||||||    
T  9954662 caatgaaaagagagaaagaagaagttgtcaccaaaagttgtattaaatggttgttcaaatatcact 9954727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 414
Target Start/End: Complemental strand, 12500101 - 12500060
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||| ||||||||||| ||| |||||||    
T  12500101 tatgagaaatgatatttgcacaatcattttgtgacaattttt 12500060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 414
Target Start/End: Complemental strand, 12507430 - 12507389
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||| ||||||||||| ||| |||||||    
T  12507430 tatgagaaatgatatttgcacaatcattttgtgacaattttt 12507389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 414
Target Start/End: Original strand, 12508800 - 12508841
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||| ||||||||||| ||| |||||||    
T  12508800 tatgagaaatgatatttgcacaatcattttgtgacaattttt 12508841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 17417306 - 17417261
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||||| | ||| |||||||| |||||    
T  17417306 gagaaatgatatttgtacaatcattatgtgacaatttttggacaac 17417261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 413
Target Start/End: Original strand, 28670526 - 28670563
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttt 413  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  28670526 gagaaatgatatttgtacaaccattttatgatattttt 28670563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 2242093 - 2242053
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||| ||||||||||| ||| |||||||||    
T  2242093 gagaaatgatatttgaacaatcattttttgacaatttttgt 2242053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 414
Target Start/End: Complemental strand, 16743339 - 16743299
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||| |||||| | |||||||||    
T  16743339 atgagaaatgatatttgtacaaccattttttaataattttt 16743299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 32746302 - 32746254
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| ||||| |||   ||||||||||||||||    
T  32746302 tatgagaaatgatatttgtataatcaatttgatataatttttgtacaac 32746254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 34021129 - 34021065
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| |||| |||||||   ||||||||||||||| || |||||| ||||||||    
T  34021129 caatgaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcact 34021065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 1e-18; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 11767947 - 11767883
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||    
T  11767947 caatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcact 11767883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 14323925 - 14323861
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||    
T  14323925 caataaaaagtgagaaaaaagaagttgtaccaaaagttatctcaaaaggttgtttaaatatcact 14323861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 374 - 420
Target Start/End: Original strand, 30420624 - 30420670
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||    
T  30420624 atgagaaatgatatttgtacatccattttatgataatttttgtacaa 30420670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 374 - 415
Target Start/End: Original strand, 8681841 - 8681882
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  8681841 atgagaaatgatatttgtacaatcattttttgataatttttg 8681882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 27005550 - 27005505
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  27005550 gagaaatgatatttgtacaattattttttgataatttttgtacaac 27005505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 33567196 - 33567132
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| ||||||||| || ||||  |||||||||| ||||| ||||||||||||||||||    
T  33567196 caatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcatatatcact 33567132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 491 - 554
Target Start/End: Original strand, 17990329 - 17990392
Alignment:
Q  491 aatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    ||||| |||||||||||||||| ||||  |||||||||||||||| ||||||| | ||||||||    
T  17990329 aatgagaagtgagaaaaaataaattgtcacaaaagttgtctcaaacggttgtttaaatatcact 17990392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 417
Target Start/End: Original strand, 25345340 - 25345381
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgta 417  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  25345340 gagaaatgatatttgtacaattaatttatgataatttttgta 25345381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 28501592 - 28501637
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||    
T  28501592 gagaaatgatatttgtacaaccattttgtgacaatttttgtacaac 28501637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 31626147 - 31626102
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||||||||   ||||||||||||||||    
T  31626147 gagaaatgatatttgtacaatcattttggtataatttttgtacaac 31626102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 414
Target Start/End: Original strand, 34400619 - 34400656
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||||||||||| |||||||    
T  34400619 agaaatgatatttgtacaatcattttatgacaattttt 34400656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 414
Target Start/End: Original strand, 6538868 - 6538908
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  6538868 atgagaaatgatatttgtacaattattttgtgataattttt 6538908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 6940221 - 6940181
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  6940221 gagaaatgatatttgtacaaccattttataataatttttgt 6940181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 20719972 - 20719908
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| |||| |||||||  |||||||||||||||| || |||||| ||||||||    
T  20719972 caatgaaaagagagagaaaagaagttgtcacaaaagttgtctcaaatggatgttcaaatatcact 20719908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 24431575 - 24431511
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| ||||||||  |||||||  ||| |||||||||||| ||||||||| ||||||||    
T  24431575 caatgaaaagagagaaaaatgaagttgtcacaatagttgtctcaaatggttgttcaaatatcact 24431511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 27392659 - 27392595
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| || ||||||||||||||  |||||||||||||| | ||||||||| ||| ||||    
T  27392659 caatgaaaagagaaaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacact 27392595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 32912038 - 32912078
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  32912038 gagaaatgatatttgaacattcattttatgataatttttgt 32912078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 420
Target Start/End: Complemental strand, 34693287 - 34693243
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    |||||||||||||||||||||||||||   |||||||||||||||    
T  34693287 gagaaatgatatttgtacaatcatttttgtataatttttgtacaa 34693243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 420
Target Start/End: Original strand, 38010872 - 38010916
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||||    
T  38010872 gagaaatgatatttgtacaatcaatttgtgataacttttgtacaa 38010916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 414
Target Start/End: Original strand, 19983840 - 19983879
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  19983840 tgagaaatgatatttgtacaattattttatgacaattttt 19983879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 554
Target Start/End: Complemental strand, 26660363 - 26660304
Alignment:
Q  495 aaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||| |||||||||| || |||||||||||||| ||||||||| ||||| | ||||||||    
T  26660363 aaaaatgagaaaaaagaaattgtaccaaaagttatctcaaaagattgtttaaatatcact 26660304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 554
Target Start/End: Complemental strand, 26931955 - 26931896
Alignment:
Q  495 aaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||| |||||||||| || |||||||||||||| ||||||||| ||||| | ||||||||    
T  26931955 aaaaatgagaaaaaagaaattgtaccaaaagttatctcaaaagattgtttaaatatcact 26931896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Complemental strand, 30103521 - 30103478
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||||||||||||||||||   |||||||||||||||    
T  30103521 agaaatgatatttgtacaatcatttttgtataatttttgtacaa 30103478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 7144577 - 7144615
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  7144577 gagaaatgatatttgtacaaccattttatgataactttt 7144615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 413
Target Start/End: Original strand, 18395110 - 18395148
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttt 413  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  18395110 tgagagatgatatttgtacaatcattttatgaaaatttt 18395148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 27340869 - 27340907
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  27340869 gagaaatgatatttgtacaatcactttattataattttt 27340907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 490 - 552
Target Start/End: Complemental strand, 33243698 - 33243636
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatca 552  Q
    |||||||||| |||||||||||| ||||  |||||||| ||| ||| ||||||||| ||||||    
T  33243698 caatgaaaagagagaaaaaataaattgtcacaaaagttatctgaaatggttgttcaaatatca 33243636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 416
Target Start/End: Original strand, 40829412 - 40829454
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||||||||| |||||| | |||||||||||    
T  40829412 atgagaaatgatatttgtacaaccattttttaataatttttgt 40829454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 1774240 - 1774178
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    ||||||||||||| ||||||  ||||||||||||| |||||| |||  |||||||| ||||||||    
T  1774240 caatgaaaagtgaaaaaaaa--agttgtaccaaaaattgtctaaaatagttgttcaaatatcact 1774178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 3154710 - 3154669
Alignment:
Q  380 aatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  3154710 aatgatatttgtacaactattttatgataacttttgtacaac 3154669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 421
Target Start/End: Original strand, 4820151 - 4820200
Alignment:
Q  372 ttatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||||  |||||||||| |  |||||||||||    
T  4820151 ttatgagaaatgatatttgtacatccattttatgacatcttttgtacaac 4820200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 413
Target Start/End: Original strand, 7927355 - 7927392
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttt 413  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  7927355 gagaaatgatatttatacaatcattttgtgataatttt 7927392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 10232613 - 10232678
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| ||||||||| ||||||| |||||||||||| | |||  |||||||| ||||||||    
T  10232613 caatgaaaagagagaaaaaagaagttgtcaccaaaagttgtataaaatagttgttcaaatatcact 10232678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 11415908 - 11415953
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||| ||||||| |||||| |||||| |||||||||||||||||    
T  11415908 gagaaacgatatttctacaattattttaagataatttttgtacaac 11415953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 20985600 - 20985555
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| ||||||   ||||||||||||||||    
T  20985600 gagaaatgatatttgtacaaccatttttgtataatttttgtacaac 20985555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 420
Target Start/End: Original strand, 27440478 - 27440523
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    |||||||||||||||||||||||||||| ||| || ||||| ||||    
T  27440478 tgagaaatgatatttgtacaatcattttgtgacaacttttgaacaa 27440523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 416
Target Start/End: Original strand, 34124620 - 34124661
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||| |||  ||||||||||||||||||||    
T  34124620 tgagaaatgatatttgaacatccattttatgataatttttgt 34124661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 35814453 - 35814498
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||||| |||||| ||| |||||||    
T  35814453 gagaaatgatatttgtacaaccattttgtgataactttggtacaac 35814498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 372455 - 372415
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||||||| |||||||| |||||| ||||    
T  372455 gagaaatgatatttgtacaaccattttataataattgttgt 372415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 373 - 421
Target Start/End: Original strand, 9933497 - 9933545
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||| ||| ||||||||||| || ||||| |||||    
T  9933497 tatgagaaatgatatttgaacattcattttatgacaacttttgaacaac 9933545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 553
Target Start/End: Complemental strand, 12661904 - 12661840
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcac 553  Q
    |||||||||| ||||||||| ||||||| |||||||||||| | |||  |||||||| |||||||    
T  12661904 caatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatagttgttcaaatatcac 12661840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 402
Target Start/End: Original strand, 17063863 - 17063891
Alignment:
Q  374 atgagaaatgatatttgtacaatcatttt 402  Q
    |||||||||||||||||||||||||||||    
T  17063863 atgagaaatgatatttgtacaatcatttt 17063891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 18511872 - 18511828
Alignment:
Q  371 attatgagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    |||| ||||||||||||||| ||| ||||||| ||||||||||||    
T  18511872 attaagagaaatgatatttgaacattcattttgtgataatttttg 18511828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 19840057 - 19840017
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  19840057 gagaaatgatatttgaacattcattttatgacaatttttgt 19840017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 19982057 - 19982017
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||  ||||||||||| |||||||||||||    
T  19982057 gagaaatgatattttaacaatcattttttgataatttttgt 19982017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 21012568 - 21012608
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||| |||||||||||| |||||||||| |||||||||    
T  21012568 gagaaattatatttgtacaaccattttatgacaatttttgt 21012608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 420
Target Start/End: Complemental strand, 27271122 - 27271078
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||||||||| || || ||||||| |||||||||||||    
T  27271122 gagaaatgatatttgtaaaaccaatttatgacaatttttgtacaa 27271078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 27546063 - 27546103
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||| ||||||||||||||| || ||||||    
T  27546063 gagaaatgatatttgaacaatcattttatgacaaattttgt 27546103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 375 - 415
Target Start/End: Original strand, 27931337 - 27931377
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    |||||||| | ||||||||||| ||||||||||||||||||    
T  27931337 tgagaaataaaatttgtacaattattttatgataatttttg 27931377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 416
Target Start/End: Complemental strand, 33901963 - 33901927
Alignment:
Q  380 aatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  33901963 aatgatatttgaacaaccattttatgataatttttgt 33901927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 33958331 - 33958291
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||| |||||||||||  ||||||||||||    
T  33958331 gagaaatgatatttgaacaatcatttttggataatttttgt 33958291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 420
Target Start/End: Complemental strand, 35464654 - 35464610
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    |||||||||||||||||| || ||||| |||||||||||| ||||    
T  35464654 gagaaatgatatttgtacgattattttttgataatttttgaacaa 35464610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 41984351 - 41984307
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||||  | |||||||||||| |||||    
T  41984351 agaaatgatatttgtacaatcataatctgataatttttggacaac 41984307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 1e-18; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 11229278 - 11229214
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||    
T  11229278 caatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcact 11229214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 43725319 - 43725382
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcac 553  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||| |||||||    
T  43725319 caatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcac 43725382  T

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Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 5096026 - 5095979
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  5096026 atgagaaatgatatttgtacaatcattttgtgataatttttggacaac 5095979  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 416
Target Start/End: Complemental strand, 12784473 - 12784430
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  12784473 tatgagaaatgatatttgtacaaccattttataataatttttgt 12784430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 416
Target Start/End: Original strand, 3771369 - 3771411
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  3771369 atgagaaatgatatttgtacaatcattttttaataatttttgt 3771411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 41353568 - 41353530
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  41353568 gagaaatgatatttgtacaatcaatttatgataattttt 41353530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 11152770 - 11152725
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||||||||   ||||||||||||||||    
T  11152770 gagaaatgatatttgtacaatcatttttatataatttttgtacaac 11152725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 375 - 416
Target Start/End: Complemental strand, 21313556 - 21313515
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  21313556 tgagaaatgatatttgtacaatcattctttgataatttttgt 21313515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 21738692 - 21738647
Alignment:
Q  371 attatgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||    
T  21738692 attatgagaaatgatatttgtacaaccattttctaataatttttgt 21738647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 421
Target Start/End: Original strand, 33559635 - 33559684
Alignment:
Q  372 ttatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||||| |||||||  |||||||||| |||||    
T  33559635 ttatgagaaatgatatttgtacaaccattttagtataatttttggacaac 33559684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 5067598 - 5067535
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||||||||||||| |||||| | |||||||||||| ||| | ||||||| ||||||||    
T  5067598 caatgaaaagtgagaaaaaagaagttg-atcaaaagttgtctaaaatgattgttcaaatatcact 5067535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 421
Target Start/End: Original strand, 6328664 - 6328712
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||| ||||||   ||||||||||||||||    
T  6328664 tatgagaaatgatatttgtacaaccattttggtataatttttgtacaac 6328712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 13104593 - 13104657
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||||||||||||||||  ||||| |||||||| | ||||||||| ||| ||||    
T  13104593 caatgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacact 13104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 415
Target Start/End: Original strand, 30416359 - 30416399
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  30416359 tgagaaatgatatttgtacaatcattttttgacaatttttg 30416399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 32750112 - 32750176
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||||||||||||||||  ||||| |||||||| | ||||||||| ||| ||||    
T  32750112 caatgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacact 32750176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 414
Target Start/End: Complemental strand, 3924197 - 3924158
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  3924197 tgagtaatgatatttgtacaattattttatgataattttt 3924158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 5962640 - 5962683
Alignment:
Q  378 gaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||| | |||||||||||| |||||    
T  5962640 gaaatgatatttgtacaatcattatgtgataatttttggacaac 5962683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 13850257 - 13850210
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||| ||||||||||||   ||||||||||||||||    
T  13850257 atgagaaatgatatttatacaatcattttgatataatttttgtacaac 13850210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 554
Target Start/End: Original strand, 14714097 - 14714164
Alignment:
Q  487 gatcaatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    ||||||||||||| |||| |||| |||||||  ||||| |||||||||| || |||||| ||||||||    
T  14714097 gatcaatgaaaagagagagaaaagaagttgtcacaaaaattgtctcaaatggatgttcaaatatcact 14714164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 18749436 - 18749389
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||| ||||||   ||||||||||||||||    
T  18749436 atgagaaatgatatttgtacaaccatttttgtataatttttgtacaac 18749389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 417
Target Start/End: Complemental strand, 23048156 - 23048113
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgta 417  Q
    ||||||||||||||||||||||||| |||  |||||||||||||    
T  23048156 atgagaaatgatatttgtacaatcaatttgagataatttttgta 23048113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 414
Target Start/End: Original strand, 41212949 - 41212984
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||||||| |||||||||    
T  41212949 aaatgatatttgtacaatcattttattataattttt 41212984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 414
Target Start/End: Complemental strand, 45693536 - 45693501
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||| |||||||||||||||||    
T  45693536 aaatgatatttgtacaattattttatgataattttt 45693501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 2013356 - 2013318
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  2013356 gagaaatgatatttgtacattcattttatgacaattttt 2013318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 406
Target Start/End: Original strand, 18373847 - 18373877
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatga 406  Q
    |||||||||||||||||||||||||||||||    
T  18373847 gagaaatgatatttgtacaatcattttatga 18373877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 34442113 - 34442151
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||| || |||||||||||||||    
T  34442113 gagaaatgatatttgtacaaccactttatgataattttt 34442151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 417
Target Start/End: Original strand, 35334519 - 35334561
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgta 417  Q
    ||||||||||||||||||||| |||||||| |||| |||||||    
T  35334519 tgagaaatgatatttgtacaaccattttataataacttttgta 35334561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 406
Target Start/End: Original strand, 37601226 - 37601256
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatga 406  Q
    |||||||||||||||||||||||||||||||    
T  37601226 gagaaatgatatttgtacaatcattttatga 37601256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 413
Target Start/End: Complemental strand, 38257365 - 38257327
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttt 413  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  38257365 tgagaaattatatttgtacattcattttatgataatttt 38257327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 3196158 - 3196113
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||| ||| ||| || |||||||||||    
T  3196158 gagaaatgatatttgtacaatcaatttgtgacaacttttgtacaac 3196113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 7595264 - 7595309
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||| |||||| | ||| ||||||||||||||||||    
T  7595264 gagaaatgatatttatacaataaatttgtgataatttttgtacaac 7595309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 12256901 - 12256946
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||||||||   |||| |||||||||||    
T  12256901 gagaaatgatatttgtacaatcatttttgtataacttttgtacaac 12256946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 417
Target Start/End: Original strand, 18508078 - 18508119
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgta 417  Q
    |||||||||||||||||||  ||||||||||||| |||||||    
T  18508078 gagaaatgatatttgtacatccattttatgataacttttgta 18508119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 27307302 - 27307257
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||| ||| ||| || |||||||||||    
T  27307302 gagaaatgatatttgtacaatcaatttgtgacaacttttgtacaac 27307257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 416
Target Start/End: Original strand, 32869829 - 32869866
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  32869829 aaatgatatttgaacattcattttatgataatttttgt 32869866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 34144622 - 34144577
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| || ||| ||| ||||||||||||||    
T  34144622 gagaaatgatatttgtacaaccaatttgtgacaatttttgtacaac 34144577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 35171297 - 35171252
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||||| ||| |||||| |||||||    
T  35171297 gagaaatgatatttgtacaaccattttgtgacaattttggtacaac 35171252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 414
Target Start/End: Complemental strand, 36816490 - 36816449
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||| |||||  |||||||||||||||||    
T  36816490 tatgagaaatgatatttatacaactattttatgataattttt 36816449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 40371119 - 40371164
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||    
T  40371119 gagaaatgttatttgtacatctattttatgataatttttgtacaac 40371164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 416
Target Start/End: Complemental strand, 43691055 - 43691018
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  43691055 aaatgatatttgttcaattattttatgataatttttgt 43691018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 44484727 - 44484682
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||||| | | ||||||||||||||    
T  44484727 gagaaatgatatttgtacaaccattttgtaacaatttttgtacaac 44484682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 2013242 - 2013178
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| ||||||||||||  ||| |||||||||||| || |||| | ||||||||    
T  2013242 caatgaaaagagagagaaaataagttgtcacaagagttgtctcaaatggatgttaaaatatcact 2013178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 4319769 - 4319809
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||||||||  ||||||| |||||||||||    
T  4319769 gagaaatgatatttgtacaactattttataataatttttgt 4319809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 5361798 - 5361834
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataatttttg 415  Q
    |||||||||||||||||||||||| | ||||||||||    
T  5361798 aaatgatatttgtacaatcattttctaataatttttg 5361834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 7086081 - 7086017
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| ||||||||||||  ||||| |||||||| | ||||||||| ||| ||||    
T  7086081 caatgaaaagagagagaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacact 7086017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 9634507 - 9634467
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||| |||  ||||||||||||||||||||    
T  9634507 gagaaatgatatttgaacatccattttatgataatttttgt 9634467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 420
Target Start/End: Original strand, 13553147 - 13553191
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||    
T  13553147 gagaaatgatatttgtacaaccactttgtgataatttttggacaa 13553191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 420
Target Start/End: Original strand, 23391072 - 23391116
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||||||||||||| | ||| ||||||||||| |||||    
T  23391072 gagaaatgatatttgtacaattaatttgtgataatttttatacaa 23391116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 25801768 - 25801704
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| ||||||||| ||||  |  ||||||||||||||||  |||||||| ||||||||    
T  25801768 caatgaaaagagagaaaaaagaagtgatcacaaaagttgtctcaaattgttgttcaaatatcact 25801704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 421
Target Start/End: Original strand, 34373006 - 34373050
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||    
T  34373006 agaaatgatatttgtacaaccattttggtataatttttgtacaac 34373050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 417
Target Start/End: Complemental strand, 38246821 - 38246781
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttttgta 417  Q
    |||||||||||||||||||||| ||| ||| ||||||||||    
T  38246821 agaaatgatatttgtacaatcaatttgtgacaatttttgta 38246781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 420
Target Start/End: Original strand, 38571939 - 38571983
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||||||||||||||||| ||| | |||||||| ||||    
T  38571939 gagaaatgatatttgtacaatcattatattacaatttttgaacaa 38571983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 1e-18; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 30631802 - 30631738
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||    
T  30631802 caatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcact 30631738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 20288299 - 20288235
Alignment:
Q  487 gatcaatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatc 551  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||| ||| |||||||||||||||    
T  20288299 gatcaataaaaagtgagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcatatatc 20288235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 490 - 550
Target Start/End: Complemental strand, 35846276 - 35846216
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatat 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||| ||||    
T  35846276 caatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatat 35846216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 36669441 - 36669396
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  36669441 gagaaatgatatttgtacaatcaatttgtgataatttttgtacaac 36669396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 45863797 - 45863752
Alignment:
Q  371 attatgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||    
T  45863797 attatgagaaatgatatttgtacaattattttttgataatttttgt 45863752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 373 - 414
Target Start/End: Complemental strand, 49699826 - 49699785
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  49699826 tatgagaaatgatatttgtacaaccattttatgataattttt 49699785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 39010928 - 39010992
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||||||||||||||||  |||||||||||||| | ||||||||| ||| ||||    
T  39010928 caatgaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacact 39010992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 29362765 - 29362718
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||||| ||||||| || |||||||||||    
T  29362765 atgagaaatgatatttgtacaatcaatttatgacaacttttgtacaac 29362718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 30547353 - 30547400
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  30547353 atgagaaatgatatttgtacgatcaatttatgataatttttatacaac 30547400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 414
Target Start/End: Complemental strand, 45350171 - 45350128
Alignment:
Q  371 attatgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||||||| ||||| |||||||||||    
T  45350171 attatgagaaatgatatttgtacaattattttgtgataattttt 45350128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 420
Target Start/End: Complemental strand, 40118788 - 40118742
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    |||||||||||||||||||||||||||||   |||||||||||||||    
T  40118788 atgagaaatgatatttgtacaatcatttttgtataatttttgtacaa 40118742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 43755749 - 43755711
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  43755749 gagaaatgatatttgtacaaccattttatgataattttt 43755711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 48679024 - 48678986
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  48679024 gagaaatgatatttgtacaatcattttatgacaattttt 48678986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 420
Target Start/End: Complemental strand, 2855031 - 2854987
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||    
T  2855031 gagaaatgatatttgtacattcattttatgacaacttttgtacaa 2854987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 414
Target Start/End: Original strand, 6841787 - 6841827
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  6841787 atgagaaatcatatttgtacaaacattttatgataattttt 6841827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 421
Target Start/End: Original strand, 26839383 - 26839427
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||    
T  26839383 agaaatggtatttgtacaaccattttatgataacttttgtacaac 26839427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 29706774 - 29706734
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  29706774 gagaaatgatatttgtacaaccattttatgataacttttgt 29706734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 420
Target Start/End: Original strand, 32873341 - 32873385
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||    
T  32873341 gagaaatgatatttgtacatccattttatgataacttttgtacaa 32873385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 412
Target Start/End: Original strand, 35026891 - 35026927
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattt 412  Q
    ||||||||||||||||| |||||||||||||||||||    
T  35026891 gagaaatgatatttgtataatcattttatgataattt 35026927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 40610343 - 40610407
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| |||| |||||||  |||||||||||||||| || |||||| ||||||||    
T  40610343 caatgaaaagagagagaaaagaagttgtcacaaaagttgtctcaaatggatgttcaaatatcact 40610407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 420
Target Start/End: Original strand, 49645362 - 49645406
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||||||||| ||||||||||||| || ||||||||||    
T  49645362 gagaaatgatatttgtataatcattttatgacaacttttgtacaa 49645406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 416
Target Start/End: Complemental strand, 1922495 - 1922456
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  1922495 agaaatgatatttgtacaatcactttttgataatttttgt 1922456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 414
Target Start/End: Complemental strand, 13079026 - 13078983
Alignment:
Q  371 attatgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||| ||||||||||||| || ||||||||||||||||||    
T  13079026 attatgagtaatgatatttgtagaaccattttatgataattttt 13078983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 415
Target Start/End: Original strand, 26101394 - 26101433
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  26101394 gagaaatgatatttgtacaattattttgtgataatttttg 26101433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 553
Target Start/End: Complemental strand, 31290165 - 31290102
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcac 553  Q
    |||||||||  |||||||||||||||||  |||||||||| | ||| ||||||||| |||||||    
T  31290165 caatgaaaaaagagaaaaaataagttgtcacaaaagttgtgtgaaatggttgttcaaatatcac 31290102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 414
Target Start/End: Original strand, 42615859 - 42615898
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||||||||| | |||||||||    
T  42615859 tgagaaatgatatttgtacaatcattttttaataattttt 42615898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 586899 - 586937
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  586899 gagaaatgatatttgtacaatcactttgtgataattttt 586937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 421
Target Start/End: Original strand, 835874 - 835916
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||||| | | ||||||||||||||    
T  835874 aaatgatatttgtacaatcattttgttacaatttttgtacaac 835916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 3919299 - 3919345
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||| |||||| | |||||||||| |||||    
T  3919299 tgagaaatgatatttgtacaaccattttgttataatttttggacaac 3919345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 23554751 - 23554789
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  23554751 gagaaatgatatttgtacaaccattttttgataattttt 23554789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 414
Target Start/End: Original strand, 25586559 - 25586593
Alignment:
Q  380 aatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||| ||||||||||||    
T  25586559 aatgatatttgtacaatcatttgatgataattttt 25586593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 421
Target Start/End: Complemental strand, 25994984 - 25994942
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||| ||||| |||||||||||| |||||    
T  25994984 aaatgatatttgtacaattattttgtgataatttttggacaac 25994942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 25995459 - 25995505
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||||| ||| ||| || |||||||||||    
T  25995459 tgagaaatgatatttgtacaatcaatttgtgacaagttttgtacaac 25995505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 26585249 - 26585199
Alignment:
Q  371 attatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||| ||||||||||||||||||||  ||||| |||||| |||||||||||    
T  26585249 attaagagaaatgatatttgtacaactattttgtgataacttttgtacaac 26585199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 409
Target Start/End: Complemental strand, 31847257 - 31847223
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataa 409  Q
    ||||||||||||||||||||| |||||||||||||    
T  31847257 tgagaaatgatatttgtacaaccattttatgataa 31847223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 416
Target Start/End: Original strand, 32926261 - 32926299
Alignment:
Q  378 gaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  32926261 gaaatgatatttgaacaatcattttatgataacttttgt 32926299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 34157805 - 34157851
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||| ||| ||||| |||||||||||| |||||    
T  34157805 tgagaaatgatatttgtataattattttgtgataatttttggacaac 34157851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 413
Target Start/End: Original strand, 37690428 - 37690466
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttt 413  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  37690428 tgagaaatgatatttgtacaatcactttatgacaatttt 37690466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 416
Target Start/End: Complemental strand, 5771820 - 5771779
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||| ||||||| ||| |||||||||||||    
T  5771820 tgagaaatgatatttgaacaatcactttttgataatttttgt 5771779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 7503579 - 7503644
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| ||||||||| || |||| |||||||||||| | ||| ||||||||| ||||||||    
T  7503579 caatgaaaagagagaaaaaaaaaattgtcaccaaaagttgtatgaaatggttgttcaaatatcact 7503644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 11947790 - 11947835
Alignment:
Q  371 attatgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||| |||||||||||||||||||| |||||||||| || ||||||    
T  11947790 attaagagaaatgatatttgtacaaccattttatgacaacttttgt 11947835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 27352630 - 27352675
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||||| |||||| ||||| |||||    
T  27352630 gagaaatgatatttgtacaaccattttgtgataacttttggacaac 27352675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 29489430 - 29489385
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||||| |||||| ||| |||||||    
T  29489430 gagaaatgatatttgtacaaccattttgtgataactttggtacaac 29489385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 31703437 - 31703373
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| ||||||||| ||||||| ||||||| |||| | ||| ||||||||||||||||||    
T  31703437 caatgaaaagagagaaaaaa-aagttgtcaccaaaaattgtataaaatggttgttcatatatcact 31703373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 402
Target Start/End: Original strand, 37669395 - 37669424
Alignment:
Q  373 tatgagaaatgatatttgtacaatcatttt 402  Q
    ||||||||||||||||||||||||||||||    
T  37669395 tatgagaaatgatatttgtacaatcatttt 37669424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 406
Target Start/End: Original strand, 40139123 - 40139156
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatga 406  Q
    ||||||||||||||||||||||| ||||||||||    
T  40139123 tatgagaaatgatatttgtacaaccattttatga 40139156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 414
Target Start/End: Complemental strand, 41029066 - 41029029
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  41029066 agaaatgatatttgtacaatcattttgtgataaatttt 41029029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 420
Target Start/End: Complemental strand, 7372019 - 7371975
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||||||||||||  | ||||||| |||||||||||||    
T  7372019 gagaaatgatatttgtacaactaatttatgacaatttttgtacaa 7371975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 12306205 - 12306165
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||||||||| ||||||| | |||||||||    
T  12306205 gagaaatgatatttgtacaattattttataacaatttttgt 12306165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 15419248 - 15419292
Alignment:
Q  371 attatgagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    ||||||||||||||||||||| |||| |||||| ||||| |||||    
T  15419248 attatgagaaatgatatttgtgcaattattttaggataagttttg 15419292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 402
Target Start/End: Complemental strand, 16836177 - 16836149
Alignment:
Q  374 atgagaaatgatatttgtacaatcatttt 402  Q
    |||||||||||||||||||||||||||||    
T  16836177 atgagaaatgatatttgtacaatcatttt 16836149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 26159441 - 26159481
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||| ||||||||||| ||| |||||||||    
T  26159441 gagaaatgatatttgaacaatcattttttgacaatttttgt 26159481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 414
Target Start/End: Original strand, 27357505 - 27357545
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||| ||| ||| |||||||||||||||||    
T  27357505 atgagaaatgatattcgtataattattttatgataattttt 27357545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 402
Target Start/End: Complemental strand, 28457420 - 28457392
Alignment:
Q  374 atgagaaatgatatttgtacaatcatttt 402  Q
    |||||||||||||||||||||||||||||    
T  28457420 atgagaaatgatatttgtacaatcatttt 28457392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 30535991 - 30536031
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||||||||||||||| | | |||||||||    
T  30535991 gagaaatgatatttgtacaatcattttttaacaatttttgt 30536031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 33125394 - 33125354
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||| |||  ||||||||||||||||||||    
T  33125394 gagaaatgatatttgaacatccattttatgataatttttgt 33125354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 36690529 - 36690465
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||  |||| ||||||||||||  |||||||||||||| | ||||||||| ||| ||||    
T  36690529 caatgaaaatagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacact 36690465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 36706630 - 36706566
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||  |||| ||||||||||||  |||||||||||||| | ||||||||| ||| ||||    
T  36706630 caatgaaaatagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacact 36706566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 420
Target Start/End: Original strand, 41885721 - 41885765
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||||||||||||| ||||| ||||| ||||| |||||    
T  41885721 gagaaatgatatttgtacaattattttgtgatagtttttatacaa 41885765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 421
Target Start/End: Original strand, 52714979 - 52715023
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||||||| ||| || |||| ||||||    
T  52714979 agaaatgatatttgtacaatcattttgtgacaacttttttacaac 52715023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 11493 - 11429
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  |||||||| ||||||||    
T  11493 caatgaaaagtgagaaaaaataaattgtatcaaaagttgtctaaaatagttgttcaaatatcact 11429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 376 - 420
Target Start/End: Complemental strand, 54801558 - 54801514
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  54801558 gagaaatgatatttgtacaatcattttattataatttttgtacaa 54801514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 40409126 - 40409059
Alignment:
Q  487 gatcaatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    ||||||| ||||||||||||||| |||||||||||||||||| || |||  |||||||| ||||||||    
T  40409126 gatcaataaaaagtgagaaaaaagaagttgtaccaaaagttggctaaaatagttgttcaaatatcact 40409059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 19879776 - 19879817
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  19879776 aaatgatatttgtacaatcattttatgataatttttgaacaa 19879817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 39241260 - 39241195
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| |||||||||||| |||||||||||||||||| ||||||| | ||||||||    
T  39241260 caatgaaaagagagagaaaataagttgtcaccaaaagttgtctcaaatggttgttaaaatatcact 39241195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 414
Target Start/End: Original strand, 30866351 - 30866391
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  30866351 atgagaaatgatatttgtacaatcattttatgataaatttt 30866391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 3475867 - 3475914
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||| |||||||||| || |||||||||||    
T  3475867 atgagaaatgatatttgtacaaccattttatgacaacttttgtacaac 3475914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 35332702 - 35332744
Alignment:
Q  372 ttatgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  35332702 ttatgagaaatgatatttgtacaaccactttatgataattttt 35332744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 40335785 - 40335827
Alignment:
Q  372 ttatgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  40335785 ttatgagaaatgatatttgtacaatcattttattacaattttt 40335827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 24235320 - 24235365
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  24235320 gagaaatgatatttgtacaatcaatttgtgacaatttttgtacaac 24235365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 31240762 - 31240827
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| ||||||||| ||||||| |||||||||||| | ||| ||||||||| ||||||||    
T  31240762 caatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcact 31240827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 490 - 551
Target Start/End: Original strand, 31658033 - 31658094
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatc 551  Q
    |||||||||||||||||||| |||||||  |||||| ||| ||||| ||||||||| |||||    
T  31658033 caatgaaaagtgagaaaaaagaagttgtcacaaaagctgtatcaaatggttgttcaaatatc 31658094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 374 - 415
Target Start/End: Original strand, 40258203 - 40258244
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  40258203 atgagaaatgatatttatacaaccattttatgataatttttg 40258244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 5123547 - 5123483
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||| ||||| |||||||||||||||||  |||||||||||||| | ||||||||| ||| ||||    
T  5123547 caattaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacact 5123483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 421
Target Start/End: Original strand, 32901326 - 32901374
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||||  ||||| |||||||||||| |||||    
T  32901326 tatgagaaatgatatttgtacaactattttttgataatttttgcacaac 32901374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 39158105 - 39158145
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  39158105 gagaaatgatatttgaacaatcattttttgataatttttgt 39158145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 416
Target Start/End: Complemental strand, 149559 - 149516
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||||| ||||||| ||| |||||||||||||    
T  149559 tatgagaaatgatatttgaacaatcactttttgataatttttgt 149516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Complemental strand, 2615198 - 2615155
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    |||||||||||||||||| | |||||| ||||||||||||||||    
T  2615198 agaaatgatatttgtacatttattttacgataatttttgtacaa 2615155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 9032778 - 9032825
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||||| ||| ||| || |||||||||||    
T  9032778 atgagaaatgatatttgtacaatcaatttgtgacaacttttgtacaac 9032825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 414
Target Start/End: Complemental strand, 29384269 - 29384230
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  29384269 tgagaaatgatatttgtacaatcactttatgacaattttt 29384230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 545
Target Start/End: Complemental strand, 38844447 - 38844392
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttca 545  Q
    |||||||||| |||| ||||||||||||  |||||||||||||| | |||||||||    
T  38844447 caatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttca 38844392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 414
Target Start/End: Original strand, 40308444 - 40308479
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||||||| |||||||||    
T  40308444 aaatgatatttgtacaatcattttataataattttt 40308479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 41952940 - 41953007
Alignment:
Q  488 atcaatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||||| ||||||||| ||||||| |||||||||| | | ||| ||||||||| ||||||||    
T  41952940 atcaatgaaaagagagaaaaaaaaagttgtcaccaaaagttatatgaaatggttgttcaaatatcact 41953007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 402
Target Start/End: Complemental strand, 3078983 - 3078953
Alignment:
Q  372 ttatgagaaatgatatttgtacaatcatttt 402  Q
    |||||||||||||||||||||||||||||||    
T  3078983 ttatgagaaatgatatttgtacaatcatttt 3078953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 421
Target Start/End: Original strand, 3222980 - 3223034
Alignment:
Q  367 tttcattatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||| | ||||||||||||||||||||||| ||| ||| || |||||||||||    
T  3222980 tttcataaagagaaatgatatttgtacaatcaatttgtgacaacttttgtacaac 3223034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 12074222 - 12074184
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  12074222 gagaaatgatatttgtacaaccattttatgacaattttt 12074184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 23094376 - 23094414
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  23094376 gagaaatgatatttgtacaatcattttgtgataactttt 23094414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 28203392 - 28203430
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  28203392 gagaaatgatatttgtacaatcattttgtaataattttt 28203430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 410
Target Start/End: Original strand, 31559538 - 31559572
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataat 410  Q
    ||||||||||||||||||||||||||| |||||||    
T  31559538 gagaaatgatatttgtacaatcattttttgataat 31559572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 31804400 - 31804362
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  31804400 gagaaatgatatttgtacaatcactttgtgataattttt 31804362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 35661668 - 35661630
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  35661668 gagaaatgatatttgtacaaccattttatgacaattttt 35661630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 36444466 - 36444428
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  36444466 gagaaatgatatttgtacaaccattttatgataactttt 36444428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 416
Target Start/End: Complemental strand, 46282446 - 46282404
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||    
T  46282446 atgagtaatgatatttgtacactcatttgatgataatttttgt 46282404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 420
Target Start/End: Complemental strand, 46480577 - 46480531
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||||||||||||||| | ||| || ||||||||||||||    
T  46480577 atgagaaatgatatttgtacaattaatttgtggtaatttttgtacaa 46480531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 417
Target Start/End: Complemental strand, 51160709 - 51160667
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgta 417  Q
    ||||||||||||||||||||| |||||||||| || |||||||    
T  51160709 tgagaaatgatatttgtacaaacattttatgacaacttttgta 51160667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 1987784 - 1987739
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||||||  | ||||||||||||||    
T  1987784 gagaaatgatatttgtacaaccattttagtacaatttttgtacaac 1987739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 416
Target Start/End: Complemental strand, 14113683 - 14113646
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  14113683 aaatgatatttatacaatcattttatgacaatttttgt 14113646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 15638161 - 15638206
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||||||| ||| || ||||| |||||    
T  15638161 gagaaatgatatttgtacaatcattttttgacaacttttgcacaac 15638206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 24088635 - 24088590
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||||||||| || ||||| |||||    
T  24088635 gagaaatgatatttgtacaaccattttatgacaacttttgaacaac 24088590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 402
Target Start/End: Complemental strand, 28899278 - 28899249
Alignment:
Q  373 tatgagaaatgatatttgtacaatcatttt 402  Q
    ||||||||||||||||||||||||||||||    
T  28899278 tatgagaaatgatatttgtacaatcatttt 28899249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 417
Target Start/End: Complemental strand, 32392290 - 32392249
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgta 417  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  32392290 gagaaatgatatttgtgcaatcatattgtgataatttttgta 32392249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 33484175 - 33484134
Alignment:
Q  380 aatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||| |||||| |||||||||||| |||||    
T  33484175 aatgatatttgtacaaccattttgtgataatttttggacaac 33484134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 404
Target Start/End: Complemental strand, 36123532 - 36123503
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttat 404  Q
    ||||||||||||||||||||||||||||||    
T  36123532 tgagaaatgatatttgtacaatcattttat 36123503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 36792446 - 36792511
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| |||| ||||||| |||||||||||| | ||| ||||||||| ||||||||    
T  36792446 caatgaaaagagagagaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcact 36792511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 40722035 - 40721990
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||  |||||||| |||||||||| |||||    
T  40722035 gagaaatgatatttgtacatccattttataataatttttggacaac 40721990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 41609750 - 41609705
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||  |||||||||| || |||||||||||    
T  41609750 gagaaatgatatttgtacatccattttatgacaacttttgtacaac 41609705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 44368273 - 44368228
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||| ||| ||| || |||||||||||    
T  44368273 gagaaatgatatttgtacaatcaatttgtgacaacttttgtacaac 44368228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 45521650 - 45521605
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||  |||||||||| || |||||||||||    
T  45521650 gagaaatgatatttgtacatccattttatgacaacttttgtacaac 45521605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 414
Target Start/End: Complemental strand, 45548854 - 45548817
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  45548854 agaaatgatatttgtacaaccattttgtgataattttt 45548817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 47105911 - 47105956
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||| | ||| |||||| |||||||||||    
T  47105911 gagaaatgatatttgtacaattaatttgtgataacttttgtacaac 47105956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 51107512 - 51107467
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||||||||   |||||||||| |||||    
T  51107512 gagaaatgatatttgtacaatcatttttgtataatttttgcacaac 51107467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 52669680 - 52669635
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| || ||| |||||| |||||||||||    
T  52669680 gagaaatgatatttgtacaaacaatttgtgataacttttgtacaac 52669635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 420
Target Start/End: Complemental strand, 53384407 - 53384354
Alignment:
Q  367 tttcattatgagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    |||| ||| ||||||||||||||||||||||| ||| | |||| ||||||||||    
T  53384407 tttctttaagagaaatgatatttgtacaatcaatttgtaataacttttgtacaa 53384354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 2738339 - 2738299
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||| ||||||||||| ||| |||||||||    
T  2738339 gagaaatgatatttgaacaatcattttttgacaatttttgt 2738299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 414
Target Start/End: Complemental strand, 2788641 - 2788601
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||| |||||||||||||||||||||||||  |||||||||    
T  2788641 atgaaaaatgatatttgtacaatcattttagtataattttt 2788601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 402
Target Start/End: Original strand, 4550332 - 4550360
Alignment:
Q  374 atgagaaatgatatttgtacaatcatttt 402  Q
    |||||||||||||||||||||||||||||    
T  4550332 atgagaaatgatatttgtacaatcatttt 4550360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 421
Target Start/End: Original strand, 6686047 - 6686091
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||| ||||| | ||||||| ||||||||||||||||    
T  6686047 agaaatgatattcgtacatttattttataataatttttgtacaac 6686091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 16004283 - 16004220
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| ||||||||| |||||||  ||| |||||||||||| || |||||| ||||||||    
T  16004283 caatgaaaagagagaaaaaa-aagttgtcacaagagttgtctcaaatggatgttcaaatatcact 16004220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 21392570 - 21392610
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  21392570 gagaaatgatatttgaacaatcattttgtaataatttttgt 21392610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 25523153 - 25523089
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| |||||||||| |  |||||||||||||| | ||||||||| ||| ||||    
T  25523153 caatgaaaagagagagaaaataagttatcacaaaagttgtctcatatggttgttcaaataacact 25523089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 28480495 - 28480431
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| |||| |||||||  ||| ||||||||||||  |||||||| ||||||||    
T  28480495 caatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcact 28480431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 28481369 - 28481305
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| |||| |||||||  ||| ||||||||||||  |||||||| ||||||||    
T  28481369 caatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcact 28481305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 28482244 - 28482180
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| |||| |||||||  ||| ||||||||||||  |||||||| ||||||||    
T  28482244 caatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcact 28482180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 413
Target Start/End: Complemental strand, 32464674 - 32464638
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttt 413  Q
    |||||||||||||||||||  ||||||||||||||||    
T  32464674 agaaatgatatttgtacaactattttatgataatttt 32464638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 402
Target Start/End: Complemental strand, 39881103 - 39881075
Alignment:
Q  374 atgagaaatgatatttgtacaatcatttt 402  Q
    |||||||||||||||||||||||||||||    
T  39881103 atgagaaatgatatttgtacaatcatttt 39881075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 375 - 415
Target Start/End: Complemental strand, 42178122 - 42178082
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    |||||||||||||||||||||||||| | ||| ||||||||    
T  42178122 tgagaaatgatatttgtacaatcattatgtgacaatttttg 42178082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 412
Target Start/End: Complemental strand, 44134379 - 44134347
Alignment:
Q  380 aatgatatttgtacaatcattttatgataattt 412  Q
    |||||||||||||| ||||||||||||||||||    
T  44134379 aatgatatttgtacgatcattttatgataattt 44134347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 413
Target Start/End: Original strand, 46523676 - 46523711
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataatttt 413  Q
    |||||||||||||||||||||| ||||||||||||||    
T  46523676 agaaatgatatttgtacaatca-tttatgataatttt 46523711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 53463141 - 53463101
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||||||| |||||||| | |||||||||    
T  53463141 gagaaatgatatttgtacaaccattttataacaatttttgt 53463101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 416
Target Start/End: Complemental strand, 54921729 - 54921693
Alignment:
Q  380 aatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  54921729 aatgatatttgaacaatcatttgatgataatttttgt 54921693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 414
Target Start/End: Original strand, 55960187 - 55960227
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||| |||||| ||||||| |||||||||    
T  55960187 atgagaaatgatatttatacaattattttattataattttt 55960227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 51672977 - 51673041
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    ||||||||| ||| |||||| ||||||||||||||||||||| ||| ||||||||| ||||||||    
T  51672977 caatgaaaactgaaaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcact 51673041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 7231963 - 7231899
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||||||||||| ||||  |||||||||| ||||| ||||||||| ||||||||    
T  7231963 caatgaaaagagagaaaaaataaattgtcacaaaagttgtatcaaatggttgttcaaatatcact 7231899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 7294056 - 7293992
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    ||||||||| | |||||||| |||||||| |||||||||||| ||| ||||||||| ||||||||    
T  7294056 caatgaaaaataagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcact 7293992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 20380846 - 20380782
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||||||||||||| |||||||  |||||||||| | ||| ||||||||| ||||||||    
T  20380846 caatgaaaagtgagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcact 20380782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 366 - 421
Target Start/End: Original strand, 1402640 - 1402695
Alignment:
Q  366 atttcattatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||| ||||||||||||||||||||||  |||||||||| || |||||||||||    
T  1402640 atttcaatatgagaaatgatatttgtacatccattttatgacaacttttgtacaac 1402695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 9311037 - 9311080
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||||||||||||||||| ||||||| |||||    
T  9311037 tatgagaaatgatatttgtacaatcattttctgataatatttgt 9311080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 490 - 545
Target Start/End: Complemental strand, 37215188 - 37215133
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttca 545  Q
    |||||||||| |||||||||||||||||  |||||||||||||| | |||||||||    
T  37215188 caatgaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttca 37215133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 376 - 415
Target Start/End: Original strand, 39901591 - 39901630
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  39901591 gagaaatgatatttgtacaatcattttttgataatttttg 39901630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 366 - 417
Target Start/End: Original strand, 44910687 - 44910738
Alignment:
Q  366 atttcattatgagaaatgatatttgtacaatcattttatgataatttttgta 417  Q
    ||||||||  ||||||||||||||||||| |||||||||||||| |||||||    
T  44910687 atttcatttagagaaatgatatttgtacattcattttatgataacttttgta 44910738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 52100259 - 52100306
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||    
T  52100259 atgagaaatgatatttgtacaaccattttttaataatttttgtacaac 52100306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 415
Target Start/End: Complemental strand, 51230682 - 51230640
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  51230682 tatgagaaaagatatttgtacaaccattttatgataatttttg 51230640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 52727519 - 52727481
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  52727519 gagaaatgatatttgtacaatcactttatgataattttt 52727481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 6126568 - 6126633
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgta-ccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| ||||||||| |||||||| ||||||||||| | ||| ||||||||| ||||||||    
T  6126568 caatgaaaagagagaaaaaagaagttgtaaccaaaagttgtatgaaatggttgttcaaatatcact 6126633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 379 - 420
Target Start/End: Complemental strand, 29222468 - 29222427
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  29222468 aaatgatatttatacaatcattttatgataatttttgaacaa 29222427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 375 - 420
Target Start/End: Original strand, 29525232 - 29525277
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||    
T  29525232 tgagaaatgatatttgtacattcattttatgacaacttttgtacaa 29525277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 414
Target Start/End: Complemental strand, 40419712 - 40419675
Alignment:
Q  377 agaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||||||| |||||||||||    
T  40419712 agaaatgatatttgtacaatcattttgtgataattttt 40419675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 53473610 - 53473655
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||    
T  53473610 gagaaatgatatttgtacaatcaatttgtgataacttttgtacaac 53473655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 349484 - 349444
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  349484 gagaaatgatatttgtacaaccattttataataatttttgt 349444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 420
Target Start/End: Original strand, 48205045 - 48205089
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    |||||||||||||||||||||||||||   |||||||||||||||    
T  48205045 gagaaatgatatttgtacaatcatttttgtataatttttgtacaa 48205089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 11327106 - 11327153
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||| |||||| ||| || |||||||||||    
T  11327106 atgagaaatgatatttgtacaaccattttgtgacaacttttgtacaac 11327153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 415
Target Start/End: Complemental strand, 21239149 - 21239110
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  21239149 gagaaatgatatttgtacaactattttatgataatttttg 21239110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 414
Target Start/End: Complemental strand, 22836263 - 22836228
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||| ||||||||||||||||||    
T  22836263 aaatgatatttgtacaaccattttatgataattttt 22836228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 414
Target Start/End: Original strand, 28300285 - 28300324
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  28300285 tgagaaatgatatttgtacaaccattttattataattttt 28300324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 414
Target Start/End: Original strand, 29373924 - 29373959
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||||||||||| |||||||    
T  29373924 aaatgatatttgtacaatcattttatgacaattttt 29373959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 414
Target Start/End: Complemental strand, 32622435 - 32622396
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  32622435 tgagaaatgatatttatacaatcattttttgataattttt 32622396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 554
Target Start/End: Original strand, 37303494 - 37303561
Alignment:
Q  487 gatcaatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    ||||||||||||| |||||||||||| ||||  |||||||||||||| |  |||||||| ||| ||||    
T  37303494 gatcaatgaaaagagagaaaaaataaattgtcacaaaagttgtctcatatagttgttcaaataacact 37303561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 27198231 - 27198193
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  27198231 gagaaatgatatttgtacaatcattttttgataactttt 27198193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 35755984 - 35756022
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  35755984 gagaaatgatatttgaacaaccattttatgataattttt 35756022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 47141672 - 47141626
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||| ||||||   ||||||||||||||||    
T  47141672 tgagaaatgatatttgtacaaccattttggtataatttttgtacaac 47141626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 47849672 - 47849710
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  47849672 gagaaatgatatttgtacaaccattttgtgataattttt 47849710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 50280159 - 50280113
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||| |||| ||||| || |||||||||||    
T  50280159 tgagaaatgatatttgtacaaccattctatgacaacttttgtacaac 50280113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 7285 - 7240
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||||||| ||| || ||||| |||||    
T  7285 gagaaatgatatttgtacaatcattttctgacaacttttggacaac 7240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 420
Target Start/End: Original strand, 4189736 - 4189781
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    |||||||||||||||||| ||| ||||| |||||||||||| ||||    
T  4189736 tgagaaatgatatttgtagaattattttgtgataatttttgaacaa 4189781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 16267968 - 16267923
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||| ||||||||| | |||||||||| |||||    
T  16267968 gagaaatgatatttgtataatcattttctaataatttttgaacaac 16267923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 417
Target Start/End: Complemental strand, 20549456 - 20549415
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgta 417  Q
    |||||||||||||||||||   ||||||||||||||||||||    
T  20549456 gagaaatgatatttgtacatctattttatgataatttttgta 20549415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 27646498 - 27646543
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||||||||||   |||||||||| |||||    
T  27646498 gagaaatgatatttgtacaatcattttgcaataatttttggacaac 27646543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 31249279 - 31249214
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| || |||||| ||||||| |||||||||||| | ||| ||||||||| ||||||||    
T  31249279 caatgaaaagagaaaaaaaaaaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcact 31249214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 34058029 - 34057984
Alignment:
Q  371 attatgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||||||| |||  ||||||||||||| ||||||    
T  34058029 attatgagaaatgatatttgaacatccattttatgataacttttgt 34057984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 49761257 - 49761212
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||||| | | ||||||||||||||    
T  49761257 gagaaatgatatttgtacaaccattttctaacaatttttgtacaac 49761212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 413
Target Start/End: Complemental strand, 49840140 - 49840111
Alignment:
Q  384 atatttgtacaatcattttatgataatttt 413  Q
    ||||||||||||||||||||||||||||||    
T  49840140 atatttgtacaatcattttatgataatttt 49840111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 53932462 - 53932417
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    |||||||||||||||||||| |||||| ||| |||||||| |||||    
T  53932462 gagaaatgatatttgtacaaccattttgtgacaatttttggacaac 53932417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 420
Target Start/End: Complemental strand, 7351709 - 7351665
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    |||||||||||||||||||| ||||||   |||||||||||||||    
T  7351709 gagaaatgatatttgtacaaccatttttgtataatttttgtacaa 7351665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 406
Target Start/End: Complemental strand, 19418230 - 19418198
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatga 406  Q
    |||||||||||||||||||||| ||||||||||    
T  19418230 atgagaaatgatatttgtacaaccattttatga 19418198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 414
Target Start/End: Complemental strand, 20893315 - 20893275
Alignment:
Q  374 atgagaaatgatatttgtacaatcattttatgataattttt 414  Q
    ||||||||| |||||||||||| |||||| |||||||||||    
T  20893315 atgagaaataatatttgtacaaccattttgtgataattttt 20893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 373 - 413
Target Start/End: Complemental strand, 23869041 - 23869001
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataatttt 413  Q
    ||||||||||||||||||||||| |||||||| | ||||||    
T  23869041 tatgagaaatgatatttgtacaaccattttataacaatttt 23869001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 24095477 - 24095437
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||| |||  ||||||||||||||||||||    
T  24095477 gagaaatgatatttgaacatccattttatgataatttttgt 24095437  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 28269920 - 28269984
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    ||||||||||  |||||||| |||||||  |||||||||||||| | ||||||||| ||| ||||    
T  28269920 caatgaaaagatagaaaaaagaagttgtcgcaaaagttgtctcatatggttgttcaaataacact 28269984  T

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Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 554
Target Start/End: Original strand, 31997921 - 31997981
Alignment:
Q  495 aaaagtgagaaaaaataagttgt-accaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    ||||| |||| |||| ||||||| | |||||||||||||||| ||||||||| ||||||||    
T  31997921 aaaagagagagaaaagaagttgtcatcaaaagttgtctcaaatggttgttcaaatatcact 31997981  T

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Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 375 - 415
Target Start/End: Complemental strand, 34663143 - 34663103
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttg 415  Q
    ||||||||||||||| |||||  ||||||||||||||||||    
T  34663143 tgagaaatgatatttatacaaatattttatgataatttttg 34663103  T

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Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 41112029 - 41111965
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| |||| |||||||   ||||||||||||||| || |||||| ||||||||    
T  41112029 caatgaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcact 41111965  T

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Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 42475934 - 42475870
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| ||||||||||||||| |  |||||||||||| | | ||||||||| ||| ||||    
T  42475934 caatgaaaagagagaaaaaataagttttcacaaaagttgtcttatatggttgttcaaataacact 42475870  T

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Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 42683827 - 42683867
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||| ||| ||||||| |||||||||||||    
T  42683827 gagaaatgatatttgaacattcattttgtgataatttttgt 42683867  T

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Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 373 - 421
Target Start/End: Original strand, 43441669 - 43441717
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||||| |||| | ||| |||||||| |||||    
T  43441669 tatgagaaatgatatttgtacaaccattatgtgacaatttttgaacaac 43441717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 420
Target Start/End: Complemental strand, 43499632 - 43499588
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    |||||||||||||||||||| || |||||||||| ||||| ||||    
T  43499632 gagaaatgatatttgtacaaccactttatgataacttttggacaa 43499588  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 416
Target Start/End: Original strand, 44080670 - 44080706
Alignment:
Q  380 aatgatatttgtacaatcattttatgataatttttgt 416  Q
    |||||||||||||||||||||| || |||||||||||    
T  44080670 aatgatatttgtacaatcatttaattataatttttgt 44080706  T

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Target: scaffold0501 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 10473 - 10409
Alignment:
Q  490 caatgaaaagtgagaaaaaataagttgtaccaaaagttgtctcaaaaggttgttcatatatcact 554  Q
    |||||||||| |||| ||||||||||||  |||||||||||||| | ||||||||| ||| ||||    
T  10473 caatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacact 10409  T

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Target: scaffold0178 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 9773 - 9816
Alignment:
Q  373 tatgagaaatgatatttgtacaatcattttatgataatttttgt 416  Q
    ||||||||||||||||||||||| |||||| | |||||||||||    
T  9773 tatgagaaatgatatttgtacaaccatttttttataatttttgt 9816  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 4315 - 4353
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataattttt 414  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  4315 gagaaatgatatttgtacaaccattttatgataactttt 4353  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 18594 - 18640
Alignment:
Q  375 tgagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||||||||| || ||| |||||| |||||||||||    
T  18594 tgagaaatgatatttgtacaaccaatttgtgataacttttgtacaac 18640  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 249213 - 249168
Alignment:
Q  376 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 421  Q
    ||||||||||||||| ||||||| ||| |||||| |||||||||||    
T  249213 gagaaatgatatttgcacaatcaatttgtgataacttttgtacaac 249168  T

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Target: scaffold0514 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 420
Target Start/End: Complemental strand, 1920 - 1872
Alignment:
Q  372 ttatgagaaatgatatttgtacaatcattttatgataatttttgtacaa 420  Q
    |||||||||||||||||||||||| ||||||   |||| ||||||||||    
T  1920 ttatgagaaatgatatttgtacaaccatttttgtataacttttgtacaa 1872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 415
Target Start/End: Complemental strand, 3991 - 3955
Alignment:
Q  379 aaatgatatttgtacaatcattttatgataatttttg 415  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  3991 aaatgatatttatacaatcattttgtgataatttttg 3955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 402
Target Start/End: Complemental strand, 35571 - 35543
Alignment:
Q  374 atgagaaatgatatttgtacaatcatttt 402  Q
    |||||||||||||||||||||||||||||    
T  35571 atgagaaatgatatttgtacaatcatttt 35543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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